View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19864_low_4 (Length: 231)
Name: NF19864_low_4
Description: NF19864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19864_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 8322572 - 8322723
Alignment:
| Q |
24 |
ttagatgcataatctcgtatagtgtggcattaagtttgcattaataatatggaataactgtgcaaacaaaaatctcatgtagtgaaacattttggcctac |
123 |
Q |
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| T |
8322572 |
ttagatgcataatctcgtataatgtggcattaagtttgcattaataatatggaataactgtgcaaacaaaaatctcatgtagtgaaacattttggcctac |
8322671 |
T |
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| Q |
124 |
aataaacaattaacattaatatgtaagaaaaattattgtttaacgttgaaac |
175 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8322672 |
aataatcaattaacattaatatgtaagaaaaattattgtttaacgttgaaac |
8322723 |
T |
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