View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19860_low_52 (Length: 270)
Name: NF19860_low_52
Description: NF19860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19860_low_52 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 19 - 257
Target Start/End: Original strand, 43602490 - 43602728
Alignment:
| Q |
19 |
acttactacacatcaaaccattgatcatgaaatgatctttcttttgaagagaaataaaacttactaagaaatatcaatggactctcccaactcacctgat |
118 |
Q |
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| T |
43602490 |
acttactacacatcaaaccattgatcatgaaatgatctttcttttgaagagaaatacaacttactaagaaatatcaatggactctcccaactcacctgat |
43602589 |
T |
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| Q |
119 |
tttgcttttacatcatcaaccacagttcacaacaacaacagtaacatctttagaagccgttctacaaaagaaacacctttctcaaaactctcatgtccaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43602590 |
tttgcttttacatcatcaaccacagttcacaacaacaacagtaacatctttagaagccgttctacaaaagaaacacctttctcaaaactctcatgtccaa |
43602689 |
T |
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| Q |
219 |
ctttctcacgcagtcttcaaaactctccagtttcatctc |
257 |
Q |
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| T |
43602690 |
ctttctcacgcagtcttcaaaactctccagtttcatctc |
43602728 |
T |
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