View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19860_low_65 (Length: 237)
Name: NF19860_low_65
Description: NF19860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19860_low_65 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 33462517 - 33462297
Alignment:
| Q |
1 |
tggaatacagtatttgtatgtatatcgataacacaaattaaatgagtaaattaatcttcttctttgagatatatatacattgtttctattgcttcaaagt |
100 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33462517 |
tggaatacagtatttgtatgtatatagataacacaaattaaatgagtaaattaatcttcttctttgagatatatatacattgtttctattgcttcaaagt |
33462418 |
T |
|
| Q |
101 |
gaagttttctgctaacaactaaataagtagttataacatgaacatctttggtcgttcttccccacctaaatggtcagctaaattatgtggatgtggagaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
33462417 |
gaagttttctgctaacaactaaataagtagttataacatgaacatctttggtcgttcttccccacctaaatggtcagctaaattatgtggctgtggagaa |
33462318 |
T |
|
| Q |
201 |
aacccaggaacatgtaagatc |
221 |
Q |
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||||||||||||||||||||| |
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| T |
33462317 |
aacccaggaacatgtaagatc |
33462297 |
T |
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