View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19860_high_40 (Length: 322)
Name: NF19860_high_40
Description: NF19860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19860_high_40 |
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Alignment Details
Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 18 - 308
Target Start/End: Original strand, 98754 - 99044
Alignment:
| Q |
18 |
ttttaatataaacttcacaaatgcatagttaacatgttgttcaatttggtttgaaaaatagtggtcaggttggtcacttcatagaccatgtatagtcaat |
117 |
Q |
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| T |
98754 |
ttttaatataaacttcacaaatgcatagttaacatgttgttcaatttggtttgaaaaatagtggtcaggttggtcacttcatagaccatctatagtcaat |
98853 |
T |
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| Q |
118 |
ttgagcaaacatcaacaaatattttttattttctttgatagatgaatgcgattaacaagtgttgatctcacattactattgacatttgatcatatatgaa |
217 |
Q |
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| T |
98854 |
ttgagcaaacatcaacaaatattttttattttctttgatagatgaatgcgattaacaagtgttgatctcacattactattgacatttgagcatatataaa |
98953 |
T |
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| Q |
218 |
agaaatagctttgattgttagactaataattttggtttgtgaacgtgctattgatttctaaaaattctatttatatttgtaatgttagtac |
308 |
Q |
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| T |
98954 |
agaaatagctttgattgttagactaataattttggtttgtgaacgtgctattgatttctaaaaattctatttatatttgtaacgttagtac |
99044 |
T |
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