View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19861_high_3 (Length: 273)
Name: NF19861_high_3
Description: NF19861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19861_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 43666542 - 43666788
Alignment:
| Q |
17 |
caaaggaagcagtagcatacatgtttttgtttaaggtgttaatgtgtttgagcttaattttgatttttgaggttggttgcactaaggggatttgtatatt |
116 |
Q |
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| T |
43666542 |
caaaggaagtagtagcatacatgtttttgtttaaggtgttaatgtttttgagcttaattttgatttttgaggttggttgcactaaggggatttgtatatt |
43666641 |
T |
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| Q |
117 |
tataaggtggttggatttgttgtctttctctgattgtggcatgaaattacaattatcaattattat------ataataatgtgttaaatagtgtagctat |
210 |
Q |
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| T |
43666642 |
tataaggtggttggatttgttgtctttctcttattgtggcatgaaattacaattatcaattattatataataataataatgtgctaaatagtgtagctat |
43666741 |
T |
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| Q |
211 |
aggtagctttgtaatcagaatattcctagaaggttatggttagatat |
257 |
Q |
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| T |
43666742 |
aggtagctttgtaatcagaatattcctagaaggttatggttagatat |
43666788 |
T |
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