View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19867_low_6 (Length: 260)

Name: NF19867_low_6
Description: NF19867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19867_low_6
NF19867_low_6
[»] chr8 (51 HSPs)
chr8 (37-260)||(5866153-5866376)
chr8 (34-260)||(17140932-17141158)
chr8 (34-260)||(21491011-21491237)
chr8 (34-260)||(21249400-21249626)
chr8 (34-260)||(21255238-21255464)
chr8 (21-260)||(26355576-26355816)
chr8 (32-183)||(38855205-38855358)
chr8 (32-258)||(6520382-6520610)
chr8 (21-183)||(23760798-23760962)
chr8 (32-183)||(21285611-21285765)
chr8 (33-184)||(983357-983512)
chr8 (21-183)||(21673707-21673871)
chr8 (22-133)||(22626740-22626850)
chr8 (37-258)||(20498581-20498806)
chr8 (36-117)||(17612132-17612213)
chr8 (36-119)||(13508105-13508188)
chr8 (36-119)||(13597637-13597720)
chr8 (34-116)||(31971273-31971354)
chr8 (22-116)||(7372782-7372876)
chr8 (22-116)||(18818432-18818526)
chr8 (22-116)||(23406383-23406477)
chr8 (22-116)||(22875069-22875162)
chr8 (22-95)||(18879276-18879348)
chr8 (22-141)||(6759262-6759381)
chr8 (22-116)||(16092365-16092459)
chr8 (37-116)||(16199668-16199746)
chr8 (22-116)||(20536212-20536306)
chr8 (34-116)||(21919023-21919105)
chr8 (22-116)||(28649067-28649161)
chr8 (22-88)||(21923980-21924045)
chr8 (37-116)||(45131021-45131098)
chr8 (37-90)||(21396029-21396082)
chr8 (37-90)||(21790522-21790575)
chr8 (22-67)||(26219718-26219763)
chr8 (32-67)||(1484413-1484448)
chr8 (32-67)||(4542489-4542524)
chr8 (32-67)||(5853408-5853443)
chr8 (32-67)||(14409560-14409595)
chr8 (32-67)||(16413432-16413467)
chr8 (32-67)||(19896276-19896311)
chr8 (32-67)||(20046311-20046346)
chr8 (32-67)||(20403238-20403273)
chr8 (32-67)||(22001764-22001799)
chr8 (32-67)||(26225363-26225398)
chr8 (37-184)||(37116366-37116518)
chr8 (32-67)||(45290811-45290846)
chr8 (34-67)||(15070571-15070604)
chr8 (37-90)||(21389499-21389552)
chr8 (37-90)||(21778825-21778878)
chr8 (32-64)||(4483292-4483324)
chr8 (37-89)||(24353039-24353091)
[»] chr7 (56 HSPs)
chr7 (22-260)||(28505177-28505415)
chr7 (34-260)||(34200802-34201028)
chr7 (34-260)||(11995906-11996132)
chr7 (34-260)||(15754765-15754992)
chr7 (37-186)||(16495421-16495570)
chr7 (21-260)||(18005649-18005891)
chr7 (21-259)||(44014181-44014418)
chr7 (32-260)||(67759-67989)
chr7 (21-258)||(16219595-16219835)
chr7 (21-183)||(811084-811249)
chr7 (32-183)||(47831821-47831975)
chr7 (33-183)||(16056343-16056495)
chr7 (32-183)||(22072927-22073083)
chr7 (33-133)||(2280125-2280225)
chr7 (22-133)||(3564370-3564481)
chr7 (156-260)||(15113084-15113188)
chr7 (156-260)||(15116621-15116725)
chr7 (36-119)||(10063838-10063921)
chr7 (37-252)||(20220073-20220290)
chr7 (22-116)||(38227485-38227578)
chr7 (22-95)||(12698835-12698907)
chr7 (36-117)||(19486766-19486847)
chr7 (37-116)||(13647344-13647423)
chr7 (32-116)||(18456436-18456519)
chr7 (22-116)||(9509193-9509287)
chr7 (33-202)||(14044761-14044935)
chr7 (33-202)||(14354791-14354965)
chr7 (32-186)||(17061909-17062066)
chr7 (34-116)||(26212012-26212094)
chr7 (34-95)||(16386292-16386353)
chr7 (32-116)||(48273403-48273487)
chr7 (32-67)||(456332-456367)
chr7 (32-67)||(3386344-3386379)
chr7 (32-67)||(11393403-11393438)
chr7 (32-67)||(11972507-11972542)
chr7 (40-116)||(12255814-12255892)
chr7 (32-67)||(13869357-13869392)
chr7 (32-67)||(14949238-14949273)
chr7 (32-67)||(15376829-15376864)
chr7 (32-67)||(16213695-16213730)
chr7 (32-67)||(16232531-16232566)
chr7 (32-67)||(16410070-16410105)
chr7 (32-67)||(18430723-18430758)
chr7 (32-67)||(18640283-18640318)
chr7 (32-67)||(20110567-20110602)
chr7 (32-67)||(20385239-20385274)
chr7 (32-67)||(21189711-21189746)
chr7 (32-67)||(24275182-24275217)
chr7 (32-67)||(24702249-24702284)
chr7 (32-67)||(24704699-24704734)
chr7 (32-67)||(32125502-32125537)
chr7 (37-116)||(40443410-40443488)
chr7 (32-67)||(41522928-41522963)
chr7 (32-67)||(41525390-41525425)
chr7 (33-67)||(15144109-15144143)
chr7 (34-95)||(10589055-10589115)
[»] chr5 (45 HSPs)
chr5 (34-260)||(19660714-19660940)
chr5 (21-260)||(22959411-22959650)
chr5 (21-260)||(21565545-21565787)
chr5 (22-260)||(19668902-19669142)
chr5 (32-260)||(21329373-21329604)
chr5 (33-181)||(26011990-26012141)
chr5 (32-183)||(21502109-21502263)
chr5 (37-119)||(36314596-36314678)
chr5 (37-260)||(20026816-20027043)
chr5 (22-116)||(21997557-21997651)
chr5 (37-116)||(22144068-22144147)
chr5 (139-186)||(36314672-36314719)
chr5 (22-95)||(8286888-8286960)
chr5 (34-116)||(21729087-21729169)
chr5 (34-116)||(21808412-21808494)
chr5 (34-116)||(22075035-22075117)
chr5 (22-116)||(23390519-23390613)
chr5 (22-116)||(25421536-25421630)
chr5 (22-116)||(24493573-24493666)
chr5 (22-95)||(24529224-24529296)
chr5 (36-117)||(40725871-40725952)
chr5 (31-95)||(1096480-1096543)
chr5 (22-116)||(9077956-9078050)
chr5 (22-104)||(13025315-13025396)
chr5 (22-104)||(13095499-13095580)
chr5 (37-90)||(37723922-37723975)
chr5 (32-67)||(264884-264919)
chr5 (32-67)||(2154730-2154765)
chr5 (32-67)||(10733056-10733091)
chr5 (32-67)||(10775792-10775827)
chr5 (32-67)||(11581315-11581350)
chr5 (32-67)||(20909023-20909058)
chr5 (32-67)||(20918064-20918099)
chr5 (32-67)||(23064522-23064557)
chr5 (38-116)||(25431414-25431492)
chr5 (32-67)||(29329945-29329980)
chr5 (32-67)||(29345991-29346026)
chr5 (32-67)||(29348464-29348499)
chr5 (32-67)||(29350937-29350972)
chr5 (32-67)||(36154896-36154931)
chr5 (32-67)||(38619445-38619480)
chr5 (32-67)||(39245147-39245182)
chr5 (32-67)||(39363395-39363430)
chr5 (33-67)||(20902125-20902159)
chr5 (37-89)||(21293020-21293071)
[»] scaffold0046 (4 HSPs)
scaffold0046 (34-260)||(11308-11534)
scaffold0046 (34-254)||(2013-2233)
scaffold0046 (22-116)||(28418-28512)
scaffold0046 (34-67)||(4568-4601)
[»] scaffold0261 (1 HSPs)
scaffold0261 (32-260)||(15675-15903)
[»] chr1 (43 HSPs)
chr1 (34-260)||(20918620-20918846)
chr1 (21-260)||(33681010-33681252)
chr1 (21-260)||(20248282-20248520)
chr1 (38-186)||(14295504-14295652)
chr1 (33-260)||(52927858-52928076)
chr1 (73-203)||(22130843-22130973)
chr1 (21-260)||(22237630-22237873)
chr1 (86-186)||(51130632-51130732)
chr1 (21-260)||(22921745-22921987)
chr1 (25-259)||(21754052-21754279)
chr1 (33-121)||(16758664-16758754)
chr1 (37-260)||(21861445-21861672)
chr1 (37-184)||(35261032-35261180)
chr1 (37-252)||(21896142-21896358)
chr1 (22-116)||(50210236-50210330)
chr1 (22-95)||(34509784-34509856)
chr1 (37-189)||(45574833-45574989)
chr1 (32-87)||(20454606-20454660)
chr1 (34-89)||(20847205-20847259)
chr1 (21-120)||(21161719-21161817)
chr1 (34-116)||(27250752-27250834)
chr1 (34-95)||(21026696-21026756)
chr1 (32-116)||(21840778-21840861)
chr1 (32-67)||(433023-433058)
chr1 (32-67)||(13212978-13213013)
chr1 (32-67)||(13988877-13988912)
chr1 (32-67)||(16361928-16361963)
chr1 (32-67)||(21342107-21342142)
chr1 (32-67)||(21346972-21347007)
chr1 (32-67)||(21707178-21707213)
chr1 (32-67)||(21711720-21711755)
chr1 (32-67)||(21923407-21923442)
chr1 (22-116)||(22532273-22532367)
chr1 (32-67)||(23593851-23593886)
chr1 (32-67)||(29298148-29298183)
chr1 (32-67)||(29776699-29776734)
chr1 (32-67)||(31612324-31612359)
chr1 (156-260)||(12271695-12271792)
chr1 (142-184)||(20636975-20637017)
chr1 (44-94)||(38801433-38801483)
chr1 (36-80)||(22123171-22123215)
chr1 (37-89)||(50614167-50614219)
chr1 (37-89)||(50621995-50622047)
[»] chr6 (45 HSPs)
chr6 (35-260)||(28496350-28496575)
chr6 (35-260)||(29808761-29808986)
chr6 (34-260)||(1561319-1561546)
chr6 (21-260)||(19652198-19652438)
chr6 (33-258)||(19668386-19668615)
chr6 (32-119)||(27333238-27333325)
chr6 (32-119)||(27393978-27394065)
chr6 (37-258)||(23019425-23019649)
chr6 (33-183)||(9098466-9098620)
chr6 (33-260)||(20109153-20109386)
chr6 (21-120)||(4185840-4185939)
chr6 (22-116)||(20076704-20076797)
chr6 (33-95)||(25644335-25644397)
chr6 (31-120)||(4186380-4186469)
chr6 (32-116)||(17287819-17287903)
chr6 (34-117)||(8227533-8227616)
chr6 (34-116)||(16496260-16496342)
chr6 (22-116)||(29060544-29060638)
chr6 (73-120)||(4668230-4668277)
chr6 (73-120)||(4675077-4675124)
chr6 (22-116)||(18409850-18409944)
chr6 (22-116)||(20638306-20638400)
chr6 (77-120)||(22080757-22080800)
chr6 (22-116)||(19303564-19303657)
chr6 (31-116)||(20360983-20361068)
chr6 (32-186)||(22782238-22782395)
chr6 (32-116)||(25656640-25656723)
chr6 (32-116)||(30676778-30676861)
chr6 (22-66)||(25629428-25629472)
chr6 (37-116)||(35245605-35245682)
chr6 (32-67)||(2291296-2291331)
chr6 (32-67)||(8055040-8055075)
chr6 (32-67)||(12742328-12742363)
chr6 (32-67)||(18334708-18334743)
chr6 (32-67)||(19005057-19005092)
chr6 (32-67)||(19859035-19859070)
chr6 (39-86)||(22831524-22831571)
chr6 (32-67)||(24422558-24422593)
chr6 (32-67)||(25714431-25714466)
chr6 (32-67)||(25754820-25754855)
chr6 (32-67)||(26924756-26924791)
chr6 (32-67)||(33861805-33861840)
chr6 (32-67)||(33864289-33864324)
chr6 (41-90)||(16920679-16920728)
chr6 (22-67)||(22780299-22780344)
[»] scaffold0175 (2 HSPs)
scaffold0175 (34-260)||(34139-34365)
scaffold0175 (31-67)||(286-322)
[»] chr4 (49 HSPs)
chr4 (34-260)||(15551833-15552058)
chr4 (56-260)||(16596686-16596890)
chr4 (21-260)||(12774010-12774242)
chr4 (21-260)||(8846359-8846617)
chr4 (37-260)||(13726-13953)
chr4 (33-251)||(12288094-12288316)
chr4 (33-260)||(43198428-43198661)
chr4 (32-183)||(39706242-39706395)
chr4 (33-116)||(52243217-52243302)
chr4 (31-116)||(16377546-16377629)
chr4 (22-116)||(7088881-7088975)
chr4 (22-116)||(7798778-7798872)
chr4 (22-116)||(52873390-52873484)
chr4 (34-116)||(12902773-12902855)
chr4 (22-116)||(16270259-16270352)
chr4 (34-95)||(3096309-3096369)
chr4 (22-116)||(7893707-7893801)
chr4 (22-116)||(6899895-6899988)
chr4 (37-90)||(17046506-17046559)
chr4 (32-116)||(19618240-19618323)
chr4 (22-67)||(22636439-22636484)
chr4 (34-95)||(23374404-23374464)
chr4 (32-67)||(12423-12458)
chr4 (32-67)||(1837625-1837660)
chr4 (32-67)||(7641298-7641333)
chr4 (32-67)||(12610961-12610996)
chr4 (32-67)||(14280327-14280362)
chr4 (32-67)||(15118468-15118503)
chr4 (32-67)||(15355441-15355476)
chr4 (32-67)||(18215390-18215425)
chr4 (32-67)||(18239535-18239570)
chr4 (32-67)||(19242710-19242745)
chr4 (32-67)||(23803381-23803416)
chr4 (22-116)||(44052833-44052927)
chr4 (32-67)||(44102225-44102260)
chr4 (32-67)||(44615299-44615334)
chr4 (32-67)||(44773203-44773238)
chr4 (32-67)||(44928996-44929031)
chr4 (32-67)||(50222455-50222490)
chr4 (32-67)||(51463984-51464019)
chr4 (32-67)||(52312521-52312556)
chr4 (37-87)||(6190481-6190531)
chr4 (22-116)||(16239993-16240086)
chr4 (32-65)||(3515018-3515051)
chr4 (32-116)||(54798777-54798861)
chr4 (35-67)||(8574939-8574971)
chr4 (31-67)||(14038661-14038697)
chr4 (152-184)||(15099485-15099517)
chr4 (152-184)||(15190452-15190484)
[»] chr2 (46 HSPs)
chr2 (34-239)||(23071849-23072054)
chr2 (21-260)||(25175853-25176095)
chr2 (23-183)||(28405981-28406144)
chr2 (22-260)||(22134093-22134323)
chr2 (32-181)||(7679599-7679750)
chr2 (33-184)||(18786854-18787009)
chr2 (36-119)||(19671848-19671931)
chr2 (156-260)||(22459437-22459541)
chr2 (33-116)||(23708642-23708725)
chr2 (34-116)||(38138-38219)
chr2 (32-116)||(22105423-22105507)
chr2 (32-95)||(298859-298922)
chr2 (22-116)||(23060517-23060611)
chr2 (22-95)||(23285869-23285941)
chr2 (22-116)||(23076446-23076540)
chr2 (37-116)||(7756-7835)
chr2 (22-116)||(22731257-22731351)
chr2 (22-95)||(8946661-8946733)
chr2 (37-90)||(20309127-20309180)
chr2 (22-67)||(22337119-22337164)
chr2 (22-67)||(23040261-23040306)
chr2 (32-67)||(571408-571443)
chr2 (32-67)||(6726006-6726041)
chr2 (32-67)||(18808954-18808989)
chr2 (32-67)||(21155176-21155211)
chr2 (32-67)||(22738251-22738286)
chr2 (37-96)||(23103439-23103497)
chr2 (32-67)||(23130873-23130908)
chr2 (32-67)||(23133340-23133375)
chr2 (32-67)||(23135601-23135636)
chr2 (34-116)||(23654409-23654491)
chr2 (22-133)||(23660027-23660137)
chr2 (32-67)||(23709648-23709683)
chr2 (32-67)||(23712129-23712164)
chr2 (32-67)||(24367785-24367820)
chr2 (32-67)||(24643066-24643101)
chr2 (32-67)||(26505390-26505425)
chr2 (32-67)||(26507868-26507903)
chr2 (32-67)||(28577110-28577145)
chr2 (32-67)||(32215037-32215072)
chr2 (32-67)||(34402638-34402673)
chr2 (32-67)||(38967385-38967420)
chr2 (32-67)||(39682324-39682359)
chr2 (32-67)||(43137310-43137345)
chr2 (32-67)||(45029970-45030005)
chr2 (37-116)||(23207296-23207377)
[»] scaffold0556 (2 HSPs)
scaffold0556 (31-260)||(6825-7054)
scaffold0556 (140-183)||(8140-8183)
[»] scaffold0161 (1 HSPs)
scaffold0161 (87-260)||(2321-2494)
[»] scaffold0218 (2 HSPs)
scaffold0218 (73-260)||(29156-29346)
scaffold0218 (33-260)||(7952-8180)
[»] chr3 (66 HSPs)
chr3 (34-260)||(13210205-13210432)
chr3 (21-246)||(12174152-12174377)
chr3 (21-260)||(16097331-16097573)
chr3 (21-260)||(16103783-16104024)
chr3 (25-260)||(32307684-32307912)
chr3 (21-183)||(15470927-15471092)
chr3 (21-260)||(9512923-9513152)
chr3 (21-260)||(9520898-9521127)
chr3 (133-260)||(49389506-49389633)
chr3 (32-183)||(14234501-14234655)
chr3 (21-260)||(49667961-49668194)
chr3 (31-260)||(1644560-1644781)
chr3 (25-116)||(14572596-14572686)
chr3 (36-119)||(23274705-23274788)
chr3 (180-260)||(12934188-12934268)
chr3 (32-116)||(53301574-53301658)
chr3 (21-116)||(14576856-14576950)
chr3 (36-119)||(24340743-24340826)
chr3 (37-133)||(52523733-52523831)
chr3 (32-108)||(27165261-27165337)
chr3 (22-116)||(18438538-18438632)
chr3 (22-116)||(11424783-11424876)
chr3 (22-95)||(20698480-20698552)
chr3 (36-117)||(37642287-37642368)
chr3 (22-133)||(14972858-14972969)
chr3 (34-116)||(12399225-12399307)
chr3 (22-116)||(13442278-13442372)
chr3 (22-95)||(23083406-23083478)
chr3 (32-116)||(24153232-24153315)
chr3 (33-116)||(26686902-26686985)
chr3 (22-116)||(17487860-17487954)
chr3 (22-116)||(17499342-17499436)
chr3 (32-83)||(28194704-28194755)
chr3 (37-252)||(37251051-37251270)
chr3 (32-186)||(9707601-9707758)
chr3 (73-117)||(22147547-22147591)
chr3 (32-116)||(36166609-36166691)
chr3 (32-67)||(6469250-6469285)
chr3 (32-67)||(7781463-7781498)
chr3 (32-67)||(8499529-8499564)
chr3 (32-67)||(10247839-10247874)
chr3 (32-67)||(10556996-10557031)
chr3 (32-67)||(12567571-12567606)
chr3 (32-67)||(13544036-13544071)
chr3 (32-67)||(15412440-15412475)
chr3 (32-67)||(15977526-15977561)
chr3 (32-67)||(16282927-16282962)
chr3 (32-67)||(17463189-17463224)
chr3 (32-67)||(17672637-17672672)
chr3 (32-67)||(17737247-17737282)
chr3 (32-67)||(21618460-21618495)
chr3 (32-67)||(28848727-28848762)
chr3 (32-67)||(29172699-29172734)
chr3 (32-67)||(34159337-34159372)
chr3 (32-67)||(38962007-38962042)
chr3 (32-67)||(41123901-41123936)
chr3 (36-95)||(42386428-42386486)
chr3 (32-67)||(45577954-45577989)
chr3 (32-67)||(45607023-45607058)
chr3 (32-67)||(50242833-50242868)
chr3 (32-67)||(55476502-55476537)
chr3 (32-67)||(55500953-55500988)
chr3 (31-116)||(43840945-43841030)
chr3 (152-184)||(1465363-1465395)
chr3 (37-89)||(22110402-22110454)
chr3 (37-89)||(43925977-43926029)
[»] scaffold0125 (1 HSPs)
scaffold0125 (21-260)||(45668-45910)
[»] scaffold0010 (1 HSPs)
scaffold0010 (21-260)||(129908-130150)
[»] scaffold0555 (1 HSPs)
scaffold0555 (33-260)||(10417-10647)
[»] scaffold0001 (2 HSPs)
scaffold0001 (19-260)||(160685-160928)
scaffold0001 (32-67)||(501095-501130)
[»] scaffold0184 (1 HSPs)
scaffold0184 (37-186)||(1022-1171)
[»] scaffold1984 (1 HSPs)
scaffold1984 (21-260)||(132-373)
[»] scaffold0037 (1 HSPs)
scaffold0037 (21-260)||(22550-22788)
[»] scaffold1765 (1 HSPs)
scaffold1765 (32-260)||(1096-1327)
[»] scaffold0023 (7 HSPs)
scaffold0023 (21-260)||(100377-100619)
scaffold0023 (21-260)||(40050-40292)
scaffold0023 (21-99)||(101502-101580)
scaffold0023 (34-91)||(119891-119948)
scaffold0023 (32-67)||(17556-17591)
scaffold0023 (32-67)||(44465-44500)
scaffold0023 (32-67)||(94422-94457)
[»] scaffold0102 (1 HSPs)
scaffold0102 (21-260)||(19267-19509)
[»] scaffold0621 (2 HSPs)
scaffold0621 (22-183)||(6539-6702)
scaffold0621 (33-260)||(8481-8714)
[»] scaffold0476 (1 HSPs)
scaffold0476 (22-260)||(12770-13011)
[»] scaffold0028 (5 HSPs)
scaffold0028 (22-260)||(62202-62440)
scaffold0028 (21-260)||(132661-132896)
scaffold0028 (32-67)||(136691-136726)
scaffold0028 (32-67)||(139160-139195)
scaffold0028 (32-67)||(144098-144133)
[»] scaffold0008 (1 HSPs)
scaffold0008 (21-260)||(14573-14815)
[»] scaffold0243 (1 HSPs)
scaffold0243 (32-258)||(6001-6230)
[»] scaffold0150 (1 HSPs)
scaffold0150 (21-260)||(32101-32336)
[»] scaffold0034 (1 HSPs)
scaffold0034 (33-260)||(32551-32780)
[»] scaffold0278 (1 HSPs)
scaffold0278 (31-183)||(5656-5810)
[»] scaffold0207 (1 HSPs)
scaffold0207 (21-260)||(2521-2763)
[»] scaffold0075 (1 HSPs)
scaffold0075 (37-260)||(53424-53651)
[»] scaffold0078 (1 HSPs)
scaffold0078 (33-260)||(10542-10772)
[»] scaffold0333 (2 HSPs)
scaffold0333 (32-183)||(6625-6779)
scaffold0333 (32-183)||(14005-14159)
[»] scaffold0530 (1 HSPs)
scaffold0530 (32-183)||(987-1141)
[»] scaffold0100 (1 HSPs)
scaffold0100 (21-120)||(23902-24001)
[»] scaffold0138 (1 HSPs)
scaffold0138 (21-183)||(12942-13107)
[»] scaffold0628 (2 HSPs)
scaffold0628 (21-133)||(2812-2924)
scaffold0628 (206-260)||(2680-2734)
[»] scaffold0211 (2 HSPs)
scaffold0211 (172-260)||(28687-28775)
scaffold0211 (21-102)||(28806-28888)
[»] scaffold0020 (1 HSPs)
scaffold0020 (32-120)||(15796-15884)
[»] scaffold2014 (1 HSPs)
scaffold2014 (37-121)||(1051-1135)
[»] scaffold0540 (1 HSPs)
scaffold0540 (22-116)||(3174-3267)
[»] scaffold0461 (1 HSPs)
scaffold0461 (36-117)||(11482-11563)
[»] scaffold0124 (1 HSPs)
scaffold0124 (36-117)||(38278-38359)
[»] scaffold0908 (1 HSPs)
scaffold0908 (22-133)||(3192-3303)
[»] scaffold0413 (1 HSPs)
scaffold0413 (37-260)||(12587-12813)
[»] scaffold0141 (1 HSPs)
scaffold0141 (31-116)||(39490-39574)
[»] scaffold0049 (1 HSPs)
scaffold0049 (31-116)||(75238-75322)
[»] scaffold0357 (2 HSPs)
scaffold0357 (33-133)||(16106-16206)
scaffold0357 (37-133)||(13147-13243)
[»] scaffold0165 (1 HSPs)
scaffold0165 (33-133)||(27755-27855)
[»] scaffold0074 (1 HSPs)
scaffold0074 (32-116)||(38725-38809)
[»] scaffold0003 (2 HSPs)
scaffold0003 (33-116)||(339972-340053)
scaffold0003 (32-67)||(158566-158601)
[»] scaffold0507 (1 HSPs)
scaffold0507 (39-260)||(7934-8161)
[»] scaffold0247 (1 HSPs)
scaffold0247 (36-119)||(18047-18130)
[»] scaffold0122 (2 HSPs)
scaffold0122 (31-133)||(26071-26173)
scaffold0122 (32-116)||(44730-44814)
[»] scaffold1257 (1 HSPs)
scaffold1257 (76-260)||(2094-2281)
[»] scaffold0427 (1 HSPs)
scaffold0427 (34-116)||(13513-13594)
[»] scaffold0120 (4 HSPs)
scaffold0120 (22-116)||(32980-33073)
scaffold0120 (22-116)||(45932-46025)
scaffold0120 (22-95)||(16117-16189)
scaffold0120 (22-67)||(17401-17446)
[»] scaffold0121 (1 HSPs)
scaffold0121 (22-116)||(8556-8646)
[»] scaffold0056 (1 HSPs)
scaffold0056 (22-95)||(17262-17334)
[»] scaffold0026 (2 HSPs)
scaffold0026 (31-116)||(25909-25993)
scaffold0026 (22-116)||(39862-39955)
[»] scaffold0193 (1 HSPs)
scaffold0193 (22-116)||(13215-13309)
[»] scaffold0016 (2 HSPs)
scaffold0016 (22-116)||(1855-1949)
scaffold0016 (134-186)||(207470-207522)
[»] scaffold0011 (2 HSPs)
scaffold0011 (22-116)||(51917-52011)
scaffold0011 (34-95)||(168023-168083)
[»] scaffold0145 (3 HSPs)
scaffold0145 (22-116)||(32946-33039)
scaffold0145 (22-116)||(38765-38858)
scaffold0145 (32-67)||(9760-9795)
[»] scaffold0114 (1 HSPs)
scaffold0114 (34-116)||(15487-15568)
[»] scaffold0113 (1 HSPs)
scaffold0113 (34-116)||(32083-32163)
[»] scaffold0080 (1 HSPs)
scaffold0080 (22-116)||(39917-40010)
[»] scaffold0032 (1 HSPs)
scaffold0032 (37-110)||(51601-51672)
[»] scaffold0021 (2 HSPs)
scaffold0021 (37-90)||(174785-174838)
scaffold0021 (22-88)||(121770-121835)
[»] scaffold1137 (1 HSPs)
scaffold1137 (172-260)||(2179-2267)
[»] scaffold0106 (2 HSPs)
scaffold0106 (37-116)||(1308-1385)
scaffold0106 (37-90)||(7285-7338)
[»] scaffold0475 (1 HSPs)
scaffold0475 (73-120)||(9133-9180)
[»] scaffold0456 (1 HSPs)
scaffold0456 (34-116)||(10448-10528)
[»] scaffold0403 (1 HSPs)
scaffold0403 (34-116)||(4865-4947)
[»] scaffold0123 (1 HSPs)
scaffold0123 (33-184)||(25121-25276)
[»] scaffold0042 (1 HSPs)
scaffold0042 (36-95)||(24348-24406)
[»] scaffold1842 (1 HSPs)
scaffold1842 (34-95)||(1093-1153)
[»] scaffold0647 (1 HSPs)
scaffold0647 (22-67)||(6196-6241)
[»] scaffold0454 (1 HSPs)
scaffold0454 (32-116)||(10784-10867)
[»] scaffold0358 (1 HSPs)
scaffold0358 (34-95)||(4728-4788)
[»] scaffold0351 (1 HSPs)
scaffold0351 (37-90)||(16301-16354)
[»] scaffold0088 (1 HSPs)
scaffold0088 (36-116)||(20928-21009)
[»] scaffold0761 (1 HSPs)
scaffold0761 (32-67)||(4308-4343)
[»] scaffold0716 (1 HSPs)
scaffold0716 (32-67)||(4705-4740)
[»] scaffold0444 (1 HSPs)
scaffold0444 (32-67)||(13403-13438)
[»] scaffold0363 (1 HSPs)
scaffold0363 (32-67)||(9253-9288)
[»] scaffold0292 (2 HSPs)
scaffold0292 (22-116)||(3474-3568)
scaffold0292 (36-116)||(361-440)
[»] scaffold0254 (1 HSPs)
scaffold0254 (32-67)||(20758-20793)
[»] scaffold0231 (1 HSPs)
scaffold0231 (32-67)||(22897-22932)
[»] scaffold0217 (1 HSPs)
scaffold0217 (22-116)||(16623-16717)
[»] scaffold0142 (1 HSPs)
scaffold0142 (32-67)||(16795-16830)
[»] scaffold0134 (1 HSPs)
scaffold0134 (32-67)||(37832-37867)
[»] scaffold0022 (2 HSPs)
scaffold0022 (32-67)||(116441-116476)
scaffold0022 (37-184)||(128921-129072)
[»] scaffold0639 (1 HSPs)
scaffold0639 (22-67)||(8483-8528)
[»] scaffold0394 (1 HSPs)
scaffold0394 (32-65)||(12075-12108)
[»] scaffold0007 (1 HSPs)
scaffold0007 (34-67)||(161206-161239)
[»] scaffold0718 (1 HSPs)
scaffold0718 (37-116)||(5153-5230)
[»] scaffold0598 (1 HSPs)
scaffold0598 (37-116)||(1074-1151)
[»] scaffold0149 (1 HSPs)
scaffold0149 (35-67)||(29946-29978)


Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 37 - 260
Target Start/End: Complemental strand, 5866376 - 5866153
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaactca 136  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  5866376 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaactca 5866277  T
Q  137 attatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaagtt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  5866276 attatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaacattaacagcaaggt 5866177  T
Q  237 aaacatcttagtttctaacctcta 260  Q
    ||||| ||||||||||||||||||    
T  5866176 aaacaacttagtttctaacctcta 5866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 17140932 - 17141158
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| ||||    
T  17140932 caacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgacataataatatcgaatgtaaatcatcaac 17141031  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17141032 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaacattaacagcaa 17141131  T
Q  234 gttaaacatcttagtttctaacctcta 260  Q
    | |||||| ||||||||||||||||||    
T  17141132 ggtaaacaacttagtttctaacctcta 17141158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 21491011 - 21491237
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  21491011 caacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatattgaatgtaaatcaacaac 21491110  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  21491111 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataggcatcagtcttactggaacattaacagcaa 21491210  T
Q  234 gttaaacatcttagtttctaacctcta 260  Q
    | |||||| ||||||||||||||||||    
T  21491211 ggtaaacaacttagtttctaacctcta 21491237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 21249400 - 21249626
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccaccc-agcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa 132  Q
    |||||||||||||||||| |||||||||||||||  |    ||||||||| |||||||||||  |||||||||||||||||||||||| ||||||| |||    
T  21249400 caacttagaccgactcatgcagcttagttaaataaaaaaatagcaacataagcagtatgcaattcatcatgatataataatatcgaatgtaaatcaacaa 21249499  T
Q  133 ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||    
T  21249500 ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttagtgagacattaacagca 21249599  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
     | | |||| ||||||| ||||||||||    
T  21249600 gggt-aacaacttagttcctaacctcta 21249626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 21255238 - 21255464
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccaccc-agcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa 132  Q
    |||||||||||||||||| |||||||||||||||  |    ||||||||| |||||||||||  |||||||||||||||||||||||| ||||||| |||    
T  21255238 caacttagaccgactcatgcagcttagttaaataaaaaaatagcaacataagcagtatgcaattcatcatgatataataatatcgaatgtaaatcaacaa 21255337  T
Q  133 ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||    
T  21255338 ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttagtgagacattaacagca 21255437  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
     | | |||| ||||||| ||||||||||    
T  21255438 gggt-aacaacttagttcctaacctcta 21255464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 26355816 - 26355576
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| | ||  || |||||||||||||||||||| ||||| ||||||| ||||||||||    
T  26355816 acatcatcatcatcaacttagaccgactcatgcagcttagttaaacaacaaacaacaacataggcagtatgcaaatcatcacgatataacaatatcgaat 26355717  T
Q  121 ataa--atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactg 218  Q
      ||  | || || ||||   ||||| | ||   ||| ||||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||     
T  26355716 gcaatcaacaacatctcagccatcaa-catattccatttaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttacta 26355618  T
Q  219 gaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||| |||||  ||| |||||| ||||||||||||||||||    
T  26355617 gaacaataacaaaaagataaacaacttagtttctaacctcta 26355576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 38855358 - 38855205
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||  |||||| ||    
T  38855358 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaaca 38855259  T
Q  132 a---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
    |   ||||| |||| ||| ||| |||| |||||||||||||||||||||||||||    
T  38855258 acatctcaaatatc-aacataattcatataatgtatatacaattatataacatta 38855205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 258
Target Start/End: Original strand, 6520382 - 6520610
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||  || ||| ||    
T  6520382 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatca 6520481  T
Q  132 actcaattatca--aacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaaca 229  Q
    ||   || | ||  ||| ||| ||||||||||||||||||||||||||||||||  |  |||||||  | |||    |||| ||||||| ||||  ||||    
T  6520482 acatcataaacatcaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaaca 6520581  T
Q  230 gcaagttaaacatcttagtttctaacctc 258  Q
    ||||| |||| | ||||||||||||||||    
T  6520582 gcaagataaataacttagtttctaacctc 6520610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 21 - 183
Target Start/End: Complemental strand, 23760962 - 23760798
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||| ||| ||||||||||||| ||||| ||||    
T  23760962 acatcatcatcttcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgtaaatcatcatgatataacaatattgaat 23760863  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
      |||||| |||   ||||| |||| ||| ||| |||| ||||||||||||||||||||| |||||    
T  23760862 tcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataccatta 23760798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 21285611 - 21285765
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| |||||| |||||||| ||  || |||||||||||||||||||| || |||||||||| |||||| |||  |||||| ||    
T  21285611 atcaacttagaccgactcatgcagctttgttaaataacaaacaacaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaaatcaaca 21285710  T
Q  132 a---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
    |   |||||  ||||||| ||  |||||||||||||||||||||||||| |||||    
T  21285711 acatctcaaacatcaaacatagttcatgtaatgtatatacaattatatatcatta 21285765  T

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Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 983512 - 983357
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagc 130  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||| |  ||||||||||| ||| || |||  || ||| |    
T  983512 tcaacttagaccgactcatgcagcttagttaaataacaatcagcaacataggcagtatgcaaacaagttcatgatataacaatctcaaatgcaattcaac 983413  T
Q  131 aac-tca-attatcaaacttaagtcatgtaatgtatatacaattatataacattat 184  Q
    ||| ||| |  ||||||| ||| ||||||||||||||||||  |||||||||||||    
T  983412 aacatcacaacatcaaacataattcatgtaatgtatatacagctatataacattat 983357  T

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Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 183
Target Start/End: Original strand, 21673707 - 21673871
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    |||| |||| ||||||||||||||||||||| || | |||||||||| ||  || ||||||||||| |||||||| ||||||||||||| ||||||||||    
T  21673707 acatgatcatcatcaacttagaccgactcatgcatcatagttaaataacaaacaacaacataggcattatgcaaatcatcatgatataacaatatcgaat 21673806  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
      |||||| |||   ||||| |||| ||  ||| | || ||||||||||||||||||||| |||||    
T  21673807 gcaaatcaacaacatctcaaatatc-aatataatttatttaatgtatatacaattatataccatta 21673871  T

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Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 22626740 - 22626850
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaata 121  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| |||| || ||||| ||||||||||| ||||    
T  22626740 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaacaacatgacataataatatcaaata 22626838  T
Q  122 taaatcagcaac 133  Q
     |||||| ||||    
T  22626839 caaatcaacaac 22626850  T

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Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 37 - 258
Target Start/End: Original strand, 20498581 - 20498806
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac--- 133  Q
    ||||||||||||||| || |||||||||  | ||  ||||||||||||||||||| |||  | |||||||||| |||||| |||  || ||| ||||       
T  20498581 cttagaccgactcatgcaacttagttaataaacaaacagcaacataggcagtatgtaaaatagcatgatataacaatatcaaatgcaagtcatcaacatc 20498680  T
Q  134 tcaattat-caaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    ||||  || || |  ||| ||| ||||||||||||||||||||| |||||||||  ||||| || |||||  |||||||||||| | ||||| |||| ||    
T  20498681 tcaaacattcatatataattcaagtaatgtatatacaattatatcacattataaacaacatcaaatcatatacatcagtcttaccgaaacatcaacatca 20498780  T
Q  233 agttaaacatcttagtttctaacctc 258  Q
    || |||||| |||||||||| |||||    
T  20498781 agataaacaacttagtttcttacctc 20498806  T

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Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 17612213 - 17612132
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcg 117  Q
    |||||||| ||||||| |||||||||||| || ||  || |||||||||||||||||||| |||||||||||||||||||||    
T  17612213 acttagactgactcatgcagcttagttaattaacaatcaacaacataggcagtatgcaaaacatcatgatataataatatcg 17612132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 13508188 - 13508105
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaa 119  Q
    |||||||| ||||||| |||||||||||| || ||  |||||||||||||| |||||| | |||||||||||||||||||||||    
T  13508188 acttagactgactcatgcagcttagttaattaacaatcagcaacataggcaatatgcacaacatcatgatataataatatcgaa 13508105  T

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Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 13597720 - 13597637
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaa 119  Q
    |||||||| ||||||| |||||||||||| || ||  |||||||||| |||| ||||||| |||||||||||||||||||||||    
T  13597720 acttagactgactcatgcagcttagttaattaacaatcagcaacataagcagaatgcaaaacatcatgatataataatatcgaa 13597637  T

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Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 31971273 - 31971354
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| |||| || ||||| |||||||||||    
T  31971273 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaacaacatgacataataatatc 31971354  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 7372782 - 7372876
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  7372782 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatc 7372876  T

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Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 18818526 - 18818432
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  18818526 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatc 18818432  T

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Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 23406383 - 23406477
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  23406383 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacaacatgacataataatatc 23406477  T

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Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 22875069 - 22875162
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  |||||| |||||||||||||| ||||||||||||||| ||  |||||||| ||||||||| |||| || ||||| |||||||||||    
T  22875069 catcatcttcatcaatttagaccgactcatgcagcttagttaaatagca-gcagcaacacaggcagtatacaaaacaacatgacataataatatc 22875162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 18879348 - 18879276
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  18879348 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa 18879276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 6759262 - 6759381
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatcgaat 120  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||| ||||||||| | ||| || ||||| ||||||||||| |||    
T  6759262 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacacaggcagtatacaaaaacaacatgacataataatatcaaat 6759360  T
Q  121 ataaatcagcaactcaattat 141  Q
      || ||| || |||||||||    
T  6759361 gcaagtcaacatctcaattat 6759381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 16092459 - 16092365
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||| ||||||||| | ||| || ||||| |||||||||||    
T  16092459 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacacaggcagtatacaaaaacagcatgacataataatatc 16092365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 16199746 - 16199668
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||| ||||||||||||||| ||  ||||||||||| |||||| |||| || ||||| |||||||||||    
T  16199746 cttagaccgactcatgcagcttagttaaataacaaacagcaacatagacagtattcaaa-caacatgacataataatatc 16199668  T

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Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 20536212 - 20536306
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  ||| |||||||||||||| | ||| || ||||| |||||||||||    
T  20536212 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagaaacataggcagtatacaaaaacagcatgacataataatatc 20536306  T

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Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 21919105 - 21919023
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  21919105 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatc 21919023  T

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Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 28649161 - 28649067
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||   ||||||||||||||||| | ||| || ||||| |||||||||||    
T  28649161 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-aaagcaacataggcagtatacgaaaacagcatgacataataatatc 28649067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 21924045 - 21923980
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagt 88  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||    
T  21924045 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagt 21923980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 45131098 - 45131021
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||||||||||  |||| || ||||| |||||||||||    
T  45131098 cttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtaaacaaa-cagcatgacataataatatc 45131021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 21396082 - 21396029
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||||||||||| ||||||||||||||| ||  || |||||||||||||||    
T  21396082 cttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 21396029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 21790575 - 21790522
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||||||||||| ||||||||||||||| ||  || |||||||||||||||    
T  21790575 cttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 21790522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 26219718 - 26219763
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaata 67  Q
    ||||||||  |||||||||||||||||||| |||||||||||||||    
T  26219718 catcatcataatcaacttagaccgactcatgcagcttagttaaata 26219763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 1484413 - 1484448
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  1484413 atcaacttagaccgactcatgcagcttagttaaata 1484448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 4542524 - 4542489
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  4542524 atcaacttagaccgactcatgcagcttagttaaata 4542489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 5853443 - 5853408
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  5853443 atcaacttagaccgactcatgcagcttagttaaata 5853408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 14409595 - 14409560
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  14409595 atcaacttagaccgactcatgcagcttagttaaata 14409560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 16413467 - 16413432
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  16413467 atcaacttagaccgactcatgcagcttagttaaata 16413432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 19896276 - 19896311
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  19896276 atcaacttagaccgactcatgcagcttagttaaata 19896311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 20046346 - 20046311
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  20046346 atcaacttagaccgactcatgcagcttagttaaata 20046311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 20403238 - 20403273
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  20403238 atcaacttagaccgactcatgcagcttagttaaata 20403273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 22001764 - 22001799
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  22001764 atcaacttagaccgactcatgcagcttagttaaata 22001799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 26225398 - 26225363
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  26225398 atcaacttagaccgactcatgcagcttagttaaata 26225363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 37116366 - 37116518
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagcaa-- 132  Q
    ||||||||||||||| ||||||||||||  | ||  |||||||||||||||||   ||| ||  ||||||||||| |||||| |||  |||||| |||      
T  37116366 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtacataaaacagttcatgatataacaatatcaaatgcaaatcaacaaca 37116465  T
Q  133 -ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattat 184  Q
     |||||  |||| |  ||| |||||||||| |||||||| ||||| |||||||    
T  37116466 tctcaaacatcatatataattcatgtaatgcatatacaaatatatcacattat 37116518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 45290846 - 45290811
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  45290846 atcaacttagaccgactcatgcagcttagttaaata 45290811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 15070571 - 15070604
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||| |||||||||||||||    
T  15070571 caacttagaccgactcatgcagcttagttaaata 15070604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 21389552 - 21389499
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||||||||||| ||||||||||||||| ||  || ||||||||| |||||    
T  21389552 cttagaccgactcatgcagcttagttaaataacaaacaacaacataggtagtat 21389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 21778878 - 21778825
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||||||||||| ||||||||||||||| ||  || ||||||||| |||||    
T  21778878 cttagaccgactcatgcagcttagttaaataacaaacaacaacataggtagtat 21778825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 4483292 - 4483324
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaa 64  Q
    |||||||||||||||||||| ||||||||||||    
T  4483292 atcaacttagaccgactcatgcagcttagttaa 4483324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 24353039 - 24353091
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagta 89  Q
    ||||||||||||||| ||||||||||||  | ||  |||||||||||||||||    
T  24353039 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 24353091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 28505415 - 28505177
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaata 121  Q
    |||||||  ||||| ||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28505415 catcatcttcatcatcttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatcggata 28505316  T
Q  122 taaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaa 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28505315 taaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaa 28505216  T
Q  222 cattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||| ||| |||| |||||| ||||||||||||||||||    
T  28505215 cattgacaacaaggtaaacaacttagtttctaacctcta 28505177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 34200802 - 34201028
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  34200802 caacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaac 34200901  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  34200902 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactgggacattaacagcaa 34201001  T
Q  234 gttaaacatcttagtttctaacctcta 260  Q
    | |||||| ||||||||||||||||||    
T  34201002 ggtaaacaacttagtttctaacctcta 34201028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 34 - 260
Target Start/End: Complemental strand, 11996132 - 11995906
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| || ||||||||| || ||  || |||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  11996132 caacttagaccgactcatgcatcttagttaattaacaaacaacaacataggcagtatgcaaaccatcatgatataataatattgaatgtaaatcaacaac 11996033  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  11996032 tcaaatatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactgggacattaacagcaa 11995933  T
Q  234 gttaaacatcttagtttctaacctcta 260  Q
    | ||||||  |||||||||||||||||    
T  11995932 ggtaaacaaattagtttctaacctcta 11995906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 34 - 260
Target Start/End: Complemental strand, 15754992 - 15754765
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||| ||||||| ||||||||||||||| ||   | ||| ||||| |||||||||||||||||||||||||||||||||||  |||||| ||||    
T  15754992 caacttagactgactcatgcagcttagttaaataacaaataacaatataggtagtatgcaaaccatcatgatataataatatcgaatgcaaatcaacaac 15754893  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacatt-aattcataagcatcagtcttactggaacattaacagca 232  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||    
T  15754892 tcaaatatcaaacataagtcatgtaatgtatatacaattatataacattataagcaacattaaattcatatgcatcagtcttactggaatattaacagca 15754793  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| ||||||||||||||||||    
T  15754792 agataaacaacttagtttctaacctcta 15754765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 37 - 186
Target Start/End: Original strand, 16495421 - 16495570
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaactca 136  Q
    ||||||||||||||| ||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  16495421 cttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaactca 16495520  T
Q  137 attatcaaacttaagtcatgtaatgtatatacaattatataacattataa 186  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16495521 attatcagacttaagtcatgtaatgtatatacaattatataacattataa 16495570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 18005649 - 18005891
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||  |||||||||| |||||||| ||| ||||||||||||| ||||||||||    
T  18005649 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataagcagtatggaaatcatcatgatataacaatatcgaat 18005748  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcata-agcatcagtcttac 216  Q
      |||||| |||   ||||| |||| ||| ||| |||| ||||||||||||||||||||| |||||  |  |||||||  |||||    ||||| |||||    
T  18005749 gcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataccattaacaacaacattagatcatattaaatcaggcttac 18005847  T
Q  217 tggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    || ||||  ||||||||| |||||| ||||||||||||||||||    
T  18005848 tgaaacaacaacagcaagataaacaacttagtttctaacctcta 18005891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 259
Target Start/End: Original strand, 44014181 - 44014418
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||| ||||||||||||| ||||||||||    
T  44014181 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaat 44014280  T
Q  121 ataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagca-tcagtcttactgg 219  Q
      |||||| || ||||| |||| ||| ||| |||| ||||||||||||| ||||||| ||||| ||  |||||||  |||||   | |||| |||||||     
T  44014281 gcaaatcaacatctcaaatatc-aacataattcatataatgtatatacagttatataccattaaaaacaacattagatcatattaattcaggcttactga 44014379  T
Q  220 aacattaacagcaagttaaacatcttagtttctaacctct 259  Q
    ||||  ||||||||| | |||| |||||||| ||||||||    
T  44014380 aacaacaacagcaagat-aacaacttagtttttaacctct 44014418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 260
Target Start/End: Original strand, 67759 - 67989
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||  |||||| ||    
T  67759 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaaca 67858  T
Q  132 a---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagca-tcagtcttactggaacattaa 227  Q
    |   ||||| |||| ||| ||| |||| |||||||||||||||||||||||||||  |  |||||||  |||||   | |||| || |||| ||||  ||    
T  67859 acatctcaa-tatc-aacataattcatataatgtatatacaattatataacattaacaacaacattagatcatattaattcaggctcactgaaacaacaa 67956  T
Q  228 cagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||||| |||||| ||||||||||||||||||    
T  67957 cagcaagataaacaacttagtttctaacctcta 67989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 258
Target Start/End: Complemental strand, 16219835 - 16219595
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| | |||||||||||||||||||  |||||||||||||| ||  || |||||||||||||||||||| ||||||||||||| ||||||||||    
T  16219835 acatcatcatcttcaacttagaccgactcatgtagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaat 16219736  T
Q  121 ataa---atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
      ||   |||| || || ||  ||||||| ||| ||||||||||||||||||||||||||||||||  |  |||||||  | |||    |||| ||||||    
T  16219735 gcaagtcatcaacatcttaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagattatataattcaggcttact 16219636  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctc 258  Q
    | ||||  ||||||||| |||||| ||||||||||||||||    
T  16219635 gaaacaacaacagcaagataaacaacttagtttctaacctc 16219595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 21 - 183
Target Start/End: Complemental strand, 811249 - 811084
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||   |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  811249 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaatagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 811150  T
Q  121 ataaatcagcaac-tc--aattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
      || |||  ||| ||  ||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  811149 gcaagtcattaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacatta 811084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 47831821 - 47831975
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| ||||||||||||||| ||  || |||||||| ||||||||| | ||||||||||||| ||||||||||  || ||| ||    
T  47831821 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacatagacagtatgcatatcatcatgatataacaatatcgaatgcaagtcatca 47831920  T
Q  132 ac-tc--aattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
    || ||  ||  ||||||| ||| |||| |||||||||||||||||||||||||||    
T  47831921 acatcataaacatcaaacataattcatataatgtatatacaattatataacatta 47831975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 16056343 - 16056495
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa 132  Q
    |||||||||||||||| || || |||||||||||| ||  ||||||||||| || ||||||||| | |||||||||| |||||| |||  |||||| |||    
T  16056343 tcaacttagaccgactgatgcaccttagttaaataacaaacagcaacatagacattatgcaaacaa-catgatataacaatatcaaatgcaaatcaacaa 16056441  T
Q  133 c---tcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
    |   ||||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  16056442 catctcaaacatcaaacataattcatgtaatgtatatacaattatataacatta 16056495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 22072927 - 22073083
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa-ccatcatgatataataatatcgaatataaatcagc 130  Q
    |||||||||||| ||| ||| ||||||||||||||| ||  || ||||||||||| |||||||| ||| |||||||||| |||||| ||| ||| ||| |    
T  22072927 atcaacttagactgacccatgcagcttagttaaataacaaacaacaacataggcactatgcaaaaccagcatgatataacaatatcaaatgtaagtcaac 22073026  T
Q  131 aac---tcaattatcaaacttaag-tcatgtaatgtatatacaattatataacatta 183  Q
    |||   ||||  ||||||| |||  ||||||||||||||| ||||||||||||||||    
T  22073027 aacatctcaaacatcaaacataaactcatgtaatgtatatgcaattatataacatta 22073083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 2280225 - 2280125
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa 132  Q
    ||||||||||||||||||| ||||||||||||  | ||  || |||||||||||||||||||| || ||||||||||||||||| |||  |||||| |||    
T  2280225 tcaacttagaccgactcatgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataataatatcaaatgcaaatcaacaa 2280126  T
Q  133 c 133  Q
    |    
T  2280125 c 2280125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 3564481 - 3564370
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatcgaat 120  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| ||||||||||| |||    
T  3564481 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacaacatgacataataatatcaaat 3564383  T
Q  121 ataaatcagcaac 133  Q
     ||| ||| ||||    
T  3564382 gtaagtcaacaac 3564370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 15113084 - 15113188
Alignment:
Q  156 gtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaac 255  Q
    ||||| ||||||||||||||| |||||||||  ||||| || |||||   ||||||||||||| |||| |||||||| | |||||| |||||||||| ||    
T  15113084 gtaatatatatacaattatatcacattataattaacatcaactcatataaatcagtcttactgaaacaataacagcaggataaacaacttagtttcttac 15113183  T
Q  256 ctcta 260  Q
    |||||    
T  15113184 ctcta 15113188  T

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Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 15116621 - 15116725
Alignment:
Q  156 gtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaac 255  Q
    ||||| ||||||||||||||| |||||||||  ||||| || |||||  |||||||||||||| |||| |||||| | | |||||| |||||||||| ||    
T  15116621 gtaatatatatacaattatatcacattataaataacatcaactcatatacatcagtcttactgaaacaataacagtaggataaacaacttagtttcttac 15116720  T
Q  256 ctcta 260  Q
    |||||    
T  15116721 ctcta 15116725  T

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Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 10063921 - 10063838
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaa 119  Q
    |||||||| ||||||| || ||||||||| || ||  ||||||||||||| ||||||| | |||||||||||||||||||||||    
T  10063921 acttagactgactcatgcaacttagttaattaacaatcagcaacataggcggtatgcacaacatcatgatataataatatcgaa 10063838  T

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Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 252
Target Start/End: Complemental strand, 20220290 - 20220073
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagcaact 134  Q
    ||||||||||||||| ||||||||||||  | ||  || ||||||||||||||   ||| ||  ||||||||||| |||||| |||  |||||| || ||    
T  20220290 cttagaccgactcatacagcttagttaataaacaaacaacaacataggcagtacataaaacagttcatgatataacaatatcaaatgcaaatcaacatct 20220191  T
Q  135 caattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaag 234  Q
    |||  |||| |  ||| |||||||||| |||||||||||||| ||||||| |  ||||| || ||||    ||||| ||||||||||||  ||||| |||    
T  20220190 caaacatcatatataattcatgtaatgcatatacaattatatcacattattaacaacatcaaatcatctaaatcaggcttactggaacaacaacagtaag 20220091  T
Q  235 ttaaacatcttagtttct 252  Q
     ||| || ||||||||||    
T  20220090 ataagcaacttagtttct 20220073  T

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Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 38227485 - 38227578
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  |||| |||||||||||||||| ||||||||||||||| ||   ||||||||||||||||| |||| || ||||| |||||||||||    
T  38227485 catcatcttcatctacttagaccgactcatgcagcttagttaaataaca-atagcaacataggcagtatacaaaacagcatgacataataatatc 38227578  T

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Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 12698835 - 12698907
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  12698835 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa 12698907  T

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Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 19486847 - 19486766
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcg 117  Q
    |||| ||||||||||| |||||||||||  ||     ||||||||||||||||||||||| |||||||||||||||||||||    
T  19486847 acttggaccgactcatgcagcttagttagttaatgatcagcaacataggcagtatgcaaaacatcatgatataataatatcg 19486766  T

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Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 13647344 - 13647423
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||| ||| || ||||| |||||||||||    
T  13647344 cttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatgcaaaaacagcatgacataataatatc 13647423  T

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Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 18456519 - 18456436
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| ||||||||||||||| |    ||||||||||||||||| |||| || ||||| |||||||||||    
T  18456519 atcaacttagaccgactcatgcagcttagttaaataac-gatagcaacataggcagtatacaaaacaacatgacataataatatc 18456436  T

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Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 9509193 - 9509287
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaa-accatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  ||| |||||||||||||| ||| | || ||||| |||||||||||    
T  9509193 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagtaacataggcagtatacaataacagcatgacataataatatc 9509287  T

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Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 202
Target Start/End: Original strand, 14044761 - 14044935
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcga---atataaatc 127  Q
    ||||||||||||||||||| ||||||||||||  | ||   ||||||||||||||||   ||| ||  || |||||||| |||||| |   | || ||||    
T  14044761 tcaacttagaccgactcatgcagcttagttaataaacaaaaagcaacataggcagtacataaaacagctcctgatataacaatatcaatacaaatcaatc 14044860  T
Q  128 agcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcata 202  Q
    | || |||||  |||| |  ||| ||||||||||||||||||| ||||||||||||| | ||||||||| |||||    
T  14044861 aacatctcaaacatcatatataattcatgtaatgtatatacaactatataacattatcaaaaacattaaatcata 14044935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 202
Target Start/End: Original strand, 14354791 - 14354965
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcga---atataaatc 127  Q
    ||||||||||||||||||| ||||||||||||  | ||   ||||||||||||||||   ||| ||  || |||||||| |||||| |   | || ||||    
T  14354791 tcaacttagaccgactcatgcagcttagttaataaacaaaaagcaacataggcagtacataaaacagctcctgatataacaatatcaatacaaatcaatc 14354890  T
Q  128 agcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcata 202  Q
    | || |||||  |||| |  ||| ||||||||||||||||||| ||||||||||||| | ||||||||| |||||    
T  14354891 aacatctcaaacatcatatataattcatgtaatgtatatacaactatataacattatcaaaaacattaaatcata 14354965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 17062066 - 17061909
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||  || |||||| ||||  | ||||| ||||||||||| |||  || ||||||    
T  17062066 atcaacttagaccgactcatgcagcttagttaaataacaatcagcaactcag-cagtatacaaaatagcatgacataataatatcaaatgcaagtcagca 17061968  T
Q  132 ac---tcaattatcaaact-taagtcatgtaatgtatatacaattatataacattataa 186  Q
    ||   |||||||| ||  | ||| ||| |||||| |||||||||||||| ||| |||||    
T  17061967 acgtctcaattattaacatataattcaagtaatgcatatacaattatatcacaatataa 17061909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 26212012 - 26212094
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| || |||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  26212012 caacttagaccgactcatacaacttagttaaataaca-acagcaacataggcagtatacaaaatcagcatgacataataatatc 26212094  T

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Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 16386353 - 16386292
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||||||||||||| ||||||||||||||| ||  || | ||||||||||||| ||||    
T  16386353 caacttagaccgactcatgcagcttagttaaataacaaacaacgacataggcagtatacaaa 16386292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 48273403 - 48273487
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    ||||||||||||||||| || ||||||||||||||| ||  |||||||| ||||||||| | ||| || ||||| |||||||||||    
T  48273403 atcaacttagaccgacttatgcagcttagttaaataaca-acagcaacacaggcagtatacaaaaacagcatgacataataatatc 48273487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 456332 - 456367
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  456332 atcaacttagaccgactcatgcagcttagttaaata 456367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 3386344 - 3386379
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  3386344 atcaacttagaccgactcatgcagcttagttaaata 3386379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 11393438 - 11393403
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  11393438 atcaacttagaccgactcatgcagcttagttaaata 11393403  T

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Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 11972507 - 11972542
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  11972507 atcaacttagaccgactcatgcagcttagttaaata 11972542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 12255892 - 12255814
Alignment:
Q  40 agaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatc 116  Q
    |||| ||||||| ||||||||||||||| ||  || |||||||| ||||||||||| ||  ||||||||||| ||||||    
T  12255892 agacagactcatgcagcttagttaaataacaaacaacaacatagtcagtatgcaaatcaattcatgatataacaatatc 12255814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 13869357 - 13869392
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  13869357 atcaacttagaccgactcatgcagcttagttaaata 13869392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 14949273 - 14949238
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  14949273 atcaacttagaccgactcatgcagcttagttaaata 14949238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 15376864 - 15376829
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  15376864 atcaacttagaccgactcatgcagcttagttaaata 15376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 16213695 - 16213730
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  16213695 atcaacttagaccgactcatgcagcttagttaaata 16213730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 16232531 - 16232566
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  16232531 atcaacttagaccgactcatgcagcttagttaaata 16232566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 16410070 - 16410105
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  16410070 atcaacttagaccgactcatgcagcttagttaaata 16410105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 18430723 - 18430758
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  18430723 atcaacttagaccgactcatgcagcttagttaaata 18430758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 18640283 - 18640318
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  18640283 atcaacttagaccgactcatgcagcttagttaaata 18640318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 20110567 - 20110602
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  20110567 atcaacttagaccgactcatgcagcttagttaaata 20110602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 20385274 - 20385239
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  20385274 atcaacttagaccgactcatgcagcttagttaaata 20385239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 21189746 - 21189711
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  21189746 atcaacttagaccgactcatgcagcttagttaaata 21189711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 24275182 - 24275217
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  24275182 atcaacttagaccgactcatgcagcttagttaaata 24275217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 24702249 - 24702284
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  24702249 atcaacttagaccgactcatgcagcttagttaaata 24702284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 24704699 - 24704734
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  24704699 atcaacttagaccgactcatgcagcttagttaaata 24704734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 32125502 - 32125537
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  32125502 atcaacttagaccgactcatgcagcttagttaaata 32125537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 40443410 - 40443488
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||| | ||||||||||||||| ||  |||||||||| ||||||  |||| || ||||| |||||||||||    
T  40443410 cttagaccgactcgtgcagcttagttaaataacaaacagcaacatacgcagtaaacaaa-cagcatgacataataatatc 40443488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 41522928 - 41522963
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  41522928 atcaacttagaccgactcatgcagcttagttaaata 41522963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 41525390 - 41525425
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  41525390 atcaacttagaccgactcatgcagcttagttaaata 41525425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 15144143 - 15144109
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaata 67  Q
    ||||||||||||||||||| |||||||||||||||    
T  15144143 tcaacttagaccgactcatgcagcttagttaaata 15144109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 10589055 - 10589115
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    ||||||||| |||||||| ||||||||||||||| ||  |||||||||| ||||||| ||||    
T  10589055 caacttagatcgactcatgcagcttagttaaataaca-acagcaacatatgcagtatacaaa 10589115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 34 - 260
Target Start/End: Complemental strand, 19660940 - 19660714
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  19660940 caacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcttgatataatgatatcgaatataaatcaacaac 19660841  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19660840 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaacattaacagcaa 19660741  T
Q  234 gttaaacatcttagtttctaacctcta 260  Q
    | |||||| ||||||||||||||||||    
T  19660740 ggtaaacaacttagtttctaacctcta 19660714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 22959650 - 22959411
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  22959650 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatattgaat 22959551  T
Q  121 ataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactgga 220  Q
      |||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||  |||||| ||||||| |||||||||||||||||    
T  22959550 gcaaatcaacaactcaaatatcaaacataagtcatgtaatgtatatacaattatataacattttaaccaacattgattcatatgcatcagtcttactgga 22959451  T
Q  221 acattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||  |||| |||| |||||| ||| |||| |||||||||    
T  22959450 acaaaaacaacaagataaacaacttggtttttaacctcta 22959411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 21565545 - 21565787
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||   ||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  21565545 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaatagcaacataggcagtatccaaatcatcatgatataacaatatcgaat 21565644  T
Q  121 ataaatcagcaac---tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
      || ||| ||||   |||| |||||||| ||| |||||||||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||    
T  21565645 gcaagtcatcaacatttcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttact 21565744  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
     |||||  |||| |||| |||||| ||||||||||||||||||    
T  21565745 agaacaacaacaacaagataaacaacttagtttctaacctcta 21565787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 19668902 - 19669142
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaata 121  Q
    |||||||| ||||||||||||||||||| | ||||| ||||||||| ||  || |||||||| ||||||||||| |||| |||||||| ||||||||||     
T  19668902 catcatcatcatcaacttagaccgactcttgcagctcagttaaataacaaacaacaacatagacagtatgcaaatcatcgtgatataacaatatcgaatg 19669001  T
Q  122 taaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacatta--attcataagcatcagtcttactgg 219  Q
     |||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||  ||||| |  ||||||| ||||||||||||||||    
T  19669002 caaatcaacaactcaaatatcaaacataagtcctgtaatgtatatacaattatataacattataaacaacatcaatattcatatgcatcagtcttactgg 19669101  T
Q  220 aacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||  |||| |||| |||||  ||||||||||||||||||    
T  19669102 aacaacaacaacaagataaacgacttagtttctaacctcta 19669142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 260
Target Start/End: Complemental strand, 21329604 - 21329373
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| |||||| |||||| ||||||||||  || ||| ||    
T  21329604 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcataatataacaatatcgaattcaagtcatca 21329505  T
Q  132 ac-tc--aattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaac 228  Q
    || ||  ||  ||||||| ||| ||||||||||||||||||||||||||||||||  |  |||||||  | |||    |||| ||||||| ||||  |||    
T  21329504 acatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaac 21329405  T
Q  229 agcaagttaaacatcttagtttctaacctcta 260  Q
    | |||| |||||| |||||||||| |||||||    
T  21329404 aacaagataaacaacttagtttcttacctcta 21329373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 26012141 - 26011990
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa 132  Q
    ||||||||||||||||||| ||||||||||||  | ||  ||||||||||||||||||||||| || |||||||||| |||||| ||| | ||||| |||    
T  26012141 tcaacttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaagcaacatgatataacaatatcaaatgtgaatcaacaa 26012042  T
Q  133 c---tcaattatcaaacttaagtcatgtaatgtatatacaattatataacat 181  Q
    |   ||||  ||||||| ||| ||||||||||||||||||||||||||||||    
T  26012041 catctcaaacatcaaacataattcatgtaatgtatatacaattatataacat 26011990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 21502263 - 21502109
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa---atca 128  Q
    |||||||||||||||||||| ||||||||||||  | ||  ||||||||||||||||||| ||| || |||||||||| ||||||||||  ||   ||||    
T  21502263 atcaacttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgtaaatcagcatgatataacaatatcgaatgcaagtcatca 21502164  T
Q  129 gcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
     || || ||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  21502163 tcatcttaaacatcaaacataattcatgtaatgtatatacaattatataacatta 21502109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 36314596 - 36314678
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaa 119  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||    
T  36314596 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatcgaa 36314678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 260
Target Start/End: Complemental strand, 20027043 - 20026816
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagcaac- 133  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| |||| ||  |||||||||||||||||| |||  || ||| ||||     
T  20027043 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatccaaaacagttcatgatataataatatcaaatgcaattcaacaaca 20026944  T
Q  134 tca-attatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    ||| |  ||||||| ||| ||||||||||||||||||| |||||| |||||| |  ||||||||  ||||    |||| ||||||| ||||   ||| ||    
T  20026943 tcacaacatcaaacataattcatgtaatgtatatacaactatatagcattatcaacaacattaaaacatataattcaggcttactgaaacaactacaaca 20026844  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| |||||||||| |||||||    
T  20026843 agataaacaacttagtttcttacctcta 20026816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 21997651 - 21997557
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  21997651 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacaacatgacataataatatc 21997557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 22144068 - 22144147
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||| ||||||||||||||| ||  || ||||||||| |||||||||| || |||||||||| ||||||    
T  22144068 cttagaccgactcatgcagcttagttaaataacagacatcaacataggtagtatgcaaaacaacatgatataacaatatc 22144147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 36314672 - 36314719
Alignment:
Q  139 tatcaaacttaagtcatgtaatgtatatacaattatataacattataa 186  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  36314672 tatcgaacttaagtcatgtaatgtatatacaattatataacattataa 36314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 8286960 - 8286888
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  8286960 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa 8286888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 21729169 - 21729087
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  21729169 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaatcagcatgacataataatatc 21729087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 21808494 - 21808412
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  21808494 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaatcagcatgacataataatatc 21808412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 22075035 - 22075117
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||| | ||| || ||||| |||||||||||    
T  22075035 caacttagaccgactcattcagcttagttaaataaca-acagcaacataggaagtatacaaaatcaacatgacataataatatc 22075117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 23390613 - 23390519
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||| |||||| | ||| || ||||| |||||||||||    
T  23390613 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacatagacagtatacaaaaacaacatgacataataatatc 23390519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 25421536 - 25421630
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| | ||| || ||||| |||||||||||    
T  25421536 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaaaacaacatgacataataatatc 25421630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 24493573 - 24493666
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| |||||| ||||| || ||   ||||||||||||||||| |||| || ||||| |||||||||||    
T  24493573 catcatcttcatcaacttagaccgactcatgcagcttggttaagtaaca-atagcaacataggcagtatacaaaacagcatgacataataatatc 24493666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 24529224 - 24529296
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| ||||    
T  24529224 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaa 24529296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 40725871 - 40725952
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcg 117  Q
    |||| ||||||||||| |||||||||||  ||     ||||||| ||||||||||||||| |||||||||||||||||||||    
T  40725871 acttggaccgactcatgcagcttagttagttaatgatcagcaacgtaggcagtatgcaaagcatcatgatataataatatcg 40725952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 1096480 - 1096543
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    ||||||||||||||||||||| ||||||||||||||| ||  |||||||| ||| ||||||||||    
T  1096480 catcaacttagaccgactcatgcagcttagttaaataaca-acagcaacacaggtagtatgcaaa 1096543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 9077956 - 9078050
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||| ||| ||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  9077956 catcatcttcatcaacttagactgacccatgcagcttagttaaataaca-acagcaacataggcagtatacgaaaacagcatgacataataatatc 9078050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 13025315 - 13025396
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatga 104  Q
    |||||||  ||||||||||||||||||||| |||| |||||||||| ||   ||||||||||||||||| |||| || |||||    
T  13025315 catcatcttcatcaacttagaccgactcatgcagcatagttaaataaca-atagcaacataggcagtatacaaaacagcatga 13025396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 13095499 - 13095580
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatga 104  Q
    |||||||  ||||||||||||||||||||| |||| |||||||||| ||   ||||||||||||||||| |||| || |||||    
T  13095499 catcatcttcatcaacttagaccgactcatgcagcatagttaaataaca-atagcaacataggcagtatacaaaacagcatga 13095580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 37723922 - 37723975
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||| ||||||| ||||||||||||||| ||  ||||||||||||||||||    
T  37723922 cttagactgactcatgcagcttagttaaataacagacagcaacataggcagtat 37723975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 264919 - 264884
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  264919 atcaacttagaccgactcatgcagcttagttaaata 264884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 2154765 - 2154730
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  2154765 atcaacttagaccgactcatgcagcttagttaaata 2154730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 10733091 - 10733056
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  10733091 atcaacttagaccgactcatgcagcttagttaaata 10733056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 10775827 - 10775792
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  10775827 atcaacttagaccgactcatgcagcttagttaaata 10775792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 11581350 - 11581315
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  11581350 atcaacttagaccgactcatgcagcttagttaaata 11581315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 20909023 - 20909058
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  20909023 atcaacttagaccgactcatgcagcttagttaaata 20909058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 20918099 - 20918064
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  20918099 atcaacttagaccgactcatgcagcttagttaaata 20918064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 23064522 - 23064557
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  23064522 atcaacttagaccgactcatgcagcttagttaaata 23064557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 25431414 - 25431492
Alignment:
Q  38 ttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||| || |||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  25431414 ttagaccgactcatgcatcttagttaaataaca-acagcaacataggcagtatacaaaaacaacatgacataataatatc 25431492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 29329945 - 29329980
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  29329945 atcaacttagaccgactcatgcagcttagttaaata 29329980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 29345991 - 29346026
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  29345991 atcaacttagaccgactcatacagcttagttaaata 29346026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 29348464 - 29348499
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  29348464 atcaacttagaccgactcatacagcttagttaaata 29348499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 29350937 - 29350972
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  29350937 atcaacttagaccgactcatacagcttagttaaata 29350972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 36154931 - 36154896
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  36154931 atcaacttagaccgactcatgcagcttagttaaata 36154896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 38619445 - 38619480
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  38619445 atcaacttagaccgactcatgcagcttagttaaata 38619480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 39245147 - 39245182
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  39245147 atcaacttagaccgactcatgcagcttagttaaata 39245182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 39363395 - 39363430
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  39363395 atcaacttagaccgactcatgcagcttagttaaata 39363430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 20902159 - 20902125
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaata 67  Q
    ||||||||||||||||||| |||||||||||||||    
T  20902159 tcaacttagaccgactcatgcagcttagttaaata 20902125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 21293071 - 21293020
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagta 89  Q
    |||||||||| |||| ||||||||||||||| ||  |||||||||||||||||    
T  21293071 cttagaccgattcatgcagcttagttaaataaca-acagcaacataggcagta 21293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 179; Significance: 1e-96; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 11308 - 11534
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  11308 caacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaac 11407  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||    
T  11408 tcaattatcaaacttaagtcatgtaatgtatatactattatataacattataagcaacattaattcataagcatcagtcttacttgaacattaacaccaa 11507  T
Q  234 gttaaacatcttagtttctaacctcta 260  Q
    | |||||| ||||||||||||||||||    
T  11508 ggtaaacaacttagtttctaacctcta 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 34 - 254
Target Start/End: Original strand, 2013 - 2233
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| ||||||||||||||| ||  ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  2013 caacttagaccgactcatgcagcttagttaaataacaaacacaaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaac 2112  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  2113 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagacttactggaacattaacagcaa 2212  T
Q  234 gttaaacatcttagtttctaa 254  Q
    | |||||| ||||||||||||    
T  2213 ggtaaacaacttagtttctaa 2233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 28418 - 28512
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| | ||| || ||||| |||||||||||    
T  28418 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaaaacaacatgacataataatatc 28512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 4568 - 4601
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||| |||||||||||||||    
T  4568 caacttagaccgactcatgcagcttagttaaata 4601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 32 - 260
Target Start/End: Original strand, 15675 - 15903
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||| | ||||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||    
T  15675 atcaacttagaccgactcgtgcagcttagttaaataacaaacagcaacataggcagtatacaaaccatcatgatataataatatcgaatgtaaatcaaca 15774  T
Q  132 actcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||    
T  15775 actcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattatttcataagaatcagtcttactggatcattaacagc 15874  T
Q  232 aagttaaacatcttagtttctaacctcta 260  Q
    ||| |||||| ||||||||||||||||||    
T  15875 aaggtaaacaacttagtttctaacctcta 15903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 6e-92; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 20918620 - 20918846
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| ||||||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  20918620 caacttagaccgactcatgcagcttagttaaataacaaactgcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaac 20918719  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| |||    
T  20918720 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacatcaattcataagcatgagtcttactggaacattaacaacaa 20918819  T
Q  234 gttaaacatcttagtttctaacctcta 260  Q
    | |||||  ||||||||||||||||||    
T  20918820 ggtaaacgacttagtttctaacctcta 20918846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 33681010 - 33681252
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| | ||||||||||||||||||| || |||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  33681010 acatcatcatcttcaacttagaccgactcatgcaacttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 33681109  T
Q  121 ataaatcagcaac---tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
      || ||  ||||   |||| |||||||| ||| |||||||||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||    
T  33681110 gcaagtcgtcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttact 33681209  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
     |||||  |||| |||| |||||| ||||||||||||||||||    
T  33681210 agaacaacaacaacaagataaacaacttagtttctaacctcta 33681252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 20248282 - 20248520
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| || |||||||||| | ||  || |||||||||||||||||||| ||||||||||||| ||||||||||    
T  20248282 acatcatcatcatcaacttagaccgactcatgcaacttagttaaaaaacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaat 20248381  T
Q  121 ataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactgga 220  Q
      |||||| ||||| || |||||||| |||||||||||||||||||||||||||||| ||||||||  |||||  ||||||| ||||||||||||||||     
T  20248382 gcaaatcaacaacttaaatatcaaacataagtcatgtaatgtatatacaattatatatcattataaacaacatggattcatatgcatcagtcttactgg- 20248480  T
Q  221 acattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||  |||| |||| |||| | ||||||||||||||||||    
T  20248481 acaacaacatcaagataaataacttagtttctaacctcta 20248520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 38 - 186
Target Start/End: Complemental strand, 14295652 - 14295504
Alignment:
Q  38 ttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaactcaa 137  Q
    |||||||||||||| ||||||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  14295652 ttagaccgactcatgcagcttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaactcaa 14295553  T
Q  138 ttatcaaacttaagtcatgtaatgtatatacaattatataacattataa 186  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14295552 ttatcagacttaagtcatgtaatgtatatacaattatataacattataa 14295504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 33 - 260
Target Start/End: Complemental strand, 52928076 - 52927858
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa 132  Q
    ||||||||||||||||||| ||||||||||||||| ||  || |||||||| ||||||||||| ||||||||||||| ||||||||||         ||     
T  52928076 tcaacttagaccgactcatgcagcttagttaaataacaaacaacaacatagacagtatgcaaatcatcatgatataacaatatcgaat---------cat 52927986  T
Q  133 ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||  || ||||    
T  52927985 ctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaatagca 52927886  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| ||||||||||||||||||    
T  52927885 agataaacaacttagtttctaacctcta 52927858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 22130973 - 22130843
Alignment:
Q  73 cagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaatt 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  22130973 cagcaacataggcagtatccaaaccatcatgatataataatatcgaatgtaaatcaacaactcaattatcaaacttaagtcatgtaatgcatatacaatt 22130874  T
Q  173 atataacattataagaaacattaattcataa 203  Q
    ||||||||||||||| ||||| || ||||||    
T  22130873 atataacattataagcaacatcaaatcataa 22130843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 22237630 - 22237873
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| | |||||||||||||||||||  |||||||||||||| ||  |||| ||||||||| |||||||| ||||||||||||| ||||||||||    
T  22237630 acatcatcatcttcaacttagaccgactcatgaagcttagttaaataacaaacagcgacataggcattatgcaaatcatcatgatataacaatatcgaat 22237729  T
Q  121 ataa---atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
      ||   |||| || ||||| |||||||| ||| |||||||||||||||||||||||||||| ||| ||  ||||| |||||||| | ||||||||  ||    
T  22237730 gcaagtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataactttagaaacaacatcaattcatatgtatcagtctcgct 22237829  T
Q  218 ggaacattaa-cagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||||  || ||||||| |||||| ||||||||||||||||||    
T  22237830 ggaacaacaatcagcaagataaacaacttagtttctaacctcta 22237873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 51130632 - 51130732
Alignment:
Q  86 agtatgcaaaccatcatgatataataatatcgaatataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattata 185  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51130632 agtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaactcaattatcagacttaagtcatgtaatgtatatacaattatataacattata 51130731  T
Q  186 a 186  Q
    |    
T  51130732 a 51130732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 22921987 - 22921745
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||| ||||||||||||| ||||||||||    
T  22921987 acatcatcatcatcatcttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaat 22921888  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagca-tcagtcttac 216  Q
      |||||| |||   ||||| |||| |||  || |||| |||||||||||||||||||||||||||  |  |||||||  |||||   | |||| |||||    
T  22921887 gcaaatcaacaacatctcaaatatc-aacaaaattcatataatgtatatacaattatataacattaacaacaacattagatcatattaattcaggcttac 22921789  T
Q  217 tggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    || ||||  ||||||||| |||||| ||||||||||||||||||    
T  22921788 tgaaacaacaacagcaagataaacaacttagtttctaacctcta 22921745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 21754052 - 21754279
Alignment:
Q  25 catcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa 124  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||| ||||||||||||| |||||| |||  ||    
T  21754052 catcatcatcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcaaatgcaa 21754151  T
Q  125 --atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaac 222  Q
      | || || |||||||||| ||| |||  ||| ||||||||||||        ||||||||||  ||||| |||||||| |||||||||||||||||||    
T  21754152 tcaacaacatctcaattatc-aacataatccatttaatgtatatac--------aacattataaacaacatcaattcatatgcatcagtcttactggaac 21754242  T
Q  223 attaacagcaagttaaacatcttagtttctaacctct 259  Q
    | | |||||||| |||||| |||||||||||||||||    
T  21754243 aatgacagcaagataaacaacttagtttctaacctct 21754279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 16758664 - 16758754
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaata 121  Q
    ||||||||||||||||||| || |||||||||||| ||  ||||||||||||||||||||||||||  ||||||||||| |||||| ||||    
T  16758664 tcaacttagaccgactcatgcaacttagttaaataacaaacagcaacataggcagtatgcaaaccagttcatgatataacaatatcaaata 16758754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 260
Target Start/End: Complemental strand, 21861672 - 21861445
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa---atcagcaac 133  Q
    ||||||||||||||| |||||||| |||  | ||  ||||||||||||||||||||||| || |||||||||| |||||| |||  ||   |||| || |    
T  21861672 cttagaccgactcatgcagcttagctaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatc 21861573  T
Q  134 tcaatta-tcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    ||||  | ||| |  ||| ||| ||||||||||||||||||||| |||||||||  ||||| |  ||||||   |||| ||||||| ||||  || ||||    
T  21861572 tcaaacattcatatataattcaagtaatgtatatacaattatatcacattataaacaacatcatatcataatattcaggcttactgaaacaacaatagca 21861473  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| |||||||||| |||||||    
T  21861472 agataaacaacttagtttcttacctcta 21861445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 35261180 - 35261032
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaactca 136  Q
    ||||||||||||||| ||||||||||||  | ||  ||||||||||||||||||||||| || |||||||||| |||||| |||  |||||| || ||||    
T  35261180 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaaatcaacatctca 35261081  T
Q  137 atta-tcaaacttaagtcatgtaatgtatatacaattatataacattat 184  Q
    |  | ||| || ||| ||| |||||| ||||||||||| || |||||||    
T  35261080 aacattcatacataattcaagtaatgcatatacaattacatcacattat 35261032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 252
Target Start/End: Complemental strand, 21896358 - 21896142
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa---atcagcaac 133  Q
    ||||||||||||||| || |||||||||  | ||  |||||||||||||||||| |||| || |||||||||| |||||| |||  ||   |||| || |    
T  21896358 cttagaccgactcatgcaacttagttaataaacaaacagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatc 21896259  T
Q  134 tcaatta-tcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    ||||  | ||| |  ||| ||||||||||||||||||||||||| |||||||||  ||||| || ||||||   |||| ||||||| |||   |||| ||    
T  21896258 tcaaacattcatatataattcatgtaatgtatatacaattatatcacattataaacaacatcaaatcataatattcaggcttactgaaac---aacaaca 21896162  T
Q  233 agttaaacatcttagtttct 252  Q
    || |||||| ||||||||||    
T  21896161 agataaacaacttagtttct 21896142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 50210330 - 50210236
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  50210330 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacaacatgacataataatatc 50210236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 34509784 - 34509856
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  34509784 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa 34509856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 45574989 - 45574833
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatcgaatataaatcagcaa--- 132  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||| ||| || ||||| ||||||||| | |||  || ||| |||       
T  45574989 cttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatgcaaaaacagcatgacataataataccaaatgcaagtcaacaacgt 45574891  T
Q  133 ctcaattatcaa-acttaagtcatgtaatgtatatacaattatataacattataagaa 189  Q
    ||||||||| || |  ||| ||| |||||| |||||||||||||| ||| ||||||||    
T  45574890 ctcaattattaacatataattcaagtaatgcatatacaattatatcacaatataagaa 45574833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 20454660 - 20454606
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcag 87  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||    
T  20454660 atcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcag 20454606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 20847259 - 20847205
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagta 89  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||    
T  20847259 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagta 20847205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 21161719 - 21161817
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||| || |||||||| || |||||||||| | ||  |||||||| |  ||||||||||| |||| |||||||| ||||||||||    
T  21161719 acatcatcatcatcaacttggatcgactcatgcaacttagttaaacaacaaacagcaacaaaa-cagtatgcaaatcatcgtgatataacaatatcgaat 21161817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 27250834 - 27250752
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||   ||||||||||||||||| | ||| || ||||| |||||||||||    
T  27250834 caacttagaccgactcatgcagcttagttaaataaca-atagcaacataggcagtatacaaaaacagcatgacataataatatc 27250752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 21026696 - 21026756
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||| ||||||||||| ||||    
T  21026696 caacttagaccgactcatgcagcttagttaaataaca-acagcaatataggcagtatacaaa 21026756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 21840778 - 21840861
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||| | ||||||| | ||| |||||||| |||||||||||    
T  21840778 atcaacttagaccgactcatgcagcttagttaaataaca-acagcaacaca-gcagtatacaaaaacatcatgacataataatatc 21840861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 433023 - 433058
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  433023 atcaacttagaccgactcatgcagcttagttaaata 433058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 13213013 - 13212978
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  13213013 atcaacttagaccgactcatgcagcttagttaaata 13212978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 13988877 - 13988912
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  13988877 atcaacttagaccgactcatgcagcttagttaaata 13988912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 16361928 - 16361963
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  16361928 atcaacttagaccgactcatgcagcttagttaaata 16361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 21342107 - 21342142
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  21342107 atcaacttagaccgactcatgcagcttagttaaata 21342142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 21346972 - 21347007
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  21346972 atcaacttagaccgactcatgcagcttagttaaata 21347007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 21707178 - 21707213
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  21707178 atcaacttagaccgactcatgcagcttagttaaata 21707213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 21711720 - 21711755
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  21711720 atcaacttagaccgactcatgcagcttagttaaata 21711755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 21923442 - 21923407
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  21923442 atcaacttagaccgactcatgcagcttagttaaata 21923407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 22532273 - 22532367
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  |||||||||||||| |||||| ||  ||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  22532273 catcatcttcatcaacttagaccaactcatgcaatttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatc 22532367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 23593886 - 23593851
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  23593886 atcaacttagaccgactcatgcagcttagttaaata 23593851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 29298148 - 29298183
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  29298148 atcaacttagaccgactcatgcagcttagttaaata 29298183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 29776699 - 29776734
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  29776699 atcaacttagaccgactcatgcagcttagttaaata 29776734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 31612324 - 31612359
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  31612324 atcaacttagaccgactcatgcagcttagttaaata 31612359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 12271695 - 12271792
Alignment:
Q  156 gtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaac 255  Q
    ||||| ||||||||||||||| |||||||||  ||||| || |||       ||||||||||| |||| |||||||| | |||||| |||||||||| ||    
T  12271695 gtaatatatatacaattatatcacattataaataacatcaactca-------cagtcttactgaaacaataacagcaggataaacaacttagtttcttac 12271787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 20636975 - 20637017
Alignment:
Q  142 caaacttaagtcatgtaatgtatatacaattatataacattat 184  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||    
T  20636975 caaacataattcatataatgtatatacaattatataacattat 20637017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 38801483 - 38801433
Alignment:
Q  44 cgactcattcagcttagttaaataccacccagcaacataggcagtatgcaa 94  Q
    |||||||| ||||||||||||||| ||  |||||||||||||||| |||||    
T  38801483 cgactcatgcagcttagttaaataacaaacagcaacataggcagtgtgcaa 38801433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 22123215 - 22123171
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaaca 80  Q
    |||||||||||||||| ||||||||||||||| ||  ||||||||    
T  22123215 acttagaccgactcatgcagcttagttaaatagcaaacagcaaca 22123171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 50614219 - 50614167
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagta 89  Q
    ||||||||||||||| ||||||||||||  | ||  |||||||||||||||||    
T  50614219 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 50614167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 50622047 - 50621995
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagta 89  Q
    ||||||||||||||| ||||||||||||  | ||  |||||||||||||||||    
T  50622047 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 50621995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 3e-91; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 35 - 260
Target Start/End: Complemental strand, 28496575 - 28496350
Alignment:
Q  35 aacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaact 134  Q
    ||||||||||||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  28496575 aacttagaccgactcatgcagcttagttaaataacaattagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaact 28496476  T
Q  135 caattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaag 234  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  28496475 caaatatcaaacataagtcatgtaatgtatatacaattatataacattataagcaacattaattcatatgcatcagtcttactggaacattaacagcaag 28496376  T
Q  235 ttaaacatcttagtttctaacctcta 260  Q
     |||||| |||||||||||| |||||    
T  28496375 gtaaacaacttagtttctaaactcta 28496350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 35 - 260
Target Start/End: Complemental strand, 29808986 - 29808761
Alignment:
Q  35 aacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaact 134  Q
    ||||||||||||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  29808986 aacttagaccgactcatgcagcttagttaaataacaattagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaact 29808887  T
Q  135 caattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaag 234  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  29808886 caaatatcaaacataagtcatgtaatgtatatacaattatataacattataagcaacattaattcatatgcatcagtcttactggaacattaacagcaag 29808787  T
Q  235 ttaaacatcttagtttctaacctcta 260  Q
     |||||| |||||||||||| |||||    
T  29808786 gtaaacaacttagtttctaaactcta 29808761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 1561319 - 1561546
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||| ||||||| ||||||||||||||| ||   | ||| ||||| |||||||||||||||||||||||||||||||||||  |||||| ||||    
T  1561319 caacttagactgactcatgcagcttagttaaataacaaataacaatataggtagtatgcaaaccatcatgatataataatatcgaatgcaaatcaacaac 1561418  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacatt-aattcataagcatcagtcttactggaacattaacagca 232  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||    
T  1561419 tcaaatatcaaacataagtcatgtaatgtatatacaattatataacattataagcaacattaaattcatatgcatcagtcttactggaatattaacagca 1561518  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| ||||||||||||||||||    
T  1561519 agataaacaacttagtttctaacctcta 1561546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 19652198 - 19652438
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| | ||  || |||||||||||||||||||| ||||||||||||| ||||||||||    
T  19652198 acatcatcatcatcaacttagaccgactcatgcagcttagttaaacaacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaat 19652297  T
Q  121 ataa--atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactg 218  Q
      ||  | || || |||||  ||||| | |||  ||| ||| ||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  19652298 gcaatcaacaacatctcaaacatcaa-cataatccatttaaagtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactg 19652396  T
Q  219 gaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||| |||||||||| |||||| ||||||||||||||||||    
T  19652397 gaacaataacagcaagataaacaacttagtttctaacctcta 19652438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 258
Target Start/End: Original strand, 19668386 - 19668615
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagc 130  Q
    ||||||||||||||||||| |||||||||||| || ||  |||||||||||  |||||||||| ||  ||||||||||| |||||| |||  |||||| |    
T  19668386 tcaacttagaccgactcatgcagcttagttaattaacaaacagcaacatagatagtatgcaaaacagttcatgatataacaatatcaaatgcaaatcaac 19668485  T
Q  131 aac-tca-attatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaac 228  Q
    ||| ||| |  |||| || ||| ||||||||||||||||||| ||||||||||||| |  |||| ||  |||||  |||||| ||||||| ||||  |||    
T  19668486 aacatcacaacatcatacgtaattcatgtaatgtatatacaactatataacattatcaacaacactacatcatatacatcagacttactgaaacaacaac 19668585  T
Q  229 agcaagttaaacatcttagtttctaacctc 258  Q
    |||||| |||||| |||||||||| |||||    
T  19668586 agcaagataaacaacttagtttcttacctc 19668615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 27333325 - 27333238
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaa 119  Q
    |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  27333325 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaa 27333238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 27394065 - 27393978
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaa 119  Q
    |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  27394065 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaa 27393978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 258
Target Start/End: Original strand, 23019425 - 23019649
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa---c 133  Q
    |||||||||||| || ||||||||||||  | ||  |||||||||| |||||||||||| || |||||||||| |||||| |||  || ||| |||   |    
T  23019425 cttagaccgacttatgcagcttagttaataaacaaacagcaacataagcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcaacaacatc 23019524  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    ||||  ||||||| ||| ||||||||||||||||||||||||||||||||  |   ||||||  | |||    |||| ||||||| ||||  ||||||||    
T  23019525 tcaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacgacattagattatatagttcaggcttactgaaacaacaacagcaa 23019624  T
Q  234 gttaaacatcttagtttctaacctc 258  Q
    | |||||| ||||||||||||||||    
T  23019625 gataaacaacttagtttctaacctc 23019649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 9098620 - 9098466
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagc 130  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||||| |||||||||||||| ||  ||||||||||| |||||| |||  |  ||| |    
T  9098620 tcaacttagaccgactcatgcagcttagttaaataacaaacagcaacaaaggcagtatgcaaaacaattcatgatataacaatatcaaatgcatttcaac 9098521  T
Q  131 aac-tca-attatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
    ||| ||| |  ||||||| ||| |||||||||||||||| |||||||||||||||    
T  9098520 aacttcacaacatcaaacataattcatgtaatgtatatataattatataacatta 9098466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 260
Target Start/End: Original strand, 20109153 - 20109386
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa---atcag 129  Q
    ||||||||||||||||||| ||||||||||||  | ||  ||||||||||||||||||||||| || ||| |||||| |||||| |||  ||   ||||     
T  20109153 tcaacttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacataatataacaatatcaaatgcaagtcatcaa 20109252  T
Q  130 caactcaatta-tcaaacttaagtcatgtaatgtatataca--attatataacattataagaaacattaattcataagcatcagtcttactggaacatta 226  Q
    || ||||| || ||| |  ||| ||| ||||||||||||||  ||||||| |||||||||  ||||| |||| |||  ||||||||||||| |||    |    
T  20109253 catctcaaatattcatatataattcaagtaatgtatatacaatattatatcacattataaacaacatcaattgatatacatcagtcttactagaaagaca 20109352  T
Q  227 acagcaagttaaacatcttagtttctaacctcta 260  Q
     ||||||| |||||| |||||||||| |||||||    
T  20109353 tcagcaagataaacaacttagtttcttacctcta 20109386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 4185939 - 4185840
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||| ||| ||||||||| ||||||||||| |||| |||||||| | ||  ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  4185939 acatcgtcatcatcaacttggaccgactcatgcagcatagttaaacaacagacagcaacataggcagtatgcaactcatcatgatataacaatatcgaat 4185840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 20076704 - 20076797
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||  |||| || ||||| |||||||||||    
T  20076704 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtaaacaaaacagcatgacataataatatc 20076797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 25644335 - 25644397
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||    
T  25644335 tcaacttagaccgactcatgcagcttagttaaataacagacagcaacataggcagtatgcaaa 25644397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 4186380 - 4186469
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||| |||| |||||||| | ||  ||||||||||| ||||||||||  ||||||||||||| ||||||||||    
T  4186380 catcaacttggaccgactcatgcagcatagttaaacaacaggcagcaacatagacagtatgcaactcatcatgatataacaatatcgaat 4186469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 17287903 - 17287819
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaac-catcatgatataataatatc 116  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||||||| ||||| ||||| || ||||| |||||||||||    
T  17287903 atcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggtagtatacaaacacagcatgacataataatatc 17287819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 8227616 - 8227533
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcg 117  Q
    |||||| ||||||||||| |||||||||||  ||     ||||||| ||||||||||||||| |||||||||||||||||||||    
T  8227616 caacttggaccgactcatgcagcttagttagttaatgatcagcaacgtaggcagtatgcaaaacatcatgatataataatatcg 8227533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 16496260 - 16496342
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  16496260 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaatcagcatgacataataatatc 16496342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 29060544 - 29060638
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||| ||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  29060544 catcatcttcatcagcttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacaacatgacataataatatc 29060638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 4668277 - 4668230
Alignment:
Q  73 cagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  4668277 cagcaacataggcagtatgcaactcatcatgatataacaatatcgaat 4668230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 4675124 - 4675077
Alignment:
Q  73 cagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  4675124 cagcaacataggcagtatgcaactcatcatgatataacaatatcgaat 4675077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 18409944 - 18409850
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||| ||||||||| ||  |||||||| ||||||||| | ||| || ||||| |||||||||||    
T  18409944 catcatcttcatcaacttagaccgactcatgcagctcagttaaataaca-acagcaacacaggcagtatacgaaaacaacatgacataataatatc 18409850  T

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Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 20638400 - 20638306
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  |||||||||||||| |||||| ||||||||||||||| ||  || ||||||||||||||| | ||| || ||||| |||||||||||    
T  20638400 catcatcttcatcaacttagaccaactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaaaacaacatgacataataatatc 20638306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 22080800 - 22080757
Alignment:
Q  77 aacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  22080800 aacataggcagtatgcaaaacatcatgatataacaatatcgaat 22080757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 19303657 - 19303564
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  ||||| ||||||||||||||| ||||||||||||||| ||  || ||||| ||| ||||| |||| || ||||| |||||||||||    
T  19303657 catcatcttcatcatcttagaccgactcatgcagcttagttaaataaca-acaacaacacaggaagtatacaaaacaacatgacataataatatc 19303564  T

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Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 20361068 - 20360983
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||| |||||||| ||||||||||||||| ||  ||||||||||||||| || | ||| || ||||| |||||||||||    
T  20361068 catcaacttagatcgactcatgcagcttagttaaataaca-acagcaacataggcagcatacaaaaacagcatgacataataatatc 20360983  T

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Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 186
Target Start/End: Original strand, 22782238 - 22782395
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatcgaatataaatcagc 130  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||| | ||||||| | ||| || ||||| ||||||||||| |||  || ||| |    
T  22782238 atcaacttagaccgactcatgcagcttagttaaataaca-acagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaac 22782335  T
Q  131 aa---ctcaatta-tcaaacttaagtcatgtaatgtatatacaattatataacattataa 186  Q
    ||   |||||||| ||| || ||| ||| |||||| |||||||||||||| ||| |||||    
T  22782336 aacgtctcaattattcacacataattcaagtaatgcatatacaattatatcacaatataa 22782395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 25656640 - 25656723
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||||| ||||||| | ||| || ||||| |||||||||||    
T  25656640 atcaacttagaccgactcatgcagcttagttaaataaca-acagcaacata-gcagtatacaaaaacagcatgacataataatatc 25656723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 30676861 - 30676778
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||| | ||||||| | ||| || |||||||||||||||||    
T  30676861 atcaacttagaccgactcatgcagcttagttaaataaca-acagcaacaca-gcagtatacaaaaacagcatgatataataatatc 30676778  T

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Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 25629472 - 25629428
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaat 66  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||    
T  25629472 catcatcttcatcaacttagaccgactcatgcagcttagttaaat 25629428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 35245605 - 35245682
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||| |||||||||||| || ||  || ||||||||||||||| |||  || ||||| |||||||||||    
T  35245605 cttagaccgactcatgcagcttagttaattaacaaacaccaacataggcagtatacaa--caacatgacataataatatc 35245682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 2291331 - 2291296
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  2291331 atcaacttagaccgactcatgcagcttagttaaata 2291296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 8055040 - 8055075
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  8055040 atcaacttagaccgactcatgcagcttagttaaata 8055075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 12742328 - 12742363
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  12742328 atcaacttagaccgactcatgcagcttagttaaata 12742363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 18334743 - 18334708
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  18334743 atcaacttagaccgactcatgcagcttagttaaata 18334708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 19005057 - 19005092
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  19005057 atcaacttagaccgactcatgcagcttagttaaata 19005092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 19859070 - 19859035
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  19859070 atcaacttagaccgactcatgcagcttagttaaata 19859035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 22831524 - 22831571
Alignment:
Q  39 tagaccgactcattcagcttagttaaataccacccagcaacataggca 86  Q
    ||||||||||||| ||||||||||||||| ||  ||||||||||||||    
T  22831524 tagaccgactcatgcagcttagttaaataacaaacagcaacataggca 22831571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 24422558 - 24422593
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  24422558 atcaacttagaccgactcatgcagcttagttaaata 24422593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 25714431 - 25714466
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  25714431 atcaacttagaccgactcatgcagcttagttaaata 25714466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 25754820 - 25754855
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  25754820 atcaacttagaccgactcatgcagcttagttaaata 25754855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 26924791 - 26924756
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  26924791 atcaacttagaccgactcatgcagcttagttaaata 26924756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 33861805 - 33861840
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  33861805 atcaacttagaccgactcatgcagcttagttaaata 33861840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 33864289 - 33864324
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  33864289 atcaacttagaccgactcatgcagcttagttaaata 33864324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 16920728 - 16920679
Alignment:
Q  41 gaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||||||| ||||||||||||||| ||  ||||| ||||||||||||    
T  16920728 gaccgactcatgcagcttagttaaataacaaacagcagcataggcagtat 16920679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 22780344 - 22780299
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||  ||||||||||||| ||||||| |||||||||||||||    
T  22780344 catcatcttcatcaacttagactgactcatgcagcttagttaaata 22780299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 167; Significance: 2e-89; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 34139 - 34365
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||    
T  34139 caacttagaccgactcatacagcttagttaaataacaaacaacaacataggcagtatacaacccatcatgatataataatatcgaatgtaaatcaacaac 34238  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  34239 tcaattatcaaacttaagtcaagtaatatatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaaaattaacagcaa 34338  T
Q  234 gttaaacatcttagtttctaacctcta 260  Q
    | |||||| ||||||||||||||||||    
T  34339 ggtaaacaacttagtttctaacctcta 34365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 286 - 322
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||| |||| |||||||||||||||    
T  286 catcaacttagaccgattcatgcagcttagttaaata 322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 4e-87; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 34 - 260
Target Start/End: Original strand, 15551833 - 15552058
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||    
T  15551833 caacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgatataataatatcgaaggtaaatcaacaac 15551932  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||     
T  15551933 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattgattcataagcatcagtcttactgggacattaacagcag 15552032  T
Q  234 gttaaacatcttagtttctaacctcta 260  Q
    | | |||| ||||||||||||||||||    
T  15552033 ggt-aacaacttagtttctaacctcta 15552058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 56 - 260
Target Start/End: Original strand, 16596686 - 16596890
Alignment:
Q  56 cttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaactcaattatcaaacttaagtcat 155  Q
    |||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  16596686 cttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatcgaatgtaaatcatcaactcaattatcaaacttaagtcat 16596785  T
Q  156 gtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaac 255  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  16596786 gtaatgtatatacaattatataacattataagcaacattaatttataagcatcagtcttacttgaacattaacagcaaggtaaacaacttagtttctaac 16596885  T
Q  256 ctcta 260  Q
    |||||    
T  16596886 ctcta 16596890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 12774010 - 12774242
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  12774010 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 12774109  T
Q  121 ataa--atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactg 218  Q
    | ||  | || || |||||||||| ||| |||  ||| ||||||||||||        ||||||||||  ||||| |||||||| |||||||||||||||    
T  12774110 acaatcaacaacatctcaattatc-aacataatccatttaatgtatatac--------aacattataaacaacatcaattcatatgcatcagtcttactg 12774200  T
Q  219 gaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||||  ||||||||| |||||| ||||||||||||||||||    
T  12774201 gaacaacaacagcaagataaacaacttagtttctaacctcta 12774242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 8846359 - 8846617
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  8846359 acatcatcatcatcaacttagaccgacttattcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgagataacaatatcgaat 8846458  T
Q  121 a-taa------------------atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcat 201  Q
      |||                  |||| || ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  8846459 gctaacaatatcgaatgcaagtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcat 8846558  T
Q  202 aagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    | ||||||||||||||||||||  |||  |||| |||||| |||||||||||| |||||    
T  8846559 atgcatcagtcttactggaacaacaactacaagataaacaacttagtttctaatctcta 8846617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 260
Target Start/End: Complemental strand, 13953 - 13726
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac--- 133  Q
    ||||||||||||||| ||||||||||||  | ||  ||||||||||||||||||||||| || |||||||||| |||||| |||  || ||| ||||       
T  13953 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatc 13854  T
Q  134 tcaattat-caaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    |||| ||| || |  ||| ||| ||||||||||||||||||||| |||||||||  ||||| || |||||| |||||||||||||||||||| ||||  |    
T  13853 tcaaatattcatatataattcaagtaatgtatatacaattatatcacattataaacaacatcaaatcataaacatcagtcttactggaacatcaacataa 13754  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| |||||||||| |||||||    
T  13753 agataaacaacttagtttcttacctcta 13726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 251
Target Start/End: Complemental strand, 12288316 - 12288094
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagc 130  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||  ||||||||||| |||||| |||  || ||| |    
T  12288316 tcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccagttcatgatataacaatatcaaatgcaattcaac 12288217  T
Q  131 aac-tca-attatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaac 228  Q
    ||| ||| |  ||||||| ||| ||||||||||||||||||| ||||||||||||  |  |||||||| |||||    |||| ||||||| ||||  |||    
T  12288216 aacatcacaacatcaaacataattcatgtaatgtatatacaactatataacattaccaacaacattaaatcatataattcaggcttactgaaacaacaac 12288117  T
Q  229 agcaagttaaacatcttagtttc 251  Q
    |||||| |||||| |||||||||    
T  12288116 agcaagataaacaacttagtttc 12288094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 260
Target Start/End: Complemental strand, 43198661 - 43198428
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagc 130  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||||||| || |||||||| ||  |||||||||||  ||||| |||  || ||| |    
T  43198661 tcaacttagaccgactcatgcagcttagttaaataacaaacagcaacatagacaatatgcaaaacaattcatgatataaccatatcaaatgcaagtcatc 43198562  T
Q  131 aa---ctcaattat-caaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacatta 226  Q
    ||   ||||| ||| || |  ||| ||| ||||||||||||||||||||| |||||||||  ||||| |||||||| |||| |||||||||||||||| |    
T  43198561 aatatctcaaatattcatatataattcaagtaatgtatatacaattatatcacattataaacaacatcaattcatatgcattagtcttactggaacatca 43198462  T
Q  227 acagcaagttaaacatcttagtttctaacctcta 260  Q
    ||| |||| |||||| |||||||| | |||||||    
T  43198461 acaacaagataaacaacttagttttttacctcta 43198428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 39706395 - 39706242
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||| ||||||||||||| ||||||||||  || |||  |    
T  39706395 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatga 39706296  T
Q  132 actcaattatca--aacttaagtcatgtaatgtatatacaattatataacatta 183  Q
    ||   || | ||  ||| ||| ||||||||||||||||||||||||||||||||    
T  39706295 acatcataaacatcaacataattcatgtaatgtatatacaattatataacatta 39706242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 52243302 - 52243217
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatc 116  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||  ||||||||||| ||||||    
T  52243302 tcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcagttcatgatataacaatatc 52243217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 16377629 - 16377546
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| |||| || ||||| |||||||||||    
T  16377629 catcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa-cagcatgacataataatatc 16377546  T

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Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 7088881 - 7088975
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  7088881 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatc 7088975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 7798778 - 7798872
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  7798778 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatc 7798872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 52873484 - 52873390
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  52873484 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatc 52873390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 12902773 - 12902855
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  12902773 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatc 12902855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 16270352 - 16270259
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  |||||| |||||||||||||| ||||||| ||||||| ||   ||||||||||||||||| |||| || ||||| |||||||||||    
T  16270352 catcatcttcatcaagttagaccgactcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatc 16270259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 3096309 - 3096369
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  3096309 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa 3096369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 7893707 - 7893801
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  |||||||||||||||| |||| ||||||||||||||| ||   ||||||||||||||||| | ||| || ||||| |||||||||||    
T  7893707 catcatcttcatcaacttagaccgattcatgcagcttagttaaataaca-atagcaacataggcagtatacaaaaacagcatgacataataatatc 7893801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 6899895 - 6899988
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| || |||||||||||| ||   ||||||||||||||||| |||| || |||   |||||||||||    
T  6899895 catcatcttcatcaacttagaccgactcatgcatcttagttaaataaca-atagcaacataggcagtatacaaaacaacatagcataataatatc 6899988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 17046506 - 17046559
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||||| |||||    
T  17046506 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggtagtat 17046559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 19618323 - 19618240
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||| | ||||||| | ||| |||||||| |||||||||||    
T  19618323 atcaacttagaccgactcatgcagcttagttaaataaca-acagcaacaca-gcagtatacaaaaacatcatgacataataatatc 19618240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 22636439 - 22636484
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||    
T  22636439 catcatcttcatcaacttagaccgactcatgcagcttagttaaata 22636484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 23374464 - 23374404
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    ||||||||| |||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  23374464 caacttagaacgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa 23374404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 12458 - 12423
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  12458 atcaacttagaccgactcatgcagcttagttaaata 12423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 1837660 - 1837625
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  1837660 atcaacttagaccgactcatgcagcttagttaaata 1837625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 7641333 - 7641298
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  7641333 atcaacttagaccgactcatgcagcttagttaaata 7641298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 12610961 - 12610996
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  12610961 atcaacttagaccgactcatgcagcttagttaaata 12610996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 14280327 - 14280362
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  14280327 atcaacttagaccgactcatgcagcttagttaaata 14280362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 15118503 - 15118468
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  15118503 atcaacttagaccgactcatgcagcttagttaaata 15118468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 15355476 - 15355441
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  15355476 atcaacttagaccgactcatgcagcttagttaaata 15355441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 18215425 - 18215390
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  18215425 atcaacttagaccgactcatgcagcttagttaaata 18215390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 18239570 - 18239535
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  18239570 atcaacttagaccgactcatgcagcttagttaaata 18239535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 19242710 - 19242745
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  19242710 atcaacttagaccgactcatgcagcttagttaaata 19242745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 23803416 - 23803381
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  23803416 atcaacttagaccgactcatgcagcttagttaaata 23803381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 44052833 - 44052927
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||| ||||||||| ||||| ||||||||| ||  || ||||||||||||||| | ||| || ||||| |||||||||||    
T  44052833 catcatcttcatcaacttaggccgactcatgcagctcagttaaataaca-acatcaacataggcagtatacaaaaacagcatgacataataatatc 44052927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 44102225 - 44102260
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  44102225 atcaacttagaccgactcatgcagcttagttaaata 44102260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 44615299 - 44615334
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  44615299 atcaacttagaccgactcatgcagcttagttaaata 44615334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 44773238 - 44773203
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  44773238 atcaacttagaccgactcatgcagcttagttaaata 44773203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 44929031 - 44928996
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  44929031 atcaacttagaccgactcatgcagcttagttaaata 44928996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 50222490 - 50222455
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  50222490 atcaacttagaccgactcatgcagcttagttaaata 50222455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 51464019 - 51463984
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  51464019 atcaacttagaccgactcatgcagcttagttaaata 51463984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 52312521 - 52312556
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  52312521 atcaacttagaccgactcatgcagcttagttaaata 52312556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 6190481 - 6190531
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcag 87  Q
    ||||||||||||||| ||||||||||||| | ||  |||||||||||||||    
T  6190481 cttagaccgactcatgcagcttagttaaacatcaaacagcaacataggcag 6190531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 16240086 - 16239993
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  |||||||||||||| |||||| || |||| ||||||| ||   ||||| ||||||||||| |||| || ||||| |||||||||||    
T  16240086 catcatcttcatcaacttagaccaactcatgcaacttaattaaataacaat-agcaaaataggcagtatacaaaacagcatgacataataatatc 16239993  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 3515018 - 3515051
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaa 65  Q
    |||||||||||||||||||| |||||||||||||    
T  3515018 atcaacttagaccgactcatgcagcttagttaaa 3515051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 54798861 - 54798777
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| |||||||||| |||| ||  |||||||| | ||||||| | ||| || ||||| |||||||||||    
T  54798861 atcaacttagaccgactcatgcagcttagttgaataaca-acagcaacacaagcagtatacaaaaacagcatgacataataatatc 54798777  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 8574971 - 8574939
Alignment:
Q  35 aacttagaccgactcattcagcttagttaaata 67  Q
    ||||||||||||||||| |||||||||||||||    
T  8574971 aacttagaccgactcatgcagcttagttaaata 8574939  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 14038661 - 14038697
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaata 67  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  14038661 catcaacttagactgactcatgcagcttagttaaata 14038697  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 15099485 - 15099517
Alignment:
Q  152 tcatgtaatgtatatacaattatataacattat 184  Q
    |||| ||||||||||||||||||||||||||||    
T  15099485 tcatataatgtatatacaattatataacattat 15099517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 15190452 - 15190484
Alignment:
Q  152 tcatgtaatgtatatacaattatataacattat 184  Q
    |||| ||||||||||||||||||||||||||||    
T  15190452 tcatataatgtatatacaattatataacattat 15190484  T

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Target: chr2 (Bit Score: 162; Significance: 1e-86; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 23072054 - 23071849
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||| ||||||||| ||||||||||||||| |   || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23072054 caacttagtccgactcatgcagcttagttaaataacgaacaacaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 23071955  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaa 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||    
T  23071954 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagcaacattaattcataagcatcagtcttactggaacattagcaacaa 23071855  T
Q  234 gttaaa 239  Q
    | ||||    
T  23071854 ggtaaa 23071849  T

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Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 25175853 - 25176095
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||| || |||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  25175853 acatcatcatcatcaacttagacagattcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 25175952  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagca-tcagtcttac 216  Q
      |||||| |||   ||||| |||| ||| ||| |||| ||| ||||||| |||||||||||||||  |  |||||||  |||||   | |||| |||||    
T  25175953 gcaaatcaacaacatctcaaatatc-aacataattcatataacgtatatataattatataacattaacaacaacattagatcatattaattcaggcttac 25176051  T
Q  217 tggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    || ||||  ||||||||| |||||| ||||||||||||||||||    
T  25176052 tgaaacaacaacagcaagataaacaacttagtttctaacctcta 25176095  T

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Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 28405981 - 28406144
Alignment:
Q  23 atcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatcgaata 121  Q
    ||||||| ||||||||||||||||||||| || |||||||||||| ||  |||||||||||||||||||| ||| ||||||||||||| ||||||||||     
T  28405981 atcatcatcatcaacttagaccgactcatgcaacttagttaaataacaaacagcaacataggcagtatgcaaaatcatcatgatataacaatatcgaatg 28406080  T
Q  122 taaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
     |||||| |||   ||||| |||| ||||||| ||||  |||||||||||||||||||| |||||    
T  28406081 caaatcaacaacatctcaaatatc-aacttaattcataaaatgtatatacaattatataccatta 28406144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 22134323 - 22134093
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat- 120  Q
    |||||||| ||||| | ||||||||||||| ||||||||||||||| || | |||||||||||||||||||||| |||||| |||||| ||||||||||     
T  22134323 catcatcatcatcatcatagaccgactcatgcagcttagttaaatatcaac-agcaacataggcagtatgcaaatcatcataatataacaatatcgaatg 22134225  T
Q  121 --ataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactg 218  Q
      || ||| | || |||| ||||| ||| |||  ||| ||||||||||||        ||||||||||  ||||  |||||||| |||||||||||||||    
T  22134224 caatcaat-aacatctcatttatc-aacataatccatttaatgtatatac--------aacattataaacaacaccaattcatatgcatcagtcttactg 22134135  T
Q  219 gaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||| | | |||||||| |||||| ||||||||||||||||||    
T  22134134 gaaaaatgacagcaagataaacaacttagtttctaacctcta 22134093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 7679599 - 7679750
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||| ||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| |||||| ||| ||| ||| ||    
T  7679599 atcaacttagactgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatc-aatgtaagtcatca 7679697  T
Q  132 ac-tc--aattatcaaacttaagtcatgtaatgtatatacaattatataacat 181  Q
    || ||  ||  ||||||| ||| |||||||||||||||| |||||||||||||    
T  7679698 acatcataaacatcaaacataattcatgtaatgtatatataattatataacat 7679750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 18787009 - 18786854
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagc 130  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||| |||||||| |||||||||||||  ||||||||||| ||| || |||  || ||| |    
T  18787009 tcaacttagaccgactcatgcagcttagttaaataacaatcagtaacataggtagtatgcaaaccagttcatgatataacaatctcaaatgcaattcaac 18786910  T
Q  131 aac-tca-attatcaaacttaagtcatgtaatgtatatacaattatataacattat 184  Q
    ||| ||| |  ||||||| ||| ||||||||||||||||||| |||||||||||||    
T  18786909 aacgtcacaacatcaaacataattcatgtaatgtatatacaactatataacattat 18786854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 19671848 - 19671931
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaa 119  Q
    |||||||| ||||||| |||||||||||| || ||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19671848 acttagactgactcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatcgaa 19671931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 22459541 - 22459437
Alignment:
Q  156 gtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaac 255  Q
    ||||||||||||||||||||| |||||||||  ||||| || || ||  |||||||||||||| |||| |||||||||| |||||| |||||||||| ||    
T  22459541 gtaatgtatatacaattatatcacattataaataacatcaactcgtatacatcagtcttactgaaacaataacagcaagataaacaacttagtttcttac 22459442  T
Q  256 ctcta 260  Q
    |||||    
T  22459441 ctcta 22459437  T

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Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 23708725 - 23708642
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||||||  ||||||||||||||| ||   |||||||||||||||||||||| || |||||||||| ||||||    
T  23708725 tcaacttagaccgactcaagcagcttagttaaataacagatagcaacataggcagtatgcaaaacaacatgatataacaatatc 23708642  T

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Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 38219 - 38138
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| |||| || ||||| |||||||||||    
T  38219 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaacagcatgacataataatatc 38138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 22105423 - 22105507
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||| ||| || ||||| |||||||||||    
T  22105423 atcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatgcaaaaacagcatgacataataatatc 22105507  T

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Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 298922 - 298859
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  298922 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatacaaa 298859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 23060517 - 23060611
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  23060517 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacaacatgacataataatatc 23060611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 23285869 - 23285941
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  23285869 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa 23285941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 23076446 - 23076540
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  |||| |||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  23076446 catcatcttcatccacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatc 23076540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 7835 - 7756
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||| || |||| ||||||||||||  | ||  ||||||||||||||||||||||| || |||||||||| ||||||    
T  7835 cttagactgaatcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatc 7756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 22731351 - 22731257
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  |||||| |||||||||||||| ||||||||||||||| ||  |||||||||||||||| | | ||| || ||||| |||||||||||    
T  22731351 catcatcttcatcaagttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtttacaaaaacagcatgacataataatatc 22731257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 8946661 - 8946733
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||| ||| ||   ||||||||||||||||| ||||    
T  8946661 catcatcttcatcaacttagaccgactcatgcagcttagttagataaca-atagcaacataggcagtatacaaa 8946733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 20309127 - 20309180
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||||||||||| ||||||||||||||| ||   |||||||||||||||||    
T  20309127 cttagaccgactcatgcagcttagttaaataacaaatagcaacataggcagtat 20309180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 22337119 - 22337164
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||    
T  22337119 catcatcttcatcaacttagaccgactcatgcagcttagttaaata 22337164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 23040306 - 23040261
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||    
T  23040306 catcatcttcatcaacttagaccgactcatgcagcttagttaaata 23040261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 571408 - 571443
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  571408 atcaacttagaccgactcatgcagcttagttaaata 571443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 6726006 - 6726041
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  6726006 atcaacttagaccgactcatgcagcttagttaaata 6726041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 18808954 - 18808989
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  18808954 atcaacttagaccgactcatgcagcttagttaaata 18808989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 21155211 - 21155176
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  21155211 atcaacttagaccgactcatgcagcttagttaaata 21155176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 22738286 - 22738251
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  22738286 atcaacttagaccgactcatgcagcttagttaaata 22738251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 23103497 - 23103439
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaac 96  Q
    ||||||||||||||| |||||||||||||||  |  |||||||||||||||||| |||||    
T  23103497 cttagaccgactcatgcagcttagttaaata-aaaacagcaacataggcagtatacaaac 23103439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 23130873 - 23130908
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  23130873 atcaacttagaccgactcatgcagcttagttaaata 23130908  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 23133340 - 23133375
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  23133340 atcaacttagaccgactcatgcagcttagttaaata 23133375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 23135601 - 23135636
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  23135601 atcaacttagaccgactcatgcagcttagttaaata 23135636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 23654491 - 23654409
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa-ccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  || || ||||||||| || ||||  |||||||| |||||||||||    
T  23654491 caacttagaccgactcatgcagcttagttaaataaca-acaacagcataggcagcatacaaatacatcatgacataataatatc 23654409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 23660027 - 23660137
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaata 121  Q
    |||||||  |||||||||||||||||||||  | |||||||||| | ||  |||||||||||||||||| | || ||  |||| ||||||||||| |||     
T  23660027 catcatcttcatcaacttagaccgactcatgtatcttagttaaacaaca-acagcaacataggcagtatacgaaacaggatgacataataatatcaaatg 23660125  T
Q  122 taaatcagcaac 133  Q
     |||||| ||||    
T  23660126 caaatcaacaac 23660137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 23709683 - 23709648
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  23709683 atcaacttagaccgactcatgcagcttagttaaata 23709648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 23712164 - 23712129
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  23712164 atcaacttagaccgactcatgcagcttagttaaata 23712129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 24367785 - 24367820
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  24367785 atcaacttagaccgactcatgcagcttagttaaata 24367820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 24643101 - 24643066
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  24643101 atcaacttagaccgactcatgcagcttagttaaata 24643066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 26505390 - 26505425
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  26505390 atcaacttagaccgactcatgcagcttagttaaata 26505425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 26507868 - 26507903
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  26507868 atcaacttagaccgactcatgcagcttagttaaata 26507903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 28577110 - 28577145
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  28577110 atcaacttagaccgactcatgcagcttagttaaata 28577145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 32215072 - 32215037
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  32215072 atcaacttagaccgactcatgcagcttagttaaata 32215037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 34402673 - 34402638
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  34402673 atcaacttagaccgactcatgcagcttagttaaata 34402638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 38967385 - 38967420
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  38967385 atcaacttagaccgactcatgcagcttagttaaata 38967420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 39682324 - 39682359
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  39682324 atcaacttagaccgactcatgcagcttagttaaata 39682359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 43137310 - 43137345
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  43137310 atcaacttagaccgactcatgcagcttagttaaata 43137345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 45030005 - 45029970
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  45030005 atcaacttagaccgactcatgcagcttagttaaata 45029970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 23207296 - 23207377
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatc 116  Q
    ||||||||||||||| ||||||||||||  | ||  ||||||||||||||||||  ||| ||  ||||||||||| ||||||    
T  23207296 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatataaaacagttcatgatataacaatatc 23207377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 31 - 260
Target Start/End: Original strand, 6825 - 7054
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagc 130  Q
    ||||| ||||||||||||||| ||||| ||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||| ||||  |||||| |    
T  6825 catcatcttagaccgactcatgcagctcagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatattgaatgcaaatcaac 6924  T
Q  131 aactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacag 230  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||  |||||    
T  6925 aactcaaatatcaaacataagtcatgtaatgtatatacaattatataacattataaacaacattaattcatatgcatcagtcttactggaacaacaacag 7024  T
Q  231 caagttaaacatcttagtttctaacctcta 260  Q
    |||| |||||| ||||||||||||||||||    
T  7025 caagataaacaacttagtttctaacctcta 7054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 8140 - 8183
Alignment:
Q  140 atcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  8140 atcaaacataattcatgtaatgtatatacaattatataacatta 8183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 87 - 260
Target Start/End: Complemental strand, 2494 - 2321
Alignment:
Q  87 gtatgcaaaccatcatgatataataatatcgaatataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataa 186  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2494 gtatgcaaaccatcatgatataataatatcgaatgtaaatcagcaactcaattatcaaacttaagtcatttaatgtatatacaattatataacattataa 2395  T
Q  187 gaaacattaattcataagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||| |||| | ||||||||||||||||||    
T  2394 gcaacattaattcataagcatcagtcttactggaacattaatagcaaggtaaaaaacttagtttctaacctcta 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 73 - 260
Target Start/End: Complemental strand, 29346 - 29156
Alignment:
Q  73 cagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaatt 172  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29346 cagcaacataggtagtattcaaactatcatgatataataatatcgaatgtaaatcagcaactcaattatcaaacttaagtcatgtactgtatatacaatt 29247  T
Q  173 atataac---attataagaaacattaattcataagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||||||   |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  29246 atataacataattataagcaacattaattcataagcatcagtcttactggaacattaacagcaaggtaaacaacttagtttctaacctcta 29156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 260
Target Start/End: Complemental strand, 8180 - 7952
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagc 130  Q
    ||||||||||||||||||| ||||||||||||  | ||  |||||||||||||||||| |||||||  ||||||||||| |||||| |||| |||||| |    
T  8180 tcaacttagaccgactcatgcagcttagttaacaaacaaacagcaacataggcagtatacaaaccagttcatgatataacaatatcaaatacaaatcaac 8081  T
Q  131 aac-tca-attatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaac 228  Q
    ||| ||| |  |||| |  ||| ||||||||||||||||||| ||||||||||||| |  |||||||| |||||    |||| ||||||| |||   |||    
T  8080 aacatcacaacatcatatataattcatgtaatgtatatacaactatataacattatcaacaacattaaatcatataattcaggcttactgaaac---aac 7984  T
Q  229 agcaagttaaacatcttagtttctaacctcta 260  Q
    |||||| |||||| |||||||||| |||||||    
T  7983 agcaagataaacaacttagtttcttacctcta 7952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 8e-76; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 34 - 260
Target Start/End: Complemental strand, 13210432 - 13210205
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    |||||||||||||||||| ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  13210432 caacttagaccgactcatgcagcttagttaaataacaaatagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgcaaatcaacaac 13210333  T
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacatt-aattcataagcatcagtcttactggaacattaacagca 232  Q
    | || |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||||  |||||| ||    
T  13210332 ttaaatatcaaacataagtcatgtaatgtatatacaattatataacattataagcaacattgaattcatatgcatcagccttactggaatgttaacaaca 13210233  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| ||||||||||||||||||    
T  13210232 agataaacaacttagtttctaacctcta 13210205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 21 - 246
Target Start/End: Complemental strand, 12174377 - 12174152
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  12174377 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 12174278  T
Q  121 ataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactgga 220  Q
      ||| || |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||||| ||||||| |||||||||||||||||    
T  12174277 gcaaaacaacaactcaaatatcaaacataagtcatgtaatgtatatacaattatataacattataaacaacattgattcatatgcatcagtcttactgga 12174178  T
Q  221 acattaacagcaagttaaacatctta 246  Q
    |||  ||||||||| |||||| ||||    
T  12174177 acaacaacagcaagctaaacaactta 12174152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 16097331 - 16097573
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||  || ||||||||||| |||||||| |||||| |||||| ||||||||||    
T  16097331 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcaatatgcaaatcatcatcatataacaatatcgaat 16097430  T
Q  121 ataaatcagcaac---tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
      || ||| ||||   |||| |||||||| ||| |||||||||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||    
T  16097431 gcaagtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttact 16097530  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||||  ||||||||| |||||| |||||||||||| |||||    
T  16097531 ggaacaacaacagcaagataaacaacttagtttctaatctcta 16097573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 16103783 - 16104024
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| | |   ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  16103783 acatcatcatcatcaacttagaccgactcatgcagcttagttaaacaacgaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 16103882  T
Q  121 ataa--atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactg 218  Q
      ||  | || || ||||| |||||||| ||| |||| ||||||||||| ||||||||||||||||||  ||||| |||||||| | || ||||||||||    
T  16103883 gcaatcaacaacatctcaaatatcaaacataattcatttaatgtatataaaattatataacattataaacaacatcaattcatatggattagtcttactg 16103982  T
Q  219 gaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||||  ||||||||| |||||| ||||||||||||||||||    
T  16103983 gaacaacaacagcaagataaacaacttagtttctaacctcta 16104024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 260
Target Start/End: Original strand, 32307684 - 32307912
Alignment:
Q  25 catcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa 124  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||  ||    
T  32307684 catcatcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaa 32307783  T
Q  125 --atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaac 222  Q
      | || || |||||||||| ||| |||  ||| ||||||||||||        ||||||||||  ||||||||||||||||||||||||||||| ||||    
T  32307784 tcaacaacatctcaattatc-aacataatccatttaatgtatatac--------aacattataaacaacattaattcataagcatcagtcttactagaac 32307874  T
Q  223 attaacagcaagttaaacatcttagtttctaacctcta 260  Q
    | | |||||||| |||||| ||||||||||||||||||    
T  32307875 aatgacagcaagataaacaacttagtttctaacctcta 32307912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 183
Target Start/End: Original strand, 15470927 - 15471092
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  15470927 acatcatcatcttcaacttagaccgactcatgcagcttagttaaataacagacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 15471026  T
Q  121 ataa---atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
      ||   |||| || |||||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  15471027 gcaagtcatcaacatctcaaacatcaaacataattcatgtaatgtatatacaattatataacatta 15471092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 9512923 - 9513152
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||| | ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  9512923 acatcatcatcatcatcttagaccgactcatgcagcttagttaaacaacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 9513022  T
Q  121 ataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactgga 220  Q
       ||||| || |||| ||||| ||| |||  ||| |||||||        |||| ||||||||||  ||||| |||||||| |||||||||||||||||    
T  9513023 -gcaatcaacatctcatttatc-aacataatccatttaatgta--------tataaaacattataaacaacatcaattcatatgcatcagtcttactgga 9513112  T
Q  221 acattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||| ||||| |||| |||||| ||||||||||||||||||    
T  9513113 acaataacaacaaggtaaacaacttagtttctaacctcta 9513152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 9520898 - 9521127
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||| | ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  9520898 acatcatcatcatcatcttagaccgactcatgcagcttagttaaacaacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 9520997  T
Q  121 ataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactgga 220  Q
       ||||| || |||| ||||| ||| |||  ||| |||||||        ||||  |||||||||  ||||| |||||||| |||||||||||||||||    
T  9520998 -gcaatcaacatctcatttatc-aacataatccatttaatgta--------tataacacattataaacaacatcaattcatatgcatcagtcttactgga 9521087  T
Q  221 acattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||| ||||| |||| |||||| ||||||||||||||||||    
T  9521088 acaataacaacaaggtaaacaacttagtttctaacctcta 9521127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 133 - 260
Target Start/End: Complemental strand, 49389633 - 49389506
Alignment:
Q  133 ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    ||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||  |||| ||    
T  49389633 ctcaactatcaaacataattcatttaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacaaca 49389534  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| ||||||||||||||||||    
T  49389533 agataaacaacttagtttctaacctcta 49389506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 14234501 - 14234655
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||| || |||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||  || ||| ||    
T  14234501 atcaacttagactgattcatgcagcttagttaaataacaagcagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatca 14234600  T
Q  132 ac-tc--aattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
    || ||  ||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  14234601 acatcataaacatcaaacataattcatgtaatgtatatacaattatataacatta 14234655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 49668194 - 49667961
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  49668194 acatcatcatcatcatcttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 49668095  T
Q  121 ---ataaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
       || ||  | || |||| ||||| ||| |||  ||| ||| ||||||||        | |||||||   ||||| || ||||| ||||||||||||||    
T  49668094 gcaatcaacaaacatctcatttatc-aacataatccatttaaagtatatac--------agcattatatacaacatcaactcatatgcatcagtcttact 49668004  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||||| | |||||||| |||||| ||||||||||||||||||    
T  49668003 ggaacaatgacagcaagataaacaacttagtttctaacctcta 49667961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 260
Target Start/End: Complemental strand, 1644781 - 1644560
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagc 130  Q
    |||||||||||||| ||| ||   ||||||||||||| || | | |||||||||||||||||||| |||||| |||||| ||||||||||| || ||| |    
T  1644781 catcaacttagaccaacttatgttgcttagttaaataacaacaa-caacataggcagtatgcaaatcatcattatataacaatatcgaatacaa-tcaac 1644684  T
Q  131 aa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaa 227  Q
    ||   |||||||||||| | |||  ||| ||||||||||||||        ||||||||  ||||| |||||||| |||||||||||||||||||| |||    
T  1644683 aatatctcaattatcaa-cataatccatttaatgtatatacaa--------cattataaacaacatcaattcatatgcatcagtcttactggaacaataa 1644593  T
Q  228 cagcaagttaaacatcttagtttctaacctcta 260  Q
    || |||| |||||| ||||||||||||||||||    
T  1644592 caacaagataaacaacttagtttctaacctcta 1644560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 14572596 - 14572686
Alignment:
Q  25 catcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||  ||||||||||| |||||| |||| || ||||| |||||||||||    
T  14572596 catcaacatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacatagacagtatacaaaacagcatgacataataatatc 14572686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 23274705 - 23274788
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaa 119  Q
    |||||||| ||||||| || ||||||||| || ||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  23274705 acttagactgactcatgcaacttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatcgaa 23274788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 12934268 - 12934188
Alignment:
Q  180 attataagaaacattaattcataagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||||||  ||||| |||||||| |||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||    
T  12934268 attataaacaacatcaattcatatgcatcagtcttactggaacaatgacagcaagataaacaacttagtttctaacctcta 12934188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 53301658 - 53301574
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| || |||||||||||| ||  ||||||||||| ||||||||||| || |||||||||| ||||||    
T  53301658 atcaacttagaccgactcatacaacttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatc 53301574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 14576950 - 14576856
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||| ||||||  | | || ||||| |||||||||||    
T  14576950 acatcatcaacatcaacttagaccgactcattcaacttagttaaataaca-acagcaacatagacagtataaacaacagcatgacataataatatc 14576856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 24340826 - 24340743
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaa 119  Q
    |||||||| ||||||| |||||||||||| || ||  |||||||||| |||||||||| | |||||||||||||||||||||||    
T  24340826 acttagactgactcatgcagcttagttaattaacaatcagcaacatatgcagtatgcacaacatcatgatataataatatcgaa 24340743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 52523831 - 52523733
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagcaac 133  Q
    ||||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||| ||  ||||||||||| ||||||||||  |||||| ||||    
T  52523831 cttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaacagttcatgatataacaatatcgaatgcaaatcaacaac 52523733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 27165261 - 27165337
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatata 108  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||| |||| ||||||||||| || |||||||||    
T  27165261 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaatatagacagtatgcaaaacaacatgatata 27165337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 18438538 - 18438632
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| ||  |||||||||||||||||| | ||| || |||||||||||||||||    
T  18438538 catcatcttcatcaacttagaccgactcatgtagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgatataataatatc 18438632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 11424876 - 11424783
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||| ||||||| ||||||||||||||| ||  |||||||||||||||||| |||| || ||||| |||| ||||||    
T  11424876 catcatcttcatcaacttagactgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaacagcatgacataacaatatc 11424783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 20698552 - 20698480
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  20698552 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa 20698480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 37642368 - 37642287
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcg 117  Q
    |||| ||||||||||| |||||||||||  ||     ||||||||||||||||||||||| |||||||||||||||||||||    
T  37642368 acttggaccgactcatgcagcttagttagttaatgatcagcaacataggcagtatgcaaaacatcatgatataataatatcg 37642287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 14972858 - 14972969
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatcgaat 120  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||| ||||||||| | ||| || ||||| ||||||||||| |||    
T  14972858 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacacaggcagtatacaaaaacagcatgacataataatatcaaat 14972956  T
Q  121 ataaatcagcaac 133  Q
      |||||| ||||    
T  14972957 gcaaatcaacaac 14972969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 12399225 - 12399307
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  12399225 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaatcagcatgacataataatatc 12399307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 13442278 - 13442372
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  | |||||||||||||||| | ||| || ||||| |||||||||||    
T  13442278 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acggcaacataggcagtatacaaaaacaacatgacataataatatc 13442372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 23083478 - 23083406
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||   ||||||||||||||||| ||||    
T  23083478 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-atagcaacataggcagtatacaaa 23083406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 24153315 - 24153232
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| ||||||||||||||| |    ||||||||||| ||||| |||| || ||||| |||||||||||    
T  24153315 atcaacttagaccgactcatgcagcttagttaaataac-gatagcaacataggtagtatacaaaacagcatgacataataatatc 24153232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 26686902 - 26686985
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    ||||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| | ||| || ||||| |||||||||||    
T  26686902 tcaacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaaaacagcatgacataataatatc 26686985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 17487860 - 17487954
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||| |||| |||||| | ||| || ||||| |||||||||||    
T  17487860 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaaaatagacagtatacaaaaacagcatgacataataatatc 17487954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 17499342 - 17499436
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||| |||| |||||| | ||| || ||||| |||||||||||    
T  17499342 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaaaatagacagtatacaaaaacagcatgacataataatatc 17499436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 28194704 - 28194755
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacatag 83  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||||||    
T  28194704 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacatag 28194755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 252
Target Start/End: Complemental strand, 37251270 - 37251051
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagcaac- 133  Q
    |||||||||| |||| ||||||||||||  | ||  ||||||||||||||||||  ||| ||  ||||||||||| |||||| |||  |||||| ||||     
T  37251270 cttagaccgagtcatgcagcttagttaataaacaaacagcaacataggcagtatataaaacagttcatgatataacaatatcaaatgcaaatcaacaaca 37251171  T
Q  134 --tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagc 231  Q
      ||||  |||| |  ||| |||||||||| ||||||| |||||| ||||||| |  ||||| || |||||    |||| ||||||||||||  |||||     
T  37251170 tctcaac-atcataaataattcatgtaatgcatatacatttatatcacattattaacaacatcaaatcatataattcagacttactggaacaacaacagt 37251072  T
Q  232 aagttaaacatcttagtttct 252  Q
    ||| |||||| ||||||||||    
T  37251071 aagataaacaacttagtttct 37251051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 9707758 - 9707601
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatcgaatataaatcagc 130  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||| | ||||||| | ||| || ||||| ||||||||||| |||| || ||| |    
T  9707758 atcaacttagaccgactcatgcagcttagttaaataaca-acagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatacaagtcaac 9707661  T
Q  131 aa---ctcaatta-tcaaacttaagtcatgtaatgtatatacaattatataacattataa 186  Q
    ||   |||||||| ||| |  ||| ||| |||||| |||||||||||||| ||| |||||    
T  9707660 aacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacaatataa 9707601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 22147591 - 22147547
Alignment:
Q  73 cagcaacataggcagtatgcaaaccatcatgatataataatatcg 117  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||    
T  22147591 cagcaacgtaggcggtatgcaaaacatcatgatataataatatcg 22147547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 36166609 - 36166691
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||| ||| | ||||||| |||| || ||||| |||||||||||    
T  36166609 atcaacttagaccgactcatgcagcttagttaaataaca-acagcgacaca-gcagtatacaaaacagcatgacataataatatc 36166691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 6469285 - 6469250
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  6469285 atcaacttagaccgactcatgcagcttagttaaata 6469250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 7781498 - 7781463
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  7781498 atcaacttagaccgactcatgcagcttagttaaata 7781463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 8499529 - 8499564
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  8499529 atcaacttagaccgactcatgcagcttagttaaata 8499564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 10247874 - 10247839
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  10247874 atcaacttagaccgactcatacagcttagttaaata 10247839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 10556996 - 10557031
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  10556996 atcaacttagaccgactcatgcagcttagttaaata 10557031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 12567571 - 12567606
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  12567571 atcaacttagaccgactcatgcagcttagttaaata 12567606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 13544036 - 13544071
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  13544036 atcaacttagaccgactcatgcagcttagttaaata 13544071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 15412440 - 15412475
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  15412440 atcaacttagaccgactcatgcagcttagttaaata 15412475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 15977526 - 15977561
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  15977526 atcaacttagaccgactcatgcagcttagttaaata 15977561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 16282962 - 16282927
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  16282962 atcaacttagaccgactcatgcagcttagttaaata 16282927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 17463189 - 17463224
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  17463189 atcaacttagaccgactcatgcagcttagttaaata 17463224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 17672637 - 17672672
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  17672637 atcaacttagaccgactcatgcagcttagttaaata 17672672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 17737247 - 17737282
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  17737247 atcaacttagaccgactcatgcagcttagttaaata 17737282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 21618460 - 21618495
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  21618460 atcaacttagaccgactcatgcagcttagttaaata 21618495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 28848762 - 28848727
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  28848762 atcaacttagaccgactcatgcagcttagttaaata 28848727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 29172734 - 29172699
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  29172734 atcaacttagaccgactcatgcagcttagttaaata 29172699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 34159337 - 34159372
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  34159337 atcaacttagaccgactcatgcagcttagttaaata 34159372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 38962042 - 38962007
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  38962042 atcaacttagaccgactcatgcagcttagttaaata 38962007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 41123901 - 41123936
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  41123901 atcaacttagaccgactcatgcagcttagttaaata 41123936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 42386428 - 42386486
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||||||||||| ||| ||||||||||| ||  |||||||||||||||||| ||||    
T  42386428 acttagaccgactcatgcagtttagttaaataaca-acagcaacataggcagtatacaaa 42386486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 45577989 - 45577954
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  45577989 atcaacttagaccgactcatgcagcttagttaaata 45577954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 45607058 - 45607023
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  45607058 atcaacttagaccgactcatgcagcttagttaaata 45607023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 50242833 - 50242868
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  50242833 atcaacttagaccgactcatgcagcttagttaaata 50242868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 55476502 - 55476537
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  55476502 atcaacttagaccgactcatgcagcttagttaaata 55476537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 55500953 - 55500988
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  55500953 atcaacttagaccgactcatgcagcttagttaaata 55500988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 43840945 - 43841030
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||| |||||||||| ||||||||||||||| ||  || |||||||| |||||| | ||| || ||||| |||||||||||    
T  43840945 catcaacttaaaccgactcatgcagcttagttaaataaca-acaacaacatagacagtatacaaaaacagcatgacataataatatc 43841030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 1465395 - 1465363
Alignment:
Q  152 tcatgtaatgtatatacaattatataacattat 184  Q
    ||||||||||||||||||||| |||||||||||    
T  1465395 tcatgtaatgtatatacaattgtataacattat 1465363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 22110454 - 22110402
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagta 89  Q
    ||||||||||||||| ||||||||||||  | ||  |||||||||||||||||    
T  22110454 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 22110402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 43925977 - 43926029
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagta 89  Q
    ||||||||||||||| ||||||||||||  | ||  |||||||||||||||||    
T  43925977 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 43926029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 45910 - 45668
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||  ||| || |||||||||||||||| ||||||||||||| ||||||||||    
T  45910 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacagaaaaataggcagtatgcaaatcatcatgatataacaatatcgaat 45811  T
Q  121 ataaatcagcaac---tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
     ||| ||| ||||   ||||||||||||| ||| |||||| ||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||    
T  45810 gtaagtcatcaacatctcaattatcaaacataattcatgtgatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttact 45711  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||||| | |||||||  |||||| ||||||||||||||||||    
T  45710 ggaacaattacagcaatataaacaacttagtttctaacctcta 45668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 129908 - 130150
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||| ||| ||||||||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  129908 acatcttcatcatcaacttagaccgactcatgcatcttagttaaataacacacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 130007  T
Q  121 ataaatcagcaac---tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
      || ||| ||||   |||| |||||||| ||| ||||||||||||||||||||||||||||||| |||  ||||| |||||||| ||||||||||||||    
T  130008 gcaagtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattgtaaacaacatcaattcatatgcatcagtcttact 130107  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||||  ||||||||| |||||| ||||||||||||||||||    
T  130108 ggaacaacaacagcaagataaacaacttagtttctaacctcta 130150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 33 - 260
Target Start/End: Complemental strand, 10647 - 10417
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa 132  Q
    |||||||||||||||| || ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||  || ||| |||    
T  10647 tcaacttagaccgacttatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaa 10548  T
Q  133 c---tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaaca 229  Q
    |   |||| |||||||| ||| |||||||||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||  ||||    
T  10547 catctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaaca 10448  T
Q  230 gcaagttaaacatcttagtttctaacctcta 260  Q
     |||| |||||| ||||||||||||||||||    
T  10447 acaagataaacaacttagtttctaacctcta 10417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 260
Target Start/End: Original strand, 160685 - 160928
Alignment:
Q  19 ggacatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcga 118  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| |||||| |    
T  160685 ggacatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaatcagcaacataggcagtatgcaaatcatcatgatataacaatatcaa 160784  T
Q  119 atataaatcagcaac---tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtctta 215  Q
    ||  || ||| ||||   |||| |||||||| ||||||||||||| |||||||||||||||||||||||||  ||||| |||||||| ||||||||||||    
T  160785 atgcaa-tcaacaacatgtcaaatatcaaacataagtcatgtaatatatatacaattatataacattataaacaacatcaattcatatgcatcagtctta 160883  T
Q  216 ctggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    | | ||||  |||| |||| |||||| ||||||||||||||||||    
T  160884 ccgaaacaacaacaacaagataaacaacttagtttctaacctcta 160928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 501095 - 501130
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  501095 atcaacttagaccgactcatgcagcttagttaaata 501130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 37 - 186
Target Start/End: Complemental strand, 1171 - 1022
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaactca 136  Q
    ||||||||||||||| ||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  1171 cttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaactca 1072  T
Q  137 attatcaaacttaagtcatgtaatgtatatacaattatataacattataa 186  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1071 attatcagacttaagtcatgtaatgtatatacaattatataacattataa 1022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 132 - 373
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||| | ||  || |||||||||||||||||||| ||||||||||||| ||||||||||    
T  132 acatcatcatcatcaacttagaccgattcatgcagcttagttaaacaacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaat 231  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
      |||||| |||   ||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||  ||||| |||||||| | |||||||| |||    
T  232 gcaaatcaacaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataatattataaacaacatcaattcatatgtatcagtctcact 331  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
     |||||  ||||||||| | |||| || |||||||||||||||    
T  332 agaacaacaacagcaagat-aacaactcagtttctaacctcta 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 22788 - 22550
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||||| ||  |||| |||||| ||||||||||| ||||||||||||| ||||||||||    
T  22788 acatcatcaccttcaacttagaccgactcatgcagcttagttaaataacaaacagcgacatagacagtatgcaaatcatcatgatataacaatatcgaat 22689  T
Q  121 ataa---atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
      ||   |||| || ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||  ||||| |    ||| ||||||||||||||    
T  22688 gcaagtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataacattataaacaacatca----atatgcatcagtcttact 22593  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||||  |||| ||||  ||||| ||||||||||||||||||    
T  22592 ggaacagcaacatcaagacaaacaacttagtttctaacctcta 22550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 32 - 260
Target Start/End: Original strand, 1096 - 1327
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||| ||||||||||||| ||||||||||| |  ||| ||    
T  1096 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatacaggtcatca 1195  T
Q  132 ac---tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaac 228  Q
    ||   ||||  ||||||| ||| ||||| ||||||||||||| ||||||||||||  |  ||||| || |||||  |||||||||||||||||||  |||    
T  1196 acatttcaaacatcaaacataattcatggaatgtatatacaactatataacattaacaacaacatcaaatcatatacatcagtcttactggaacaacaac 1295  T
Q  229 agcaagttaaacatcttagtttctaacctcta 260  Q
    | |||| |||| | |||||||||| |||||||    
T  1296 aacaagataaaaaacttagtttcttacctcta 1327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 90; Significance: 1e-43; HSPs: 7)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 100377 - 100619
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  100377 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataataatatcgaat 100476  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagca-tcagtcttac 216  Q
      |||||| |||   ||||| |||  ||| ||| |||| |||||||||||||||||||||||||||  |  |||||||  |||||   | | || |||||    
T  100477 gcaaatcaacaacatctcaaatat-taacataattcatataatgtatatacaattatataacattaacaacaacattagatcatattaatttaggcttac 100575  T
Q  217 tggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    || ||||  |||| |||| |||||| ||||||||||||||||||    
T  100576 tgaaacaacaacaacaagataaacaacttagtttctaacctcta 100619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 40292 - 40050
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |  ||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  40292 acatcatcatcatcaacttagactgactcatgcagcttagttaaataataaacagcaacataggcagtaggcaaatcatcatgatataacaatatcgaat 40193  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagca-tcagtcttac 216  Q
      |||||| |||   ||||| |||| ||| ||| |||| ||||||||||||||||||||| |||||  |  ||||| |  |||||   | |||| |||||    
T  40192 gcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataccattaacaacaacataagatcatattaattcaggcttac 40094  T
Q  217 tggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    || ||||  |||| |||| |||||| ||||||||||||||||||    
T  40093 tgaaacaacaacatcaaggtaaacaacttagtttctaacctcta 40050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 101502 - 101580
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccat 99  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||| | ||  || ||||||||||||||||||||||||    
T  101502 acatcatcatcatcaacttagaccgattcatgcagcttagttaaacaacaaacaacaacataggcagtatgcaaaccat 101580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 119891 - 119948
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatg 91  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||    
T  119891 caacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatg 119948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 17591 - 17556
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  17591 atcaacttagaccgactcatgcagcttagttaaata 17556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 44465 - 44500
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  44465 atcaacttagaccgactcatgcagcttagttaaata 44500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 94422 - 94457
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  94422 atcaacttagaccgactcatgcagcttagttaaata 94457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 19267 - 19509
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  19267 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 19366  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcata-agcatcagtcttac 216  Q
      |||||| |||   ||||| |||| ||| ||| |||| ||||||||||||||||||||| |||||  |  |||||||  |||||    |||||  ||||    
T  19367 gcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataccattaacaacaacattagatcatattaaatcagggttac 19465  T
Q  217 tggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    || ||||  |||| |||| |||||| ||||||||||||||||||    
T  19466 tgaaacaacaacatcaagataaacaacttagtttctaacctcta 19509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 6539 - 6702
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaata 121  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||     
T  6539 catcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatg 6638  T
Q  122 taaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
     |||||| |||   ||||| |||| ||| ||| |||| ||||||||||||||||||||| |||||    
T  6639 caaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataccatta 6702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 260
Target Start/End: Original strand, 8481 - 8714
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa---atcag 129  Q
    ||||||||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||| || |||||||||| |||||| |||  ||   ||||     
T  8481 tcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaa 8580  T
Q  130 caactcaatta-tcaaacttaagtcatgtaatgtatataca--attatataacattataagaaacattaattcataagcatcagtcttactggaacatta 226  Q
    || ||||| || ||| |  ||| ||| ||||||||||||||  ||||||| |||||||||  ||||| ||||||||  |||||||||||||||||||  |    
T  8581 catctcaaatattcatatataattcaagtaatgtatatacaatattatatcacattataaacaacatcaattcatatacatcagtcttactggaacaaca 8680  T
Q  227 acagcaagttaaacatcttagtttctaacctcta 260  Q
     ||||||| |||||| |||||||||| |||||||    
T  8681 tcagcaagataaacaacttagtttcttacctcta 8714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 12770 - 13011
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaata 121  Q
    |||||| | ||||||||||||||||||||| |||||||| |||||| ||  || ||||||||||| |||||||| ||||||||||||| ||||||||||     
T  12770 catcataatcatcaacttagaccgactcatgcagcttagctaaataacaaacaacaacataggcaatatgcaaatcatcatgatataacaatatcgaatg 12869  T
Q  122 taaatcagcaac-tc--aattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactg 218  Q
     || ||| |||| ||  ||  ||||||| ||| ||||||||||||||||||||||||||||||||  |  |||||||  |||||    |||| |||||||    
T  12870 caagtcatcaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattaataacaacattagatcatataattcaggcttactg 12969  T
Q  219 gaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||||  ||||||||| |||||  ||||||||||||||||||    
T  12970 gaacaacaacagcaagataaaccacttagtttctaacctcta 13011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 80; Significance: 1e-37; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 62202 - 62440
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaata 121  Q
    |||||||| | || ||||| |||||||||| ||||||||||||| | ||  ||||||||||||||||||| ||| ||||||| ||||||||||||||||     
T  62202 catcatcatcttcgacttaaaccgactcatgcagcttagttaaacaacaaacagcaacataggcagtatgaaaaacatcatggtataataatatcgaatg 62301  T
Q  122 taaatcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagca-tcagtcttactgga 220  Q
     | | || || ||||| |||| ||| ||| |||| |||||||||||||||||||||||||||  |  | ||||| |||||||  | |||| ||||||| |    
T  62302 cacaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataacattaacaacatcattagttcataacaattcaggcttactgaa 62400  T
Q  221 acattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||  ||||||||| |||||| ||||||||||||||||||    
T  62401 acaacaacagcaagataaacaacttagtttctaacctcta 62440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 132661 - 132896
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaac-catcatgatataataatatcgaa 119  Q
    ||||||||| ||||| ||||||||||||||| |||||||| |||||| ||  |||||||||| | ||||||||||  |||||||||| || |||||||||    
T  132661 acatcatcatcatcatcttagaccgactcatgcagcttagataaataacaaacagcaacataagtagtatgcaaaatcatcatgatacaacaatatcgaa 132760  T
Q  120 tataa--atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
    | |||  |||| |  |||||||||||| | |||  ||| |||||||||||      || ||||||||||  ||||| |||||||| ||||||||||||||    
T  132761 tgtaatcatcaacgtctcaattatcaa-cataatccatttaatgtatata------tacaacattataaacaacatcaattcatatgcatcagtcttact 132853  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||||  ||||| ||| |||||| ||||||||||||||||||    
T  132854 ggaacaacaacagtaagataaacaacttagtttctaacctcta 132896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 136691 - 136726
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  136691 atcaacttagaccgactcatgcagcttagttaaata 136726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 139160 - 139195
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  139160 atcaacttagaccgactcatgcagcttagttaaata 139195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 144098 - 144133
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  144098 atcaacttagaccgactcatgcagcttagttaaata 144133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 14815 - 14573
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| || ||  ||||||||||||||||| | ||| |||||||||||| |||||||||||    
T  14815 acatcatcatcatcaacttagaccgactcatgcagcttagttaactaacaaacagcaacataggcagtaagaaaatcatcatgatatagtaatatcgaat 14716  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcata-agcatcagtcttac 216  Q
      |||||| |||   ||||| |||| ||| ||| |||| |||||||||||| |||||||| |||||  | ||||||||  |||||    ||||| |||||    
T  14715 gcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatactattatataccattaacaaaaacattagatcatattaaatcaggcttac 14617  T
Q  217 tggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    || ||||  ||||||||| || ||| ||||||||||||||||||    
T  14616 tgaaacaacaacagcaagatatacaacttagtttctaacctcta 14573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 258
Target Start/End: Complemental strand, 6230 - 6001
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| ||||||||||||||| ||  ||| ||||||||||||||||||| ||||||||||||| ||||||||||  || |||  |    
T  6230 atcaacttagaccgactcatgcagcttagttaaataacaaacagtaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatta 6131  T
Q  132 ac-tc--aattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaac 228  Q
    || ||  ||  ||||||| ||| ||||||||||||||||||||||||||||||||  |  |||||||  | |||    |||| ||||||| |||| ||||    
T  6130 acatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaataac 6031  T
Q  229 agcaagttaaacatcttagtttctaacctc 258  Q
    |||||| |||| | |||||||| |||||||    
T  6030 agcaagataaataacttagtttttaacctc 6001  T

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Target: scaffold0150 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 32101 - 32336
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaac-catcatgatataataatatcgaa 119  Q
    ||||||||| ||||| ||||||||||||||| |||||||| |||||| ||  || ||||||| | ||||||||||  ||||||||||||| |||||||||    
T  32101 acatcatcatcatcatcttagaccgactcatgcagcttagataaataacaaacaacaacataagtagtatgcaaaatcatcatgatataacaatatcgaa 32200  T
Q  120 tataa--atcagcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttact 217  Q
    | |||  |||| |  |||||||||||| | |||  ||| |||||||||||      || ||||||||||  ||||| |||||||| ||||||||||||||    
T  32201 tgtaatcatcaacgtctcaattatcaa-cataatccatttaatgtatata------tacaacattataaacaacatcaattcatatgcatcagtcttact 32293  T
Q  218 ggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||||  ||||| ||| |||||| ||||||||||||||||||    
T  32294 ggaacaacaacagtaagataaacaacttagtttctaacctcta 32336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 260
Target Start/End: Original strand, 32551 - 32780
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa--atcagc 130  Q
    ||||||||||||||||||| ||||||||||||  | ||  ||||||||||||||||||||||| || |||||||||| |||||| |||  ||  | || |    
T  32551 tcaacttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaatcaacaac 32650  T
Q  131 aactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacag 230  Q
    | |||||  ||||||| ||| ||||||||||||||||||| ||||||||||||  | ||||||||  | |||    |||| ||||||| |||| |||||     
T  32651 atctcaaacatcaaacataattcatgtaatgtatatacaactatataacattaacaaaaacattagattatataattcaggcttactgaaacaataacaa 32750  T
Q  231 caagttaaacatcttagtttctaacctcta 260  Q
    |||| |||||| |||||||||| |||||||    
T  32751 caagataaacaacttagtttcttacctcta 32780  T

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Target: scaffold0278 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 183
Target Start/End: Original strand, 5656 - 5810
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagc 130  Q
    ||||||||||||||||||||| ||||||||| ||||| ||  ||||||||||||||||||| ||| ||||||||||||| ||||||||||  |||||| |    
T  5656 catcaacttagaccgactcatgcagcttagtaaaataacaaacagcaacataggcagtatgaaaatcatcatgatataacaatatcgaatgcaaatcaac 5755  T
Q  131 aa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
    ||   ||||| |||| ||| ||| |||| ||||||||||||||||||||| |||||    
T  5756 aacatctcaaatatc-aacataattcatataatgtatatacaattatataccatta 5810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 2763 - 2521
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||  || |||||||||||||||| ||| ||||||| ||||| ||||| ||||    
T  2763 acatcatcatcatcaacttagaccgactcatgcagcttagttaaataacaaacatcaacataggcagtatgtaaatcatcatgttataacaatattgaat 2664  T
Q  121 ataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagca-tcagtcttac 216  Q
      |||||| |||   ||||| |||| ||| ||| |||| ||||||||||||||||||||| |||||  |  |||||||  |||||   | |||| |||||    
T  2663 gcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttac 2565  T
Q  217 tggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    || ||||  | ||||||| |||||| |||| |||||||||||||    
T  2564 tgaaacaacatcagcaagataaacaacttaatttctaacctcta 2521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 260
Target Start/End: Complemental strand, 53651 - 53424
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac--- 133  Q
    ||||||| || |||| ||||||||||||  | ||  ||||||||||||||||||||||| || |||||||||| |||||| |||  || ||| ||||       
T  53651 cttagactgattcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatc 53552  T
Q  134 tcaattat-caaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    |||| ||| || |  ||| ||| ||||||||||||||||||||| |||||||||  ||||| || |||||| |||||||||||||||||||| ||||  |    
T  53551 tcaaatattcatatataattcaagtaatgtatatacaattatatcacattataaacaacatcaaatcataaacatcagtcttactggaacatcaacataa 53452  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| |||||||||| |||||||    
T  53451 agataaacaacttagtttcttacctcta 53424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 260
Target Start/End: Original strand, 10542 - 10772
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa---atcag 129  Q
    ||||||||||||||||||| ||||||  ||||||| ||  || |||||||||||||||||||| ||||||||||||| ||||||||||  ||   ||||     
T  10542 tcaacttagaccgactcatgcagcttttttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaa 10641  T
Q  130 caactcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaaca 229  Q
    || |||||  ||| ||| ||| ||||||||||||||||||||||||| ||||||  |  |||||||  | |||    |||| ||||||| ||||  ||||    
T  10642 catctcaaacatcgaacataattcatgtaatgtatatacaattatatgacattaacaacaacattagattatataattcaggcttactgaaacaacaaca 10741  T
Q  230 gcaagttaaacatcttagtttctaacctcta 260  Q
    ||||| |||||| |||||||||| |||||||    
T  10742 gcaagataaacaacttagtttcttacctcta 10772  T

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Target: scaffold0333 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 6625 - 6779
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa---atca 128  Q
    |||||||||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||| ||| ||||||||| ||||||||||  ||   ||||    
T  6625 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaatcatgatgatataacaatatcgaatgcaagttatca 6724  T
Q  129 gcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
     ||    ||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  6725 tcattataaacatcaaacataattcatgtaatgtatatacaattatataacatta 6779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 14005 - 14159
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa---atca 128  Q
    |||||||||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||| ||| ||||||||| ||||||||||  ||   ||||    
T  14005 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaatcatgatgatataacaatatcgaatgcaagttatca 14104  T
Q  129 gcaactcaattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
     ||    ||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  14105 tcattataaacatcaaacataattcatgtaatgtatatacaattatataacatta 14159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 1141 - 987
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagca 131  Q
    |||||||||||||||||||| ||||||||||||||| ||  || ||||||||| |||||||| | ||||||||||||| || |||||||  || ||| ||    
T  1141 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggtagtatgcagatcatcatgatataacaacatcgaatgcaagtcatca 1042  T
Q  132 ac-tc--aattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
    || ||  ||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  1041 acatcataaacatcaaacataattcatgtaatgtatatacaattatataacatta 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 24001 - 23902
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| | |||||||||||||||||||  |||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  24001 acatcatcatcttcaacttagaccgactcatgtagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaat 23902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 183
Target Start/End: Original strand, 12942 - 13107
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| | ||||||||||||||||||| | ||| ||||||||| ||  || |||||||||||||||||||| || |||||||||| ||||||||||    
T  12942 acatcatcatcttcaacttagaccgactcatgctgctcagttaaataacaaacaacaacataggcagtatgcaaatcagcatgatataacaatatcgaat 13041  T
Q  121 ataaatcagcaac-tc--aattatcaaacttaagtcatgtaatgtatatacaattatataacatta 183  Q
      || ||| |||| ||  ||  ||||||| ||| || |||||||||||||||||||||||||||||    
T  13042 gcaagtcatcaacatcataaacatcaaacataattcgtgtaatgtatatacaattatataacatta 13107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 2924 - 2812
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||| ||  |||| |||||||||||||||||| ||||||||||||| |||||| |||    
T  2924 acatcatcatcatcatcttagaccgactcatgcagcttagttaaataacaaacagctacataggcagtatgcaaatcatcatgatataacaatatcaaat 2825  T
Q  121 ataaatcagcaac 133  Q
      |||||| ||||    
T  2824 gcaaatcaacaac 2812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 2734 - 2680
Alignment:
Q  206 atcagtcttactggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||| ||||||| ||||  ||||||||| |||||| ||||||||||||||||||    
T  2734 atcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctcta 2680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 172 - 260
Target Start/End: Complemental strand, 28775 - 28687
Alignment:
Q  172 tatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||||||||||||||  ||||| |||||||| |||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||    
T  28775 tatataacattataaacaacatcaattcatatgcatcagtcttactggaacaatgacagcaagataaacaacttagtttctaacctcta 28687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 28888 - 28806
Alignment:
Q  21 acatcatcaacatcaacttagaccgactcattcagcttagttaaatacca-cccagcaacataggcagtatgcaaaccatcat 102  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| | ||   ||||||||||||||||||||||| ||||||    
T  28888 acatcatcatcatcaacttagaccgactcatgcagcttagttaaacaacattacagcaacataggcagtatgcaaatcatcat 28806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 15884 - 15796
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    |||||||||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||| ||| ||||||||| ||||||||||    
T  15884 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaatcatgatgatataacaatatcgaat 15796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 1051 - 1135
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaata 121  Q
    ||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| || |||||||||| |||||| ||||    
T  1051 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaata 1135  T

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Target: scaffold0540 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 3267 - 3174
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| |||| || ||||| |||||||||||    
T  3267 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaacaacatgacataataatatc 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 11482 - 11563
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcg 117  Q
    |||||||  ||||||| |||||||||||| || ||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  11482 acttagattgactcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatcg 11563  T

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Target: scaffold0124 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 38359 - 38278
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcg 117  Q
    |||||||  ||||||| |||||||||||| || ||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  38359 acttagattgactcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatcg 38278  T

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Target: scaffold0908 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 3303 - 3192
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatcgaat 120  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||||||||||||||| |||    
T  3303 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgatataataatatcaaat 3205  T
Q  121 ataaatcagcaac 133  Q
     ||| ||| ||||    
T  3204 gtaattcaacaac 3192  T

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Target: scaffold0413 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 260
Target Start/End: Original strand, 12587 - 12813
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataa---atcagcaac 133  Q
    |||||||||||||||  |||||||||||  | ||  ||||||||||||||||||||||| || |||||||||| |||||| |||  ||   |||| || |    
T  12587 cttagaccgactcatgtagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatc 12686  T
Q  134 tcaatta-tcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
    |||| || | | |  ||| ||| ||||||||||||||||||||| |||||||||  ||||| || | |||  ||| || ||||||| ||||  |||||||    
T  12687 tcaaatacttatatataattca-gtaatgtatatacaattatatcacattataaacaacatcaaataatacacattagacttactgaaacaacaacagca 12785  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| |||||||| | |||||||    
T  12786 agataaacaacttagtttattacctcta 12813  T

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Target: scaffold0141 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 39490 - 39574
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| |||| || ||||| |||||||||||    
T  39490 catcaacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaaacagcatgacataataatatc 39574  T

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Target: scaffold0049 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 75322 - 75238
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| |||| || ||||| |||||||||||    
T  75322 catcaacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaaacagcatgacataataatatc 75238  T

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Target: scaffold0357 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 16206 - 16106
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa 132  Q
    ||||||||||||||||||| ||||||||||||  | ||  || ||||||||| |||||||||| || |||||||||| |||||| ||| ||||||| |||    
T  16206 tcaacttagaccgactcatgcagcttagttaataaacaaacaacaacataggtagtatgcaaaacaacatgatataacaatatcaaatgtaaatcaacaa 16107  T
Q  133 c 133  Q
    |    
T  16106 c 16106  T

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Target: scaffold0357; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 13147 - 13243
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaac 133  Q
    ||||||||||||||| ||||||||||||  | ||  || |||||||||||||||||||| || |||||||||| |||||| |||  |||||| ||||    
T  13147 cttagaccgactcatgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaaatcaacaac 13243  T

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Target: scaffold0165 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 27855 - 27755
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa 132  Q
    ||||||||||||||||||| ||||||||||||  | ||  || ||||||||| |||||||||| || |||||||||| |||||| ||| ||||||| |||    
T  27855 tcaacttagaccgactcatgcagcttagttaataaacaaacaacaacataggtagtatgcaaaacagcatgatataacaatatcaaatgtaaatcaacaa 27756  T
Q  133 c 133  Q
    |    
T  27755 c 27755  T

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Target: scaffold0074 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 38809 - 38725
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||| |||||| || |||||||||||| ||  ||||||||||| ||||||||||| || |||||||||| ||||||    
T  38809 atcaacttagacctactcatgcaccttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatc 38725  T

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Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 340053 - 339972
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||||||| |||||||||||||||  || || ||||||||||||||| |||| || ||||| |||||||||||    
T  340053 tcaacttagaccgactcatgcagcttagttaaata--acacaacaacataggcagtatacaaaacaacatgacataataatatc 339972  T

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Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 158601 - 158566
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  158601 atcaacttagaccgactcatgcagcttagttaaata 158566  T

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Target: scaffold0507 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 260
Target Start/End: Complemental strand, 8161 - 7934
Alignment:
Q  39 tagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagcaac--- 133  Q
    ||||||||| ||| ||||||| ||||||| ||   |||| ||||||||||||||||| ||  |||||||||||||||||| |||  || ||| ||||       
T  8161 tagaccgacgcatgcagcttaattaaataacaaatagcagcataggcagtatgcaaatcagctcatgatataataatatcaaatgaaattcaacaacatc 8062  T
Q  134 -tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagca 232  Q
     | ||   ||| |  ||| ||| |||||||||||| |||||||| |||||||||  ||||| || |||||  ||||||||| |||||||||  | |||||    
T  8061 ttaaacattcatatataattcaagtaatgtatataaaattatatcacattataaacaacatcaaatcatatacatcagtctcactggaacaacatcagca 7962  T
Q  233 agttaaacatcttagtttctaacctcta 260  Q
    || |||||| |||||||||  |||||||    
T  7961 agataaacaacttagtttcatacctcta 7934  T

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Target: scaffold0247 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 18130 - 18047
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatcgaa 119  Q
    |||||||| ||||||| |||||||||||| || ||  |||||||||| ||| |||||| | |||||||||||||||||||||||    
T  18130 acttagactgactcatgcagcttagttaattaacaatcagcaacatatgcattatgcacaacatcatgatataataatatcgaa 18047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 26173 - 26071
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatcgaatataaatcag 129  Q
    ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| ||||||||||| ||| ||| |||     
T  26173 catcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaa 26075  T
Q  130 caac 133  Q
    ||||    
T  26074 caac 26071  T

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Target: scaffold0122; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 44814 - 44730
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||| ||||||| ||||||||||||||| ||  |||||||| ||||||||| | ||| || ||||| |||||||||||    
T  44814 atcaacttagactgactcatgcagcttagttaaataaca-acagcaacacaggcagtatacaaaaacagcatgacataataatatc 44730  T

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Target: scaffold1257 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 260
Target Start/End: Complemental strand, 2281 - 2094
Alignment:
Q  76 caacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa---ctcaattatcaaacttaagtcatgtaatgtatatacaatt 172  Q
    |||||||||||||||||||| ||||||||||||| |||||| |||  |||||| |||   ||||| |||| | | ||| |||| ||||||||||||||||    
T  2281 caacataggcagtatgcaaatcatcatgatataacaatatcaaatgcaaatcaacaacatctcaaatatc-agcataattcatataatgtatatacaatt 2183  T
Q  173 atataacattataagaaacattaattcata-agcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    ||||| |||||  |  ||||||   |||||    ||||| ||||||| ||||  ||||||||| |||||| |||| |||||||||||||    
T  2182 atataccattaacaacaacattggatcatattaaatcaggcttactgaaacaacaacagcaagataaacaacttattttctaacctcta 2094  T

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Target: scaffold0427 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 13513 - 13594
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| |||| || ||||| || ||||||||    
T  13513 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaacaacatgacatgataatatc 13594  T

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Target: scaffold0120 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 33073 - 32980
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| |||||||||||| || ||  |||||||| ||||||||| |||| || ||||| |||||||||||    
T  33073 catcatcttcatcaacttagaccgactcatgcagcttagttaattaaca-acagcaacacaggcagtatacaaaacagcatgacataataatatc 32980  T

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Target: scaffold0120; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 45932 - 46025
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| |||||||||||| || ||  |||||||| ||||||||| |||| || ||||| |||||||||||    
T  45932 catcatcttcatcaacttagaccgactcatgcagcttagttaattaaca-acagcaacacaggcagtatacaaaacagcatgacataataatatc 46025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 16117 - 16189
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| ||||    
T  16117 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaa 16189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 17446 - 17401
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||  |||||||||||||||||||||  ||||||||||||||    
T  17446 catcatcttcatcaacttagaccgactcatgtagcttagttaaata 17401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 8646 - 8556
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||     ||||||||||||||||||  ||| || ||||| |||||||||||    
T  8646 catcatcttcatcaacttagaccgactcatgcagcttagttaaata----acagcaacataggcagtatcaaaaacagcatgacataataatatc 8556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 17334 - 17262
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  17334 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa 17262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 25909 - 25993
Alignment:
Q  31 catcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||||  |||||||||||||| ||   ||||||||||||||||| ||||  ||||||| |||||||||||    
T  25909 catcaacttagaccgactcatgaagcttagttaaataaca-atagcaacataggcagtatacaaaatatcatgacataataatatc 25993  T

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Target: scaffold0026; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 39862 - 39955
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  |||||||||||||| ||||||  |||||||||||||| ||   ||||||||||||||||| ||||  ||||||| |||||||||||    
T  39862 catcatcttcatcaacttagaccaactcatgaagcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatc 39955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 13215 - 13309
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||| ||||||| ||||||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  13215 catcatcttcatcaacttagactgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaaaacagcatgacataataatatc 13309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 1855 - 1949
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  ||||||||||| |||||| | ||| || ||||| |||||||||||    
T  1855 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacatagacagtatacaaaaacaacatgacataataatatc 1949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 207522 - 207470
Alignment:
Q  134 tcaattatcaaacttaagtcatgtaatgtatatacaattatataacattataa 186  Q
    ||||| ||||||| ||| ||||| ||| |||||| ||||||||||||||||||    
T  207522 tcaatcatcaaacataattcatgcaatatatatataattatataacattataa 207470  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 51917 - 52011
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||| ||| | ||| || ||||| |||||||||||    
T  51917 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcaatatacaaaaacagcatgacataataatatc 52011  T

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Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 168083 - 168023
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| ||||    
T  168083 caacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaa 168023  T

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Target: scaffold0145 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 32946 - 33039
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  |||||| |||||||||||||| ||||||| ||||||| ||   ||||||||||||||||| |||| || ||||| |||||||||||    
T  32946 catcatcttcatcaagttagaccgactcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatc 33039  T

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Target: scaffold0145; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 38765 - 38858
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  |||||||||||||||| |||| ||||||| ||||||| ||   ||||||||||||||||| |||| || ||||| |||||||||||    
T  38765 catcatcttcatcaacttagaccgagtcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatc 38858  T

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Target: scaffold0145; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 9760 - 9795
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  9760 atcaacttagaccgactcatgcagcttagttaaata 9795  T

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Target: scaffold0114 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 15568 - 15487
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||| ||||||| ||||||||||||||| ||   ||||||||||||||||| |||| || ||||| |||||||||||    
T  15568 caacttagactgactcatgcagcttagttaaataacaag-agcaacataggcagtatacaaaacaacatgacataataatatc 15487  T

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Target: scaffold0113 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 32083 - 32163
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||  |||| || ||||| |||||||||||    
T  32083 caacttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtaaacaaa-caacatgacataataatatc 32163  T

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Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 39917 - 40010
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||  |||||||||||||| |||||| ||||||| ||||||| ||   ||||||||||||||||| |||| || ||||| |||||||||||    
T  39917 catcatcttcatcaacttagaccaactcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacaacatgacataataatatc 40010  T

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Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 51601 - 51672
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataat 110  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| |||  |||||||| |||||    
T  51601 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--catcatgacataat 51672  T

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Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 174785 - 174838
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||    
T  174785 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtat 174838  T

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Target: scaffold0021; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 121770 - 121835
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagt 88  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||| ||  || |||||||||||||    
T  121770 catcatcttcatcaacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagt 121835  T

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Target: scaffold1137 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 260
Target Start/End: Complemental strand, 2267 - 2179
Alignment:
Q  172 tatataacattataagaaacattaattcataagcatcagtcttactggaacattaacagcaagttaaacatcttagtttctaacctcta 260  Q
    |||| ||||||||||  ||||| |||||||| |||||||||||||||| | |  | ||| ||| |||||| ||||||||||||||||||    
T  2267 tatacaacattataaacaacatcaattcatatgcatcagtcttactgggataagatcagtaagataaacaacttagtttctaacctcta 2179  T

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Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 1308 - 1385
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||||||||| | |||  |||||||| ||||| |||||    
T  1308 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtgtacaa--catcatgacataattatatc 1385  T

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Target: scaffold0106; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 7285 - 7338
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||||||||||| ||||||||||||||| ||  || |||||||||||||||    
T  7285 cttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtat 7338  T

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Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 9133 - 9180
Alignment:
Q  73 cagcaacataggcagtatgcaaaccatcatgatataataatatcgaat 120  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  9133 cagcaacataggcagtatgcaactcatcatgatataacaatatcgaat 9180  T

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Target: scaffold0456 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 10528 - 10448
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| |||| ||||||| || ||  |||||||||||||||||| |||  || ||||| |||||||||||    
T  10528 caacttagaccgactcatgcagcatagttaattaacaaacagcaacataggcagtatacaa--cagcatgacataataatatc 10448  T

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Target: scaffold0403 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 4865 - 4947
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||| ||| ||||||||||| ||  |||||||||||||||||| | ||| || ||||| |||||||||||    
T  4865 caacttagaccgactcatgcagattagttaaataaca-acagcaacataggcagtatacaaaatcagcatgacataataatatc 4947  T

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Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 184
Target Start/End: Original strand, 25121 - 25276
Alignment:
Q  33 tcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagc 130  Q
    ||||||||||||||||||| ||||||||||||  | ||  ||||||||||||||||||  ||| ||  |||||||||||  ||||| |||  |||||| |    
T  25121 tcaacttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatataaaacagctcatgatataacgatatc-aatgcaaatcaac 25219  T
Q  131 aa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattat 184  Q
    ||   |||||  |||| |  ||| ||||||||||||||||||| ||||| |||||||    
T  25220 aacatctcaaacatcatatataattcatgtaatgtatatacaaatatatcacattat 25276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 24406 - 24348
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||||||||||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  24406 acttagaccgactcatgcagcttagttaaataaca-acagcaacataggcagtatacaaa 24348  T

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Target: scaffold1842 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 1153 - 1093
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| ||||    
T  1153 caacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaa 1093  T

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Target: scaffold0647 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 6241 - 6196
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||    
T  6241 catcatcttcatcaacttagaccgactcatgcagcttagttaaata 6196  T

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Target: scaffold0454 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 10784 - 10867
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||||||||||||||| ||||||||||||||| ||  |||||||| | ||||||| | ||| |||||||| |||||||||||    
T  10784 atcaacttagaccgactcatgcagcttagttaaataaca-acagcaacaca-gcagtatacaaaaacatcatgacataataatatc 10867  T

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Target: scaffold0358 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 4728 - 4788
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaa 95  Q
    |||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||| ||||    
T  4728 caacttagaccgactcatgcagcttagttaaataaca-acaacaacataggcagtatacaaa 4788  T

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Target: scaffold0351 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 16301 - 16354
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtat 90  Q
    ||||||||||||||| |||||||||||||||  |  ||||||||||||||||||    
T  16301 cttagaccgactcatgcagcttagttaaataagaaacagcaacataggcagtat 16354  T

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Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 20928 - 21009
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    ||||||||||||||||  ||||||||||| || ||  |||||||||||||| ||||| ||| || ||||| |||||||||||    
T  20928 acttagaccgactcataaagcttagttaattaacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatc 21009  T

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Target: scaffold0761 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 4308 - 4343
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  4308 atcaacttagaccgactcatgcagcttagttaaata 4343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 4705 - 4740
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  4705 atcaacttagaccgactcatgcagcttagttaaata 4740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 13403 - 13438
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  13403 atcaacttagaccgactcatgcagcttagttaaata 13438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 9253 - 9288
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  9253 atcaacttagaccgactcatgcagcttagttaaata 9288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 3474 - 3568
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |    ||||||||||||||||| | ||| || ||||| |||||||||||    
T  3474 catcatcttcatcaacttagaccgactcatgtagcttagttaaataac-taaagcaacataggcagtatacaaaaacagcatgacataataatatc 3568  T

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Target: scaffold0292; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 361 - 440
Alignment:
Q  36 acttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    |||||||||||||||| ||||||||||||||| ||  ||  |||||||||||||| ||||  | |||||  ||||||||||    
T  361 acttagaccgactcatgcagcttagttaaataaca-acaataacataggcagtatacaaaatagcatgacgtaataatatc 440  T

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Target: scaffold0254 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 20758 - 20793
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  20758 atcaacttagaccgactcatgcagcttagttaaata 20793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 22897 - 22932
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  22897 atcaacttagaccgactcatgcagcttagttaaata 22932  T

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Target: scaffold0217 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 16717 - 16623
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgc-aaaccatcatgatataataatatc 116  Q
    |||||||  |||||| |||||||||||||| ||||||||||||||| ||  |||||||| | ||||||| | ||| || ||||| |||||||||||    
T  16717 catcatcttcatcaatttagaccgactcatgcagcttagttaaataaca-acagcaacacaagcagtatacgaaaacagcatgacataataatatc 16623  T

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Target: scaffold0142 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 16795 - 16830
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  16795 atcaacttagaccgactcatgcagcttagttaaata 16830  T

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Target: scaffold0134 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 37832 - 37867
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  37832 atcaacttagaccgactcatgcagcttagttaaata 37867  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 116441 - 116476
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  116441 atcaacttagaccgactcatgcagcttagttaaata 116476  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 129072 - 128921
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaacca--tcatgatataataatatcgaatataaatcagcaa-- 132  Q
    ||||||||||||||| |||||||||| |||| ||  |||||||||||||||||   ||| ||  ||||||||||| |||||| |||  |||||| |||      
T  129072 cttagaccgactcatgcagcttagtt-aataacaaacagcaacataggcagtacataaaacaattcatgatataacaatatcaaatgcaaatcaacaaca 128974  T
Q  133 -ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacattat 184  Q
     |||||  |||| |  ||| |||||||||| |||||||| ||||| |||||||    
T  128973 tctcaaacatcatatataattcatgtaatggatatacaaatatatcacattat 128921  T

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Target: scaffold0639 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 8483 - 8528
Alignment:
Q  22 catcatcaacatcaacttagaccgactcattcagcttagttaaata 67  Q
    |||||||  ||||||||||||||||||||| |||||| ||||||||    
T  8483 catcatcttcatcaacttagaccgactcatgcagcttggttaaata 8528  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 12075 - 12108
Alignment:
Q  32 atcaacttagaccgactcattcagcttagttaaa 65  Q
    |||||||||||||||||||| |||||||||||||    
T  12075 atcaacttagaccgactcatgcagcttagttaaa 12108  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 161239 - 161206
Alignment:
Q  34 caacttagaccgactcattcagcttagttaaata 67  Q
    |||||||||||||||||| |||||||||||||||    
T  161239 caacttagaccgactcatgcagcttagttaaata 161206  T

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Target: scaffold0718 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 5230 - 5153
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||| ||||||||||||||| ||  || ||||||||| | ||| |||  |||||||| ||||| |||||    
T  5230 cttagaccgactcatgcagcttagttaaataacaaacatcaacataggtattatacaa--catcatgacataattatatc 5153  T

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Target: scaffold0598 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 1151 - 1074
Alignment:
Q  37 cttagaccgactcattcagcttagttaaataccacccagcaacataggcagtatgcaaaccatcatgatataataatatc 116  Q
    ||||||||||||||| |||||||||||| ||  |  || ||||||||||||||| |||  |||||||| ||||| |||||    
T  1151 cttagaccgactcatgcagcttagttaattaataaacatcaacataggcagtatacaa--catcatgacataattatatc 1074  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 29946 - 29978
Alignment:
Q  35 aacttagaccgactcattcagcttagttaaata 67  Q
    ||||||||||||||||| |||||||||||||||    
T  29946 aacttagaccgactcatgcagcttagttaaata 29978  T

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