View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19860_high_4 (Length: 607)
Name: NF19860_high_4
Description: NF19860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19860_high_4 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 540; Significance: 0; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 540; E-Value: 0
Query Start/End: Original strand, 19 - 594
Target Start/End: Complemental strand, 14378394 - 14377819
Alignment:
| Q |
19 |
ctcaacaagtcctacagcaatagacnnnnnnnntcagaaaacgaaacaaggaactaaagatactgaaagttcaatgacaaataaaagttttgttactgac |
118 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14378394 |
ctcaacaagtcctacagcaatagacaaaaaaattcagaaaacgaaacaaggaactaaagatactgaaagttcaatgacaaataaaagttttgttactgac |
14378295 |
T |
|
| Q |
119 |
cttgactaagaagtagaaccatgtcactgtcaagaacagaagttattcgatgcgcaatggtaatgaccgtggagtcagtgaaatgcttcctaagagtttg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14378294 |
cttgactaagaagtagaaccatgtcactgtcaagaacagaagttattcgatgcgcaatggtaatgaccgtggagtcagtgaaatgcttcctaagagtttg |
14378195 |
T |
|
| Q |
219 |
ctgaatcaaattatctgtagctgtatcaactgatgcagttgcttcatcaaggaccaaaatcttgctcttcttaagtagaaccctaccaaggcaaaccaac |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14378194 |
ctgaatcaaattatctgtagctgtatcaactgatgcagttgcttcatcaaggaccaaaatcttgctcttcttaagtagaaccctaccaaggcaaaccaac |
14378095 |
T |
|
| Q |
319 |
tgcctctgacccatgctccaattctcaccattctcactaactataaatcatcaacttcgacattagaaaagtaagtagaaatactatataatccatctga |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
14378094 |
tgcctctgacccatgctccaattctcaccattctcactaactataaatcatcaacttccacattagaaaagtaagtagaaatactatataattcatctga |
14377995 |
T |
|
| Q |
419 |
acttaaatatagcaatactatatatcagttggtctaaatttactatatactccctttggacgtatagatgtacccttttgcttatatttaagtctgcaag |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14377994 |
acttaaatatagcaatactatatatcagttggtctaaatttactatatactccctttggacgtatagatgtacccttttgcttatatttaagtctgcaag |
14377895 |
T |
|
| Q |
519 |
gagtatttatgttcaataaaattagaagacaaacctgaagagtcaagctttccttctttctttctaacttcatctc |
594 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14377894 |
gagtatttatgttcaataaaattagaagacaaacctgaagagtcaagctttccttcattctttctaacttcatctc |
14377819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 82 - 482
Target Start/End: Original strand, 14236896 - 14237301
Alignment:
| Q |
82 |
tgaaagttcaatgacaaataaaagttttgttactgaccttgactaagaagtagaaccatgtcactgtcaagaacagaagttattcgatgcgcaatggtaa |
181 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14236896 |
tgaaagttcaatgacgaataaaagtttt-ttactaaccttgactaagaagtagaaccatatcactgtcaagaacagaagttattcgatgcgcaatggtaa |
14236994 |
T |
|
| Q |
182 |
tgaccgtggagtcagtgaaatgcttcctaagagtttgctgaatcaaattatctgtagctgtatcaactgatgcagttgcttcatcaaggaccaaaatctt |
281 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| |
|
|
| T |
14236995 |
tgaccgtggagtcagtgaaatgcttcctaagagtttgctgaatcaaattatctgtagctgtatcaaccgaagcagttgcttcatcaagcaccaaaatctt |
14237094 |
T |
|
| Q |
282 |
gctcttcttaagtagaaccctaccaaggcaaaccaactgcctctgacccatgctccaattctcaccattctcactaactataaatcatcaacttcgacat |
381 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14237095 |
gctcttcttaagcagaaccctaccaaggcaaaccaactgcctctgacccatgctccaattctcaccattctcactaactataaatcatcaacttccacat |
14237194 |
T |
|
| Q |
382 |
tagaaa------agtaagtagaaatactatataatccatctgaacttaaatatagcaatactatatatcagttggtctaaatttactatatactcccttt |
475 |
Q |
| |
|
||| || || ||||||| ||||||||||||||| ||||||| |||||||||||| | || |||||||||||||||||||||| ||||||||| | |
|
|
| T |
14237195 |
tagcaatatgttcgtgagtagaactactatataatccatatgaacttgaatatagcaataatgtacatcagttggtctaaatttactacatactccctct |
14237294 |
T |
|
| Q |
476 |
ggacgta |
482 |
Q |
| |
|
||||||| |
|
|
| T |
14237295 |
ggacgta |
14237301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 117 - 470
Target Start/End: Original strand, 41434807 - 41435168
Alignment:
| Q |
117 |
accttgactaagaagtagaaccatgtcactgtcaagaacagaagttattcgatgcgcaatggtaatgaccgtggagtcagtgaaatgcttcctaagagtt |
216 |
Q |
| |
|
||||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||| |||||||||| |
|
|
| T |
41434807 |
accttgattaagaagtagaaccatatgactgtcaagaacagaagttattcgatgtgcaatggtaatgacagtagagtcggtgaaatgctgcctaagagtt |
41434906 |
T |
|
| Q |
217 |
tgctgaatcaaattatctgtagctgtatcaactgatgcagttgcttcatcaaggaccaaaatcttgctcttcttaagtagaaccctaccaaggcaaacca |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
41434907 |
tgctgaatcaaattatctgtagctgtatcaactgatgcagtggcttcatcaagcaccaaaatcttgctcttcttaagaagaaccctacctaagcaaacca |
41435006 |
T |
|
| Q |
317 |
actgcctctgacccatgctccaattctcaccattctcactaactat-aaatcatcaacttcgacattag-aaaag-----taagtagaaatactatataa |
409 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| || || ||||||||||||||||| |
|
|
| T |
41435007 |
actgcctttgacccatgctccaattctcaccattctcactaactataaaagaatcaacttccacattagcaataggttcaagagtagaaatactatatac |
41435106 |
T |
|
| Q |
410 |
tccatctgaacttaaatat-agcaatactatatatcagttggtctaaatttactatatactc |
470 |
Q |
| |
|
||| | || |||||| ||| ||||| | || |||| |||||||||||||||||||||||| |
|
|
| T |
41435107 |
tccttatgcacttaagtatgagcaaaaaggtacatcatttggtctaaatttactatatactc |
41435168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 117 - 365
Target Start/End: Original strand, 41448097 - 41448345
Alignment:
| Q |
117 |
accttgactaagaagtagaaccatgtcactgtcaagaacagaagttattcgatgcgcaatggtaatgaccgtggagtcagtgaaatgcttcctaagagtt |
216 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||| |||||||||| |
|
|
| T |
41448097 |
accttgatcaagaagtagaaccatatcactgtcaagaacagaagttattcgatgtgcaatggtaatgacagtagagtccgtgaaatgctgcctaagagtt |
41448196 |
T |
|
| Q |
217 |
tgctgaatcaaattatctgtagctgtatcaactgatgcagttgcttcatcaaggaccaaaatcttgctcttcttaagtagaaccctaccaaggcaaacca |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
41448197 |
tgctgaatcaaattatctgtagctgtatcaactgatgcagttgcttcgtcaagcaccaaaatcttgctcttcttaagaagaaccctacctaagcaaacca |
41448296 |
T |
|
| Q |
317 |
actgcctctgacccatgctccaattctcaccattctcactaactataaa |
365 |
Q |
| |
|
| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41448297 |
attgcctttgacccatgctccaattctcaccattctcactaactataaa |
41448345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 132 - 365
Target Start/End: Original strand, 41441901 - 41442134
Alignment:
| Q |
132 |
tagaaccatgtcactgtcaagaacagaagttattcgatgcgcaatggtaatgaccgtggagtcagtgaaatgcttcctaagagtttgctgaatcaaatta |
231 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| |||||||||||||| || || || ||||||| | ||||||||||||||||||||||||| |
|
|
| T |
41441901 |
tagaaccaaatcactgtcaagaacagaagttattcgatgtgcaatggtaatgacagtagaatccatgaaatgttgcctaagagtttgctgaatcaaatta |
41442000 |
T |
|
| Q |
232 |
tctgtagctgtatcaactgatgcagttgcttcatcaaggaccaaaatcttgctcttcttaagtagaaccctaccaaggcaaaccaactgcctctgaccca |
331 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
41442001 |
tctgtagctgtatcaactgaagcagttgcttcgtcaagcaccaaaatcttgctcttcttaagcagaaccctacctaggcaaaccaactgtctctgaccca |
41442100 |
T |
|
| Q |
332 |
tgctccaattctcaccattctcactaactataaa |
365 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
41442101 |
tgctccagttctcaccattctcactaactataaa |
41442134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 482 - 594
Target Start/End: Original strand, 14237328 - 14237440
Alignment:
| Q |
482 |
atagatgtacccttttgcttatatttaagtctgcaaggagtatttatgttcaataaaattagaagacaaacctgaagagtcaagctttccttctttcttt |
581 |
Q |
| |
|
||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
14237328 |
atagatgtacctttttgcttatattaaagtcttcaaggagtatttatgttcaataaaattagaaaacaaacctgaagagtcaagctttccttctttcttt |
14237427 |
T |
|
| Q |
582 |
ctaacttcatctc |
594 |
Q |
| |
|
||||||||||||| |
|
|
| T |
14237428 |
ctaacttcatctc |
14237440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 489 - 594
Target Start/End: Original strand, 41442310 - 41442415
Alignment:
| Q |
489 |
tacccttttgcttatatttaagtctgcaaggagtatttatgttcaataaaattagaagacaaacctgaagagtcaagctttccttctttctttctaactt |
588 |
Q |
| |
|
|||| ||||| ||||||||||||||| ||| | |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
41442310 |
tacctttttgtttatatttaagtctgacgggattgtttatgtttaacaaaattagaagacaaacctgaagagtcaagctttccttctttctttcgaactt |
41442409 |
T |
|
| Q |
589 |
catctc |
594 |
Q |
| |
|
| |||| |
|
|
| T |
41442410 |
cctctc |
41442415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 518 - 594
Target Start/End: Original strand, 41448457 - 41448533
Alignment:
| Q |
518 |
ggagtatttatgttcaataaaattagaagacaaacctgaagagtcaagctttccttctttctttctaacttcatctc |
594 |
Q |
| |
|
||||| ||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
41448457 |
ggagtgtttgtgttcaacaaaattagaatacaaacctgaagagtcaagctttccttctttctttcgaacttcatctc |
41448533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 536 - 594
Target Start/End: Original strand, 41435258 - 41435316
Alignment:
| Q |
536 |
aaaattagaagacaaacctgaagagtcaagctttccttctttctttctaacttcatctc |
594 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
41435258 |
aaaattagaatacaaacctgaagagtcaagctttccttctttctttcgaacttcgtctc |
41435316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 148 - 343
Target Start/End: Original strand, 32117724 - 32117922
Alignment:
| Q |
148 |
tcaagaacagaagttattcgatgcgcaatggtaatgaccgtggagtcagtgaaatgcttcctaagagtttgctgaatcaaattatctgtagctgtatcaa |
247 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| || |||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
32117724 |
tcaagaatggaagttattcgatgcgcaatggtaatgtaggtagagtcagtgaaatgctgcataagagttggctgaaacaaattatctgtagctgtatcaa |
32117823 |
T |
|
| Q |
248 |
ctgatgcagttgcttcatcaaggaccaaaa---tcttgctcttcttaagtagaaccctaccaaggcaaaccaactgcctctgacccatgctccaattct |
343 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| |||||||||||||||| ||||||||||| ||| |||| | |||||||||||||||||||||||||| |
|
|
| T |
32117824 |
ctgatgcagtggcttcatcaagcaccaaaatcttcttgctcttcttaagcagaaccctacctaggaaaactatctgcctctgacccatgctccaattct |
32117922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 594
Target Start/End: Original strand, 32118060 - 32118163
Alignment:
| Q |
489 |
tacccttttgcttatatttaagtctgcaaggagtatttatgttcaataaaattagaagacaaacctgaagagtcaagctttccttctttctttctaactt |
588 |
Q |
| |
|
|||| ||||||||||||||| ||||| |||||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32118060 |
tacctttttgcttatatttatgtctgaggagagtatttatattcaataaaatt-gaaggcaa-cctgaagagtcaagctttccttctttctttctaactt |
32118157 |
T |
|
| Q |
589 |
catctc |
594 |
Q |
| |
|
|||||| |
|
|
| T |
32118158 |
catctc |
32118163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 100; Significance: 4e-49; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 125 - 356
Target Start/End: Original strand, 22746014 - 22746245
Alignment:
| Q |
125 |
taagaagtagaaccatgtcactgtcaagaacagaagttattcgatgcgcaatggtaatgaccgtggagtcagtgaaatgcttcctaagagtttgctgaat |
224 |
Q |
| |
|
|||| ||||||||||| |||||||||| |||||||||| ||||||| ||||| |||||||| ||| | ||||||||||| | | |||||||||||| || |
|
|
| T |
22746014 |
taagtagtagaaccatatcactgtcaataacagaagtttttcgatgtgcaattgtaatgactgtgcaatcagtgaaatgttgtcgaagagtttgctgtat |
22746113 |
T |
|
| Q |
225 |
caaattatctgtagctgtatcaactgatgcagttgcttcatcaaggaccaaaatcttgctcttcttaagtagaaccctaccaaggcaaaccaactgcctc |
324 |
Q |
| |
|
||||||||| ||||| || |||||||||||||| |||||||| || ||||| | || | |||||||| | || |||||||| || |||||||||||| |
|
|
| T |
22746114 |
caaattatcggtagccgtgtcaactgatgcagtggcttcatctagaaccaagactttatttttcttaagcaacactctaccaagacagaccaactgcctc |
22746213 |
T |
|
| Q |
325 |
tgacccatgctccaattctcaccattctcact |
356 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |
|
|
| T |
22746214 |
tgacccatactccaattctcaccattctcact |
22746245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 135 - 360
Target Start/End: Complemental strand, 22744563 - 22744338
Alignment:
| Q |
135 |
aaccatgtcactgtcaagaacagaagttattcgatgcgcaatggtaatgaccgtggagtcagtgaaatgcttcctaagagtttgctgaatcaaattatct |
234 |
Q |
| |
|
||||||||| ||||| || | ||||| |||| ||| |||||||||||||| ||| | |||| ||||| ||| |||| ||||| ||||| | ||||||| |
|
|
| T |
22744563 |
aaccatgtcgctgtcgaggattgaagtgattctatgagcaatggtaatgactgtgcaatcagaaaaatgtttcttaagtgtttgttgaataatattatct |
22744464 |
T |
|
| Q |
235 |
gtagctgtatcaactgatgcagttgcttcatcaaggaccaaaatcttgctcttcttaagtagaaccctaccaaggcaaaccaactgcctctgacccatgc |
334 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||| |||||||| ||||| |||||||| ||||| | ||| ||||| ||||||||||| |||||||||| |
|
|
| T |
22744463 |
gtagctgtgtcaactgatgcagtagcttcatcaagaaccaaaattttgcttttcttaaggagaacacgaccgaggcacaccaactgcctttgacccatgc |
22744364 |
T |
|
| Q |
335 |
tccaattctcaccattctcactaact |
360 |
Q |
| |
|
||||||| || ||||||||| ||||| |
|
|
| T |
22744363 |
tccaattttctccattctcagtaact |
22744338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 133 - 360
Target Start/End: Original strand, 22665940 - 22666167
Alignment:
| Q |
133 |
agaaccatgtcactgtcaagaacagaagttattcgatgcgcaatggtaatgaccgtggagtcagtgaaatgcttcctaagagtttgctgaatcaaattat |
232 |
Q |
| |
|
||||||||||| |||||||| | ||||| |||| ||| |||||||||||||| ||| | || | |||||| | | ||| ||||||||||| | ||||| |
|
|
| T |
22665940 |
agaaccatgtcgctgtcaaggattgaagtgattctatgagcaatggtaatgactgtgcaatctgagaaatgttgcttaattgtttgctgaataatattat |
22666039 |
T |
|
| Q |
233 |
ctgtagctgtatcaactgatgcagttgcttcatcaaggaccaaaatcttgctcttcttaagtagaaccctaccaaggcaaaccaactgcctctgacccat |
332 |
Q |
| |
|
|||| || |||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||| | || ||||| |||||||| | ||||||||| |
|
|
| T |
22666040 |
ctgttgccgtatcaactgatgcagttgcttcatcgagcaccaagatcttgcttttcttaagtagaacacgtccgaggcagaccaactgtcgctgacccat |
22666139 |
T |
|
| Q |
333 |
gctccaattctcaccattctcactaact |
360 |
Q |
| |
|
||||||||| || ||||||||| ||||| |
|
|
| T |
22666140 |
gctccaattttctccattctcagtaact |
22666167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 133 - 360
Target Start/End: Original strand, 22722831 - 22723058
Alignment:
| Q |
133 |
agaaccatgtcactgtcaagaacagaagttattcgatgcgcaatggtaatgaccgtggagtcagtgaaatgcttcctaagagtttgctgaatcaaattat |
232 |
Q |
| |
|
||||||||||| |||||||| | ||||| |||| ||| |||||||||||||| ||| | || | |||||| | | ||| ||||||||||| | ||||| |
|
|
| T |
22722831 |
agaaccatgtcgctgtcaaggattgaagtgattctatgagcaatggtaatgactgtgcaatctgagaaatgttgcttaactgtttgctgaataatattat |
22722930 |
T |
|
| Q |
233 |
ctgtagctgtatcaactgatgcagttgcttcatcaaggaccaaaatcttgctcttcttaagtagaaccctaccaaggcaaaccaactgcctctgacccat |
332 |
Q |
| |
|
|||| || |||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||| | || ||||| |||||||| || || ||||| |
|
|
| T |
22722931 |
ctgttgccgtatcaactgatgcagttgcttcatcgagcaccaagatcttgcttttcttaagtagaacacgtccgaggcagaccaactgtctttgccccat |
22723030 |
T |
|
| Q |
333 |
gctccaattctcaccattctcactaact |
360 |
Q |
| |
|
||||||||| || ||||||||| ||||| |
|
|
| T |
22723031 |
gctccaattttctccattctcagtaact |
22723058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 22666813 - 22666865
Alignment:
| Q |
542 |
agaagacaaacctgaagagtcaagctttccttctttctttctaacttcatctc |
594 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||| || |||||||||| |
|
|
| T |
22666813 |
agaagtcaaacctgtagagtcaagctttccttctttcttcctcacttcatctc |
22666865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 22723452 - 22723504
Alignment:
| Q |
542 |
agaagacaaacctgaagagtcaagctttccttctttctttctaacttcatctc |
594 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||| || |||||||||| |
|
|
| T |
22723452 |
agaagtcaaacctgtagagtcaagctttccttctttcttcctcacttcatctc |
22723504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University