View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19868_low_12 (Length: 323)
Name: NF19868_low_12
Description: NF19868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19868_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 42393437 - 42393137
Alignment:
| Q |
1 |
ggacgcatgtaggaatatgcagtttccaaattacactccaattgcgttgaatgaattcatgagcaggttcaacaattagcaattagcttcatacgtaagc |
100 |
Q |
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| T |
42393437 |
ggacgcatgtaggaatatgcagtttccaaattacactccaattgcgttgaatgaattcacgagcaggttcaacaattagcaattagcctcatacgtaagc |
42393338 |
T |
|
| Q |
101 |
tgtatgaagacttgacagaaaattttccatcacttgacacattccagatacgacagtccatgatatctctgctaaaaagcggcatttgaaaaattgcatc |
200 |
Q |
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| T |
42393337 |
tgtatgaagacttgacagaatattttccatcacttgacacattccagatacgacagtccatgatatctctgctaaaaagaggcatttgaaaaattgcatc |
42393238 |
T |
|
| Q |
201 |
agcatcaaaagtattaaaactagcactcctcgtgtcattgttccaagagagaagatcagaagacatcagactgtgtactgtcaacccgagaaggtgaggg |
300 |
Q |
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| T |
42393237 |
agcatcaaaagtattaaaactagcactcctcgtgtcattgttccaagagagaagatcagaagacatcagactgtgtactgtcaacccgagaaggtgaggg |
42393138 |
T |
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| Q |
301 |
t |
301 |
Q |
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| T |
42393137 |
t |
42393137 |
T |
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