View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19863_low_29 (Length: 266)
Name: NF19863_low_29
Description: NF19863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19863_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 42884880 - 42884631
Alignment:
| Q |
1 |
attgtaaggttaggcagaattctccaagtcaccggttccaaatctttagaggtaacacatgtcatgcacaccaatgcctgcaaaattctggttttaataa |
100 |
Q |
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| T |
42884880 |
attgtaaggttaggcagaattctccaagtcaccggttccaaatctttagaggtaacacatgtcatgcacaccaatgcctgcaaaattctggttttaataa |
42884781 |
T |
|
| Q |
101 |
aacacaagcaaatctgttaccaaatgcataaagt--tcttgtcagaactttattctgacaagcaacttaaagcaattcaattcaaactaagatagtataa |
198 |
Q |
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|||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42884780 |
aacacaagcaaatctgttaccaaatgcataaaataagatattcagaactttattctgacaagcaacttaaagcaattcaattcaaactaagatagtataa |
42884681 |
T |
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| Q |
199 |
attaaatcaattgtgaaaagtgatatcaagcatggaattggtgcagatac |
248 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
42884680 |
attaaatcaattgtgaaaagtgatatcaagcatgaaattggtgcagatac |
42884631 |
T |
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