View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19861_low_4 (Length: 249)

Name: NF19861_low_4
Description: NF19861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19861_low_4
NF19861_low_4
[»] chr3 (54 HSPs)
chr3 (2-98)||(20201137-20201233)
chr3 (2-98)||(20203319-20203415)
chr3 (12-98)||(1165475-1165561)
chr3 (12-98)||(42106060-42106146)
chr3 (8-98)||(43029628-43029718)
chr3 (2-98)||(21803469-21803565)
chr3 (2-98)||(50519729-50519825)
chr3 (12-98)||(913397-913483)
chr3 (12-98)||(40462074-40462160)
chr3 (2-98)||(35501838-35501933)
chr3 (23-98)||(22286828-22286903)
chr3 (12-98)||(22844000-22844086)
chr3 (23-98)||(41882487-41882562)
chr3 (2-98)||(20251590-20251687)
chr3 (18-98)||(40796988-40797067)
chr3 (9-80)||(43839613-43839684)
chr3 (20-97)||(1806540-1806617)
chr3 (20-97)||(37051581-37051658)
chr3 (12-98)||(11846564-11846650)
chr3 (12-98)||(25374149-25374234)
chr3 (2-98)||(27831054-27831146)
chr3 (25-98)||(2598045-2598118)
chr3 (18-98)||(1220294-1220374)
chr3 (12-71)||(29776782-29776841)
chr3 (51-98)||(45664217-45664264)
chr3 (19-98)||(53426760-53426839)
chr3 (172-222)||(2598215-2598265)
chr3 (168-222)||(22844184-22844238)
chr3 (169-222)||(39340332-39340385)
chr3 (168-220)||(29182538-29182590)
chr3 (161-193)||(37051721-37051753)
chr3 (168-220)||(41882340-41882392)
chr3 (168-220)||(43029815-43029867)
chr3 (24-72)||(47914688-47914736)
chr3 (168-220)||(50519915-50519967)
chr3 (168-207)||(3088607-3088646)
chr3 (168-207)||(22286694-22286733)
chr3 (168-207)||(28995252-28995291)
chr3 (48-98)||(4019587-4019636)
chr3 (168-206)||(14741270-14741308)
chr3 (161-191)||(21289921-21289951)
chr3 (55-89)||(25939564-25939598)
chr3 (168-222)||(29776618-29776672)
chr3 (168-222)||(32237924-32237978)
chr3 (1-87)||(33978010-33978096)
chr3 (163-193)||(36540658-36540688)
chr3 (168-222)||(40797165-40797219)
chr3 (12-65)||(27056003-27056056)
chr3 (170-223)||(32089857-32089910)
chr3 (168-220)||(1165326-1165378)
chr3 (163-191)||(4019694-4019722)
chr3 (163-191)||(7546567-7546595)
chr3 (168-220)||(33977855-33977907)
chr3 (161-189)||(53426895-53426923)
[»] chr6 (32 HSPs)
chr6 (12-98)||(16913277-16913363)
chr6 (15-98)||(32457598-32457681)
chr6 (20-98)||(4663899-4663977)
chr6 (25-98)||(10744541-10744614)
chr6 (13-98)||(12576557-12576642)
chr6 (2-94)||(7049186-7049278)
chr6 (2-98)||(32574392-32574488)
chr6 (2-98)||(20844946-20845043)
chr6 (13-98)||(32804245-32804329)
chr6 (12-90)||(8644194-8644272)
chr6 (52-98)||(19759777-19759823)
chr6 (9-98)||(15128228-15128316)
chr6 (163-220)||(31804347-31804404)
chr6 (2-89)||(32257923-32258009)
chr6 (1-98)||(548944-549039)
chr6 (171-220)||(31748092-31748141)
chr6 (27-88)||(34020582-34020643)
chr6 (26-98)||(891551-891623)
chr6 (168-220)||(11426073-11426125)
chr6 (168-220)||(13234038-13234090)
chr6 (168-223)||(4663747-4663802)
chr6 (51-90)||(13234194-13234233)
chr6 (168-222)||(12652125-12652179)
chr6 (161-190)||(15128141-15128170)
chr6 (186-223)||(32804445-32804482)
chr6 (163-191)||(1523363-1523391)
chr6 (161-189)||(4663809-4663837)
chr6 (168-232)||(5544839-5544902)
chr6 (161-193)||(10744680-10744712)
chr6 (168-220)||(12576411-12576463)
chr6 (172-220)||(19759924-19759972)
chr6 (163-191)||(30776627-30776655)
[»] chr4 (62 HSPs)
chr4 (12-98)||(9661802-9661888)
chr4 (7-98)||(4634227-4634318)
chr4 (2-97)||(1657650-1657745)
chr4 (16-98)||(16991825-16991907)
chr4 (12-98)||(28588510-28588596)
chr4 (21-98)||(54420791-54420868)
chr4 (12-91)||(46729005-46729084)
chr4 (29-98)||(43156742-43156812)
chr4 (20-97)||(3673580-3673657)
chr4 (12-98)||(1646020-1646106)
chr4 (2-90)||(6408378-6408467)
chr4 (13-97)||(51646043-51646127)
chr4 (19-98)||(3168996-3169075)
chr4 (31-98)||(14542591-14542658)
chr4 (12-71)||(40859610-40859669)
chr4 (14-90)||(7242856-7242929)
chr4 (16-98)||(30416701-30416783)
chr4 (2-98)||(37869496-37869591)
chr4 (43-98)||(41486555-41486610)
chr4 (52-98)||(23067927-23067973)
chr4 (168-222)||(29474256-29474310)
chr4 (161-207)||(54420684-54420730)
chr4 (2-63)||(9474623-9474684)
chr4 (18-63)||(15730084-15730129)
chr4 (2-98)||(38546191-38546285)
chr4 (10-90)||(4622798-4622877)
chr4 (29-96)||(11817038-11817105)
chr4 (29-96)||(34115733-34115800)
chr4 (168-222)||(15729909-15729963)
chr4 (168-222)||(38434731-38434785)
chr4 (52-98)||(52555800-52555846)
chr4 (168-220)||(4634415-4634467)
chr4 (49-97)||(5388501-5388549)
chr4 (168-220)||(9661985-9662037)
chr4 (168-220)||(14346563-14346615)
chr4 (168-220)||(14542442-14542494)
chr4 (20-92)||(33021011-33021083)
chr4 (161-193)||(38434696-38434728)
chr4 (168-207)||(9474482-9474521)
chr4 (168-207)||(32189112-32189151)
chr4 (55-98)||(42972030-42972073)
chr4 (161-220)||(53903706-53903765)
chr4 (180-222)||(4959501-4959543)
chr4 (168-222)||(7242697-7242751)
chr4 (2-96)||(29577166-29577260)
chr4 (168-222)||(40859806-40859860)
chr4 (168-222)||(43156908-43156962)
chr4 (168-222)||(46728848-46728902)
chr4 (168-222)||(51646226-51646280)
chr4 (161-190)||(12519753-12519782)
chr4 (161-194)||(46775840-46775873)
chr4 (171-223)||(1125076-1125128)
chr4 (161-193)||(1657551-1657583)
chr4 (12-64)||(9549426-9549478)
chr4 (161-193)||(15729966-15729998)
chr4 (168-220)||(23067778-23067830)
chr4 (161-193)||(29589346-29589378)
chr4 (171-207)||(30470066-30470102)
chr4 (163-191)||(31891394-31891422)
chr4 (161-193)||(43156873-43156905)
chr4 (168-220)||(46716824-46716876)
chr4 (161-193)||(46728905-46728937)
[»] chr2 (71 HSPs)
chr2 (12-98)||(3390381-3390467)
chr2 (12-98)||(25771394-25771480)
chr2 (13-98)||(10588988-10589073)
chr2 (2-98)||(40125328-40125424)
chr2 (20-98)||(25516451-25516529)
chr2 (8-98)||(27024218-27024308)
chr2 (20-98)||(27191414-27191492)
chr2 (20-98)||(27841228-27841306)
chr2 (20-98)||(41176819-41176897)
chr2 (2-98)||(44167788-44167884)
chr2 (14-97)||(6089844-6089927)
chr2 (12-98)||(19581082-19581168)
chr2 (9-98)||(5930369-5930458)
chr2 (2-98)||(3602924-3603020)
chr2 (2-97)||(37883592-37883687)
chr2 (12-98)||(42105831-42105917)
chr2 (20-91)||(43566834-43566904)
chr2 (20-90)||(3464916-3464986)
chr2 (26-98)||(29812694-29812766)
chr2 (23-95)||(36507891-36507963)
chr2 (52-98)||(7640435-7640481)
chr2 (12-77)||(4878795-4878860)
chr2 (49-98)||(15674053-15674102)
chr2 (21-98)||(26491261-26491338)
chr2 (15-91)||(25623131-25623207)
chr2 (161-220)||(3465054-3465113)
chr2 (18-73)||(44951457-44951512)
chr2 (168-222)||(24500619-24500673)
chr2 (2-71)||(24500461-24500530)
chr2 (14-91)||(34479907-34479984)
chr2 (14-98)||(41841900-41841985)
chr2 (49-95)||(16880041-16880087)
chr2 (168-222)||(19580930-19580984)
chr2 (169-222)||(15673896-15673949)
chr2 (12-89)||(44441335-44441412)
chr2 (168-220)||(5930555-5930607)
chr2 (16-88)||(9715634-9715706)
chr2 (168-220)||(16879895-16879947)
chr2 (168-220)||(16992028-16992080)
chr2 (168-220)||(25771577-25771629)
chr2 (168-220)||(27024069-27024121)
chr2 (168-220)||(27191267-27191319)
chr2 (168-220)||(27841081-27841133)
chr2 (168-220)||(38822204-38822256)
chr2 (168-220)||(41176990-41177042)
chr2 (168-208)||(44167653-44167693)
chr2 (1-96)||(3398060-3398158)
chr2 (168-239)||(4878648-4878718)
chr2 (19-90)||(25237413-25237484)
chr2 (48-91)||(35353637-35353680)
chr2 (168-207)||(43567005-43567044)
chr2 (168-222)||(7443494-7443548)
chr2 (168-222)||(10589227-10589281)
chr2 (168-222)||(16720776-16720830)
chr2 (163-193)||(26491401-26491431)
chr2 (163-193)||(35353742-35353772)
chr2 (168-222)||(37883785-37883839)
chr2 (43-84)||(19953364-19953405)
chr2 (164-193)||(25237311-25237340)
chr2 (2-51)||(32909015-32909064)
chr2 (161-190)||(41842045-41842074)
chr2 (161-193)||(2251330-2251362)
chr2 (163-191)||(3308909-3308937)
chr2 (168-220)||(7640286-7640338)
chr2 (163-191)||(10237324-10237352)
chr2 (2-78)||(16720916-16720992)
chr2 (49-89)||(17037737-17037777)
chr2 (168-220)||(25516624-25516676)
chr2 (168-220)||(36508061-36508113)
chr2 (168-220)||(43929230-43929282)
chr2 (168-220)||(44951551-44951603)
[»] chr8 (52 HSPs)
chr8 (12-98)||(16937418-16937504)
chr8 (2-98)||(9269960-9270056)
chr8 (14-97)||(37658917-37659000)
chr8 (20-98)||(31874041-31874119)
chr8 (19-98)||(10042717-10042796)
chr8 (12-98)||(15665488-15665574)
chr8 (12-98)||(32256800-32256887)
chr8 (2-91)||(23766681-23766770)
chr8 (24-98)||(36545860-36545934)
chr8 (2-95)||(14115875-14115967)
chr8 (20-97)||(32061751-32061828)
chr8 (2-98)||(9992604-9992700)
chr8 (2-89)||(37719790-37719877)
chr8 (31-98)||(44295284-44295351)
chr8 (20-94)||(14327436-14327510)
chr8 (12-77)||(31713135-31713200)
chr8 (14-98)||(3680872-3680958)
chr8 (11-90)||(13864307-13864386)
chr8 (24-98)||(26937486-26937560)
chr8 (52-98)||(8054887-8054933)
chr8 (168-222)||(10042904-10042958)
chr8 (168-222)||(12248642-12248696)
chr8 (168-220)||(9270153-9270205)
chr8 (12-86)||(31147891-31147962)
chr8 (168-220)||(44295448-44295500)
chr8 (168-239)||(31712988-31713058)
chr8 (56-98)||(7269543-7269585)
chr8 (163-193)||(15827109-15827139)
chr8 (161-222)||(31147759-31147818)
chr8 (172-234)||(32412926-32412987)
chr8 (43-97)||(32920632-32920686)
chr8 (168-222)||(37659098-37659152)
chr8 (163-193)||(37719950-37719980)
chr8 (12-96)||(5917821-5917903)
chr8 (29-98)||(5989596-5989665)
chr8 (1-98)||(7281206-7281303)
chr8 (48-97)||(14530988-14531037)
chr8 (161-193)||(1215324-1215356)
chr8 (168-220)||(5457203-5457255)
chr8 (163-191)||(5917729-5917757)
chr8 (168-220)||(8054737-8054789)
chr8 (161-193)||(12248699-12248731)
chr8 (161-193)||(14327576-14327608)
chr8 (161-193)||(16937324-16937356)
chr8 (168-220)||(16996819-16996871)
chr8 (163-191)||(18890804-18890832)
chr8 (44-96)||(27534480-27534532)
chr8 (168-220)||(31874216-31874268)
chr8 (161-193)||(32061891-32061923)
chr8 (168-220)||(37129605-37129657)
chr8 (18-74)||(37129761-37129817)
chr8 (163-191)||(39657410-39657438)
[»] chr1 (52 HSPs)
chr1 (12-98)||(22344991-22345077)
chr1 (12-90)||(44514077-44514155)
chr1 (21-98)||(6212965-6213042)
chr1 (14-92)||(30853868-30853946)
chr1 (2-79)||(14717340-14717417)
chr1 (4-98)||(52839364-52839458)
chr1 (168-234)||(32539106-32539172)
chr1 (168-222)||(26199712-26199766)
chr1 (50-98)||(5832220-5832268)
chr1 (38-97)||(22032169-22032229)
chr1 (55-98)||(44562828-44562871)
chr1 (20-97)||(13691838-13691916)
chr1 (161-207)||(14717213-14717259)
chr1 (2-93)||(26199536-26199630)
chr1 (14-92)||(33703594-33703671)
chr1 (44-89)||(48655154-48655199)
chr1 (171-223)||(33703437-33703489)
chr1 (2-98)||(37685175-37685270)
chr1 (2-98)||(37700248-37700343)
chr1 (1-88)||(27469821-27469908)
chr1 (168-219)||(38646716-38646767)
chr1 (43-98)||(52839501-52839556)
chr1 (168-222)||(10264841-10264895)
chr1 (21-98)||(10877303-10877381)
chr1 (44-98)||(12148127-12148181)
chr1 (48-98)||(17579753-17579803)
chr1 (17-91)||(38646538-38646612)
chr1 (161-207)||(45659139-45659185)
chr1 (53-98)||(630864-630909)
chr1 (2-91)||(46589112-46589204)
chr1 (168-220)||(22344842-22344894)
chr1 (13-61)||(23257056-23257104)
chr1 (168-220)||(23257220-23257272)
chr1 (161-193)||(27469693-27469725)
chr1 (161-193)||(40488382-40488414)
chr1 (165-220)||(6212844-6212899)
chr1 (161-220)||(40992433-40992492)
chr1 (163-222)||(46589274-46589333)
chr1 (168-223)||(48654968-48655023)
chr1 (168-222)||(11121108-11121162)
chr1 (29-95)||(18889032-18889097)
chr1 (52-98)||(21326462-21326508)
chr1 (172-222)||(27469636-27469686)
chr1 (168-222)||(28213180-28213234)
chr1 (180-222)||(44513930-44513972)
chr1 (19-65)||(45658671-45658717)
chr1 (168-222)||(52839662-52839716)
chr1 (161-193)||(2350719-2350751)
chr1 (37-97)||(9189215-9189275)
chr1 (163-191)||(16161795-16161823)
chr1 (168-220)||(23320572-23320624)
chr1 (168-220)||(38644727-38644779)
[»] chr7 (58 HSPs)
chr7 (2-98)||(40775206-40775302)
chr7 (20-98)||(24470352-24470430)
chr7 (20-98)||(24475300-24475378)
chr7 (2-98)||(28015295-28015391)
chr7 (12-96)||(47749683-47749767)
chr7 (12-98)||(5025135-5025222)
chr7 (11-97)||(38649438-38649524)
chr7 (20-98)||(49166884-49166962)
chr7 (8-98)||(8611701-8611791)
chr7 (2-98)||(35141832-35141928)
chr7 (2-98)||(23732472-23732568)
chr7 (43-97)||(29804756-29804810)
chr7 (161-239)||(39090213-39090290)
chr7 (13-98)||(25855299-25855388)
chr7 (18-91)||(8319268-8319342)
chr7 (43-97)||(21329376-21329429)
chr7 (13-87)||(35135273-35135347)
chr7 (14-98)||(33530547-33530629)
chr7 (38-97)||(14734130-14734189)
chr7 (43-98)||(24045311-24045366)
chr7 (165-220)||(37399727-37399782)
chr7 (48-98)||(16263372-16263422)
chr7 (168-222)||(28015489-28015543)
chr7 (52-98)||(30992902-30992948)
chr7 (44-89)||(29804976-29805021)
chr7 (12-97)||(41748581-41748666)
chr7 (161-193)||(14734034-14734066)
chr7 (168-220)||(24470525-24470577)
chr7 (168-220)||(24475473-24475525)
chr7 (2-62)||(35661472-35661532)
chr7 (168-220)||(40476839-40476891)
chr7 (168-220)||(40775399-40775451)
chr7 (168-220)||(47749866-47749918)
chr7 (168-239)||(13008585-13008655)
chr7 (12-98)||(23177660-23177747)
chr7 (163-222)||(36350295-36350354)
chr7 (163-206)||(41748471-41748514)
chr7 (168-207)||(49167057-49167096)
chr7 (163-193)||(772542-772572)
chr7 (43-97)||(5237924-5237977)
chr7 (163-193)||(21552440-21552470)
chr7 (2-76)||(37399555-37399629)
chr7 (56-98)||(43807229-43807271)
chr7 (19-96)||(34595731-34595808)
chr7 (25-98)||(43483557-43483629)
chr7 (163-191)||(1749254-1749282)
chr7 (161-193)||(5025041-5025073)
chr7 (168-220)||(7986024-7986076)
chr7 (171-207)||(8611567-8611603)
chr7 (161-193)||(9933944-9933976)
chr7 (168-220)||(11001975-11002027)
chr7 (167-223)||(23177510-23177566)
chr7 (163-191)||(24350944-24350972)
chr7 (168-220)||(26017588-26017640)
chr7 (163-191)||(28476183-28476211)
chr7 (163-191)||(35132903-35132931)
chr7 (186-222)||(37890417-37890453)
chr7 (161-193)||(43483697-43483729)
[»] chr5 (44 HSPs)
chr5 (2-98)||(33486649-33486745)
chr5 (12-98)||(6887257-6887343)
chr5 (2-98)||(18472804-18472897)
chr5 (12-98)||(31645778-31645864)
chr5 (18-98)||(34893995-34894075)
chr5 (13-98)||(41554436-41554521)
chr5 (14-98)||(8812231-8812315)
chr5 (12-98)||(37424941-37425028)
chr5 (23-98)||(28618564-28618639)
chr5 (2-98)||(2415339-2415435)
chr5 (19-95)||(4070512-4070586)
chr5 (10-98)||(9035027-9035115)
chr5 (30-98)||(19646120-19646188)
chr5 (50-98)||(29310428-29310476)
chr5 (19-98)||(6647992-6648071)
chr5 (168-222)||(33486497-33486551)
chr5 (2-97)||(34950414-34950511)
chr5 (15-92)||(41357990-41358067)
chr5 (17-98)||(41988138-41988219)
chr5 (161-220)||(35906394-35906453)
chr5 (159-193)||(20270809-20270843)
chr5 (168-222)||(20270846-20270900)
chr5 (161-207)||(34893887-34893933)
chr5 (168-220)||(4070683-4070735)
chr5 (161-193)||(22397533-22397565)
chr5 (168-220)||(29310284-29310336)
chr5 (18-98)||(15710495-15710577)
chr5 (172-222)||(18472654-18472704)
chr5 (168-222)||(22397476-22397530)
chr5 (161-239)||(28500814-28500891)
chr5 (12-98)||(34843862-34843951)
chr5 (43-97)||(40565235-40565289)
chr5 (12-98)||(41063475-41063559)
chr5 (168-222)||(41554619-41554673)
chr5 (29-86)||(8957177-8957234)
chr5 (12-89)||(28423887-28423963)
chr5 (163-191)||(2979413-2979441)
chr5 (168-220)||(4726858-4726910)
chr5 (52-88)||(4727017-4727053)
chr5 (168-220)||(6887108-6887160)
chr5 (161-193)||(15710296-15710328)
chr5 (163-191)||(19103574-19103602)
chr5 (168-220)||(31645961-31646013)
chr5 (161-193)||(33486554-33486586)
[»] scaffold0045 (1 HSPs)
scaffold0045 (12-98)||(9727-9813)
[»] scaffold0011 (1 HSPs)
scaffold0011 (7-98)||(10963-11054)
[»] scaffold0665 (1 HSPs)
scaffold0665 (2-95)||(1174-1266)
[»] scaffold1294 (1 HSPs)
scaffold1294 (12-98)||(729-815)
[»] scaffold0012 (2 HSPs)
scaffold0012 (2-98)||(244573-244671)
scaffold0012 (168-220)||(244768-244820)
[»] scaffold0112 (1 HSPs)
scaffold0112 (38-96)||(25595-25653)
[»] scaffold0018 (2 HSPs)
scaffold0018 (2-63)||(137173-137233)
scaffold0018 (161-193)||(137043-137075)
[»] scaffold0316 (1 HSPs)
scaffold0316 (168-220)||(12133-12185)
[»] scaffold0340 (1 HSPs)
scaffold0340 (45-98)||(11856-11909)
[»] scaffold0157 (1 HSPs)
scaffold0157 (161-190)||(1129-1158)
[»] scaffold0009 (1 HSPs)
scaffold0009 (19-96)||(105008-105085)
[»] scaffold0722 (1 HSPs)
scaffold0722 (168-220)||(5456-5508)


Alignment Details
Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 20201233 - 20201137
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20201233 tcttgtgagccgtcacgaaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacccaaaatcacccctctaac 20201137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 20203415 - 20203319
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20203415 tcttgtgagccgtcacgaaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacccaaaatcacccctctaac 20203319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 1165561 - 1165475
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1165561 cgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcacccctctaac 1165475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 42106060 - 42106146
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  42106060 cgtcaccaaaaccctagtttcttcatcttcatccaccaaagaggggtgatttagggtcaatttttgacctaaaatcacccatctaac 42106146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 43029628 - 43029718
Alignment:
Q  8 gagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  43029628 gagtcgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttaggatcattttttgacccaaaatcacccctctaac 43029718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 21803469 - 21803565
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||||||||||||||||||||| ||||| || |||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  21803469 tcttgtgagccgtcaccaaaaccctagtttcttctccttcatctaccaaagaggagtgattcagtgtcaatttttgacccaaaatcacccctctaac 21803565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 50519729 - 50519825
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||||  |||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  50519729 tcttgtgagccgtcacacaaaccctagtttcttctccttcatccaccaaagatgggtgatttagggtcaatttttgacccaaaatcacccctctaac 50519825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 913483 - 913397
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||    
T  913483 cgtcaccaaaaccttagtttcttcatcttcatccaccaaagaggggtaattcatagtcaatttttgacccaaaatcacccctctaac 913397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 40462160 - 40462074
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||| ||||||||||||||||||| | ||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  40462160 cgtcgccaaaaccctagtttcttctctttcatccaccaaagagtggtgatttagagtcaaattttgacccaaaatcacccctctaac 40462074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 35501933 - 35501838
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||||| ||| |||||||||||| ||||| |||||||||||||| |||||||| || |||||||||||||||||||||||||||||    
T  35501933 tcttgtgagccgtcaccgaaatcctagtttcttctccttcatccaccaaagaggg-tgatttagggttaatttttgacccaaaatcacccctctaac 35501838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 22286903 - 22286828
Alignment:
Q  23 ccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  22286903 ccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacctaaaattacccctctaac 22286828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 22844000 - 22844086
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||| ||| ||||| | || ||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  22844000 cgtcaccaaaaccctagtttattctccttcattcatcaaagagggctgatttaaggtcaatttttgacccaaaatcacccctctaac 22844086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 41882562 - 41882487
Alignment:
Q  23 ccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||| ||||| |||| |||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  41882562 ccctagtttcttctccttcatccatcaaagaggagtgatttagggtcaatttttgacccaaaattacccctctaac 41882487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 20251590 - 20251687
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtc-aatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||||| |||||||||||| ||| ||||| ||||||||||||||||||||||| ||| | ||||| |||||||||||||| ||||||    
T  20251590 tcttgtgagccgtcaccgaaaccctagtttattctccttcatccaccaaagaggggtgatttagggtcgatttttttacccaaaatcacccttctaac 20251687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 40796988 - 40797067
Alignment:
Q  18 caaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||| || || |||||| |||||||||||||||||||    
T  40796988 caaaaccctagtttcttcatcttcctccaccaaaaaggggtgatttagggttaa-ttttgagccaaaatcacccctctaac 40797067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 43839684 - 43839613
Alignment:
Q  9 agtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacc 80  Q
    ||||||| ||||||||||||||||||| ||||| | ||| ||||| ||||||||||| ||||||||||||||    
T  43839684 agtcgtcgccaaaaccctagtttcttctccttcattcactaaagatgggtgatttagggtcaatttttgacc 43839613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 1806617 - 1806540
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    |||||||| || ||||  |||| ||||||||||||||||| ||||| |||||||||||| || |||||||||||||||    
T  1806617 aaaccctacttccttcttcttcatccaccaaagaggggtggtttagggtcaatttttgatcccaaatcacccctctaa 1806540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 37051581 - 37051658
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    |||| ||| ||||||| | ||| |||||||||||||| |||||||| |||||||||||||||  ||||||||||||||    
T  37051581 aaactctaatttcttctctttcatccaccaaagagggatgatttagggtcaatttttgaccctgaatcacccctctaa 37051658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 11846564 - 11846650
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| |||||||||||||| ||| ||||| |||||| |||||| ||||| ||| || ||||||||| | |||||||||| ||||||    
T  11846564 cgtcatcaaaaccctagttttttctccttcatccacctaagaggagtgatatagggttaatttttgagcgaaaatcacccgtctaac 11846650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 25374234 - 25374149
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||| ||||| ||||||||||  ||||| | ||| ||||| ||||||||||| || ||||||||||| |||||||||||||||||    
T  25374234 cgtcactaaaactctagtttcttttccttcattcac-aaagaagggtgatttagggttaatttttgacctaaaatcacccctctaac 25374149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 27831054 - 27831146
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||||| |||||||| |||||||   ||| ||||||||||||||||||||| | ||||| |||||||| |||||||||| ||||||    
T  27831054 tcttgtgagccgtcaccgaaaccctaatttcttc---ttcatccaccaaagaggggtgatttggggtcaa-ttttgacctaaaatcacccatctaac 27831146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 2598045 - 2598118
Alignment:
Q  25 ctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||  ||||| ||||||||| || |||||||||  ||| ||||||||||||||||||| ||||||||    
T  2598045 ctagtttctttgccttcatccaccaaaaagaggtgatttaaagtcgatttttgacccaaaatcactcctctaac 2598118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 1220374 - 1220294
Alignment:
Q  18 caaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||| ||| ||||||| |||||  | | ||||||||||||||||||  |||||||||||  ||||||||||||||||||    
T  1220374 caaaactctaatttcttctccttcacctatcaaagaggggtgatttaggatcaatttttgattcaaaatcacccctctaac 1220294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 29776841 - 29776782
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaa 71  Q
    |||||| |||||| |||||| ||| ||||| ||||||||||||||||||||||| |||||    
T  29776841 cgtcactaaaaccttagttttttctccttcatccaccaaagaggggtgatttagggtcaa 29776782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 45664217 - 45664264
Alignment:
Q  51 agaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||    
T  45664217 agaggggtgatttaggatcaaattttgacccaaaatcacccctctaac 45664264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 53426760 - 53426839
Alignment:
Q  19 aaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||||||||||  | ||| |||| |||||| || |||||||| |||||||||| || ||||||||||||||||||    
T  53426760 aaaactctagtttcttttctttcatccatcaaagatggatgatttagggtcaattttttacgcaaaatcacccctctaac 53426839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 2598215 - 2598265
Alignment:
Q  172 tcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||| |||| ||||||||| | ||||||||||||||||||||||||||    
T  2598215 tcgtctttgtgcaacgttgtttctctttcttgtttcgttcatgtatttgtt 2598265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 22844184 - 22844238
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||||||||||| | |||||||||| ||||| |||||||||    
T  22844184 ttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcaggtatttgtt 22844238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 39340332 - 39340385
Alignment:
Q  169 tcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    |||||||||| ||||| |||||||| | |||||||||||||| |||||||||||    
T  39340332 tcgtcgtctttgtgcggcgttgtttgtctttcttgtttcgttaatgtatttgtt 39340385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 29182590 - 29182538
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  29182590 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttg 29182538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 37051721 - 37051753
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||||    
T  37051721 ttgtgatttcgtcgtcttagtgcgacgttgttt 37051753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 41882392 - 41882340
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  41882392 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 41882340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 43029815 - 43029867
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  43029815 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 43029867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 47914736 - 47914688
Alignment:
Q  24 cctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaat 72  Q
    |||| ||||||| ||||| ||||||||||||||||||||||| ||||||    
T  47914736 cctaatttcttctccttcatccaccaaagaggggtgatttagggtcaat 47914688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 50519915 - 50519967
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  50519915 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 50519967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 3088646 - 3088607
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  3088646 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 3088607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 22286733 - 22286694
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  22286733 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 22286694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 28995291 - 28995252
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  28995291 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 28995252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 4019587 - 4019636
Alignment:
Q  48 caaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||| ||||| ||||||| |||||||||| |||||||    
T  4019587 caaagaggggtgatttagggtcaa-ttttgactcaaaatcacctctctaac 4019636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 14741308 - 14741270
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgttt 206  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  14741308 ttcgtcgtctttgtgcgacgttgtttgtttttcttgttt 14741270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 191
Target Start/End: Complemental strand, 21289951 - 21289921
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||||    
T  21289951 ttgtgatttcgtcgtcttagtgcgacgttgt 21289921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 89
Target Start/End: Complemental strand, 25939598 - 25939564
Alignment:
Q  55 gggtgatttagcgtcaatttttgacccaaaatcac 89  Q
    ||||||||||| |||||||||||||||||||||||    
T  25939598 gggtgatttagggtcaatttttgacccaaaatcac 25939564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 29776672 - 29776618
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| || || |||||||| | |||||||||||||||| |||||||||    
T  29776672 ttcgtcgtctttgtacggcgttgtttgtctttcttgtttcgttcaggtatttgtt 29776618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 32237978 - 32237924
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| ||||| |||||||| | ||||| |||||||||| |||||||||    
T  32237978 ttcgtcgtctttgtgcggcgttgtttgtctttctagtttcgttcaggtatttgtt 32237924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 33978096 - 33978010
Alignment:
Q  1 ttcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatc 87  Q
    |||||| ||| |||||| ||||  ||||||||| | ||||| ||||| ||| |  |||||||||  |||||||||||||||||||||    
T  33978096 ttcttgtgagccgtcacaaaaattctagtttctcctccttcatccacaaaaaaatggtgatttaaggtcaatttttgacccaaaatc 33978010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 36540688 - 36540658
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||    
T  36540688 gtgatttcgtcgtcttagtgcgacgttgttt 36540658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 40797165 - 40797219
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||||||||||| | |||||||||| ||||  |||||||||    
T  40797165 ttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgtt 40797219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 27056056 - 27056003
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttag 65  Q
    |||||||||||||||| ||| ||| ||||| ||||||| ||| |||||||||||    
T  27056056 cgtcaccaaaaccctaattttttctccttcatccaccagagaagggtgatttag 27056003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 32089910 - 32089857
Alignment:
Q  170 cgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttt 223  Q
    ||||||||| ||| | | |||||| | |||||||||||||||||||||||||||    
T  32089910 cgtcgtctttgtggggcattgtttgtctttcttgtttcgttcatgtatttgttt 32089857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 1165378 - 1165326
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||| ||||||||| |||||||||||||  ||| |||||||    
T  1165378 ttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttg 1165326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 4019694 - 4019722
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  4019694 gtgatttcgtcgtcttagtgcgacgttgt 4019722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 7546567 - 7546595
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  7546567 gtgatttcgtcgtcttagtgcgacgttgt 7546595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 33977907 - 33977855
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| ||| |||||||||  ||| |||||||    
T  33977907 ttcgtcgtctttgtgcgacgttgtttgtttgtcttgtttctctcaggtatttg 33977855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 189
Target Start/End: Original strand, 53426895 - 53426923
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgtt 189  Q
    |||||||||||||||||||||||||||||    
T  53426895 ttgtgatttcgtcgtcttagtgcgacgtt 53426923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 16913277 - 16913363
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  16913277 cgtcaccaaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacccgaaatcacccctctaac 16913363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 32457598 - 32457681
Alignment:
Q  15 caccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||| |||||| ||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32457598 caccaaaaccttagttttttctccttcatctactaaagaggggtgatttagcgtcaatttttgacccaaaatcacccatctaac 32457681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 4663977 - 4663899
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  4663977 aaaccctaatttcttctccttcatccaccaaagaggggtgattgtgggtcaatttttgacccaaaatcacccctctaac 4663899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 10744541 - 10744614
Alignment:
Q  25 ctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||    
T  10744541 ctagtttcttcaccttcatccaccaaagatgggtgatttagggtcaacttttgacccaaaatcactcctctaac 10744614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 12576642 - 12576557
Alignment:
Q  13 gtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| |||| |||||||||||  ||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  12576642 gtcacaaaaatcctagtttcttttccttcatccacgaaagaggggtgatttagggtcaatttttgaccctaaatcacccctctaac 12576557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 7049186 - 7049278
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctc 94  Q
    ||||| ||| ||||||||||||| || ||| ||| ||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  7049186 tcttgtgagccgtcaccaaaaccataattttttctccttcatccaccaaagaggggtgatttagggtcaacttttgactcaaaatcacccctc 7049278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 32574392 - 32574488
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||||||||||||| ||||||| ||||| ||||||||| |  |||| ||||| |||||||||||||||||||| | |||||||||    
T  32574392 tcttgtgagccgtcaccaaaaccctattttcttctccttcatccaccaaatataggtgttttagagtcaatttttgacccaaaattaaccctctaac 32574488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 20844946 - 20845043
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagagggg-tgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||||||||||| |||||||||| ||||  || |||||||||||| | ||| |  ||||||||||||||||||||||||||||||||    
T  20844946 tcttgtgagccgtcaccaaaaccttagtttcttctcctttatctaccaaagagggggtaattcaaggtcaatttttgacccaaaatcacccctctaac 20845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 32804245 - 32804329
Alignment:
Q  13 gtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||| ||||  |||| ||| || |||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  32804245 gtcaccaaaaccctagttacttctacttcatcc-cctaagatgggtgatttagggtcaatttttgacccaaaatcacccatctaac 32804329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 8644194 - 8644272
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacc 90  Q
    ||||||||||||||||||||| |  ||||| |||| |||| | ||||||||||| |||||||||||||| |||||||||    
T  8644194 cgtcaccaaaaccctagtttcatttccttcatccatcaaaaatgggtgatttagggtcaatttttgaccaaaaatcacc 8644272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 19759777 - 19759823
Alignment:
Q  52 gaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  19759777 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaac 19759823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 15128316 - 15128228
Alignment:
Q  9 agtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||| | ||||||||||  |||| |||| ||||||  | |||||||| ||||||||||| ||||||||||||||||||||    
T  15128316 agtcgtcaccaaaatcttagtttcttctacttcatccatcaaagatagatgatttag-gtcaatttttgtcccaaaatcacccctctaac 15128228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 31804347 - 31804404
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| ||| |||||||    
T  31804347 gtgatttcgtcgtcttagtgcgacattgtttgtctttcttgtttcgctcaagtatttg 31804404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 32257923 - 32258009
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcac 89  Q
    ||||| |||||||||| |||| |||||||||||| | ||| |||| ||||||||| |||| ||  ||||||||||||||| |||||||    
T  32257923 tcttgtgagtcgtcactaaaatcctagtttcttctc-ttcatccatcaaagagggatgatgtaaggtcaatttttgacccgaaatcac 32258009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 549039 - 548944
Alignment:
Q  1 ttcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||| ||| ||||| ||||| |||| ||| ||| ||||| ||||| |  |||| ||||| ||  ||||||||||||||||||||||||||||||||    
T  549039 ttcttgtgagccgtcatcaaaatcctaattttttctccttcatccacta--gaggagtgatataaggtcaatttttgacccaaaatcacccctctaac 548944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 31748092 - 31748141
Alignment:
Q  171 gtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    |||||||| |||||||||||||| |||||||||||||  |||||||||||    
T  31748092 gtcgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttg 31748141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 34020582 - 34020643
Alignment:
Q  27 agtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatca 88  Q
    |||||||||  |||| || |||||||||||||| ||||| ||||||||||||||||| ||||    
T  34020582 agtttcttcttcttcatctaccaaagaggggtggtttagggtcaatttttgacccaacatca 34020643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 891551 - 891623
Alignment:
Q  26 tagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||| ||||| ||||  |||||| ||||||| || ||| |||||||||||||||| |||||| ||||    
T  891551 tagtttcttctccttcatccattaaagagaggtgattaagggtcgatttttgacccaaaattacccctataac 891623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 11426073 - 11426125
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  11426073 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 11426125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 13234090 - 13234038
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  13234090 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 13234038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 4663802 - 4663747
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttt 223  Q
    |||||| |||| ||||||| |||||| ||||| |||||||||||| ||||||||||    
T  4663802 ttcgtcatctttgtgcgactttgtttttttttattgtttcgttcaggtatttgttt 4663747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 13234233 - 13234194
Alignment:
Q  51 agaggggtgatttagcgtcaatttttgacccaaaatcacc 90  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  13234233 agaggggtgatttagggtcaatttttgacctaaaatcacc 13234194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 12652179 - 12652125
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    |||||||| ||  ||||| ||||||| | ||||||||||||||||||||||||||    
T  12652179 ttcgtcgtatttctgcgatgttgtttttctttcttgtttcgttcatgtatttgtt 12652125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 190
Target Start/End: Complemental strand, 15128170 - 15128141
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttg 190  Q
    ||||||||||||||||||||||||||||||    
T  15128170 ttgtgatttcgtcgtcttagtgcgacgttg 15128141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 32804445 - 32804482
Alignment:
Q  186 cgttgtttatttttcttgtttcgttcatgtatttgttt 223  Q
    |||||||| | |||||||||||||||||||||||||||    
T  32804445 cgttgtttgtctttcttgtttcgttcatgtatttgttt 32804482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 1523363 - 1523391
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  1523363 gtgatttcgtcgtcttagtgcgacgttgt 1523391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 189
Target Start/End: Complemental strand, 4663837 - 4663809
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgtt 189  Q
    |||||||||||||||||||||||||||||    
T  4663837 ttgtgatttcgtcgtcttagtgcgacgtt 4663809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 5544839 - 5544902
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttttggttcaga 232  Q
    ||||||||||| ||| |||||||||| | |||||| ||||||||| || |||| |||||||||||    
T  5544839 ttcgtcgtctttgtgtgacgttgtttgtctttcttatttcgttcaggtgtttg-tttggttcaga 5544902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 10744680 - 10744712
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||| ||||||    
T  10744680 ttgtgatttcgtcgtcttagtgcgaccttgttt 10744712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 12576463 - 12576411
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||| ||||||||  ||| |||||||    
T  12576463 ttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttg 12576411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 19759924 - 19759972
Alignment:
Q  172 tcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||| |||||||||||||| | |||||||||||  |||||||||||    
T  19759924 tcgtctttgtgcgacgttgtttgtatttcttgtttctctcatgtatttg 19759972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 30776627 - 30776655
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  30776627 gtgatttcgtcgtcttagtgcgacgttgt 30776655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 9661802 - 9661888
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9661802 cgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcacccctctaac 9661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 4634227 - 4634318
Alignment:
Q  7 agagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||| |||||||||||||||||||||||| ||||| |||| |||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  4634227 agagccgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttaaggtcaatttttgacccaaaatcacccctctaac 4634318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 1657745 - 1657650
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||| ||| |||||| ||||||||||||||||| ||||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  1657745 tcttgtgagacgtcactaaaaccctagtttcttctccttcatccatcaaagagaggtgatttagggtcaatttttgacccaaaatcacccctctaa 1657650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 16991825 - 16991907
Alignment:
Q  16 accaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||| ||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  16991825 accaaaaccctagtttcttctccttcatccatcaaagagcggtgatttagggtcaatttttgacccaaaatcacccatctaac 16991907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 28588510 - 28588596
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||| |||||||||||| ||||| |||| || ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  28588510 cgtcaccaaaatcctagtttcttctccttcatccatcatagaagggtgatttagggtcaatttttgacccaaaatcacccctctaac 28588596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 54420868 - 54420791
Alignment:
Q  21 aaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  54420868 aaccctagtttcttctccttcatccaccaaagatgggtgatttagggtcaatttttgacccaaaatcactcctctaac 54420791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 46729084 - 46729005
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcaccc 91  Q
    ||||| |||||| ||||||| ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46729084 cgtcatcaaaactctagttttttcactttcatccaccaaagaggggtgatttagggtcaatttttgacccaaaatcaccc 46729005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 43156742 - 43156812
Alignment:
Q  29 tttcttcaccttcgtccaccaaagaggggtgattta-gcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  43156742 tttcttctccttcatccaccaaagaggggtgatttacgggtcaatttttgacccaaaatcacccctctaac 43156812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 3673580 - 3673657
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    |||||||| ||||||| | ||  ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  3673580 aaaccctactttcttctcatttatccaccaaagaggggtgatttagggtcaatttttgaccccaaatcacccctctaa 3673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 1646106 - 1646020
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||| |||||||||||||||||  |||| | |||||||||| | |||||||| || |||| ||||||||||||||||||||||||    
T  1646106 cgtcactaaaaccctagtttcttcttcttcattcaccaaagagagatgatttagggttaattgttgacccaaaatcacccctctaac 1646020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 6408378 - 6408467
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagagg-ggtgatttagcgtcaatttttgacccaaaatcacc 90  Q
    ||||| ||||||||| ||| || ||||||||||| ||||| ||||||||||||| ||||||| || |||||||||| |||||||||||||    
T  6408378 tcttgtgagtcgtcatcaatactctagtttcttctccttcatccaccaaagaggaggtgattaagggtcaattttttacccaaaatcacc 6408467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 51646043 - 51646127
Alignment:
Q  13 gtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||| ||||||||| ||||||||||||| |||| ||||||| | |||||||  |||||||||| ||| ||||||||||||||||    
T  51646043 gtcacaaaaaccctactttcttcaccttcatccatcaaagagagatgatttatggtcaatttttaacctaaaatcacccctctaa 51646127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 3168996 - 3169075
Alignment:
Q  19 aaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||||||| |||  |||| | |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  3168996 aaaactctagttttttcttcttcattcaccaaagagaggtgatttagagtcaattattgacccaaaatcacccctctaac 3169075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 14542658 - 14542591
Alignment:
Q  31 tcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||||| |||| |||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  14542658 tcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcatctctctaac 14542591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 40859610 - 40859669
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaa 71  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||    
T  40859610 cgtcaccaaaaccctagtttcttcgtcttcatccaccaaagaggggtgatttagggtcaa 40859669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 7242929 - 7242856
Alignment:
Q  14 tcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacc 90  Q
    ||||||||||||||||||||||   ||  ||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  7242929 tcaccaaaaccctagtttcttc---tttatccaccaaaaaggggcgatttagggtcaatttttgacccaaaatcacc 7242856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 30416783 - 30416701
Alignment:
Q  16 accaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||  |||||||||||| |||| ||||||||| |||||| |||||  |||||||||||| |||||||||| ||||||||    
T  30416783 accaaaattctagtttcttcatcttcatccaccaaaaaggggtaatttatggtcaatttttgaaccaaaatcacacctctaac 30416701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 37869591 - 37869496
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||||||||||||||||||||| ||||| ||||  ||||||  ||||||||| ||||||| || | ||||||||| |||||||||    
T  37869591 tcttgtgagccgtcaccaaaaccctagtttcttctccttcatccattaaagagatgtgatttagggtcaattgttta-ccaaaatcatccctctaac 37869496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 41486555 - 41486610
Alignment:
Q  43 tccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||| ||||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  41486555 tccatcaaagaggggttatttagggtcaatttttgatccaaaatcacccctctaac 41486610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 23067973 - 23067927
Alignment:
Q  52 gaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  23067973 gaggggtgatttagggtcaatttttgaccctaaatcacccctctaac 23067927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 29474310 - 29474256
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||    
T  29474310 ttcgtcgtctttgtgcgacgttgtttgcttttcttgtttcgttcaggtatttgtt 29474256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 54420730 - 54420684
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  54420730 ttgtgatttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 54420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 9474684 - 9474623
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgattt 63  Q
    ||||| ||| |||||||||||||||||||||||| ||||| || ||||||||||| ||||||    
T  9474684 tcttgtgagccgtcaccaaaaccctagtttcttctccttcatcaaccaaagagggatgattt 9474623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 15730129 - 15730084
Alignment:
Q  18 caaaaccctagtttcttcaccttcgtccaccaaagaggggtgattt 63  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  15730129 caaaaccctagtttctttaccttcatccaccaaagaggggtgattt 15730084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 38546285 - 38546191
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||||| ||||||||| |||||||||||  || || || | |||||||||| ||||||  ||||||||  ||||||||||||||||||||||    
T  38546285 tcttgtgagtcatcaccaaaatcctagtttcttttccgtcatctatcaaagaggggagatttaaggtcaattt--gacccaaaatcacccctctaac 38546191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 4622877 - 4622798
Alignment:
Q  10 gtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacc 90  Q
    |||||||||||||| |||||||||||  |||| || |  ||||||||||||||||  |||||||||||| |||||||||||    
T  4622877 gtcgtcaccaaaactctagtttcttcttcttcatcaat-aaagaggggtgatttaaggtcaatttttgatccaaaatcacc 4622798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 11817038 - 11817105
Alignment:
Q  29 tttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctcta 96  Q
    |||||||  |||| |||| |||||||||||| ||||| || || ||||||||||||||||||||||||    
T  11817038 tttcttcttcttcatccatcaaagaggggtggtttagggttaagttttgacccaaaatcacccctcta 11817105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 34115800 - 34115733
Alignment:
Q  29 tttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctcta 96  Q
    ||||||| | ||| || ||||||||| | | |||||| ||||||||||||||||||||||||||||||    
T  34115800 tttcttctcattcatctaccaaagagagataatttagggtcaatttttgacccaaaatcacccctcta 34115733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 15729963 - 15729909
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| ||||||||||||||   |||||||||||||||| |||||||||    
T  15729963 ttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgtt 15729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 38434731 - 38434785
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| || ||||||||||| | |||||||||||||||| |||||||||    
T  38434731 ttcgtcgtctttgtccgacgttgtttgtctttcttgtttcgttcaggtatttgtt 38434785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 52555846 - 52555800
Alignment:
Q  52 gaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||    
T  52555846 gaggggtgatttagggacaatttttgacccaaaatcacctctctaac 52555800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 4634415 - 4634467
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  4634415 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 4634467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 5388501 - 5388549
Alignment:
Q  49 aaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||||||||||||||| |||||||||||| |  |||||||||||||||    
T  5388501 aaagaggggtgatttagggtcaatttttgaactcaaatcacccctctaa 5388549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 9661985 - 9662037
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  9661985 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 9662037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 14346563 - 14346615
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||| | |||||||||||||| | |||||||||||||||| |||||||    
T  14346563 ttcgtcgtcgttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttg 14346615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 14542494 - 14542442
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  14542494 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 14542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 33021083 - 33021011
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccc 92  Q
    |||||||| |||  || ||||| ||||||||||||||||| ||| | ||||| ||||||||| ||||||||||    
T  33021083 aaaccctaattttatctccttcatccaccaaagaggggtggttttgggtcaaattttgaccccaaatcacccc 33021011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 38434696 - 38434728
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||||    
T  38434696 ttgtgatttcgtcgtcttagtgcgacgttgttt 38434728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 9474521 - 9474482
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  9474521 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 9474482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 32189112 - 32189151
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  32189112 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 32189151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 42972030 - 42972073
Alignment:
Q  55 gggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||| ||||||||||||||||||||||| | ||||||    
T  42972030 gggtgatttagggtcaatttttgacccaaaatcactcatctaac 42972073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 53903706 - 53903765
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    |||||||||||||||||| || ||||||||||| |||||| ||||||  ||| |||||||    
T  53903706 ttgtgatttcgtcgtcttcgtacgacgttgtttgtttttcctgtttctctcaggtatttg 53903765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 4959543 - 4959501
Alignment:
Q  180 gtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    |||||||||||||| | ||||||||||||||| ||||||||||    
T  4959543 gtgcgacgttgtttgtctttcttgtttcgttcctgtatttgtt 4959501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 7242751 - 7242697
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||| ||||||| | |||||| ||||||||| |||||||||    
T  7242751 ttcgtcgtctttgtgcgaagttgtttgtctttcttatttcgttcaagtatttgtt 7242697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 29577260 - 29577166
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctcta 96  Q
    ||||| ||| ||||||||||| |||| ||| ||  ||||| ||||  ||| ||||||||||||| |||| |||||||| ||||||  ||||||||    
T  29577260 tcttgtgagccgtcaccaaaatcctaatttattttccttcatccataaaaaaggggtgatttagggtcactttttgactcaaaatatcccctcta 29577166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 40859806 - 40859860
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||||||||||| | |||||||||| ||||  |||||||||    
T  40859806 ttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgtt 40859860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 43156908 - 43156962
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||| ||| |||||||||||||| | ||||||||||| |||| |||||||||    
T  43156908 ttcgtcgactttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgtt 43156962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 46728902 - 46728848
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| || |||||||||||   |||||||||||||||| |||||||||    
T  46728902 ttcgtcgtctttgtacgacgttgtttgcctttcttgtttcgttcaggtatttgtt 46728848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 51646226 - 51646280
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||| ||||||| | |||||||||||| ||| |||||||||    
T  51646226 ttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgctcaagtatttgtt 51646280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 190
Target Start/End: Original strand, 12519753 - 12519782
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttg 190  Q
    ||||||||||||||||||||||||||||||    
T  12519753 ttgtgatttcgtcgtcttagtgcgacgttg 12519782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 194
Target Start/End: Complemental strand, 46775873 - 46775840
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttta 194  Q
    |||||||||||||||||||||| |||||||||||    
T  46775873 ttgtgatttcgtcgtcttagtgtgacgttgttta 46775840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 1125076 - 1125128
Alignment:
Q  171 gtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttt 223  Q
    ||||||||  |||||||||| || | |||||||||||||||| ||||||||||    
T  1125076 gtcgtctttttgcgacgttgattgtctttcttgtttcgttcaggtatttgttt 1125128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 1657583 - 1657551
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||| ||||||    
T  1657583 ttgtgatttcgtcgtcttagtgcgacattgttt 1657551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 9549426 - 9549478
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgattta 64  Q
    ||||| ||||||| |||||||||| | ||| ||||||||| ||||||||||||    
T  9549426 cgtcatcaaaaccttagtttcttctcattcatccaccaaataggggtgattta 9549478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 15729998 - 15729966
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||| ||||||    
T  15729998 ttgtgatttcgtcgtcttagtgcgaccttgttt 15729966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 23067830 - 23067778
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| | |||||||||||  ||| |||||||    
T  23067830 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 23067778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 29589378 - 29589346
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||| ||||||||||||||||||||||||||||    
T  29589378 ttgttatttcgtcgtcttagtgcgacgttgttt 29589346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 30470102 - 30470066
Alignment:
Q  171 gtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    |||||||| |||||||||||||| |||||||||||||    
T  30470102 gtcgtctttgtgcgacgttgtttgtttttcttgtttc 30470066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 31891422 - 31891394
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  31891422 gtgatttcgtcgtcttagtgcgacgttgt 31891394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 43156873 - 43156905
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    ||||||||||||||||||||||| |||||||||    
T  43156873 ttgtgatttcgtcgtcttagtgcaacgttgttt 43156905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 46716876 - 46716824
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| | |||||||||||  ||| |||||||    
T  46716876 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 46716824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 46728937 - 46728905
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||| ||||||    
T  46728937 ttgtgatttcgtcgtcttagtgcgaccttgttt 46728905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 3390381 - 3390467
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3390381 cgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcacccctctaac 3390467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 25771394 - 25771480
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25771394 cgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcacccctctaac 25771480  T

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Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 10588988 - 10589073
Alignment:
Q  13 gtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||| ||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  10588988 gtcaccaaaatcctagtttcttcatcttcatccaccaaaaaggggtgatttagggtcaatttttgacccaaaatcacccctctaac 10589073  T

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Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 40125328 - 40125424
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||| ||||||| |||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  40125328 tcttgtgagccgtcatcaaaaccttagtttcttctccttcatccaccaaagaggggtgatttagggttaatttttgacccaaaatcacccctctaac 40125424  T

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Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 25516451 - 25516529
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  25516451 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatatttgacccaaaatcacccctctaac 25516529  T

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Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 27024308 - 27024218
Alignment:
Q  8 gagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| ||||||||||| ||||| |||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  27024308 gagtcgtcaccaaaactctagtttcttctccttcatccatcaaagatgggtgatttagggtcattttttgacccaaaatcacccctctaac 27024218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 27191492 - 27191414
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  27191492 aaaccctagtttcttctccttcatccaccaaagagggatgatttagggtcaatttttgaccctaaatcacccctctaac 27191414  T

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Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 27841306 - 27841228
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  27841306 aaaccctagtttcttctccttcatccaccaaagagggatgatttagggtcaatttttgaccctaaatcacccctctaac 27841228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 41176819 - 41176897
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||    
T  41176819 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacccaaaaccacccatctaac 41176897  T

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Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 44167884 - 44167788
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||||  || ||||||||||||| ||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  44167884 tcttgtgagccgtcacacaagccctagtttcttctccttcatccaccaaagaggggtgatatatggtcaatttttgacccaaaatcacccctctaac 44167788  T

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Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 6089844 - 6089927
Alignment:
Q  14 tcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    |||| ||||||||| ||||||| ||||| |||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  6089844 tcacaaaaaccctaatttcttctccttcatccatcaaagaggggtgatttaaggtcaatttttgacccaaaatcacccctctaa 6089927  T

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Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 19581168 - 19581082
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||| |||||| ||||||||| ||||| ||||||||||||||| | |||||||||| || ||||||||||||||||||    
T  19581168 cgtcaccaaaaccttagttttttcaccttcatccactaaagaggggtgattttgggtcaatttttaacacaaaatcacccctctaac 19581082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 5930369 - 5930458
Alignment:
Q  9 agtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||| |||| | ||||| ||||| |||||||||||| |||||||||| || ||||||||||||||||||| |||||||||    
T  5930369 agtcgtcaccaaaatcctaatatcttctccttcatccaccaaagagaggtgatttagggttaatttttgacccaaaatcatccctctaac 5930458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 3602924 - 3603020
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||||||||| |||||||||||| ||||| |||| |||||| ||||||||||  ||||| ||||||| ||||||||||||||||||    
T  3602924 tcttgtgagccgtcaccaaaatcctagtttcttctccttcatccatcaaagatgggtgatttatggtcaacttttgactcaaaatcacccctctaac 3603020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 37883592 - 37883687
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||| ||| |||||| |||| | || ||||||| ||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  37883592 tcttgtgagccgtcactaaaatcataatttcttctccttcatccaccaaagaggggtgatttagggtcaatttttaatccaaaatcacccctctaa 37883687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 42105917 - 42105831
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||| ||||||||| ||| ||  ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  42105917 cgtcacaaaaaccctaatttattttccttcatccaccaaagaggggtgctttagggtcaatttttgacccaaaatcaccactctaac 42105831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 43566834 - 43566904
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcaccc 91  Q
    ||||| |||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  43566834 aaaccatagtttcttctccttcatccaccaaagaggggtga-ttagggtcaatttttgacccaaaatcaccc 43566904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 3464916 - 3464986
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacc 90  Q
    |||| ||| ||||||| ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  3464916 aaactctaatttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgatccaaaatcacc 3464986  T

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Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 29812766 - 29812694
Alignment:
Q  26 tagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||| || |||||| |||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  29812766 tagtttatttaccttcatccatcaaagagaggtgatttagggtcaatttttgacacaaaatcacccctctaac 29812694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 36507891 - 36507963
Alignment:
Q  23 ccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctct 95  Q
    ||||||||||||| ||||| |||||||||||  ||||| |||| |||||||||||||||||||||||| ||||    
T  36507891 ccctagtttcttctccttcatccaccaaagaatggtgacttagggtcaatttttgacccaaaatcacctctct 36507963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 7640481 - 7640435
Alignment:
Q  52 gaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  7640481 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaac 7640435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 4878860 - 4878795
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttg 77  Q
    |||||||||||| |||||||||||||||||  ||| |||||||||||||||||| ||||| |||||    
T  4878860 cgtcaccaaaactctagtttcttcaccttcacccatcaaagaggggtgatttagggtcaacttttg 4878795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 15674102 - 15674053
Alignment:
Q  49 aaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  15674102 aaagaggggtgatttagggtcaatttttgacccaaaatcactcctctaac 15674053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 26491261 - 26491338
Alignment:
Q  21 aaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||| |||||||||| || || |||||||||||||||| |||||   |||||||||||||||||||||||||| ||||    
T  26491261 aaccttagtttcttctccatcatccaccaaagaggggtaatttaagttcaatttttgacccaaaatcacccctttaac 26491338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 25623207 - 25623131
Alignment:
Q  15 caccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcaccc 91  Q
    ||||||||||||||||||||   |||| | || |||||||||||||||||   ||||||||||||||||||||||||    
T  25623207 caccaaaaccctagtttctttttcttcatacatcaaagaggggtgatttattatcaatttttgacccaaaatcaccc 25623131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 3465054 - 3465113
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  3465054 ttgtgatttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttg 3465113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 44951457 - 44951512
Alignment:
Q  18 caaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatt 73  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  44951457 caaaatcctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatt 44951512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 24500619 - 24500673
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||||||||||| | |||||||||| |||||||||||||||    
T  24500619 ttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcatgtatttgtt 24500673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 24500461 - 24500530
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaa 71  Q
    ||||| ||| ||||||||||||| || ||||||||||||| ||||| ||||| ||||||||||| |||||    
T  24500461 tcttgggagccgtcaccaaaaccttaatttcttcaccttcatccactaaagatgggtgatttagggtcaa 24500530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 34479907 - 34479984
Alignment:
Q  14 tcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcaccc 91  Q
    |||||||||| ||||||||||| | ||| |||| |||||| || |||| ||| |||||||||| ||||||||||||||    
T  34479907 tcaccaaaactctagtttcttctcattcatccatcaaagatggatgatatagggtcaattttttacccaaaatcaccc 34479984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 41841900 - 41841985
Alignment:
Q  14 tcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgaccc-aaaatcacccctctaac 98  Q
    |||||||||| ||||||| ||| ||||| |||| || |||||| |||||||  ||||||||||||||| |||||||||||| ||||    
T  41841900 tcaccaaaactctagttttttctccttcatccatcatagagggttgatttatggtcaatttttgacccaaaaatcacccctttaac 41841985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 16880087 - 16880041
Alignment:
Q  49 aaagaggggtgatttagcgtcaatttttgacccaaaatcacccctct 95  Q
    |||||||||||||||   |||||||||||||||||||||||||||||    
T  16880087 aaagaggggtgatttttggtcaatttttgacccaaaatcacccctct 16880041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 19580984 - 19580930
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||||||||||| ||||| |||||| ||||| |||||||||    
T  19580984 ttcgtcgtctttgtgcgacgttgtttgttttttttgttttgttcaggtatttgtt 19580930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 15673949 - 15673896
Alignment:
Q  169 tcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    |||||||||| |||||||||||||| | |||||||||||||||| || ||||||    
T  15673949 tcgtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtttttgtt 15673896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 44441335 - 44441412
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcac 89  Q
    ||||||||||||  || ||| ||| | ||| |||| |||||| |||||| |||| |||||||||||||||||||||||    
T  44441335 cgtcaccaaaactttaattttttctctttcatccatcaaagatgggtgacttagagtcaatttttgacccaaaatcac 44441412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 5930555 - 5930607
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    |||||||| || |||||||||||||| |||||||||||||  |||||||||||    
T  5930555 ttcgtcgtttttgtgcgacgttgtttgtttttcttgtttctatcatgtatttg 5930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 9715706 - 9715634
Alignment:
Q  16 accaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatca 88  Q
    ||||| |||||||||| ||| | ||| |||| |||| | ||||||||||| |||||||||||| |||||||||    
T  9715706 accaataccctagttttttctctttcatccatcaaaaatgggtgatttagggtcaatttttgatccaaaatca 9715634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 16879947 - 16879895
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  16879947 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 16879895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 16992080 - 16992028
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  16992080 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 16992028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 25771577 - 25771629
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  25771577 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 25771629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 27024121 - 27024069
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  27024121 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 27024069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 27191319 - 27191267
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  27191319 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 27191267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 27841133 - 27841081
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  27841133 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 27841081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 38822204 - 38822256
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  38822204 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 38822256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 41176990 - 41177042
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  41176990 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttg 41177042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 44167693 - 44167653
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcg 208  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  44167693 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttcg 44167653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3398158 - 3398060
Alignment:
Q  1 ttcttgagagtcgtcacc-aaaaccctagtttcttcaccttcgtccaccaaaga--ggggtgatttagcgtcaatttttgacccaaaatcacccctcta 96  Q
    |||||| ||||||||| | ||||||||| ||| |||  |||| |||||||||||  |||||| ||||  ||||||||||||||| | ||||||||||||    
T  3398158 ttcttgtgagtcgtcagctaaaaccctatttttttcttcttcatccaccaaagaagggggtggtttaaggtcaatttttgaccccagatcacccctcta 3398060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 4878718 - 4878648
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttttggttcagattttcat 239  Q
    ||||||||||| |||||||||||||| | ||||||| |||||| | ||||||| || |||||||||| ||||    
T  4878718 ttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttg-ttcggttcagattgtcat 4878648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 25237484 - 25237413
Alignment:
Q  19 aaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacc 90  Q
    ||||| ||||||| ||| ||||| || |  ||||||||||||||||| ||||| |||||| |||||||||||    
T  25237484 aaaactctagtttattctccttcatctattaaagaggggtgatttagagtcaacttttgatccaaaatcacc 25237413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 35353637 - 35353680
Alignment:
Q  48 caaagaggggtgatttagcgtcaatttttgacccaaaatcaccc 91  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||    
T  35353637 caaagaggggtggtttagggtcaatttttgaccccaaatcaccc 35353680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 43567005 - 43567044
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  43567005 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 43567044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 7443548 - 7443494
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||||||||||| | |||||||||| ||||  |||||||||    
T  7443548 ttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgtt 7443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 10589227 - 10589281
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||||||||||| | |||||||||| ||||  |||||||||    
T  10589227 ttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgtt 10589281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 16720830 - 16720776
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| ||| |||||||||| ||||||||||| | |||| |||||||||    
T  16720830 ttcgtcgtctttgtgtgacgttgtttgtttttcttgttactttcaggtatttgtt 16720776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 26491401 - 26491431
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||    
T  26491401 gtgatttcgtcgtcttagtgcgacgttgttt 26491431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 35353742 - 35353772
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||    
T  35353742 gtgatttcgtcgtcttagtgcgacgttgttt 35353772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 37883785 - 37883839
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||| ||||||| | |||||||||||||| | |||||||||    
T  37883785 ttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgttgacgtatttgtt 37883839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 19953364 - 19953405
Alignment:
Q  43 tccaccaaagaggggtgatttagcgtcaatttttgacccaaa 84  Q
    |||| |||||||||||||||||  ||||||||||||||||||    
T  19953364 tccatcaaagaggggtgatttatggtcaatttttgacccaaa 19953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 25237340 - 25237311
Alignment:
Q  164 tgatttcgtcgtcttagtgcgacgttgttt 193  Q
    ||||||||||||||||||||||||||||||    
T  25237340 tgatttcgtcgtcttagtgcgacgttgttt 25237311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 32909015 - 32909064
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaa 51  Q
    ||||| ||| |||||||||||||||||||||||| ||||| |||| ||||    
T  32909015 tcttgtgagccgtcaccaaaaccctagtttcttctccttcatccatcaaa 32909064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 190
Target Start/End: Original strand, 41842045 - 41842074
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttg 190  Q
    ||||||||||||||||||||||||||||||    
T  41842045 ttgtgatttcgtcgtcttagtgcgacgttg 41842074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 2251362 - 2251330
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    ||||||||||||||||||||||||||| |||||    
T  2251362 ttgtgatttcgtcgtcttagtgcgacgctgttt 2251330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 3308909 - 3308937
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  3308909 gtgatttcgtcgtcttagtgcgacgttgt 3308937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 7640338 - 7640286
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| | |||||||||||  ||| |||||||    
T  7640338 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 7640286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 10237352 - 10237324
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  10237352 gtgatttcgtcgtcttagtgcgacgttgt 10237324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 16720992 - 16720916
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttga 78  Q
    ||||| ||| ||||||||||| ||||||||  |  ||||| |||| || |||| |||||||||| ||||||||||||    
T  16720992 tcttgggagccgtcaccaaaatcctagttttctttccttcatccatcagagagaggtgatttagggtcaatttttga 16720916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 17037777 - 17037737
Alignment:
Q  49 aaagaggggtgatttagcgtcaatttttgacccaaaatcac 89  Q
    |||||||||||||||   |||||||||||||||||||||||    
T  17037777 aaagaggggtgatttttggtcaatttttgacccaaaatcac 17037737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 25516624 - 25516676
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| ||||||| |||||| |||||||||||||  ||| |||||||    
T  25516624 ttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttg 25516676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 36508061 - 36508113
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||| ||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  36508061 ttcgttgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 36508113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 43929282 - 43929230
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| | |||||||||||  ||| |||||||    
T  43929282 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctatcaggtatttg 43929230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 44951551 - 44951603
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| || ||||||||||| |||||||||||||  ||| |||||||    
T  44951551 ttcgtcgtctttgtacgacgttgtttgtttttcttgtttctctcaggtatttg 44951603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 16937504 - 16937418
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||    
T  16937504 cgtcatcaaaaccctagtttcttcaccttcatccaccaaagaggggtgatttagggtcaatttttgatccaaaatcatccctctaac 16937418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 9269960 - 9270056
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  9269960 tcttgtgagccgtcacgaaaactctagtttcttctccttcatccaccaaagaggggtgatttatgatcaatttttgacccaaaatcacccctctaac 9270056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 37658917 - 37659000
Alignment:
Q  14 tcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    |||||||||||||| ||| ||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  37658917 tcaccaaaaccctaattttttcactttcatccaccaaagaggggtgatttagggtcaatttttgacacaaaatcacccctctaa 37659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 31874041 - 31874119
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| ||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  31874041 aaaccctagtttcttctccttcatccatcaaagagaggtgatttagggtcaatttttgacccaaaatcacccctctaac 31874119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 10042717 - 10042796
Alignment:
Q  19 aaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||  ||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  10042717 aaaaccctagttcattctccttcatccaccaaagaggggtgatttatggtcaatttttgacccaaaatcacccctctaac 10042796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 15665488 - 15665574
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||| ||||||||||  ||||| |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  15665488 cgtcaccaaaactctagtttctttcccttcatccaacaaagaggggtgatttagggtcaacttttgacacaaaatcacccctctaac 15665574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 32256887 - 32256800
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaa-tttttgacccaaaatcacccctctaac 98  Q
    ||||| ||||| |||||||| |||| |||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  32256887 cgtcatcaaaatcctagttttttcatcttcatccaccaaagaggggtgatttagggtcaatttttttacccaaaatcacccctctaac 32256800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 23766681 - 23766770
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcaccc 91  Q
    ||||| |||||||||| ||||| |||||||||||  |||| ||||||||||||  ||||||||  |||||||||||||||||||||||||    
T  23766681 tcttgtgagtcgtcacaaaaactctagtttcttctacttcatccaccaaagagatgtgatttaaggtcaatttttgacccaaaatcaccc 23766770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 36545934 - 36545860
Alignment:
Q  24 cctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||| ||||| |||||||||||||| |||||||  |||||||| |||||||| ||||||||||||||    
T  36545934 cctagtttcttctccttcatccaccaaagagggatgatttaaggtcaatttgtgacccaatatcacccctctaac 36545860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 14115967 - 14115875
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctct 95  Q
    ||||| ||| ||||||| |||| |||||| |||| | ||| ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  14115967 tcttgtgagccgtcacctaaactctagttacttctctttcatccaccaaagatgggtgatttag-gtcaatttttgacccaaaatcatccctct 14115875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 32061751 - 32061828
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    |||||||| ||||||| ||||| ||||||||||||||||  ||||| ||||||||||||||| ||||||||| |||||    
T  32061751 aaaccctaatttcttctccttcatccaccaaagaggggtagtttagggtcaatttttgaccccaaatcacccttctaa 32061828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 9992604 - 9992700
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||||||| ||| || ||||||| ||||| | ||  | || |||||||||||| ||||||||||||||||||||||||||||||||    
T  9992604 tcttgtgagccgtcaccaagaccataatttcttctccttcattcattagaggggggtgatttagggtcaatttttgacccaaaatcacccctctaac 9992700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 37719790 - 37719877
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcac 89  Q
    ||||| ||| |||| | ||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||||||| | ||||||||    
T  37719790 tcttgtgagccgtctctaaaaccctagtttcttctccttcatccaccaaggacgggtgatttagggtcaatttttgaactaaaatcac 37719877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 44295284 - 44295351
Alignment:
Q  31 tcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||||| |||| |||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  44295284 tcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcatctctctaac 44295351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 14327436 - 14327510
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctc 94  Q
    |||| ||| ||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||| || |||||||||    
T  14327436 aaacgctaatttcttctccttcatccaccaaagaggggtggtttagggtcaatttttgaccccaattcacccctc 14327510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 31713200 - 31713135
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttg 77  Q
    |||||||||||| |||||||||||||||||  ||| |||||||||||||||||| ||||| |||||    
T  31713200 cgtcaccaaaactctagtttcttcaccttcacccatcaaagaggggtgatttagggtcaacttttg 31713135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 3680872 - 3680958
Alignment:
Q  14 tcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaa--tttttgacccaaaatcacccctctaac 98  Q
    ||||||| || ||||||||||| | ||| ||||||||||||||||||||||| |||||  ||||| ||||||||||||  |||||||    
T  3680872 tcaccaatacactagtttcttctctttcatccaccaaagaggggtgatttagagtcaatttttttcacccaaaatcacttctctaac 3680958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 13864307 - 13864386
Alignment:
Q  11 tcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacc 90  Q
    |||| |||||||||||||||||||| ||||| |  | |||||||||||||||||  ||||| |||||| |||||||||||    
T  13864307 tcgttaccaaaaccctagtttcttctccttcatttatcaaagaggggtgatttaaggtcaacttttgagccaaaatcacc 13864386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 26937486 - 26937560
Alignment:
Q  24 cctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||  ||| | |||||||||||||||| |||||| || || ||||||| ||||||||||||||||||    
T  26937486 cctagtttcttatcctgcatccaccaaagaggggttatttagggttaagttttgactcaaaatcacccctctaac 26937560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 8054933 - 8054887
Alignment:
Q  52 gaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||| |||||||||||||||||||| | |||||||||    
T  8054933 gaggggtgatttagggtcaatttttgacccaaaattatccctctaac 8054887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 10042904 - 10042958
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||| |||||||||||||||| ||| | |||||||||||||||| |||||||||    
T  10042904 ttcgttgtcttagtgcgacgttatttgtctttcttgtttcgttcaggtatttgtt 10042958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 12248696 - 12248642
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||||||||||| | ||||||||||| |||| |||||||||    
T  12248696 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgtt 12248642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 9270153 - 9270205
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  9270153 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 9270205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 31147962 - 31147891
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaat 86  Q
    ||||| ||||||||||||||||   ||||| | || |||||| || |||||||| ||||||||||||||||||||    
T  31147962 cgtcatcaaaaccctagtttct---ccttcattcatcaaagaaggatgatttagggtcaatttttgacccaaaat 31147891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 44295448 - 44295500
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  44295448 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 44295500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 31713058 - 31712988
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttttggttcagattttcat 239  Q
    ||||||||||| |||||||||||||| | ||||||| |||||| | ||||||| || |||||||||| ||||    
T  31713058 ttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttg-ttcggttcagattgtcat 31712988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 7269585 - 7269543
Alignment:
Q  56 ggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||    
T  7269585 ggtgatttagagtcaatttttgaccctaaatcacccttctaac 7269543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 15827109 - 15827139
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||    
T  15827109 gtgatttcgtcgtcttagtgcgacgttgttt 15827139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 31147818 - 31147759
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||||||||||||||||| |||| || ||||  ||||||| |||| |||||||||    
T  31147818 ttgtgatttcgtcgtcttagtgcgaggttggttctttt--ttgtttcattcaggtatttgtt 31147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 32412926 - 32412987
Alignment:
Q  172 tcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttttggttcagatt 234  Q
    ||||||| |||||| ||||||| ||||||||||||| |||| |||||||  ||||||||||||    
T  32412926 tcgtctttgtgcgatgttgtttgtttttcttgtttctttcaggtatttg-attggttcagatt 32412987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 32920632 - 32920686
Alignment:
Q  43 tccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||||||||||||||| ||||| |||||| |||| ||| |||||||| ||||||    
T  32920632 tccaccaaagaggggtggtttagggtcaatctttgcccctaaatcaccgctctaa 32920686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 37659098 - 37659152
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| || |||||||||||   |||||||||||||||| |||||||||    
T  37659098 ttcgtcgtctttgtacgacgttgtttgcctttcttgtttcgttcaagtatttgtt 37659152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 37719950 - 37719980
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||    
T  37719950 gtgatttcgtcgtcttagtgcgacgttgttt 37719980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 5917903 - 5917821
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctcta 96  Q
    |||||||||||| ||||| | ||  ||||| || |  ||||||||||||||| | ||||||||  ||||||||||||||||||||    
T  5917903 cgtcaccaaaactctagtatatttcccttcatctaataaagaggggtgattttgagtcaattt--gacccaaaatcacccctcta 5917821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 5989596 - 5989665
Alignment:
Q  29 tttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||| ||||| ||||| ||| | | ||||||||| |||||||||| ||||||||||||  |||||||    
T  5989596 tttcttctccttcctccactaaataagagtgatttagggtcaatttttaacccaaaatcacatctctaac 5989665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7281303 - 7281206
Alignment:
Q  1 ttcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||| ||| |||||||||||| ||||||||||| || || || | |||  || |||| ||||| |||| ||||| |||| ||||||||| ||||||    
T  7281303 ttcttgtgagccgtcaccaaaactctagtttcttctccctcatctatcaagtagaggtgttttagagtcagtttttaaccctaaatcacccatctaac 7281206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 14531037 - 14530988
Alignment:
Q  48 caaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    |||||||||||| ||||| ||||||||||||| | ||||||||| |||||    
T  14531037 caaagaggggtggtttagggtcaatttttgactccaaatcacccttctaa 14530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 1215356 - 1215324
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||| ||||||||||    
T  1215356 ttgtgatttcgtcgtcttagtgtgacgttgttt 1215324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 5457203 - 5457255
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| | |||||||||||  ||| |||||||    
T  5457203 ttcgtcgtcttcgtgcgacgttgtttgtctttcttgtttctctcaagtatttg 5457255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 5917757 - 5917729
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  5917757 gtgatttcgtcgtcttagtgcgacgttgt 5917729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 8054789 - 8054737
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| | |||||||||||  ||| |||||||    
T  8054789 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 8054737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 12248731 - 12248699
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||| ||||||    
T  12248731 ttgtgatttcgtcgtcttagtgcgaccttgttt 12248699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 14327576 - 14327608
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    ||||||||| |||||||||||||||||||||||    
T  14327576 ttgtgatttagtcgtcttagtgcgacgttgttt 14327608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 16937356 - 16937324
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||| ||||||    
T  16937356 ttgtgatttcgtcgtcttagtgcgaccttgttt 16937324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 16996871 - 16996819
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||| ||||||  ||| |||||||    
T  16996871 ttcgtcgtctttgtgcgacgttgtttgtttttcctgtttctctcaggtatttg 16996819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 18890832 - 18890804
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  18890832 gtgatttcgtcgtcttagtgcgacgttgt 18890804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 27534532 - 27534480
Alignment:
Q  44 ccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctcta 96  Q
    |||| ||||||||||||||||| |||||||||||| || |||||  |||||||    
T  27534532 ccacgaaagaggggtgatttagggtcaatttttgatcccaaatcgtccctcta 27534480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 31874216 - 31874268
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| ||||||| |||||| |||||||||||||  ||| |||||||    
T  31874216 ttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttg 31874268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 32061891 - 32061923
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    ||||||||||||||||||||||||||| |||||    
T  32061891 ttgtgatttcgtcgtcttagtgcgacgctgttt 32061923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 37129657 - 37129605
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| ||||||| |||||| |||||||||||||  ||| |||||||    
T  37129657 ttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttg 37129605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 37129817 - 37129761
Alignment:
Q  18 caaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaattt 74  Q
    |||||||||||||| ||| ||||| |||||||| |||| ||||||| | ||||||||    
T  37129817 caaaaccctagtttattctccttcatccaccaaggaggtgtgattttgggtcaattt 37129761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 39657410 - 39657438
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  39657410 gtgatttcgtcgtcttagtgcgacgttgt 39657438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 22345077 - 22344991
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  22345077 cgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttaggttcaatttttgacccaaaatcacccctctaac 22344991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 44514155 - 44514077
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacc 90  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  44514155 cgtcaccaaaaccctaatttcttcaccttcatccactaaagaggggtgatttagggtcaatttttgacccaaaatcacc 44514077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 6213042 - 6212965
Alignment:
Q  21 aaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||||||||| ||||||||    
T  6213042 aaccctagtttcttctccttcgtccatcaaagaggggtgatttatggtcaatttttgacccaaaatcacacctctaac 6212965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 30853946 - 30853868
Alignment:
Q  14 tcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccc 92  Q
    |||||||||||||||||||||| ||||| ||||||||||||| |||||| |  ||||||||||||||||||||||||||    
T  30853946 tcaccaaaaccctagtttcttctccttcatccaccaaagaggtgtgattcaaggtcaatttttgacccaaaatcacccc 30853868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 14717417 - 14717340
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgac 79  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  14717417 tcttgtgagccgtcaccaaaactctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgac 14717340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 52839364 - 52839458
Alignment:
Q  4 ttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||| ||| ||||||| ||||||| ||| | ||| ||||  ||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  52839364 ttgagagttgtcgccaaaactctagtttgttctctttcatccattaaagaggggtgatttagggtcaatttttgacccaaaatcacccttctaac 52839458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 32539172 - 32539106
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttttggttcagatt 234  Q
    ||||||||||| |||||||||||||| ||||| |||||| || ||||||||||||||||||||||||    
T  32539172 ttcgtcgtctttgtgcgacgttgtttgtttttattgttttgtccatgtatttgttttggttcagatt 32539106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 26199712 - 26199766
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  26199712 ttcgtcgtctttgtgcgacgttgtttatctttcttgtttcgttcaggtatttgtt 26199766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 5832220 - 5832268
Alignment:
Q  50 aagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  5832220 aagaggggtgatttagggtcaatttttgaccctaaatcacccctctaac 5832268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 22032229 - 22032169
Alignment:
Q  38 cttcgtccaccaaagaggggtgatttagcgtcaatttttgaccc-aaaatcacccctctaa 97  Q
    |||| |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  22032229 cttcatccaccaaagagggatgatttagggtcaatttttgacccaaaaatcacccctctaa 22032169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 44562871 - 44562828
Alignment:
Q  55 gggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  44562871 gggtgatttagggtcaatttttgacccaaaatcacccctctaac 44562828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 13691916 - 13691838
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagagggg-tgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||| || |||||||  |||| ||||| ||||||||| || ||||| |||||||||||||||||||||||||||||||    
T  13691916 aaaccttaatttcttcttcttcatccactaaagagggggtggtttagggtcaatttttgacccaaaatcacccctctaa 13691838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 14717259 - 14717213
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  14717259 ttgtgatttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 14717213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 26199536 - 26199630
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaat----ttttgacccaaaatcacccct 93  Q
    ||||| |||||||||| |||| | |||||||||| ||||| ||||||||||||||||||  ||| ||||||    |||||||||||||||||||||    
T  26199536 tcttgtgagtcgtcactaaaatcttagtttcttctccttcatccaccaaagaggggtga-atagggtcaatttaattttgacccaaaatcacccct 26199630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 33703671 - 33703594
Alignment:
Q  14 tcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccc 92  Q
    ||||||||||| |||||| ||| ||||| ||||| |||||||| |||||||  |||||||||| |||||||||||||||    
T  33703671 tcaccaaaacc-tagttttttctccttcatccactaaagagggatgatttatggtcaattttttacccaaaatcacccc 33703594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 48655199 - 48655154
Alignment:
Q  44 ccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcac 89  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  48655199 ccaccaaaaaggggtgatttagagtcaatttttgacccaaaatcac 48655154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 33703489 - 33703437
Alignment:
Q  171 gtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttt 223  Q
    |||||||| |||||||||||||| | |||||||||||||||| ||||||||||    
T  33703489 gtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcacgtatttgttt 33703437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 37685270 - 37685175
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||| |||| |||||||||||  ||||| |||||||||||||   |||| || ||||||||||||||||||||||  ||||||||    
T  37685270 tcttgtgagccgtcacaaaaatcctagtttcttt-ccttcatccaccaaagaggaacgattgagagtcaatttttgacccaaaatcaatcctctaac 37685175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 37700248 - 37700343
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||| |||| |||||||||||  ||||| |||||||||||||   |||| || ||||||||||||||||||||||  ||||||||    
T  37700248 tcttgtgagccgtcacaaaaatcctagtttcttt-ccttcatccaccaaagaggaacgattgagagtcaatttttgacccaaaatcaatcctctaac 37700343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27469908 - 27469821
Alignment:
Q  1 ttcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatca 88  Q
    |||||| ||| |||||||||||  |||||||||||  |||| ||||  ||||||||||||||||  ||||||||| || |||||||||    
T  27469908 ttcttgtgagccgtcaccaaaattctagtttcttcttcttcatccattaaagaggggtgatttaaggtcaattttcgaaccaaaatca 27469821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 38646716 - 38646767
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtattt 219  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||||||||||    
T  38646716 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtattt 38646767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 52839501 - 52839556
Alignment:
Q  43 tccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||| |||||||||||||||||   |||||||||||||||||||||||| ||||||    
T  52839501 tccatcaaagaggggtgatttatgatcaatttttgacccaaaatcacccttctaac 52839556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 10264841 - 10264895
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||| ||||||||| |||||||| ||||||||| |||||||||    
T  10264841 ttcgtcgtctttgtgcaacgttgtttgtttttcttttttcgttcaggtatttgtt 10264895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 10877303 - 10877381
Alignment:
Q  21 aaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaa-tttttgacccaaaatcacccctctaac 98  Q
    |||| |||||||||| | || ||||||||||||| |||||||||  ||||| ||||| |||||||||||| ||||||||    
T  10877303 aaccttagtttcttctcttttgtccaccaaagagtggtgatttatggtcaatttttttacccaaaatcacacctctaac 10877381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 12148181 - 12148127
Alignment:
Q  44 ccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||| ||||||||||||||| ||||||||||||||  ||| |||||||    
T  12148181 ccaccaaagagcggtgatttagcgtcagtttttgacccaaaaataccactctaac 12148127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 17579753 - 17579803
Alignment:
Q  48 caaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||| |||| |||||||||||| ||||||||| |||||||||    
T  17579753 caaagaggggtgacttagggtcaatttttgaaccaaaatcatccctctaac 17579803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 38646538 - 38646612
Alignment:
Q  17 ccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcaccc 91  Q
    ||||||| ||| ||| ||| ||||| || | |||||||| ||||||||  |||||||||||||||||||||||||    
T  38646538 ccaaaactctaattttttctccttcatctatcaaagaggagtgatttatggtcaatttttgacccaaaatcaccc 38646612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 45659139 - 45659185
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    
T  45659139 ttgtgatttcgtcgtctttgtgcgacgttggttgtttttcttgtttc 45659185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 630909 - 630864
Alignment:
Q  53 aggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  630909 aggggtgatttagggtcaatttttgaccctaaatcacccatctaac 630864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 46589112 - 46589204
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagttt-cttcaccttcgtcc--accaaagaggggtgatttagcgtcaatttttgacccaaaatcaccc 91  Q
    ||||| ||| ||||||||||| |||| ||| |||| ||||| |||  |||||||||||||||||||   |||||||||||| |||||||||||    
T  46589112 tcttgtgagccgtcaccaaaaacctaattttcttctccttcatccccaccaaagaggggtgatttatgatcaatttttgactcaaaatcaccc 46589204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 22344894 - 22344842
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  22344894 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 22344842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 23257056 - 23257104
Alignment:
Q  13 gtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgat 61  Q
    ||||||||||||||||||||||| ||||| ||  |||||||||||||||    
T  23257056 gtcaccaaaaccctagtttcttctccttcatctgccaaagaggggtgat 23257104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 23257220 - 23257272
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  23257220 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 23257272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 27469725 - 27469693
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||||    
T  27469725 ttgtgatttcgtcgtcttagtgcgacgttgttt 27469693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 40488414 - 40488382
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||||    
T  40488414 ttgtgatttcgtcgtcttagtgcgacgttgttt 40488382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 6212899 - 6212844
Alignment:
Q  165 gatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    |||||||||||||| ||||||| |||||| |||||||||||||  ||| |||||||    
T  6212899 gatttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttg 6212844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 40992433 - 40992492
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||||| |||| |||||||||||||| | |||||||||||  ||| |||||||    
T  40992433 ttgtgatttcgtcatcttcgtgcgacgttgtttgtgtttcttgtttctctcaggtatttg 40992492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 46589274 - 46589333
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    |||||||||||||||| ||||| || ||||| | |||||||||||| ||| |||||||||    
T  46589274 gtgatttcgtcgtctttgtgcggcggtgtttgtctttcttgtttcgctcaagtatttgtt 46589333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 48655023 - 48654968
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttt 223  Q
    ||||||||||| || | ||||||||| | ||| |||||||||||||||||||||||    
T  48655023 ttcgtcgtctttgtacaacgttgtttgtctttattgtttcgttcatgtatttgttt 48654968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 11121108 - 11121162
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    |||||| |||| |||| ||||||||| | |||||||||| |||||||||||||||    
T  11121108 ttcgtcatctttgtgcaacgttgtttgtctttcttgttttgttcatgtatttgtt 11121162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 18889032 - 18889097
Alignment:
Q  29 tttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctct 95  Q
    ||||||| ||||  || |||||||||||||||||||| ||||| ||||| || ||||||||||||||    
T  18889032 tttcttctcctttatctaccaaagaggggtgatttagagtcaa-ttttggccgaaaatcacccctct 18889097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 21326462 - 21326508
Alignment:
Q  52 gaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||||  ||||||||||| | |||||||||||||||||    
T  21326462 gaggggtgatttaggatcaatttttgaacaaaaatcacccctctaac 21326508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 27469686 - 27469636
Alignment:
Q  172 tcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||| |||||||||||||| | |||||||||||||||| ||| |||||    
T  27469686 tcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtaattgtt 27469636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 28213180 - 28213234
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| ||||||| |||||| | ||||||||||| |||| |||||||||    
T  28213180 ttcgtcgtctttgtgcgacattgtttgtctttcttgtttctttcaggtatttgtt 28213234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 44513972 - 44513930
Alignment:
Q  180 gtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    |||||||||||||| | |||||||||||||||| |||||||||    
T  44513972 gtgcgacgttgtttgtctttcttgtttcgttcaggtatttgtt 44513930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 45658671 - 45658717
Alignment:
Q  19 aaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttag 65  Q
    ||||||||||||||||| | ||| |||| ||||||||||||||||||    
T  45658671 aaaaccctagtttcttctctttcatccatcaaagaggggtgatttag 45658717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 52839662 - 52839716
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    |||||| |||| ||| |||||||||| | |||||||||||||||| |||||||||    
T  52839662 ttcgtcatctttgtgagacgttgtttgtctttcttgtttcgttcaggtatttgtt 52839716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 2350719 - 2350751
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    ||||||||| |||||||||||||||||||||||    
T  2350719 ttgtgatttagtcgtcttagtgcgacgttgttt 2350751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 9189215 - 9189275
Alignment:
Q  37 ccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||| |||| |||||||||||||||||  || ||||||| |||| ||||||| |||||||    
T  9189215 ccttcatccatcaaagaggggtgatttattgtaaattttttaccctaaatcacacctctaa 9189275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 16161795 - 16161823
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  16161795 gtgatttcgtcgtcttagtgcgacgttgt 16161823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 23320572 - 23320624
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||| ||| | |||||||||||  |||||||||||    
T  23320572 ttcgtcgtctttgtgcgacgttatttgtctttcttgtttctctcatgtatttg 23320624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 38644779 - 38644727
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| ||||||| |||||| |||||||||||||  ||| |||||||    
T  38644779 ttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttg 38644727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 40775206 - 40775302
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| |||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  40775206 tcttgtgagtcgtcaccaaaaccctaatttcttctccttcatccatcaaagaggggtgatttagggtcaatttttgatccaaaatcacccctataac 40775302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 24470352 - 24470430
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  24470352 aaaccctagtttcttctccttcatccaccaaagaggggtgatttaggggcaatttttgacccaaaatcacccctctaac 24470430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 24475300 - 24475378
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  24475300 aaaccctagtttcttctccttcatccaccaaagaggggtgatttaggggcaatttttgacccaaaatcacccctctaac 24475378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 28015295 - 28015391
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| || ||||||||||||| ||| ||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  28015295 tcttgggagccgccaccaaaaccctaattttttcaccttcatccactaaagaggggtgatttagggtcaatttttgatccaaaatcacccctctaac 28015391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 47749683 - 47749767
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctcta 96  Q
    |||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  47749683 cgtcacgaaaaccctaatttcttctccttcatccaccaaagaggggtgatttatggtcaatttttgacccaaaatcacccctcta 47749767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 5025222 - 5025135
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaa-tttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  5025222 cgtcaccaaaaccctagtttcttcatcttcatccaccagagaggggtgattttgagtcaattttttgacccaaaatcacccctctaac 5025135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 38649524 - 38649438
Alignment:
Q  11 tcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    |||||||||||| |||| ||||||||||||| || || ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  38649524 tcgtcaccaaaatcctaatttcttcaccttcatcaactaaaaaggggtgatttagagtcaatttttgacccaaaatcacccctctaa 38649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 49166884 - 49166962
Alignment:
Q  20 aaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  49166884 aaaccctagtttcttctccttcatccaccaaagatgggtgatttagggtcaatttttgacctaaaatcacccctctaac 49166962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 8611791 - 8611701
Alignment:
Q  8 gagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||  |||||||||||||||| ||||| ||||| ||||||||||||||||| |||  |||||||||||| ||||||||||||||    
T  8611791 gagtcgtcacacaaaccctagtttcttctccttcatccacgaaagaggggtgatttagggtctctttttgacccaatatcacccctctaac 8611701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 35141928 - 35141832
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||||||||| | |||||| ||| ||||| | ||||||||| ||||||||||| |||||||||||||| |||||||||| ||||||    
T  35141928 tcttgtgagccgtcaccaaaatcatagtttattctccttcattcaccaaagaagggtgatttagggtcaatttttgaccaaaaatcacccttctaac 35141832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 23732568 - 23732472
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||||||||||||  |||||||| |||| | || |||||||||||||||||  ||||||||||||| |||||||||  |||||||    
T  23732568 tcttgtgagccgtcaccaaaaccctcatttcttcaacttcattcatcaaagaggggtgatttaaggtcaatttttgactcaaaatcacttctctaac 23732472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 29804810 - 29804756
Alignment:
Q  43 tccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  29804810 tccaccaaagaggggtggtttagggtcaatttttgaccccaaatcacccctctaa 29804756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 39090213 - 39090290
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttttggttcagattttcat 239  Q
    ||||||||||||| |||| |||||||||||||| | |||||||||||||||| ||||||| || |||||||||| ||||    
T  39090213 ttgtgatttcgtcatctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttg-ttcggttcagattgtcat 39090290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 25855388 - 25855299
Alignment:
Q  13 gtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtg----atttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||| ||||| |||||| ||| ||||| |||||||||||||||||    |||||| |||||||||||| ||||||||| |||||||||    
T  25855388 gtcaccgaaaccttagttttttctccttcatccaccaaagaggggtgggtgatttagggtcaatttttgatccaaaatcatccctctaac 25855299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 8319268 - 8319342
Alignment:
Q  18 caaaaccctagttt-cttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcaccc 91  Q
    |||||||||||||| |||| ||||  ||||||||||||| ||||||||  ||||| |||||||||||||||||||    
T  8319268 caaaaccctagttttcttctcctttatccaccaaagaggagtgatttatggtcaacttttgacccaaaatcaccc 8319342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 21329429 - 21329376
Alignment:
Q  43 tccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  21329429 tccaccaaagaggggtggtttagggtcaatttttgaccc-aaatcacccctctaa 21329376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 35135347 - 35135273
Alignment:
Q  13 gtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatc 87  Q
    |||||||||||||||| || ||| ||||| |||| | |||||| ||||||||| |||||||||||||| ||||||    
T  35135347 gtcaccaaaaccctagattattctccttcatccatctaagaggagtgatttagagtcaatttttgacctaaaatc 35135273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 33530629 - 33530547
Alignment:
Q  14 tcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||| |||||||||   |||| || | |||||||||||||||||| |||||  |||||||||||| ||||||||||||    
T  33530629 tcaccaaaaccatagtttcttttacttcatctatcaaagaggggtgatttagggtcaa--tttgacccaaaaccacccctctaac 33530547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 14734189 - 14734130
Alignment:
Q  38 cttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    |||| |||| |||||| ||||| ||||| ||||||||||||||| |||||||||||||||    
T  14734189 cttcatccatcaaagaagggtggtttagggtcaatttttgaccccaaatcacccctctaa 14734130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 24045366 - 24045311
Alignment:
Q  43 tccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||| ||||||| |||||||||  ||||||||||||||||||||||||| ||||||    
T  24045366 tccatcaaagagtggtgatttaaggtcaatttttgacccaaaatcacccgtctaac 24045311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 37399727 - 37399782
Alignment:
Q  165 gatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    |||||||||||||| |||||||||||||| | ||||||||||| |||| |||||||    
T  37399727 gatttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctttcaagtatttg 37399782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 16263372 - 16263422
Alignment:
Q  48 caaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  16263372 caaagaggggtgatttaggatcaatttttgatccaaaatcacctctctaac 16263422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 28015489 - 28015543
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| ||||||||||||||   |||||||||||||||| |||||||||    
T  28015489 ttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgtt 28015543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 30992948 - 30992902
Alignment:
Q  52 gaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||  || |||||||||||||||||||||||||||||    
T  30992948 gaggggtgatttaaggttaatttttgacccaaaatcacccctctaac 30992902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 29805021 - 29804976
Alignment:
Q  44 ccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcac 89  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||||    
T  29805021 ccaccaaagaggggtggtttagggtcaatttttgaccccaaatcac 29804976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 41748666 - 41748581
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    |||||| | ||| |||||||||||| |||| | ||| ||||||  ||||||||  |||||||||||| |||||||||| |||||||    
T  41748666 cgtcacgagaactctagtttcttcatcttcattcactaaagagatgtgatttacggtcaatttttgatccaaaatcactcctctaa 41748581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 14734066 - 14734034
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||||    
T  14734066 ttgtgatttcgtcgtcttagtgcgacgttgttt 14734034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 24470525 - 24470577
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  24470525 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 24470577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 24475473 - 24475525
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  24475473 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 24475525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 35661472 - 35661532
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatt 62  Q
    ||||| ||| ||||||||| | |||||||||||| ||||| |||| |||||||||||||||    
T  35661472 tcttgtgagccgtcaccaatatcctagtttcttctccttcatccatcaaagaggggtgatt 35661532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 40476839 - 40476891
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  40476839 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 40476891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 40775399 - 40775451
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  40775399 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 40775451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 47749866 - 47749918
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  47749866 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 47749918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 13008655 - 13008585
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttttggttcagattttcat 239  Q
    ||||||||||| ||||| |||||||| | |||||| ||||||||| ||||||| || |||||||||| ||||    
T  13008655 ttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgttcaggtatttg-ttcggttcagattgtcat 13008585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 23177747 - 23177660
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaa-tttttgacccaaaatcacccctctaac 98  Q
    |||||| ||||| ||||||||||| ||||| ||||  ||||| | ||||||||  ||||| ||||| |||||||||||| ||||||||    
T  23177747 cgtcacaaaaactctagtttcttctccttcatccattaaagatgagtgatttaaggtcaatttttttacccaaaatcactcctctaac 23177660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 36350295 - 36350354
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    |||||||||||||||||||| |||||||||| | ||| |||||| |||||  ||||||||    
T  36350295 gtgatttcgtcgtcttagtgtgacgttgtttgtcttttttgtttggttcagatatttgtt 36350354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 41748514 - 41748471
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgtttatttttcttgttt 206  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||    
T  41748514 gtgatttcgccgtcttagtgcgacgttgtttgtctttcttgttt 41748471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 49167057 - 49167096
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  49167057 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 49167096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 772542 - 772572
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||    
T  772542 gtgatttcgtcgtcttagtgcgacgttgttt 772572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 5237924 - 5237977
Alignment:
Q  43 tccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||||||||||||||||||||| |||||  |||||| ||||||||||| |||||    
T  5237924 tccaccaaagaggggtgatttagggtcaa-atttgactcaaaatcacccttctaa 5237977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 21552470 - 21552440
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||    
T  21552470 gtgatttcgtcgtcttagtgcgacgttgttt 21552440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 37399555 - 37399629
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaattttt 76  Q
    ||||| ||| ||||||  |||||||| |||||||  |||| ||||||||||| ||||||||||| || |||||||    
T  37399555 tcttgtgagccgtcacgcaaaccctaatttcttcttcttcatccaccaaagacgggtgatttagggttaattttt 37399629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 43807271 - 43807229
Alignment:
Q  56 ggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||  |||||||||||||||||||||||| |||||||    
T  43807271 ggtgatttatggtcaatttttgacccaaaatcacctctctaac 43807229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 34595808 - 34595731
Alignment:
Q  19 aaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctcta 96  Q
    ||||||||| ||||||   |||| ||||||||||||| ||| ||||| ||||||||| ||| | |||||||| |||||    
T  34595808 aaaaccctaatttctttttcttcatccaccaaagaggagtggtttagggtcaattttcgactctaaatcaccactcta 34595731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 43483557 - 43483629
Alignment:
Q  25 ctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||| || |||| ||||| || |||| ||||||||| |||||||||||| | ||||||| |||||||||    
T  43483557 ctagtttctgcatcttcatccactaa-gaggagtgatttagggtcaatttttgatctaaaatcatccctctaac 43483629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 1749282 - 1749254
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  1749282 gtgatttcgtcgtcttagtgcgacgttgt 1749254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 5025073 - 5025041
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||| ||||||    
T  5025073 ttgtgatttcgtcgtcttagtgcgaccttgttt 5025041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 7986024 - 7986076
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| ||| |||||||||| |||||||||||||  ||| |||||||    
T  7986024 ttcgtcgtctttgtgtgacgttgtttgtttttcttgtttctctcaggtatttg 7986076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 8611603 - 8611567
Alignment:
Q  171 gtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    |||||||| |||||||||||||| |||||||||||||    
T  8611603 gtcgtctttgtgcgacgttgtttgtttttcttgtttc 8611567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 9933944 - 9933976
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    ||||||||||| |||||||||||||||||||||    
T  9933944 ttgtgatttcgccgtcttagtgcgacgttgttt 9933976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 11001975 - 11002027
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||| ||||||||| |||||||||||||  ||| |||||||    
T  11001975 ttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttg 11002027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 23177566 - 23177510
Alignment:
Q  167 tttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttt 223  Q
    |||||||||||| ||||| |||||| | | |||||||||| ||||| ||||||||||    
T  23177566 tttcgtcgtctttgtgcggcgttgtctgtctttcttgttttgttcaggtatttgttt 23177510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 24350972 - 24350944
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  24350972 gtgatttcgtcgtcttagtgcgacgttgt 24350944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 26017640 - 26017588
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| | |||||||||||  ||| |||||||    
T  26017640 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 26017588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 28476183 - 28476211
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  28476183 gtgatttcgtcgtcttagtgcgacgttgt 28476211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 35132903 - 35132931
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  35132903 gtgatttcgtcgtcttagtgcgacgttgt 35132931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 37890453 - 37890417
Alignment:
Q  186 cgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    |||||||| |||||||||||||||||| |||||||||    
T  37890453 cgttgtttgtttttcttgtttcgttcacgtatttgtt 37890417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 43483697 - 43483729
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    ||||||||||| |||||||||||||||||||||    
T  43483697 ttgtgatttcgccgtcttagtgcgacgttgttt 43483729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 33486745 - 33486649
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||||||||||| || ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  33486745 tcttgggagccgtcaccaaaaccttaatttcttcaccttcatccactaaagaggggtgatttagggtcaatttttgacccaaaatcacccatctaac 33486649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 6887343 - 6887257
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||| ||||||||||| ||||| |||| |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  6887343 cgtcaccaaaactctagtttcttctccttcatccatcaaagaggggtgatttagggtcaatttttaacccaaaatcacccctctaac 6887257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 18472897 - 18472804
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||||||||| ||||||||||||||||| |||||||||||||   ||||||| ||||||||||||||||||||||||||||||||    
T  18472897 tcttgggagccgtcaccaaaactctagtttcttcaccttcatccaccaaagagg---gatttagggtcaatttttgacccaaaatcacccctctaac 18472804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 31645778 - 31645864
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  31645778 cgtcaccaaaaccctagtttcttctccttcatccattaaagaggggtgatttagggtcaatttttgatccaaaatcacccctctaac 31645864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 34894075 - 34893995
Alignment:
Q  18 caaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  34894075 caaaaccctagtttcttctccttcatccatcaaagaggggtgatttacggtcaatttttgacccaaaatcacccctctaac 34893995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 41554436 - 41554521
Alignment:
Q  13 gtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||| |||| ||||||||||||| | || ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  41554436 gtcaccaaaatcctaatttcttcaccttcattcatcaaagaggggtgatttaggatcaatttttgatccaaaatcacccctctaac 41554521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 8812315 - 8812231
Alignment:
Q  14 tcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||| ||||| |||||||||||| |||| ||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||    
T  8812315 tcacaaaaactctagtttcttcatcttcatccaccaaaaaggggtgatatagggtcaatttttaacccaaaatcacccctctaac 8812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 37424941 - 37425028
Alignment:
Q  12 cgtcaccaaaaccctagttt-cttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||||||| |||  ||||| ||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||    
T  37424941 cgtcaccaaaaccctagttttcttttccttcatccaccaaagaggggtgatttatggtcaatttctgacccaaaatcacgcctctaac 37425028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 28618564 - 28618639
Alignment:
Q  23 ccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||| ||||| ||  ||||||||||||||||||  |||||||||| |||||||||||||||||||||    
T  28618564 ccctagtttcttctccttcatcagccaaagaggggtgatttaaggtcaatttttaacccaaaatcacccctctaac 28618639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 2415339 - 2415435
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| ||||| ||||||||||||||  |  ||||| |||| ||||||  |||||||||| ||||||||||||||||||||||||| ||||||    
T  2415339 tcttgtgagccgtcatcaaaaccctagtttaatttccttcatccatcaaagataggtgatttagggtcaatttttgacccaaaatcacccttctaac 2415435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 4070512 - 4070586
Alignment:
Q  19 aaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctct 95  Q
    ||||| ||||||||||| | ||| ||||||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  4070512 aaaactctagtttcttctc-ttcatccaccaaaaaggggtgatttagggtca-tttttgacccaaaatcacccctct 4070586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 9035115 - 9035027
Alignment:
Q  10 gtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| ||||||| |||||||||||| ||||| || | ||| |||||||||||||   |||||||||||| |||||||| |||||||||    
T  9035115 gtcgttaccaaaatcctagtttcttctccttcatctatcaatgaggggtgatttatgatcaatttttgactcaaaatcatccctctaac 9035027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 19646188 - 19646120
Alignment:
Q  30 ttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||| ||||| || |||||||||||||| ||||  |||||| |||||||||||||||||||||||||    
T  19646188 ttcttctccttcatcgaccaaagaggggtggtttaaggtcaatgtttgacccaaaatcacccctctaac 19646120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 29310476 - 29310428
Alignment:
Q  50 aagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||    
T  29310476 aagaggggtgatttagggtcaatttttgatccaaaatcacccctctaac 29310428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 6648071 - 6647992
Alignment:
Q  19 aaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||| ||  ||||| |||| |||||||||| ||||||  ||||| ||||||||||||||||| ||||||||    
T  6648071 aaaaccctagtttattttccttcatccatcaaagaggggcgatttatggtcaaattttgacccaaaatcactcctctaac 6647992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 33486551 - 33486497
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| |||||||||||||| | |||||||||||||||| |||||||||    
T  33486551 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaagtatttgtt 33486497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 34950414 - 34950511
Alignment:
Q  2 tcttgagagtcgtcacc-aaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatca-cccctctaa 97  Q
    |||||||||| |||||| ||||||||| ||| ||| | ||| |||||||||||| |||| ||||  ||||||| |||||||||||||| |||||||||    
T  34950414 tcttgagagttgtcacctaaaaccctacttttttctcattcatccaccaaagagaggtggtttatggtcaattcttgacccaaaatcatcccctctaa 34950511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 41357990 - 41358067
Alignment:
Q  15 caccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccc 92  Q
    ||||||||| ||||||||||  ||||| |  | ||||||  |||||||||| ||||||||||||||||||||||||||    
T  41357990 caccaaaactctagtttcttttccttcatagatcaaagataggtgatttagggtcaatttttgacccaaaatcacccc 41358067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 41988138 - 41988219
Alignment:
Q  17 ccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||| ||||||||||| |||||  | | ||||||||||||||||||  |||||||||||  ||||||| ||||||||||    
T  41988138 ccaaaactctagtttcttctccttcacctatcaaagaggggtgatttaggatcaatttttgattcaaaatcgcccctctaac 41988219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 35906394 - 35906453
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  35906394 ttgtaatttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 35906453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 193
Target Start/End: Original strand, 20270809 - 20270843
Alignment:
Q  159 tgttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||||||    
T  20270809 tgttgtgatttcgtcgtcttagtgcgacgttgttt 20270843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 20270846 - 20270900
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| ||||||||||||||   |||||||||||||||| |||||||||    
T  20270846 ttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgtt 20270900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 34893933 - 34893887
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttc 207  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||    
T  34893933 ttgtgattttgtcgtctttgtgcgacgttgtttgtttttcttgtttc 34893887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 4070683 - 4070735
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  4070683 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 4070735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 22397565 - 22397533
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||||||||||    
T  22397565 ttgtgatttcgtcgtcttagtgcgacgttgttt 22397533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 29310336 - 29310284
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  29310336 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 29310284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 15710495 - 15710577
Alignment:
Q  18 caaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttg--acccaaaatcacccctctaac 98  Q
    |||||| ||||||||||  ||||| |||| |||||| ||||||||||  ||||||||||   | |||||||||||||||||||    
T  15710495 caaaactctagtttcttttccttcatccatcaaagatgggtgatttatggtcaattttttttatccaaaatcacccctctaac 15710577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 18472704 - 18472654
Alignment:
Q  172 tcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||| |||||||||||||| | ||||||||||| |||| |||||||||    
T  18472704 tcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgtt 18472654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 22397530 - 22397476
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||||| ||||||| |||||| | |||||| ||||||||| |||||||||    
T  22397530 ttcgtcgtctttgtgcgacattgtttgtctttcttatttcgttcaggtatttgtt 22397476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 28500814 - 28500891
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgttttggttcagattttcat 239  Q
    |||||||||| ||||||||||||| | |||||| | |||||| ||||||||  ||||||| || |||||||||| ||||    
T  28500814 ttgtgatttcttcgtcttagtgcggcattgtttgtctttcttatttcgttcgggtatttg-ttcggttcagattgtcat 28500891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 34843862 - 34843951
Alignment:
Q  12 cgtcaccaaaaccctagttt-cttcaccttcgtccaccaaagaggggtgatttagcgtcaa--tttttgacccaaaatcacccctctaac 98  Q
    ||||||||||||| |||||| |||| ||||| || ||||||||||| |||||||  |||||  ||||| | ||||||||||| |||||||    
T  34843862 cgtcaccaaaaccttagttttcttctccttcatcgaccaaagagggatgatttatagtcaattttttttatccaaaatcacctctctaac 34843951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 40565289 - 40565235
Alignment:
Q  43 tccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaa 97  Q
    ||||||||||||||||| ||||| ||  ||||||||||| |||||||| ||||||    
T  40565289 tccaccaaagaggggtggtttagggttgatttttgaccccaaatcacctctctaa 40565235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 41063559 - 41063475
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||||||||| |||| ||||||| ||||| |||| |||||| |||||| | || ||||||||||||| ||||||||| | ||||||    
T  41063559 cgtcaccaaaatcctaatttcttctccttcatccatcaaaga-gggtga-tcagggtcaatttttgactcaaaatcactcatctaac 41063475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 41554619 - 41554673
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttgtt 222  Q
    ||||||||| | |||||||||||||| | |||||||||||| ||| |||||||||    
T  41554619 ttcgtcgtccttgtgcgacgttgtttgtctttcttgtttcgctcaggtatttgtt 41554673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 8957177 - 8957234
Alignment:
Q  29 tttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaat 86  Q
    |||||||| |||| ||||||||||||||||| ||||| ||||||| | ||||| ||||    
T  8957177 tttcttcatcttcatccaccaaagaggggtggtttagggtcaattgtggaccccaaat 8957234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 28423963 - 28423887
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcac 89  Q
    ||||| |||||| ||| ||||||||||||| ||||  ||| ||||||  ||||| ||||| |||||||||||||||||    
T  28423963 cgtcatcaaaactctattttcttcaccttcatccattaaataggggtagtttagagtcaa-ttttgacccaaaatcac 28423887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 2979441 - 2979413
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  2979441 gtgatttcgtcgtcttagtgcgacgttgt 2979413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 4726910 - 4726858
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| | |||||||||||  ||| |||||||    
T  4726910 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 4726858  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 4727053 - 4727017
Alignment:
Q  52 gaggggtgatttagcgtcaatttttgacccaaaatca 88  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  4727053 gaggggtaatttagggtcaatttttgacccaaaatca 4727017  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 6887160 - 6887108
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| ||||||||| |||  ||| |||||||    
T  6887160 ttcgtcgtctttgtgcgacgttgtttgtttttcttgcttctctcaggtatttg 6887108  T

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Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 15710328 - 15710296
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    ||||||||| |||||||||||||||||||||||    
T  15710328 ttgtgattttgtcgtcttagtgcgacgttgttt 15710296  T

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Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 19103602 - 19103574
Alignment:
Q  163 gtgatttcgtcgtcttagtgcgacgttgt 191  Q
    |||||||||||||||||||||||||||||    
T  19103602 gtgatttcgtcgtcttagtgcgacgttgt 19103574  T

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Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 31645961 - 31646013
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||| ||||||||  ||| |||||||    
T  31645961 ttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttg 31646013  T

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Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 33486586 - 33486554
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    |||||||||||||||||||||||||| ||||||    
T  33486586 ttgtgatttcgtcgtcttagtgcgaccttgttt 33486554  T

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Target: scaffold0045 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 9813 - 9727
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  9813 cgtcacaaaaaccctagtttcttctccttcatccaccaaagagggatgatttagggtcaatttttgacccaaaatcactcctctaac 9727  T

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Target: scaffold0011 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 10963 - 11054
Alignment:
Q  7 agagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||| |||||||||||||||||||||||| |  || | ||||||||| ||||||||| | |||||||||||||  |||||||||||||||||    
T  10963 agagccgtcaccaaaaccctagtttcttctctatcatacaccaaagatgggtgattttgggtcaatttttgacttaaaatcacccctctaac 11054  T

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Target: scaffold0665 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 1266 - 1174
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctct 95  Q
    ||||| ||| ||||||| |||| |||||| |||| | ||| ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  1266 tcttgtgagccgtcacctaaactctagttacttctctttcatccaccaaagatgggtgatttag-gtcaatttttgacccaaaatcatccctct 1174  T

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Target: scaffold1294 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 729 - 815
Alignment:
Q  12 cgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    ||||| |||||| ||||||||||| ||||| ||||||||| ||  ||||||||  |||||||||||||| ||||||| | |||||||    
T  729 cgtcatcaaaactctagtttcttctccttcatccaccaaaaagatgtgatttaaggtcaatttttgaccaaaaatcatcactctaac 815  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 244573 - 244671
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaa--tttttgacccaaaatcacccctctaac 98  Q
    ||||| ||| |||||||||||||  |||||||||  |||| ||||| |||||||| |||||||| |||||  ||||| |||  ||||||||||||||||    
T  244573 tcttgtgagccgtcaccaaaacctaagtttcttcttcttcatccacaaaagagggttgatttagggtcaattttttttaccataaatcacccctctaac 244671  T

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Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 244768 - 244820
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  244768 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 244820  T

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Target: scaffold0112 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 25653 - 25595
Alignment:
Q  38 cttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctcta 96  Q
    |||||||||||||||||||||| ||||  |||||||||| |||| ||| ||||||||||    
T  25653 cttcgtccaccaaagaggggtggtttaaggtcaattttttaccccaaagcacccctcta 25595  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 137233 - 137173
Alignment:
Q  2 tcttgagagtcgtcaccaaaaccctagtttcttcaccttcgtccaccaaagaggggtgattt 63  Q
    |||||| || ||||||||||||| |||||||||||| ||| | |||||||||||||||||||    
T  137233 tcttgaaagccgtcaccaaaacc-tagtttcttcactttcattcaccaaagaggggtgattt 137173  T

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Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 137075 - 137043
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttgttt 193  Q
    ||||||||||||||||||||| |||||||||||    
T  137075 ttgtgatttcgtcgtcttagtacgacgttgttt 137043  T

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Target: scaffold0316 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 12185 - 12133
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  12185 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttg 12133  T

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Target: scaffold0340 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 11909 - 11856
Alignment:
Q  45 caccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctctaac 98  Q
    |||||||||  | |||||||| ||||||||||||||||||||||| | ||||||    
T  11909 caccaaagatagatgatttagtgtcaatttttgacccaaaatcactcatctaac 11856  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 190
Target Start/End: Complemental strand, 1158 - 1129
Alignment:
Q  161 ttgtgatttcgtcgtcttagtgcgacgttg 190  Q
    ||||||||||||||||||||||||||||||    
T  1158 ttgtgatttcgtcgtcttagtgcgacgttg 1129  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 105008 - 105085
Alignment:
Q  19 aaaaccctagtttcttcaccttcgtccaccaaagaggggtgatttagcgtcaatttttgacccaaaatcacccctcta 96  Q
    ||||||||| ||| |||  |||| |||||||||||| |||| ||||  ||||| ||||||||| |||||| |||||||    
T  105008 aaaaccctaatttattcttcttcatccaccaaagagaggtggtttaaggtcaaattttgaccccaaatcagccctcta 105085  T

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Target: scaffold0722 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 5508 - 5456
Alignment:
Q  168 ttcgtcgtcttagtgcgacgttgtttatttttcttgtttcgttcatgtatttg 220  Q
    ||||||||||| |||||||||||||| | |||||||||||  ||| |||||||    
T  5508 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 5456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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