View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19860_low_38 (Length: 331)
Name: NF19860_low_38
Description: NF19860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19860_low_38 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 82 - 321
Target Start/End: Original strand, 4488692 - 4488927
Alignment:
| Q |
82 |
ctattaaagcaaagacttgtactaattaactttaacattggataagaaaaatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaac |
181 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4488692 |
ctattaaagcaaagacgtgtactaa----ctttaacattggataagaaaaatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaac |
4488787 |
T |
|
| Q |
182 |
accatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaat |
281 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| |
|
|
| T |
4488788 |
accatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggatttcacataacctttgtcaacactgaatacaat |
4488887 |
T |
|
| Q |
282 |
cacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4488888 |
cacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
4488927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 110 - 321
Target Start/End: Complemental strand, 3173612 - 3173401
Alignment:
| Q |
110 |
actttaacattggataagaaaaatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaat |
209 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||||| | ||||||| ||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
3173612 |
actttaacattgcattagaaaaatatcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaat |
3173513 |
T |
|
| Q |
210 |
gcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtc |
309 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
3173512 |
gcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtc |
3173413 |
T |
|
| Q |
310 |
caaatgcctttg |
321 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3173412 |
caaatgcctttg |
3173401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 123 - 321
Target Start/End: Complemental strand, 4576051 - 4575853
Alignment:
| Q |
123 |
ataagaaaaatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaac |
222 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4576051 |
ataagaaaaatatcaatcatgagtaactttgaagagaaaaagccacatgcagtgttaactccatttccagttcaaggccatatcaatgcattgttgaaaa |
4575952 |
T |
|
| Q |
223 |
taggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
||| |||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
4575951 |
tagcaaaactgcttcaccttagaggctttcacataacctttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttg |
4575853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 110 - 321
Target Start/End: Complemental strand, 4482473 - 4482263
Alignment:
| Q |
110 |
actttaacattggataagaaaaatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaat |
209 |
Q |
| |
|
|||||||||||| |||| || ||||||||||||||||||||||| ||| | ||| |||||||||||||| || |||||||||| |||||||||||||||| |
|
|
| T |
4482473 |
actttaacattgcataa-aagaatatcaaagatgagtaactttgcagaaaaaaaaccacatgcagtgttgactccatttccagctcaaggccatatcaat |
4482375 |
T |
|
| Q |
210 |
gcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtc |
309 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| |
|
|
| T |
4482374 |
gcattgttgaaaataggaaaactacttcaccttagaggctttcacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtc |
4482275 |
T |
|
| Q |
310 |
caaatgcctttg |
321 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
4482274 |
caaaagcctttg |
4482263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 165 - 321
Target Start/End: Original strand, 4612292 - 4612448
Alignment:
| Q |
165 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
264 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||||||| |||| | ||||||| |||||| |||||||||||||||||| ||||||| || | |
|
|
| T |
4612292 |
ccacatgcagtgttaattccatatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataacattcg |
4612391 |
T |
|
| Q |
265 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4612392 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
4612448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 162 - 321
Target Start/End: Complemental strand, 4517897 - 4517738
Alignment:
| Q |
162 |
aagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacct |
261 |
Q |
| |
|
||||||||||||||| |||| |||| |||| ||||||||||||||||| | ||||| ||||||| |||||| ||||| |||||||||||| ||||||||| |
|
|
| T |
4517897 |
aagccacatgcagtgataactccatatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcatcttagaggctttcacataacct |
4517798 |
T |
|
| Q |
262 |
ttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
4517797 |
ttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttg |
4517738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 140 - 321
Target Start/End: Complemental strand, 4627732 - 4627548
Alignment:
| Q |
140 |
gatgagtaactttgaagagagaa---agccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactactt |
236 |
Q |
| |
|
|||||||||||||| | |||||| |||||||||| ||||| | ||||||||| ||||||||||||||||| ||||||||| ||||| |||| ||||| |
|
|
| T |
4627732 |
gatgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaattactt |
4627633 |
T |
|
| Q |
237 |
caccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
4627632 |
caccttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttg |
4627548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 110 - 245
Target Start/End: Original strand, 4497763 - 4497899
Alignment:
| Q |
110 |
actttaacattggataagaaaa-atatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaa |
208 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || ||||||||||||| |
|
|
| T |
4497763 |
actttaacattggataagaaaaaatatcaaagatgagtaactttgaagagaaaaagccacatgcagtgttaactccatttccaatttaaggccatatcaa |
4497862 |
T |
|
| Q |
209 |
tgcattgttgaaactaggaaaactacttcaccttaga |
245 |
Q |
| |
|
| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
4497863 |
tccattgttgaaactaggaaaattacttcaccttaga |
4497899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 123 - 321
Target Start/End: Complemental strand, 4562262 - 4562060
Alignment:
| Q |
123 |
ataagaaaaatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaa----caccatttccagttcaaggccatatcaatgcattgttg |
218 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| || ||||||||||||||||| | ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4562262 |
ataagaaaaatatcaaacatgaccaactttgaagagaaaaggccacatgcagtgttaattaactccatttccagttcaaggtcatatcaatgcattgttg |
4562163 |
T |
|
| Q |
219 |
aaactaggaaaactacttcaccttagaggcttttacat-aacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcc |
317 |
Q |
| |
|
||| ||| |||||| |||||||| ||||||||| |||| ||||||||| ||||| ||||||||||||||||| ||||| |||||||||||| ||||||| |
|
|
| T |
4562162 |
aaaatagcaaaactgcttcacctaagaggctttcacataaacctttgttaacactgaatacaatcacaaacgtttgct-aaatcaagaggtgaaaatgcc |
4562064 |
T |
|
| Q |
318 |
tttg |
321 |
Q |
| |
|
|||| |
|
|
| T |
4562063 |
tttg |
4562060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 161 - 314
Target Start/End: Original strand, 4265627 - 4265780
Alignment:
| Q |
161 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
260 |
Q |
| |
|
|||||||||||| ||||| | ||| |||| ||||||||||||||||||||||||| || |||||||| || |||||||||||||||||| |||||||| |
|
|
| T |
4265627 |
aaagccacatgctgtgttgattccagctccatttcaaggccatatcaatgcattgttcaatctaggaaagcttcttcaccttagaggctttcacataacc |
4265726 |
T |
|
| Q |
261 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaat |
314 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4265727 |
tttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaat |
4265780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 134 - 321
Target Start/End: Complemental strand, 4507496 - 4507309
Alignment:
| Q |
134 |
atcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaacta |
233 |
Q |
| |
|
||||||||||||||| |||| | ||||||| |||||||| ||||| | |||| |||| |||||||||||||||| ||||||| ||||||| || || |
|
|
| T |
4507496 |
atcaaagatgagtaattttgcaaagagaaaaccacatgctgtgttgattccatatccaactcaaggccatatcaatccattgttcaaactagctaagctt |
4507397 |
T |
|
| Q |
234 |
cttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4507396 |
cttcaccttcgaggctttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttg |
4507309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 4618837 - 4618707
Alignment:
| Q |
183 |
ccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatc |
282 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| ||||||| ||| || |||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
4618837 |
ccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttgttaacaccgaatacaatc |
4618738 |
T |
|
| Q |
283 |
acaaacgcttgctcaaatcaagaggtccaaa |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
4618737 |
acaaacgcttgctcaaatcaagaggtccaaa |
4618707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 141 - 310
Target Start/End: Complemental strand, 4462785 - 4462616
Alignment:
| Q |
141 |
atgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcacc |
240 |
Q |
| |
|
|||||||| |||| | ||| |||||||||||| ||||| | |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4462785 |
atgagtaattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcacc |
4462686 |
T |
|
| Q |
241 |
ttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtcc |
310 |
Q |
| |
|
||||||| ||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
4462685 |
ttagaggttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcc |
4462616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 165 - 321
Target Start/End: Complemental strand, 4558679 - 4558523
Alignment:
| Q |
165 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
264 |
Q |
| |
|
|||||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||| ||||||||| || |
|
|
| T |
4558679 |
ccacatgctgtgttaattccatatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcacataacctatg |
4558580 |
T |
|
| Q |
265 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
| ||||| |||||||| |||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
4558579 |
taaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttg |
4558523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 319
Target Start/End: Complemental strand, 4603646 - 4603510
Alignment:
| Q |
183 |
ccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatc |
282 |
Q |
| |
|
|||| |||| ||||||||||||||||| || |||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
4603646 |
ccatatccacttcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagaggatttcacataacctttgtcaacaccgaatacaatc |
4603547 |
T |
|
| Q |
283 |
acaaacgcttgctcaaatcaagaggtccaaatgcctt |
319 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
4603546 |
acaaacgtttgctcaaatcaagaggtcctaatgcctt |
4603510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 110 - 321
Target Start/End: Original strand, 4513498 - 4513709
Alignment:
| Q |
110 |
actttaacattggataagaaaaatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaat |
209 |
Q |
| |
|
|||||||||||| | ||||||| ||||| | |||||||| | || | ||||| |||||||| ||||| | |||| |||| ||||||||||||||||| |
|
|
| T |
4513498 |
actttaacattgcacaagaaaattatcagaaatgagtaattctgcaagcagaaaaccacatgctgtgttgattccatatccacttcaaggccatatcaat |
4513597 |
T |
|
| Q |
210 |
gcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtc |
309 |
Q |
| |
|
|| |||| | | ||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4513598 |
ccaatgttcagattagcaaaactacttcaccttagaggctttcacataacctttgttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtc |
4513697 |
T |
|
| Q |
310 |
caaatgcctttg |
321 |
Q |
| |
|
| ||||| |||| |
|
|
| T |
4513698 |
ctaatgcttttg |
4513709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 110 - 310
Target Start/End: Complemental strand, 4471520 - 4471323
Alignment:
| Q |
110 |
actttaacattggataagaaaaatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaat |
209 |
Q |
| |
|
|||||||||||| || |||||||| |||| |||||||| |||| | ||| |||||||||||| || || | |||| ||||| |||||||||||||||| |
|
|
| T |
4471520 |
actttaacattg-attagaaaaat--caaatatgagtaattttgcaaagacaaagccacatgctgtattgattccatgtccagctcaaggccatatcaat |
4471424 |
T |
|
| Q |
210 |
gcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtc |
309 |
Q |
| |
|
|||||||||||||||| ||| || |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
4471423 |
gcattgttgaaactagcaaagcttcttcaccttagaggctttcacataacgtttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtc |
4471324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 165 - 321
Target Start/End: Complemental strand, 4572520 - 4572364
Alignment:
| Q |
165 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
264 |
Q |
| |
|
|||||||| ||||||| |||| |||||||||||||||||||||| |||||||| |||||| |||| | |||||||||||||| ||| ||||||||| || |
|
|
| T |
4572520 |
ccacatgctgtgttaatcccatatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcacataacctatg |
4572421 |
T |
|
| Q |
265 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
| ||||| ||||||||||||||||| |||||||| |||||||||| ||||||||||| |
|
|
| T |
4572420 |
taaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttg |
4572364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 161 - 313
Target Start/End: Complemental strand, 4581572 - 4581420
Alignment:
| Q |
161 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
260 |
Q |
| |
|
|||||||||||||||||| | |||| |||| ||||||| ||||||| | |||| | | ||||| ||| || |||||||||||||||||| |||||||| |
|
|
| T |
4581572 |
aaagccacatgcagtgttgattccatatccacttcaaggacatatcactccattaataacactagcaaagcttcttcaccttagaggctttcacataacc |
4581473 |
T |
|
| Q |
261 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaa |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4581472 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaa |
4581420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 133 - 319
Target Start/End: Complemental strand, 4594596 - 4594410
Alignment:
| Q |
133 |
tatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaact |
232 |
Q |
| |
|
||||||||||| | ||||||| | | ||||| |||||||| ||||| | ||| |||| ||||||| ||||| ||| ||||||| ||||| | |||||| |
|
|
| T |
4594596 |
tatcaaagatgggaaactttgcaaacagaaaaccacatgctgtgttgattccagctccacttcaaggacatataaatccattgttcaaacttgcaaaact |
4594497 |
T |
|
| Q |
233 |
acttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctt |
319 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4594496 |
tcttcaccttagaggatttcacataacctttgtcaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgcctt |
4594410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 168 - 321
Target Start/End: Complemental strand, 4587183 - 4587030
Alignment:
| Q |
168 |
catgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtca |
267 |
Q |
| |
|
||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| |||| ||| ||||||||||||| | |
|
|
| T |
4587183 |
catgctgtgttaatcccatctccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacctttgtaa |
4587084 |
T |
|
| Q |
268 |
acaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
|||| ||||||||||||||||| ||||| || ||||||| |||||||||||||| |
|
|
| T |
4587083 |
acactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttg |
4587030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 161 - 321
Target Start/End: Complemental strand, 4623865 - 4623705
Alignment:
| Q |
161 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
260 |
Q |
| |
|
|||||||||||| ||||| | ||| |||||||||||| ||||||||| ||||||| ||||||| ||| || ||| |||||| ||||||| |||||||| |
|
|
| T |
4623865 |
aaagccacatgctgtgttgattgcatatccagttcaaggtcatatcaatccattgttcaaactagcaaagcttctttaccttaaaggctttcacataacc |
4623766 |
T |
|
| Q |
261 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4623765 |
tttggtcacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcctttg |
4623705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 178 - 321
Target Start/End: Complemental strand, 4569611 - 4569472
Alignment:
| Q |
178 |
taacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaata |
277 |
Q |
| |
|
|||| |||| |||| ||||||||||||||||| |||| |||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4569611 |
taactccatatccacttcaaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccga--- |
4569515 |
T |
|
| Q |
278 |
caatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
4569514 |
-aatcacaaacatttgctcaaatcaagaggtccaaaagcctttg |
4569472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 126 - 319
Target Start/End: Complemental strand, 4565622 - 4565429
Alignment:
| Q |
126 |
agaaaaatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactag |
225 |
Q |
| |
|
|||||||| ||||||||| | | |||| | | ||||| |||||||| ||||| | ||| |||| ||||||| ||||| ||| ||||||| ||||| | |
|
|
| T |
4565622 |
agaaaaatttcaaagatgggaagttttgcaaacagaaaaccacatgctgtgttgattccagctccatttcaaggacatataaatccattgttcaaacttg |
4565523 |
T |
|
| Q |
226 |
gaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctt |
319 |
Q |
| |
|
|||||| |||||||||||||| ||| | ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
4565522 |
caaaacttcttcaccttagaggatttcatataacctttgtcaacactgaatacaatcataaacgattgctaaaatcaagaggtccaaatgcctt |
4565429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 4258746 - 4258902
Alignment:
| Q |
161 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
260 |
Q |
| |
|
|||||||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| || || |||||| ||| ||| ||| |||||||| |
|
|
| T |
4258746 |
aaagccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagctaagcttcttcactttaaaggttttcacataacc |
4258845 |
T |
|
| Q |
261 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcc |
317 |
Q |
| |
|
||||||||||| ||||| ||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
4258846 |
tttgtcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgcc |
4258902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 4502943 - 4503023
Alignment:
| Q |
241 |
ttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4502943 |
ttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
4503023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 4599648 - 4599572
Alignment:
| Q |
234 |
cttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtcc |
310 |
Q |
| |
|
|||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4599648 |
cttcaccttagaggattttacataaccttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcc |
4599572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 4255394 - 4255539
Alignment:
| Q |
164 |
gccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataaccttt |
263 |
Q |
| |
|
||||||||| ||||| | |||| |||||||||||||||||||||| ||| || ||||||| |||| ||||||| |||| ||||||| |
|
|
| T |
4255394 |
gccacatgctgtgttgattccatatccagttcaaggccatatcaatctattattcaaactagcaaaattacttcatcttaaaggcttt------------ |
4255481 |
T |
|
| Q |
264 |
gtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttg |
321 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
4255482 |
gtcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttg |
4255539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 4298172 - 4298220
Alignment:
| Q |
265 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaa |
313 |
Q |
| |
|
|||||||||||||||||||||||| | ||||| ||||||| |||||||| |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaa |
4298220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 4493505 - 4493401
Alignment:
| Q |
114 |
taacattggataagaaaaatatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcat |
213 |
Q |
| |
|
|||||||| |||||||||||| ||| || |||||||||| ||||| |||||||||||||| | |||||||||| |||||| |||||||||||| |
|
|
| T |
4493505 |
taacattgcataagaaaaata-gaaacattagtaactttg----cagaaaaccacatgcagtgttgattccatttccagctcaaggtcatatcaatgcaa |
4493411 |
T |
|
| Q |
214 |
tgttgaaact |
223 |
Q |
| |
|
|| ||||||| |
|
|
| T |
4493410 |
tgctgaaact |
4493401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 309
Target Start/End: Original strand, 4483534 - 4483569
Alignment:
| Q |
274 |
aatacaatcacaaacgcttgctcaaatcaagaggtc |
309 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4483534 |
aatacaatcacaaacgtttgctcaaatcaagaggtc |
4483569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 4485892 - 4485846
Alignment:
| Q |
124 |
taagaaaaatatcaaagatgagtaactttgaagagagaaagccacatg |
171 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
4485892 |
taagaaaaat-tcaaagatgagtaattttgaagagagaaaaccacatg |
4485846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 165 - 317
Target Start/End: Complemental strand, 1282987 - 1282835
Alignment:
| Q |
165 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
264 |
Q |
| |
|
|||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1282987 |
ccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagaggcttttacataacctttg |
1282888 |
T |
|
| Q |
265 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcc |
317 |
Q |
| |
|
| || || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1282887 |
ttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcc |
1282835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 110 - 312
Target Start/End: Original strand, 20862328 - 20862531
Alignment:
| Q |
110 |
actttaacattggataagaaaaatatcaa-agatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaa |
208 |
Q |
| |
|
||||||||||| |||||||||| | | | |||||||||| |||| |||| ||| ||||||||||||||||| |||| |||| ||||||| |||||||| |
|
|
| T |
20862328 |
actttaacatttcataagaaaaaaaaccagagatgagtaattttgctgagaaaaaaccacatgcagtgttaactccatatccacttcaaggtcatatcaa |
20862427 |
T |
|
| Q |
209 |
tgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggt |
308 |
Q |
| |
|
| || |||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| || |||| ||| |
|
|
| T |
20862428 |
tccaatgttaaaactagcaaaactacttcaccttagaggcttttacataacatttgtcaatactgaatacaatcacaaacgcttgcttaagtcaatgggt |
20862527 |
T |
|
| Q |
309 |
ccaa |
312 |
Q |
| |
|
|||| |
|
|
| T |
20862528 |
ccaa |
20862531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 319
Target Start/End: Complemental strand, 1676107 - 1675921
Alignment:
| Q |
133 |
tatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaact |
232 |
Q |
| |
|
||||||| ||| | ||||||| | | ||||| ||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| |||||| |
|
|
| T |
1676107 |
tatcaaaaatgggaaactttgcaaacagaaaatcacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaact |
1676008 |
T |
|
| Q |
233 |
acttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctt |
319 |
Q |
| |
|
||||||||||||||| | | |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
1676007 |
tattcaccttagaggctctcatgtaacctatgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgcctt |
1675921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 316
Target Start/End: Original strand, 2043 - 2176
Alignment:
| Q |
183 |
ccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatc |
282 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| ||||||| ||| || |||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
2043 |
ccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatc |
2142 |
T |
|
| Q |
283 |
acaaacgcttgctcaaatcaagaggtccaaatgc |
316 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||| |
|
|
| T |
2143 |
ataaacgcttgctcaaatcaagaggtcctaatgc |
2176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 165 - 316
Target Start/End: Complemental strand, 2378 - 2227
Alignment:
| Q |
165 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
264 |
Q |
| |
|
|||||||| ||||| | |||| |||||||||||||||||||||| |||| || ||||||| ||| || |||||||||||||||||| |||||||||||| |
|
|
| T |
2378 |
ccacatgctgtgttgattccatatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttcaccttagaggctttcacataacctttg |
2279 |
T |
|
| Q |
265 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgc |
316 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
2278 |
tcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgc |
2227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 134 - 308
Target Start/End: Complemental strand, 3088330 - 3088156
Alignment:
| Q |
134 |
atcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaacta |
233 |
Q |
| |
|
||||||||||||| |||||| || | |||||||||||| ||||| | |||| |||| ||||||| ||||| ||| ||||||| ||||||| |||||| |
|
|
| T |
3088330 |
atcaaagatgagttactttgttgataaaaagccacatgctgtgttgattccatatccacttcaaggtcatataaatccattgttaaaactagcaaaactt |
3088231 |
T |
|
| Q |
234 |
cttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggt |
308 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||| ||||||||||||||||| || ||||| |||||||||||| |
|
|
| T |
3088230 |
cttcaccttaaaggctttcacataacctttgtcaataccgaatacaatcacaaccgtttgcttaaatcaagaggt |
3088156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 188 - 306
Target Start/End: Complemental strand, 24104626 - 24104508
Alignment:
| Q |
188 |
tccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaa |
287 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
24104626 |
tccatttcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcaccttagaggctttcacataaccttcgtgaacaccgaatacaatcacaaa |
24104527 |
T |
|
| Q |
288 |
cgcttgctcaaatcaagag |
306 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
24104526 |
cgcttgctcgaatcaagag |
24104508 |
T |
|
Back To:
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Target: scaffold0199 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 319
Target Start/End: Complemental strand, 1344 - 1158
Alignment:
| Q |
133 |
tatcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaact |
232 |
Q |
| |
|
||||||| ||| | ||||||| | | ||||| ||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| |||||| |
|
|
| T |
1344 |
tatcaaaaatgggaaactttgcaaacagaaaatcacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaact |
1245 |
T |
|
| Q |
233 |
acttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctt |
319 |
Q |
| |
|
||||||||||||||| | | |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
1244 |
tattcaccttagaggctctcatgtaacctatgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgcctt |
1158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 1349571 - 1349641
Alignment:
| Q |
245 |
aggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatg |
315 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||| ||| ||||||||||| |||||||| | |||||| |||| |
|
|
| T |
1349571 |
aggcttctacataacatttgtcaacactgaattcaaccacaaacgcttactcaaatccataggtcctaatg |
1349641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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