View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19862_low_6 (Length: 312)

Name: NF19862_low_6
Description: NF19862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19862_low_6
NF19862_low_6
[»] chr4 (39 HSPs)
chr4 (107-301)||(32966529-32966724)
chr4 (106-167)||(50503252-50503313)
chr4 (119-173)||(4390776-4390830)
chr4 (107-167)||(30561432-30561492)
chr4 (21-57)||(32966471-32966507)
chr4 (114-178)||(45780100-45780164)
chr4 (117-172)||(20148066-20148121)
chr4 (241-292)||(32955426-32955477)
chr4 (105-175)||(5460076-5460146)
chr4 (126-176)||(21370566-21370616)
chr4 (54-96)||(32966490-32966532)
chr4 (114-172)||(45906887-45906945)
chr4 (114-172)||(53407908-53407966)
chr4 (126-175)||(4516511-4516560)
chr4 (92-173)||(11051106-11051187)
chr4 (126-175)||(11151263-11151312)
chr4 (114-167)||(12233315-12233368)
chr4 (92-173)||(40496773-40496854)
chr4 (113-173)||(22431541-22431601)
chr4 (123-167)||(33116827-33116871)
chr4 (139-175)||(40120667-40120703)
chr4 (126-173)||(4392067-4392114)
chr4 (126-173)||(7707138-7707185)
chr4 (126-173)||(8942640-8942687)
chr4 (126-173)||(22037694-22037741)
chr4 (126-173)||(27184969-27185016)
chr4 (105-172)||(33510111-33510178)
chr4 (105-172)||(37971045-37971112)
chr4 (126-173)||(43225062-43225109)
chr4 (126-173)||(56373209-56373256)
chr4 (126-172)||(27397100-27397146)
chr4 (126-172)||(29414263-29414309)
chr4 (126-176)||(37114633-37114683)
chr4 (127-176)||(4354957-4355006)
chr4 (126-175)||(8829135-8829184)
chr4 (127-172)||(11601438-11601483)
chr4 (129-178)||(42123864-42123913)
chr4 (126-175)||(56269411-56269460)
chr4 (114-174)||(31679604-31679664)
[»] chr1 (27 HSPs)
chr1 (105-175)||(7780486-7780556)
chr1 (92-173)||(40720218-40720299)
chr1 (114-173)||(13120940-13120999)
chr1 (106-161)||(41004345-41004400)
chr1 (92-174)||(42613431-42613513)
chr1 (126-175)||(36300422-36300471)
chr1 (114-179)||(41150561-41150626)
chr1 (126-174)||(44910595-44910643)
chr1 (126-181)||(1918821-1918876)
chr1 (98-169)||(25135738-25135809)
chr1 (126-173)||(29379775-29379822)
chr1 (126-173)||(29586931-29586978)
chr1 (114-165)||(33152698-33152749)
chr1 (126-173)||(39827337-39827384)
chr1 (126-173)||(42063611-42063658)
chr1 (126-172)||(15314018-15314064)
chr1 (127-173)||(19898241-19898287)
chr1 (126-172)||(26205072-26205118)
chr1 (127-173)||(29703526-29703572)
chr1 (126-172)||(30780064-30780110)
chr1 (126-176)||(32367706-32367756)
chr1 (126-172)||(33561201-33561247)
chr1 (127-172)||(7710311-7710356)
chr1 (126-174)||(27642569-27642617)
chr1 (113-173)||(34319295-34319355)
chr1 (130-174)||(36838021-36838065)
chr1 (139-175)||(49219786-49219822)
[»] chr6 (20 HSPs)
chr6 (100-172)||(21897482-21897554)
chr6 (93-172)||(5300925-5301004)
chr6 (114-176)||(28077219-28077281)
chr6 (126-176)||(34684368-34684418)
chr6 (126-175)||(28721112-28721161)
chr6 (126-174)||(1805719-1805767)
chr6 (126-173)||(559081-559128)
chr6 (126-173)||(2443194-2443241)
chr6 (98-176)||(6830781-6830866)
chr6 (98-173)||(22756993-22757068)
chr6 (126-173)||(27719941-27719988)
chr6 (126-172)||(6709047-6709093)
chr6 (126-176)||(7316926-7316976)
chr6 (126-172)||(12140154-12140200)
chr6 (114-172)||(32732541-32732599)
chr6 (126-172)||(34232222-34232268)
chr6 (126-167)||(31451307-31451348)
chr6 (93-134)||(33454492-33454533)
chr6 (127-172)||(34904682-34904727)
chr6 (139-175)||(10856875-10856911)
[»] chr5 (33 HSPs)
chr5 (90-167)||(36027269-36027346)
chr5 (114-173)||(5997247-5997306)
chr5 (93-175)||(8285543-8285625)
chr5 (119-164)||(33695364-33695409)
chr5 (105-173)||(36686568-36686636)
chr5 (126-173)||(2179492-2179539)
chr5 (114-177)||(12362952-12363015)
chr5 (114-173)||(13227902-13227961)
chr5 (107-174)||(22976390-22976457)
chr5 (127-173)||(35640687-35640733)
chr5 (107-172)||(5381186-5381251)
chr5 (127-172)||(6603264-6603309)
chr5 (126-173)||(2672172-2672219)
chr5 (126-173)||(8023285-8023332)
chr5 (114-173)||(32383589-32383648)
chr5 (126-173)||(39276169-39276216)
chr5 (139-177)||(1710550-1710588)
chr5 (113-167)||(2498428-2498482)
chr5 (119-173)||(11061819-11061873)
chr5 (126-172)||(12714052-12714098)
chr5 (126-172)||(12775280-12775326)
chr5 (126-172)||(13156239-13156285)
chr5 (123-173)||(15531199-15531249)
chr5 (127-173)||(25871661-25871707)
chr5 (126-172)||(43403233-43403279)
chr5 (126-175)||(1175564-1175613)
chr5 (114-167)||(9586489-9586542)
chr5 (126-167)||(15444199-15444240)
chr5 (98-167)||(26698350-26698419)
chr5 (98-167)||(26968082-26968151)
chr5 (126-175)||(35235078-35235127)
chr5 (126-175)||(35235892-35235941)
chr5 (126-174)||(16856319-16856367)
[»] chr2 (26 HSPs)
chr2 (92-173)||(38843561-38843642)
chr2 (93-173)||(5519358-5519438)
chr2 (105-173)||(8705836-8705904)
chr2 (105-173)||(43506897-43506965)
chr2 (126-173)||(24401447-24401494)
chr2 (114-173)||(37000220-37000279)
chr2 (126-173)||(39168511-39168558)
chr2 (114-163)||(650148-650197)
chr2 (113-174)||(2046465-2046526)
chr2 (107-176)||(4056684-4056753)
chr2 (107-172)||(7399618-7399683)
chr2 (114-175)||(9887720-9887781)
chr2 (105-174)||(31615709-31615778)
chr2 (114-175)||(43136388-43136449)
chr2 (126-174)||(28381977-28382025)
chr2 (126-173)||(2545751-2545798)
chr2 (92-175)||(13762509-13762592)
chr2 (113-172)||(24020632-24020691)
chr2 (105-176)||(41796067-41796138)
chr2 (126-172)||(4452855-4452901)
chr2 (129-175)||(5040536-5040582)
chr2 (126-172)||(13527267-13527313)
chr2 (126-172)||(36711838-36711884)
chr2 (126-167)||(18710917-18710958)
chr2 (105-173)||(9052362-9052430)
chr2 (119-167)||(26912381-26912429)
[»] chr8 (16 HSPs)
chr8 (98-173)||(44157993-44158068)
chr8 (126-175)||(10619612-10619661)
chr8 (90-143)||(36590984-36591037)
chr8 (105-173)||(17116265-17116333)
chr8 (114-173)||(31687410-31687469)
chr8 (93-169)||(18411420-18411489)
chr8 (126-176)||(31582494-31582544)
chr8 (126-175)||(25024126-25024175)
chr8 (126-172)||(32541962-32542008)
chr8 (114-172)||(37586563-37586621)
chr8 (124-169)||(1363143-1363188)
chr8 (126-167)||(28710064-28710105)
chr8 (126-167)||(28717411-28717452)
chr8 (126-167)||(30338304-30338345)
chr8 (126-167)||(39872026-39872067)
chr8 (113-173)||(44318979-44319039)
[»] chr7 (17 HSPs)
chr7 (126-176)||(33203001-33203051)
chr7 (126-177)||(47470378-47470429)
chr7 (108-167)||(47585144-47585203)
chr7 (126-176)||(42375152-42375202)
chr7 (126-175)||(36245741-36245790)
chr7 (126-175)||(42586746-42586795)
chr7 (120-172)||(48730277-48730329)
chr7 (119-174)||(790607-790662)
chr7 (138-169)||(34351304-34351335)
chr7 (114-169)||(45673115-45673170)
chr7 (126-173)||(45686223-45686270)
chr7 (98-172)||(40894146-40894220)
chr7 (126-172)||(43254932-43254978)
chr7 (126-172)||(48831421-48831467)
chr7 (126-167)||(34709979-34710020)
chr7 (126-167)||(46878632-46878673)
chr7 (117-161)||(11465387-11465431)
[»] chr3 (32 HSPs)
chr3 (114-167)||(48943331-48943384)
chr3 (114-174)||(38186519-38186579)
chr3 (107-167)||(45369647-45369707)
chr3 (98-173)||(2852637-2852712)
chr3 (100-167)||(24627462-24627529)
chr3 (114-173)||(29080618-29080677)
chr3 (126-172)||(25571149-25571195)
chr3 (126-176)||(40562673-40562723)
chr3 (93-167)||(52226098-52226172)
chr3 (114-167)||(21707847-21707900)
chr3 (126-175)||(29717563-29717612)
chr3 (114-167)||(35500389-35500442)
chr3 (114-175)||(41519302-41519363)
chr3 (126-175)||(55227123-55227172)
chr3 (126-174)||(2579339-2579387)
chr3 (117-173)||(44946523-44946579)
chr3 (106-174)||(46972782-46972850)
chr3 (126-173)||(37528084-37528131)
chr3 (126-173)||(43526493-43526540)
chr3 (126-168)||(4241052-4241094)
chr3 (127-181)||(40479397-40479451)
chr3 (126-168)||(44846364-44846406)
chr3 (134-167)||(1265226-1265259)
chr3 (126-175)||(19947655-19947704)
chr3 (126-175)||(37089029-37089078)
chr3 (90-135)||(46318045-46318090)
chr3 (119-167)||(32025583-32025631)
chr3 (92-176)||(32981845-32981929)
chr3 (127-175)||(45344378-45344426)
chr3 (126-178)||(52165408-52165460)
chr3 (119-167)||(52867516-52867564)
chr3 (139-179)||(54541381-54541421)
[»] scaffold0009 (1 HSPs)
scaffold0009 (96-172)||(192804-192880)
[»] scaffold0031 (1 HSPs)
scaffold0031 (114-172)||(129503-129561)
[»] scaffold0418 (1 HSPs)
scaffold0418 (92-173)||(5181-5262)
[»] scaffold0197 (1 HSPs)
scaffold0197 (126-175)||(28361-28410)
[»] scaffold0016 (1 HSPs)
scaffold0016 (105-173)||(92842-92910)
[»] scaffold0349 (1 HSPs)
scaffold0349 (126-173)||(9363-9410)
[»] scaffold0116 (1 HSPs)
scaffold0116 (126-173)||(25664-25711)
[»] scaffold0246 (1 HSPs)
scaffold0246 (126-172)||(7797-7843)
[»] scaffold0173 (1 HSPs)
scaffold0173 (126-172)||(22220-22266)
[»] scaffold0122 (1 HSPs)
scaffold0122 (126-172)||(11783-11829)
[»] scaffold0041 (1 HSPs)
scaffold0041 (98-172)||(72064-72138)
[»] scaffold0027 (1 HSPs)
scaffold0027 (126-172)||(41063-41109)
[»] scaffold0362 (1 HSPs)
scaffold0362 (114-175)||(6157-6218)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 8e-95; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 107 - 301
Target Start/End: Original strand, 32966529 - 32966724
Alignment:
Q  107 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc-ttaaacaaacttttttccctttcgcaaaagact 205  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  32966529 atcagctatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcccttaaacacacttttttccctttcccaaaagact 32966628  T
Q  206 tatacttggtagatttttaaaaatgttatttgtggtttttctgcagtggtcatgggaaacaatagtcatggggatttccttcttggtaatacttct 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32966629 tatacttggtagatttttaaaaatgttatttgtggtttttctgcagtggtcatgggaaacaatagtcatggggatttccttcttggtaatacttct 32966724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 50503252 - 50503313
Alignment:
Q  106 tatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||||||||||| |||||| ||||||||||| |||||| ||||||| |||||||||||||||    
T  50503252 tatcagccatcagctataagctatcagctagcttatcagctatccgctatttttaccaaaca 50503313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 4390830 - 4390776
Alignment:
Q  119 ctataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  4390830 ctataagctatcagctagcttatcaactatccgctatttttaccaaacagagcct 4390776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 30561492 - 30561432
Alignment:
Q  107 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||||| ||||||||||| |||| |||||| |||||| ||||||| |||||||||||||||    
T  30561492 atcagctatcaactataagctataagctagcttatcagctatccgctatttttaccaaaca 30561432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 32966471 - 32966507
Alignment:
Q  21 ataacatatagcttatctgctatcagctatcaactat 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  32966471 ataacatatagcttatctgctatcagctatcaactat 32966507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 45780164 - 45780100
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaac 178  Q
    |||| |||||| ||||||||||| ||||||  |||||| ||||||||||||||| ||||||||||    
T  45780164 atcagctataagctatcagctagcttatcagttatccgctatttttaccaaacagagccttaaac 45780100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 20148121 - 20148066
Alignment:
Q  117 aactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||||||| ||| ||||||| ||||||||| ||||||||||||| ||||    
T  20148121 aactataaactatcaactaatttatcagctatccgttgtttttaccaaacagagcc 20148066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 32955426 - 32955477
Alignment:
Q  241 tttttctgcagtggtcatgggaaacaatagtcatggggatttccttcttggt 292  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |||||||||    
T  32955426 tttttctgcagtggtcatggcaaacaatagtgatgggaatttgcttcttggt 32955477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 5460146 - 5460076
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    |||| ||| |||| |||||| ||||||||||| |||| | ||||||| ||||||||||||||| |||||||    
T  5460146 ctataagctatcagctataagctatcagctagcttataagctatccgctatttttaccaaacagagcctta 5460076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 21370566 - 21370616
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||    
T  21370566 ctatcagctagcttatcagctatccgctatttttaccaaacagagccttaa 21370616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 32966490 - 32966532
Alignment:
Q  54 ctatcatctatcagctataaactatataagatatcggccatca 96  Q
    |||||| |||||| |||||||||||||||||||||||||||||    
T  32966490 ctatcagctatcaactataaactatataagatatcggccatca 32966532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 45906887 - 45906945
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  45906887 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 45906945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 53407908 - 53407966
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  53407908 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 53407966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 4516560 - 4516511
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  4516560 ctatcagctagcttatcagttatccgttatttttaccaaacagagcctta 4516511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 11051106 - 11051187
Alignment:
Q  92 catcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||| |||||| ||||||| ||||| |||||| | ||||||||| |||| | ||||||  ||||| |||||||||||||||    
T  11051106 catcagctataagctatcagtcatcagctataatccatcagctagcttataagctatccactatttctaccaaacaaagcct 11051187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 11151312 - 11151263
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  11151312 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 11151263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 12233368 - 12233315
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||| |||||| ||||||||||| |||||||||||||| ||||||||| |||||    
T  12233368 atcagctataagctatcagctagcttatcaactatccgctatttttactaaaca 12233315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 40496854 - 40496773
Alignment:
Q  92 catcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||| |||| | ||||||| | ||| |||||| ||||||||||| |||||| ||| ||| ||||||||||||||| |||||    
T  40496854 catcagctatcagctatcagtcgtcagctataagctatcagctagcttatcagctaaccgctatttttaccaaacagagcct 40496773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 22431541 - 22431601
Alignment:
Q  113 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||| |||| ||||||||||||| |||| | ||||||| ||||||||||||||| |||||    
T  22431541 catcagctatcaactatcagctagcttataagctatccgctatttttaccaaacagagcct 22431601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 33116827 - 33116871
Alignment:
Q  123 aaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||    
T  33116827 aaactatcagctagcttatcagctatccgctatttttaccaaaca 33116871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 40120667 - 40120703
Alignment:
Q  139 tatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40120667 tatcaactatccgttatttttaccaaacagagcctta 40120703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 4392114 - 4392067
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  4392114 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 4392067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 7707138 - 7707185
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  7707138 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 7707185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 8942640 - 8942687
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  8942640 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 8942687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 22037741 - 22037694
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  22037741 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 22037694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 27185016 - 27184969
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  27185016 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 27184969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 33510111 - 33510178
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||| |||||||| |||||| ||||||||||| ||||||   ||||||||||||||| ||||| ||||    
T  33510111 ctataagccatcagctataagctatcagctagcttatcagtcatccgttatttttacaaaacagagcc 33510178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 37971045 - 37971112
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||||||| |||| ||| || |||||| |||  |||||| ||||||| ||||||||||||||||||||    
T  37971045 ctatcagctatcagctaaaagctatcaactaacttatcagctatccgctatttttaccaaacaaagcc 37971112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 43225109 - 43225062
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  43225109 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 43225062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 56373209 - 56373256
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  56373209 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 56373256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 27397146 - 27397100
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  27397146 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 27397100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 29414263 - 29414309
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  29414263 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 29414309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 37114683 - 37114633
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    ||||||||||| |||||| ||||| | ||||||||||||||| ||||||||    
T  37114683 ctatcagctagcttatcagctatctgctatttttaccaaacagagccttaa 37114633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 4355006 - 4354957
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    |||||||||| |||||| ||||||||||||||||| ||||| ||| ||||    
T  4355006 tatcagctagcttatcagctatccgttatttttacgaaacagagctttaa 4354957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 8829184 - 8829135
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| |||||||    
T  8829184 ctatcagctagcttattagctatccgctatttttaccaaacagagcctta 8829135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 11601438 - 11601483
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  11601438 tatcagctagcttatcagctatccgctatttttaccaaacagagcc 11601483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 42123913 - 42123864
Alignment:
Q  129 tcagctagtttatcaactatccgttatttttaccaaacaaagccttaaac 178  Q
    |||| ||| |||||| ||||||| ||||||||||||||||||||| ||||    
T  42123913 tcagttagcttatcagctatccgctatttttaccaaacaaagcctaaaac 42123864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 56269460 - 56269411
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| |||||||    
T  56269460 ctatcagctagcttataagctatccgctatttttaccaaacagagcctta 56269411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 31679604 - 31679664
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    |||| ||| ||||||| |||||  |||||| ||||||| ||||||||||||||| ||||||    
T  31679604 atcagctaaaaactattagctaacttatcagctatccgctatttttaccaaacagagcctt 31679664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 7780556 - 7780486
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  7780556 ctatcagccatcagctataagctatcagctagcttataaactatccgttatttttaccaaacagagcctta 7780486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 40720218 - 40720299
Alignment:
Q  92 catcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||| |||||| |||||| |||||| |||||| ||||||||||| ||||||   ||||||||||| ||||||||| |||||    
T  40720218 catcagctataagctatcaaccatcagctataagctatcagctagcttatcagtcatccgttatttctaccaaacagagcct 40720299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 13120999 - 13120940
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  13120999 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcct 13120940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 41004400 - 41004345
Alignment:
Q  106 tatcagccatcaactataaactatcagctagtttatcaactatccgttatttttac 161  Q
    |||||| ||||| ||||||| |||||||||  ||||||||||||||||||||||||    
T  41004400 tatcagtcatcagctataaaatatcagctatcttatcaactatccgttatttttac 41004345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 42613513 - 42613431
Alignment:
Q  92 catcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    ||||| |||||| | ||||||||||| |||||| ||||||||||| ||||||   ||||| |||||||||| |||| ||||||    
T  42613513 catcagctataagccatcagccatcagctataagctatcagctagcttatcagtcatccgctatttttaccgaacatagcctt 42613431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 36300471 - 36300422
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  36300471 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 36300422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 41150626 - 41150561
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaaca 179  Q
    |||| ||| |||||||||||||  |||||| ||||||| ||||||||||||||| ||||| |||||    
T  41150626 atcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaacagagcctaaaaca 41150561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 44910595 - 44910643
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  44910595 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctt 44910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 1918821 - 1918876
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaacaaa 181  Q
    |||||| |||| |||||| ||||||| ||||||||||||||| |||||||| ||||    
T  1918821 ctatcaactagcttatcagctatccgctatttttaccaaacagagccttaatcaaa 1918876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 25135738 - 25135809
Alignment:
Q  98 ctataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaa 169  Q
    ||||||||||| || ||| | |||||| ||||||| |||||||| |  |||||| |||||||||||||||||    
T  25135738 ctataaactattagtcatgagctataagctatcagttagtttataagttatccgctatttttaccaaacaaa 25135809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 29379775 - 29379822
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  29379775 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 29379822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 29586931 - 29586978
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  29586931 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 29586978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 33152698 - 33152749
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaa 165  Q
    |||| |||||||||||||||||| |||||| ||||||| |||||||| ||||    
T  33152698 atcagctataaactatcagctagcttatcagctatccgctatttttatcaaa 33152749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 39827337 - 39827384
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  39827337 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 39827384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 42063658 - 42063611
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  42063658 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 42063611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 15314018 - 15314064
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  15314018 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 15314064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 19898287 - 19898241
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  19898287 tatcagctagcttatcagctatccgctatttttaccaaacagagcct 19898241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 26205072 - 26205118
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  26205072 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 26205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 29703572 - 29703526
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  29703572 tatcagctagcttatcagctatccgctatttttaccaaacagagcct 29703526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 30780064 - 30780110
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  30780064 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 30780110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 32367756 - 32367706
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    ||||||||||  |||||| ||||||| ||||||||||||||| ||||||||    
T  32367756 ctatcagctaacttatcagctatccgctatttttaccaaacagagccttaa 32367706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 33561247 - 33561201
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  33561247 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 33561201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 7710356 - 7710311
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  7710356 tatcagctagcttatcagctatccgctatttttaccaaacagagcc 7710311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 27642617 - 27642569
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    |||||| |||| ||||||| ||||| |||||||||||||||| ||||||    
T  27642617 ctatcaactagcttatcaattatccattatttttaccaaacatagcctt 27642569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 34319295 - 34319355
Alignment:
Q  113 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||| |||||| ||||||||||  |||| | ||||||| ||||||||||||||| |||||    
T  34319295 catcagctataagctatcagctaacttataagctatccgctatttttaccaaacagagcct 34319355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 36838065 - 36838021
Alignment:
Q  130 cagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    ||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  36838065 cagctagcttatcagctatccgctatttttaccaaacagagcctt 36838021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 49219822 - 49219786
Alignment:
Q  139 tatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  49219822 tatcaactatccgctatttttaccaaacagagcctta 49219786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 21897482 - 21897554
Alignment:
Q  100 ataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||||| || |||||||| |||||| |||| |||| ||||||||||||||||||||||||||||||    
T  21897482 ataaactatcagctataaactataagctatcaactagcttataaactatccgttatttttaccaaacaaagcc 21897554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 5301004 - 5300925
Alignment:
Q  93 atcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||| |||||| ||||||| ||||| |||||| |||| |||||| |||| ||||||||| ||||||||||||||| ||||    
T  5301004 atcagctataagctatcagtcatcagctataagctataagctagcttataaactatccgctatttttaccaaacagagcc 5300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 28077219 - 28077281
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    |||| |||||| ||||||| ||| |||| ||||||||| ||||||||||||||| ||||||||    
T  28077219 atcagctataagctatcaggtagcttataaactatccgctatttttaccaaacagagccttaa 28077281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 34684418 - 34684368
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||    
T  34684418 ctatcagctagcttatcagctatccgctatttttaccaaacagagccttaa 34684368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 28721161 - 28721112
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  28721161 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 28721112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 1805767 - 1805719
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  1805767 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctt 1805719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 559081 - 559128
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  559081 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 559128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 2443194 - 2443241
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  2443194 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 2443241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 6830781 - 6830866
Alignment:
Q  98 ctataaactatcagccatcaactataaactatcagc-------tagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    |||||||||||||| |||||||||||||| ||||||       ||| ||||||||||||| |||| ||||||||||| | ||||||    
T  6830781 ctataaactatcagtcatcaactataaaccatcagctattggttagcttatcaactatccattatatttaccaaacagatccttaa 6830866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 22756993 - 22757068
Alignment:
Q  98 ctataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||| |||||||| |||| |||||| |||| |||||  |||| | ||||||| ||||||||||||||| |||||    
T  22756993 ctataagctatcagctatcagctataagctataagctaacttataagctatccgctatttttaccaaacagagcct 22757068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 27719988 - 27719941
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  27719988 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 27719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 6709093 - 6709047
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  6709093 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 6709047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 7316976 - 7316926
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| ||||||||    
T  7316976 ctatcagctagcttataagctatccgctatttttaccaaacagagccttaa 7316926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 12140200 - 12140154
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||||||||||  |||||| ||||||||||||||| ||||    
T  12140200 ctatcagctagtttatcagttatccgctatttttaccaaacagagcc 12140154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 32732541 - 32732599
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||| |||||| |||||| |||| |||||| ||||||| ||||||||||||||| ||||    
T  32732541 atcagctataagctatcatctagcttatcagctatccgctatttttaccaaacagagcc 32732599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 34232268 - 34232222
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  34232268 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 34232222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 31451348 - 31451307
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  31451348 ctatcagctagcttatcagctatccgctatttttaccaaaca 31451307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 33454492 - 33454533
Alignment:
Q  93 atcaactataaactatcagccatcaactataaactatcagct 134  Q
    |||| |||||| ||||||||||||| ||||||||||||||||    
T  33454492 atcagctataagctatcagccatcagctataaactatcagct 33454533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 34904682 - 34904727
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||||||||  |||||| ||||||||||||||||||||||| ||||    
T  34904682 tatcagctaacttatcagctatccgttatttttaccaaacagagcc 34904727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 10856875 - 10856911
Alignment:
Q  139 tatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  10856875 tatcagctatccgctatttttaccaaacaaagcctta 10856911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 36027346 - 36027269
Alignment:
Q  90 gccatcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||||||||||||| |||||||||||||  ||||| |||||| ||||||||||||  ||||| |||||||||||||||    
T  36027346 gccatcaactataagctatcagccatcagttataatctatcaactagtttatcaatcatccgctatttttaccaaaca 36027269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 5997306 - 5997247
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| |||||||||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  5997306 atcagctataaactatcagctagcttatcagctatccgctatttttaccaaacagagcct 5997247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 8285543 - 8285625
Alignment:
Q  93 atcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    |||| |||||||||||||| | |||  ||||| |||| |||||| |||||| ||||||| ||||||||||||||| |||||||    
T  8285543 atcagctataaactatcagtcttcacttataagctataagctagcttatcagctatccgctatttttaccaaacagagcctta 8285625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 33695364 - 33695409
Alignment:
Q  119 ctataaactatcagctagtttatcaactatccgttatttttaccaa 164  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  33695364 ctataaactatcagctagcttatcaactatccgctatttttaccaa 33695409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 36686568 - 36686636
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| ||| |||| ||| |||||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  36686568 ctataagctatcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcct 36686636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 2179492 - 2179539
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  2179492 ctatcagctagcttatcaactatccgctatttttaccaaacagagcct 2179539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 12363015 - 12362952
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaa 177  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| || ||||||    
T  12363015 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagtcttaaa 12362952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 13227961 - 13227902
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  13227961 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcct 13227902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 22976457 - 22976390
Alignment:
Q  107 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    |||||| |||| ||||||||||| |||||| |||||| ||||||| |||||||||||| || ||||||    
T  22976457 atcagctatcagctataaactataagctagcttatcagctatccgctatttttaccaagcagagcctt 22976390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 35640687 - 35640733
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||||    
T  35640687 tatcagctagcttatcaactatccgctatttttaccaaacagagcct 35640733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 5381251 - 5381186
Alignment:
Q  107 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||||| |||| |||||| |||| |||||| |||||| ||||||| ||||||||||||||| ||||    
T  5381251 atcagctatcagctataagctataagctagcttatcagctatccgctatttttaccaaacagagcc 5381186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 6603309 - 6603264
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  6603309 tatcagctagtttatcagctatccgctatttttaccaaacagagcc 6603264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 2672172 - 2672219
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  2672172 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 2672219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 8023332 - 8023285
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  8023332 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 8023285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 32383589 - 32383648
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| ||| |||||||||||||  |||||| ||||||| ||||||||||||||| |||||    
T  32383589 atcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaacagagcct 32383648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 39276169 - 39276216
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  39276169 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 39276216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 1710588 - 1710550
Alignment:
Q  139 tatcaactatccgttatttttaccaaacaaagccttaaa 177  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  1710588 tatcaactatccgctatttttaccaaacagagccttaaa 1710550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 2498428 - 2498482
Alignment:
Q  113 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||| |||||||||||||||||  |||||| |||| ||||||||||| ||||||    
T  2498428 catcagctataaactatcagctaacttatcagctatacgttatttttatcaaaca 2498482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 11061873 - 11061819
Alignment:
Q  119 ctataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||| |||| |||||| |||||| ||||||| ||||||||||||||| |||||    
T  11061873 ctataagctataagctagcttatcagctatccgctatttttaccaaacagagcct 11061819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 12714052 - 12714098
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  12714052 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 12714098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 12775280 - 12775326
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  12775280 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 12775326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 13156285 - 13156239
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  13156285 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 13156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 15531199 - 15531249
Alignment:
Q  123 aaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||||||||||  |||||| ||||||| ||||||||||||||| |||||    
T  15531199 aaactatcagctaacttatcagctatccgctatttttaccaaacagagcct 15531249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 25871707 - 25871661
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||||||||| ||||||| |||||||| |||||| |||||    
T  25871707 tatcagctagtttatcagctatccgctatttttatcaaacagagcct 25871661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 43403233 - 43403279
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  43403233 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 43403279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 1175564 - 1175613
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| |||||||    
T  1175564 ctatcagctagcttataagctatccgctatttttaccaaacagagcctta 1175613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 9586542 - 9586489
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||| ||| |||||||||||||  |||||| ||||||| |||||||||||||||    
T  9586542 atcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaaca 9586489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 15444199 - 15444240
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  15444199 ctatcagctagcttatcagctatccgctatttttaccaaaca 15444240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 26698419 - 26698350
Alignment:
Q  98 ctataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||||| ||||||| ||||| |||||| |||| |||||  ||||||  ||||||||||||||| ||||||    
T  26698419 ctataagctatcagtcatcagctataagctataagctaacttatcagttatccgttatttttatcaaaca 26698350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 26968151 - 26968082
Alignment:
Q  98 ctataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||||| ||||||| ||||| |||||| |||| |||||  ||||||  ||||||||||||||| ||||||    
T  26968151 ctataagctatcagtcatcagctataagctataagctaacttatcagttatccgttatttttatcaaaca 26968082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 35235127 - 35235078
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||  |||||| ||||||| ||||||||||||||| |||||||    
T  35235127 ctatcagctaacttatcagctatccgctatttttaccaaacagagcctta 35235078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 35235941 - 35235892
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||  |||||| ||||||| ||||||||||||||| |||||||    
T  35235941 ctatcagctaacttatcagctatccgctatttttaccaaacagagcctta 35235892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 16856367 - 16856319
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    |||||| |||| |||||| ||||||| ||||||||||||||| ||||||    
T  16856367 ctatcaactagcttatcagctatccgctatttttaccaaacagagcctt 16856319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 38843561 - 38843642
Alignment:
Q  92 catcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||| |||||| |||||| | |||| |||||||||||||||||| |||||| ||||||| | |||||||||||||||||||    
T  38843561 catcagctataagctatcaactatcagctataaactatcagctagcttatcagctatccgctgtttttaccaaacaaagcct 38843642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 5519438 - 5519358
Alignment:
Q  93 atcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| |||||| ||||||  |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  5519438 atcagctataagctatcattcatcaactatcagctataagctagtttatcagctatccgttatttttaccaaacagagcct 5519358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 8705904 - 8705836
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| ||| |||| ||| |||||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  8705904 ctataagctatcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcct 8705836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 43506965 - 43506897
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| ||| |||| ||| || ||||||||||| |||||| ||||||||||||||||||||||| |||||    
T  43506965 ctataagctatcagctaaaagctatcagctagcttatcagctatccgttatttttaccaaacagagcct 43506897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 24401494 - 24401447
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  24401494 ctatcagctagtttatcagctatccgctatttttaccaaacagagcct 24401447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 37000220 - 37000279
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| ||| ||||||||| |||| |||||||||||||| ||||||||||||||| |||||    
T  37000220 atcagctaaaaactatcaactagcttatcaactatccgctatttttaccaaacagagcct 37000279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 39168511 - 39168558
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||| |||| |||||||||||||||||||||||||||||| |||||    
T  39168511 ctatcaactagcttatcaactatccgttatttttaccaaacagagcct 39168558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 650197 - 650148
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttacca 163  Q
    |||| ||| |||||||||||||| |||||||||||||| |||||||||||    
T  650197 atcagctaaaaactatcagctagcttatcaactatccgctatttttacca 650148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 2046526 - 2046465
Alignment:
Q  113 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    ||||| ||||||||||| |||||| |||||||  ||||| ||||||||||||||| ||||||    
T  2046526 catcagctataaactataagctagcttatcaatcatccgctatttttaccaaacagagcctt 2046465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 4056684 - 4056753
Alignment:
Q  107 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    ||||| ||||| |||||| ||||||||||| |||| | ||||||| ||||||||||||||| ||| ||||    
T  4056684 atcagtcatcagctataagctatcagctagcttataagctatccgctatttttaccaaacagagctttaa 4056753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 7399683 - 7399618
Alignment:
Q  107 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||||| |||| |||||| |||| |||||| |||||| ||||||| ||||||||||||||| ||||    
T  7399683 atcagctatcagctataagctataagctagcttatcagctatccgctatttttaccaaacagagcc 7399618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 9887720 - 9887781
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    |||| |||||| ||||||||||  |||||| ||||||| ||||||||||||||| |||||||    
T  9887720 atcagctataagctatcagctaacttatcagctatccgctatttttaccaaacagagcctta 9887781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 31615778 - 31615709
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    |||| ||| |||| ||| || |||||||||||||||||| ||||||  ||||||||||||||| ||||||    
T  31615778 ctataagctatcagctaaaagctatcagctagtttatcagctatccactatttttaccaaacagagcctt 31615709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 43136388 - 43136449
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    |||| |||||| ||||||||||  |||||| ||||||| ||||||||||||||| |||||||    
T  43136388 atcagctataagctatcagctaccttatcagctatccgctatttttaccaaacagagcctta 43136449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 28382025 - 28381977
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  28382025 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctt 28381977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 2545798 - 2545751
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  2545798 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 2545751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 13762509 - 13762592
Alignment:
Q  92 catcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||| |||||| |||||||| |  | |||||||||||||| ||| |||| | ||||||| |||||||| |||||| |||||||    
T  13762509 catcagctataagctatcagctaaaagctataaactatcagttagcttataagctatccgctatttttatcaaacagagcctta 13762592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 24020632 - 24020691
Alignment:
Q  113 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||| |||||||||||||||||| |||| | ||||||  ||||||||||||||| ||||    
T  24020632 catcagctataaactatcagctagcttataagctatccactatttttaccaaacagagcc 24020691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 41796138 - 41796067
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    |||||||| |||| ||| || ||||||||||  |||||| ||||| | ||||||||||||||| ||||||||    
T  41796138 ctatcagctatcagctaaaagctatcagctaacttatcagctatctgctatttttaccaaacagagccttaa 41796067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 4452901 - 4452855
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  4452901 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 4452855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 5040536 - 5040582
Alignment:
Q  129 tcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    |||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  5040536 tcagctagcttatcagctatccgctatttttaccaaacagagcctta 5040582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 13527313 - 13527267
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  13527313 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 13527267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 36711884 - 36711838
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  36711884 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 36711838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 18710917 - 18710958
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  18710917 ctatcagctagcttatcagctatccgctatttttaccaaaca 18710958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 9052430 - 9052362
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||||| ||||||  |||||||||| ||||||   ||||| ||||||||||| ||| |||||    
T  9052430 ctatcagccatcagctataagttatcagctagcttatcagtcatccgctatttttaccatacagagcct 9052362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 26912381 - 26912429
Alignment:
Q  119 ctataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||| |||||||| ||||||  |||||| |||||||||||||||    
T  26912381 ctataaactttcagctagcttatcagttatccgctatttttaccaaaca 26912429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 44157993 - 44158068
Alignment:
Q  98 ctataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||| |||||||| |||| |||||| ||||||||||| |||| | ||||||| ||||||||||||||| |||||    
T  44157993 ctataagctatcagctatcagctataagctatcagctagcttataagctatccgctatttttaccaaacagagcct 44158068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 10619612 - 10619661
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  10619612 ctatcagctagcttatcaactatccgctatttttaccaaacagagcctta 10619661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 36590984 - 36591037
Alignment:
Q  90 gccatcaactataaactatcagccatcaactataaactatcagctagtttatca 143  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  36590984 gccatcagctatatactatcagccatcagctataaactatcagctagcttatca 36591037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 17116265 - 17116333
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| ||| |||| ||| |||||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  17116265 ctataagctatcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcct 17116333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 31687469 - 31687410
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| ||| |||||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  31687469 atcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcct 31687410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 18411420 - 18411489
Alignment:
Q  93 atcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaa 169  Q
    |||| |||||||||||||||||||||||||  |||||       ||||||||||||||| |||||||||||||||||    
T  18411420 atcagctataaactatcagccatcaactatcgactat-------tttatcaactatccgctatttttaccaaacaaa 18411489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 31582494 - 31582544
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||    
T  31582494 ctatcagctagcttatcagctatccgctatttttaccaaacagagccttaa 31582544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 25024126 - 25024175
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  25024126 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 25024175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 32541962 - 32542008
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  32541962 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 32542008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 37586621 - 37586563
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||| ||| ||||||||| |||| |||||| |||| || ||||||||||||||||||||    
T  37586621 atcagctaaaaactatcaactagcttatcagctattcgctatttttaccaaacaaagcc 37586563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 1363188 - 1363143
Alignment:
Q  124 aactatcagctagtttatcaactatccgttatttttaccaaacaaa 169  Q
    ||||||||||||  ||||||| |||||| |||||||||||||||||    
T  1363188 aactatcagctaacttatcaattatccgctatttttaccaaacaaa 1363143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 28710064 - 28710105
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||||  |||||||||||||| |||||||||||||||    
T  28710064 ctatcagctaacttatcaactatccgctatttttaccaaaca 28710105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 28717411 - 28717452
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||||  |||||||||||||| |||||||||||||||    
T  28717411 ctatcagctaacttatcaactatccgctatttttaccaaaca 28717452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 30338304 - 30338345
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||||  |||||| |||||||||||||||||||||||    
T  30338304 ctatcagctaacttatcagctatccgttatttttaccaaaca 30338345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 39872026 - 39872067
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  39872026 ctatcagctagcttatcagctatccgctatttttaccaaaca 39872067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 44318979 - 44319039
Alignment:
Q  113 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||||| |||||||||  |||| | ||||||| |||||||||||| || |||||    
T  44318979 catcaactataaattatcagctaacttataagctatccgctatttttaccaaccagagcct 44319039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 33203051 - 33203001
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  33203051 ctatcagctagtttatcagctatccgctatttttaccaaacagagccttaa 33203001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 47470429 - 47470378
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaa 177  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||||    
T  47470429 ctatcagctagcttatcagctatccgctatttttaccaaacatagccttaaa 47470378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 47585144 - 47585203
Alignment:
Q  108 tcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||| ||||| |||||| ||||||||||| |||||| ||||||||| |||||||||||||    
T  47585144 tcagtcatcagctataagctatcagctagcttatcagctatccgttgtttttaccaaaca 47585203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 42375202 - 42375152
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||    
T  42375202 ctatcagctagcttatcagctatccgctatttttaccaaacagagccttaa 42375152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 36245790 - 36245741
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  36245790 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 36245741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 42586795 - 42586746
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  42586795 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 42586746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 48730277 - 48730329
Alignment:
Q  120 tataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||| ||||||||||| |||||||||||||| ||||||| ||||||| ||||    
T  48730277 tataagctatcagctagcttatcaactatccgctatttttcccaaacagagcc 48730329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 790662 - 790607
Alignment:
Q  119 ctataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    |||||| |||| |||||| |||||| ||||||| ||||||||||||||| ||||||    
T  790662 ctataagctataagctagcttatcagctatccgctatttttaccaaacagagcctt 790607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 169
Target Start/End: Complemental strand, 34351335 - 34351304
Alignment:
Q  138 ttatcaactatccgttatttttaccaaacaaa 169  Q
    ||||||||||||||||||||||||||||||||    
T  34351335 ttatcaactatccgttatttttaccaaacaaa 34351304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 45673115 - 45673170
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaa 169  Q
    ||||| ||||| ||||||||||| ||||||  |||||| |||||||||||||||||    
T  45673115 atcaattataagctatcagctagcttatcagatatccgctatttttaccaaacaaa 45673170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 45686270 - 45686223
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  45686270 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 45686223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 40894146 - 40894220
Alignment:
Q  98 ctataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||||| ||||||| ||||| |||||| |||||| |||  ||||||  |||||| ||||||||||||||| ||||    
T  40894146 ctataagctatcagtcatcagctataagctatcaactaacttatcagttatccgctatttttaccaaacatagcc 40894220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 43254932 - 43254978
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  43254932 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 43254978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 48831467 - 48831421
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  48831467 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 48831421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 34709979 - 34710020
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  34709979 ctatcagctagcttatcagctatccgctatttttaccaaaca 34710020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 46878673 - 46878632
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  46878673 ctatcagctagcttatcagctatccgctatttttaccaaaca 46878632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 11465431 - 11465387
Alignment:
Q  117 aactataaactatcagctagtttatcaactatccgttatttttac 161  Q
    |||||| ||||||||||||| |||| ||||||||| |||||||||    
T  11465431 aactatcaactatcagctagcttataaactatccgctatttttac 11465387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 48943331 - 48943384
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  48943331 atcagctaaaaactatcagctagtttatcagctatccgctatttttaccaaaca 48943384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 38186519 - 38186579
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  38186519 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcctt 38186579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 45369647 - 45369707
Alignment:
Q  107 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||||| ||||||||||| ||||||||||  |||||| ||||||| |||||||||||||||    
T  45369647 atcagctatcaactataagctatcagctaacttatcagctatccgctatttttaccaaaca 45369707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 2852637 - 2852712
Alignment:
Q  98 ctataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||| ||||||| ||||| |||||| |||| || ||| |||||| ||||||| ||||||||||||||| |||||    
T  2852637 ctataagctatcagtcatcagctataagctataagttagcttatcagctatccgctatttttaccaaacagagcct 2852712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 24627529 - 24627462
Alignment:
Q  100 ataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||| ||||||| ||||| |||| | |||| |||||| |||||||||||||| |||||||||||||||    
T  24627529 ataagctatcagtcatcatctatcagctataagctagcttatcaactatccgctatttttaccaaaca 24627462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 29080677 - 29080618
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  29080677 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcct 29080618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 25571149 - 25571195
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||    
T  25571149 ctatcagctagcttatcagctatccgttatttttaccaaacatagcc 25571195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 40562723 - 40562673
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||    
T  40562723 ctatcagctagcttatcagctatccgctatttttaccaaacagagccttaa 40562673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 52226098 - 52226172
Alignment:
Q  93 atcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||| ||||||  ||||| |||||| |||||||||||||||||| ||||||   ||||| |||||||||||||||    
T  52226098 atcagctataagttatcaaccatcagctataaactatcagctagcttatcagtcatccgctatttttaccaaaca 52226172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 21707847 - 21707900
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||| |||||| ||||||||||| |||||| ||||||| |||||||||||||||    
T  21707847 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaaca 21707900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 29717612 - 29717563
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  29717612 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 29717563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 35500389 - 35500442
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||| |||||| ||||||||||| |||||| ||||||| |||||||||||||||    
T  35500389 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaaca 35500442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 41519302 - 41519363
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    |||| |||||| |||| |||||| |||||| ||||||||| ||||||||||||| |||||||    
T  41519302 atcagctataagctataagctagcttatcagctatccgttttttttaccaaacagagcctta 41519363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 55227172 - 55227123
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  55227172 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 55227123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 2579387 - 2579339
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  2579387 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctt 2579339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 44946579 - 44946523
Alignment:
Q  117 aactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||||||| ||||||||||  |||| | ||||||||||||||||||||||| |||||    
T  44946579 aactataagctatcagctaacttataagctatccgttatttttaccaaacagagcct 44946523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 46972782 - 46972850
Alignment:
Q  106 tatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 174  Q
    ||||||| |||| ||| || ||||||||||| |||| | ||||||| ||||||||||||||| ||||||    
T  46972782 tatcagctatcagctaaaagctatcagctagcttataagctatccgctatttttaccaaacagagcctt 46972850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 37528131 - 37528084
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  37528131 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 37528084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 43526493 - 43526540
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||  |||||||||||||| ||||||||||||||| |||||    
T  43526493 ctatcagctaacttatcaactatccgctatttttaccaaacagagcct 43526540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 4241052 - 4241094
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaa 168  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||    
T  4241052 ctatcagctagcttatcagctatccgttatttttactaaacaa 4241094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 40479451 - 40479397
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaacaaa 181  Q
    |||||| ||| |||||| ||||||| ||||||||||||||| ||||| |||||||    
T  40479451 tatcagttagcttatcagctatccgctatttttaccaaacagagcctaaaacaaa 40479397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 44846364 - 44846406
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaa 168  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||    
T  44846364 ctatcagctagcttatcagctatccgctatttttaccaaacaa 44846406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 1265259 - 1265226
Alignment:
Q  134 tagtttatcaactatccgttatttttaccaaaca 167  Q
    ||||||||||||||| ||||||||||||||||||    
T  1265259 tagtttatcaactattcgttatttttaccaaaca 1265226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 19947704 - 19947655
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| ||||||  |||||| ||||||||||||||| |||||||    
T  19947704 ctatcagctagcttatcagttatccgctatttttaccaaacagagcctta 19947655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 37089029 - 37089078
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||| ||| |||||| ||||||| ||||||||||||||| |||||||    
T  37089029 ctatcagttagcttatcagctatccgctatttttaccaaacagagcctta 37089078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 46318090 - 46318045
Alignment:
Q  90 gccatcaactataaactatcagccatcaactataaactatcagcta 135  Q
    |||||||||||||||||||||| ||||| |||||| |||| |||||    
T  46318090 gccatcaactataaactatcagtcatcagctataagctataagcta 46318045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 32025631 - 32025583
Alignment:
Q  119 ctataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||||| ||||||||||| |||| | ||||||| |||||||||||||||    
T  32025631 ctataagctatcagctagcttataagctatccgctatttttaccaaaca 32025583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 32981929 - 32981845
Alignment:
Q  92 catcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 176  Q
    ||||| |||||| ||||||||||| | |||||| ||||||||||  ||||||   ||||  ||||||||||||||| | ||||||    
T  32981929 catcagctataagctatcagccataagctataagctatcagctaacttatcagtcatccactatttttaccaaacagaaccttaa 32981845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 45344426 - 45344378
Alignment:
Q  127 tatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    |||||||||  |||||| ||||||| ||||||||||||||| |||||||    
T  45344426 tatcagctaacttatcagctatccgctatttttaccaaacagagcctta 45344378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 52165460 - 52165408
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaac 178  Q
    ||||||| ||| |||| | ||||||| ||||||||||||||| ||||||||||    
T  52165460 ctatcagttagcttataagctatccgctatttttaccaaacagagccttaaac 52165408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 52867564 - 52867516
Alignment:
Q  119 ctataaactatcagctagtttatcaactatccgttatttttaccaaaca 167  Q
    |||||| ||||||||||| |||| | ||||||| |||||||||||||||    
T  52867564 ctataagctatcagctagcttataagctatccgctatttttaccaaaca 52867516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 54541421 - 54541381
Alignment:
Q  139 tatcaactatccgttatttttaccaaacaaagccttaaaca 179  Q
    ||||| ||||||||||||||||||||||| ||||| |||||    
T  54541421 tatcagctatccgttatttttaccaaacagagcctaaaaca 54541381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 192804 - 192880
Alignment:
Q  96 aactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||||||||| || | |||||| ||||||||||| |||| | ||||||  ||||||||| ||||||||||    
T  192804 aactataaactatcagctataagctataagctatcagctagcttataagctatccactatttttacaaaacaaagcc 192880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 129561 - 129503
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  129561 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 129503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 5181 - 5262
Alignment:
Q  92 catcaactataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||| |||| | ||||||| | ||| |||||| ||||||||||| |||||| ||| ||| ||||||||||||||| |||||    
T  5181 catcagctatcagctatcagtcgtcagctataagctatcagctagcttatcagctaaccgctatttttaccaaacagagcct 5262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 28410 - 28361
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  28410 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 28361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 92910 - 92842
Alignment:
Q  105 ctatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    |||| ||| |||| ||| |||||||||||||  |||||| ||||||| ||||||||||||||| |||||    
T  92910 ctataagctatcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaacagagcct 92842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 9410 - 9363
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  9410 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 9363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 25664 - 25711
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 173  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  25664 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 25711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 7797 - 7843
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  7797 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 7843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 22266 - 22220
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||| |||||| |||||| ||||||||||||||||||||||| ||||    
T  22266 ctataagctagcttatcagctatccgttatttttaccaaacagagcc 22220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 11829 - 11783
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  11829 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 11783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 72138 - 72064
Alignment:
Q  98 ctataaactatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    |||||| ||||||| ||||| |||||| |||||| |||  ||||||  |||||| ||||||||||||||| ||||    
T  72138 ctataagctatcagtcatcagctataagctatcaactaacttatcagttatccgctatttttaccaaacatagcc 72064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 41109 - 41063
Alignment:
Q  126 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 172  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  41109 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 41063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 6157 - 6218
Alignment:
Q  114 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 175  Q
    |||| ||| ||||||||| |||  |||||| ||||||| ||||||||||||||| |||||||    
T  6157 atcagctaaaaactatcaactaacttatcagctatccgctatttttaccaaacagagcctta 6218  T

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