View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19868_low_20 (Length: 202)
Name: NF19868_low_20
Description: NF19868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19868_low_20 |
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Alignment Details
Target: chr4 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 34795157 - 34795345
Alignment:
| Q |
1 |
tgtttttcttttctctctcttcttgtctgccacacatcacacccaaacagtcttcagcattgcagtctctgcaacactgctactccttcagcatatagac |
100 |
Q |
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| T |
34795157 |
tgtttttcttttctctctcttcttgtctgccacacatcacacccaaacagtcttcagcattgcagtctctgcaacactgctactccttcagcatatagac |
34795256 |
T |
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| Q |
101 |
gaacgagtaaaagggtatactatacacaaataataataccaacaataattaccattaataactccatcaaaaagattaacttttttagtattta |
194 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |
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| T |
34795257 |
gaacgagtaaaaggg-----tatacacaaataataataccaacaataattatcattaataactccatcaaaaaggttaacttttttagtattta |
34795345 |
T |
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