View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19868_high_17 (Length: 258)
Name: NF19868_high_17
Description: NF19868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19868_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 44548406 - 44548227
Alignment:
| Q |
64 |
ataagaaagtaaggagaaaagcaagccgagattccaaaagagaggattgatatgttgtcattgaatgcctcatcctactatgtgccaagcttccttaaac |
163 |
Q |
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| T |
44548406 |
ataagaaagtaatgagaaaagcaagccgagattccaaaagagaggattgatatgttgtcattgaatgcctcatcctactatgtgccaaccttccttaaac |
44548307 |
T |
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| Q |
164 |
accctcattgagtatatcttgtgttagccttcttatacctctttccccttccaagctcttgaggctgagtttgtggagca |
243 |
Q |
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| T |
44548306 |
accctcattgagtatatcttgtgttagccttcttatacctctttccccttccaagctcttgaggctgagtttgtggagca |
44548227 |
T |
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