View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1986_low_12 (Length: 237)

Name: NF1986_low_12
Description: NF1986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1986_low_12
NF1986_low_12
[»] chr1 (43 HSPs)
chr1 (5-222)||(10889232-10889447)
chr1 (50-100)||(42888576-42888626)
chr1 (47-100)||(28016200-28016253)
chr1 (50-117)||(7158774-7158842)
chr1 (50-97)||(16826355-16826402)
chr1 (50-96)||(17651394-17651440)
chr1 (50-100)||(19620577-19620627)
chr1 (50-96)||(25086484-25086530)
chr1 (50-100)||(26755617-26755667)
chr1 (50-99)||(563202-563251)
chr1 (46-95)||(17188683-17188732)
chr1 (50-95)||(48100723-48100768)
chr1 (52-100)||(29739340-29739388)
chr1 (47-95)||(34142379-34142427)
chr1 (51-95)||(44718073-44718117)
chr1 (50-100)||(925436-925487)
chr1 (49-100)||(22346676-22346727)
chr1 (50-97)||(39252270-39252317)
chr1 (49-96)||(40227829-40227876)
chr1 (50-97)||(45140019-45140066)
chr1 (50-100)||(1605397-1605447)
chr1 (50-100)||(2613723-2613773)
chr1 (54-100)||(3509951-3509997)
chr1 (50-100)||(7550897-7550947)
chr1 (54-100)||(8269378-8269424)
chr1 (50-96)||(12213994-12214040)
chr1 (50-92)||(14520945-14520987)
chr1 (50-100)||(17917148-17917198)
chr1 (50-100)||(25532974-25533024)
chr1 (50-100)||(34521200-34521250)
chr1 (50-100)||(38448876-38448926)
chr1 (50-96)||(39302946-39302992)
chr1 (50-100)||(41763165-41763215)
chr1 (50-96)||(42045386-42045432)
chr1 (50-100)||(44641528-44641578)
chr1 (50-95)||(8253740-8253785)
chr1 (50-95)||(16967209-16967254)
chr1 (43-100)||(23203316-23203373)
chr1 (50-95)||(43426181-43426226)
chr1 (50-99)||(52441522-52441571)
chr1 (50-102)||(26498062-26498114)
chr1 (55-95)||(36228573-36228613)
chr1 (50-102)||(41926823-41926875)
[»] chr4 (53 HSPs)
chr4 (50-102)||(51458679-51458731)
chr4 (50-100)||(35021477-35021527)
chr4 (50-100)||(9946428-9946478)
chr4 (47-100)||(11949773-11949826)
chr4 (50-103)||(24885807-24885860)
chr4 (50-95)||(39171385-39171430)
chr4 (50-95)||(43374287-43374332)
chr4 (50-100)||(32139340-32139391)
chr4 (42-100)||(675911-675969)
chr4 (50-100)||(5924650-5924700)
chr4 (50-100)||(7371558-7371608)
chr4 (50-100)||(20383489-20383539)
chr4 (50-100)||(35287517-35287567)
chr4 (50-96)||(56564997-56565043)
chr4 (50-98)||(36203237-36203285)
chr4 (48-100)||(46676508-46676560)
chr4 (52-100)||(47814261-47814309)
chr4 (46-105)||(12439661-12439720)
chr4 (55-94)||(19347335-19347374)
chr4 (50-97)||(19588155-19588202)
chr4 (50-97)||(31780746-31780793)
chr4 (50-97)||(38453266-38453313)
chr4 (50-96)||(2186347-2186393)
chr4 (50-100)||(3936628-3936678)
chr4 (50-100)||(7230281-7230331)
chr4 (50-100)||(10303521-10303571)
chr4 (50-100)||(10497260-10497310)
chr4 (50-96)||(12698598-12698644)
chr4 (54-96)||(16431621-16431663)
chr4 (50-100)||(19479487-19479537)
chr4 (50-100)||(19854566-19854616)
chr4 (50-100)||(20799404-20799454)
chr4 (50-100)||(24665001-24665051)
chr4 (50-100)||(42845026-42845076)
chr4 (50-96)||(43702343-43702389)
chr4 (50-96)||(49021767-49021813)
chr4 (50-96)||(52270044-52270090)
chr4 (50-95)||(2430998-2431043)
chr4 (50-99)||(7030904-7030953)
chr4 (46-110)||(9196210-9196275)
chr4 (55-100)||(16304108-16304153)
chr4 (54-95)||(16584964-16585005)
chr4 (50-99)||(21991258-21991307)
chr4 (55-100)||(22040656-22040701)
chr4 (50-95)||(38340335-38340380)
chr4 (50-95)||(42773053-42773098)
chr4 (52-100)||(241394-241442)
chr4 (50-102)||(4963360-4963412)
chr4 (50-90)||(9539213-9539253)
chr4 (48-100)||(11198327-11198379)
chr4 (50-98)||(25978319-25978366)
chr4 (50-98)||(30847994-30848042)
chr4 (52-96)||(49308823-49308867)
[»] chr8 (34 HSPs)
chr8 (50-96)||(2554226-2554272)
chr8 (50-96)||(39433411-39433457)
chr8 (50-99)||(27718905-27718954)
chr8 (50-98)||(6314335-6314383)
chr8 (47-98)||(9656009-9656060)
chr8 (54-100)||(24195254-24195300)
chr8 (52-117)||(11771710-11771775)
chr8 (50-102)||(30427732-30427784)
chr8 (50-97)||(29499772-29499819)
chr8 (45-99)||(8461847-8461901)
chr8 (42-100)||(10982719-10982777)
chr8 (50-100)||(17898080-17898130)
chr8 (50-100)||(19163546-19163596)
chr8 (50-100)||(19778066-19778116)
chr8 (50-100)||(32051542-32051592)
chr8 (50-100)||(32421570-32421620)
chr8 (54-100)||(40679739-40679785)
chr8 (50-100)||(40795378-40795428)
chr8 (50-99)||(574385-574434)
chr8 (49-102)||(7987737-7987790)
chr8 (43-92)||(13004159-13004208)
chr8 (50-95)||(17062354-17062399)
chr8 (50-95)||(17585959-17586004)
chr8 (50-95)||(37872185-37872230)
chr8 (50-95)||(37872978-37873023)
chr8 (53-98)||(43962036-43962081)
chr8 (59-95)||(5907000-5907036)
chr8 (52-92)||(8137938-8137978)
chr8 (50-98)||(11708987-11709035)
chr8 (60-100)||(12800910-12800950)
chr8 (50-102)||(13286132-13286184)
chr8 (50-98)||(23852912-23852960)
chr8 (50-98)||(25136856-25136904)
chr8 (47-95)||(26991772-26991820)
[»] chr6 (27 HSPs)
chr6 (50-102)||(26320571-26320623)
chr6 (50-102)||(18256884-18256936)
chr6 (50-100)||(14296967-14297017)
chr6 (42-100)||(20720791-20720849)
chr6 (50-100)||(26400865-26400915)
chr6 (50-103)||(16130766-16130819)
chr6 (50-102)||(20847519-20847571)
chr6 (50-97)||(12333581-12333628)
chr6 (50-100)||(655759-655809)
chr6 (50-100)||(4450263-4450313)
chr6 (50-96)||(4494885-4494931)
chr6 (48-98)||(6864145-6864195)
chr6 (50-96)||(7081668-7081714)
chr6 (50-96)||(20744139-20744185)
chr6 (50-100)||(21847195-21847245)
chr6 (50-100)||(24269884-24269934)
chr6 (50-100)||(28231435-28231485)
chr6 (54-100)||(33824886-33824932)
chr6 (50-95)||(2931366-2931411)
chr6 (50-99)||(11982552-11982601)
chr6 (50-95)||(12329277-12329322)
chr6 (50-99)||(13496117-13496166)
chr6 (50-95)||(32053789-32053834)
chr6 (50-103)||(33938686-33938739)
chr6 (50-102)||(21373414-21373466)
chr6 (52-88)||(24827055-24827091)
chr6 (52-96)||(27907965-27908009)
[»] scaffold0735 (1 HSPs)
scaffold0735 (50-100)||(1529-1579)
[»] scaffold0031 (1 HSPs)
scaffold0031 (42-96)||(47255-47309)
[»] chr7 (43 HSPs)
chr7 (50-100)||(19416515-19416565)
chr7 (50-100)||(10244728-10244778)
chr7 (50-100)||(45046225-45046275)
chr7 (50-95)||(9893095-9893140)
chr7 (46-99)||(33610936-33610989)
chr7 (50-102)||(18505665-18505717)
chr7 (44-100)||(39043750-39043806)
chr7 (50-102)||(46207761-46207813)
chr7 (50-93)||(3672569-3672612)
chr7 (50-100)||(20243256-20243307)
chr7 (56-99)||(25288671-25288714)
chr7 (51-93)||(15492305-15492347)
chr7 (50-100)||(27462446-27462496)
chr7 (50-92)||(35142167-35142209)
chr7 (50-100)||(39801707-39801757)
chr7 (50-100)||(40752849-40752899)
chr7 (50-100)||(46987087-46987137)
chr7 (50-95)||(429193-429238)
chr7 (50-99)||(580937-580986)
chr7 (58-95)||(1311817-1311854)
chr7 (50-95)||(13044157-13044202)
chr7 (50-95)||(13955481-13955526)
chr7 (51-96)||(15433473-15433518)
chr7 (50-103)||(21050229-21050282)
chr7 (51-96)||(21286352-21286397)
chr7 (50-103)||(21993183-21993235)
chr7 (52-89)||(26471219-26471256)
chr7 (52-89)||(26547659-26547696)
chr7 (50-95)||(41132445-41132490)
chr7 (47-100)||(42095953-42096006)
chr7 (54-95)||(47342682-47342723)
chr7 (50-99)||(48527191-48527240)
chr7 (50-102)||(3953442-3953494)
chr7 (50-98)||(5352330-5352378)
chr7 (50-98)||(8615024-8615072)
chr7 (52-100)||(18714451-18714499)
chr7 (60-100)||(18773766-18773806)
chr7 (49-97)||(24656970-24657018)
chr7 (71-103)||(35224140-35224172)
chr7 (50-102)||(36428149-36428201)
chr7 (50-98)||(41527561-41527609)
chr7 (50-98)||(44406868-44406916)
chr7 (47-99)||(47342445-47342497)
[»] chr5 (37 HSPs)
chr5 (50-100)||(10704341-10704391)
chr5 (50-98)||(28207133-28207181)
chr5 (50-100)||(6624777-6624827)
chr5 (51-97)||(16036829-16036875)
chr5 (50-100)||(18331708-18331758)
chr5 (42-100)||(26655457-26655515)
chr5 (42-100)||(26927042-26927100)
chr5 (50-100)||(32200457-32200507)
chr5 (50-100)||(37932331-37932381)
chr5 (50-100)||(40715959-40716009)
chr5 (50-99)||(39980509-39980558)
chr5 (50-98)||(18391601-18391649)
chr5 (52-100)||(20721053-20721101)
chr5 (50-98)||(20927640-20927688)
chr5 (50-105)||(31561348-31561404)
chr5 (50-102)||(32858671-32858723)
chr5 (62-101)||(2089309-2089348)
chr5 (51-105)||(8024403-8024458)
chr5 (50-89)||(13880197-13880236)
chr5 (50-92)||(6375524-6375566)
chr5 (50-100)||(11637582-11637632)
chr5 (50-100)||(13864345-13864395)
chr5 (50-100)||(22522811-22522861)
chr5 (50-100)||(22555232-22555282)
chr5 (50-100)||(25604010-25604060)
chr5 (50-100)||(26409254-26409304)
chr5 (50-100)||(34191434-34191484)
chr5 (50-92)||(39610359-39610401)
chr5 (54-100)||(40837913-40837959)
chr5 (50-99)||(8545000-8545049)
chr5 (51-96)||(9893685-9893730)
chr5 (50-95)||(17708075-17708120)
chr5 (39-100)||(18147708-18147769)
chr5 (57-102)||(35412965-35413010)
chr5 (50-98)||(22394036-22394084)
chr5 (50-102)||(24485700-24485752)
chr5 (50-98)||(41650951-41650999)
[»] chr3 (43 HSPs)
chr3 (50-100)||(25340934-25340984)
chr3 (50-100)||(32629081-32629131)
chr3 (50-100)||(44579637-44579687)
chr3 (50-95)||(20370296-20370341)
chr3 (50-100)||(14827526-14827576)
chr3 (50-96)||(21506772-21506818)
chr3 (50-96)||(33745100-33745146)
chr3 (49-95)||(51505873-51505919)
chr3 (47-100)||(29631184-29631237)
chr3 (50-95)||(53162199-53162244)
chr3 (47-95)||(7757081-7757129)
chr3 (60-99)||(665976-666015)
chr3 (52-99)||(977952-977999)
chr3 (50-89)||(33404229-33404268)
chr3 (53-100)||(38034819-38034866)
chr3 (49-100)||(38894037-38894088)
chr3 (50-100)||(7738670-7738720)
chr3 (50-96)||(10498709-10498755)
chr3 (50-100)||(21331427-21331477)
chr3 (50-108)||(21914837-21914895)
chr3 (50-100)||(23147988-23148038)
chr3 (50-96)||(27185478-27185524)
chr3 (50-100)||(28244114-28244164)
chr3 (50-100)||(30229536-30229586)
chr3 (50-96)||(32843276-32843322)
chr3 (50-100)||(38130969-38131019)
chr3 (44-98)||(42784952-42785006)
chr3 (41-99)||(49710712-49710770)
chr3 (50-96)||(53996300-53996346)
chr3 (50-95)||(5117209-5117254)
chr3 (47-96)||(20400075-20400124)
chr3 (50-95)||(20413767-20413812)
chr3 (50-95)||(29687083-29687128)
chr3 (50-91)||(32836174-32836215)
chr3 (50-95)||(55126007-55126052)
chr3 (54-102)||(4216407-4216455)
chr3 (50-98)||(19468452-19468500)
chr3 (50-98)||(22722403-22722451)
chr3 (52-96)||(35863827-35863871)
chr3 (48-96)||(45096025-45096073)
chr3 (52-100)||(45431951-45431999)
chr3 (50-102)||(48531279-48531331)
chr3 (52-96)||(52575950-52575994)
[»] chr2 (46 HSPs)
chr2 (47-96)||(15427690-15427739)
chr2 (50-99)||(33063987-33064036)
chr2 (51-100)||(36474764-36474813)
chr2 (52-95)||(23756715-23756758)
chr2 (50-100)||(24305315-24305365)
chr2 (50-100)||(25186252-25186302)
chr2 (50-100)||(32513675-32513725)
chr2 (47-100)||(3113737-3113790)
chr2 (50-95)||(22523027-22523072)
chr2 (49-102)||(32901381-32901434)
chr2 (52-100)||(6765613-6765661)
chr2 (54-102)||(7302149-7302197)
chr2 (50-98)||(29734692-29734740)
chr2 (50-97)||(1861822-1861869)
chr2 (50-100)||(9799419-9799470)
chr2 (50-105)||(39761439-39761494)
chr2 (48-102)||(10991541-10991595)
chr2 (50-96)||(11428864-11428910)
chr2 (50-100)||(20455892-20455942)
chr2 (50-100)||(20565085-20565135)
chr2 (50-100)||(24593377-24593427)
chr2 (50-96)||(27244658-27244704)
chr2 (50-100)||(27411093-27411143)
chr2 (42-100)||(36359307-36359365)
chr2 (50-100)||(39068718-39068768)
chr2 (50-100)||(41187467-41187517)
chr2 (50-96)||(41526790-41526836)
chr2 (50-100)||(42066713-42066763)
chr2 (50-100)||(42791296-42791346)
chr2 (50-100)||(44526129-44526179)
chr2 (50-95)||(9383224-9383269)
chr2 (50-95)||(9519729-9519774)
chr2 (50-95)||(9842217-9842262)
chr2 (50-95)||(10156018-10156063)
chr2 (50-95)||(15251854-15251899)
chr2 (47-100)||(16221356-16221409)
chr2 (50-99)||(34977205-34977254)
chr2 (52-85)||(45249152-45249185)
chr2 (47-95)||(9547424-9547472)
chr2 (47-95)||(19212956-19213004)
chr2 (54-98)||(22061292-22061336)
chr2 (50-98)||(28202298-28202346)
chr2 (39-95)||(30956419-30956475)
chr2 (50-102)||(34464417-34464469)
chr2 (48-96)||(40099397-40099445)
chr2 (50-98)||(41778956-41779004)
[»] scaffold0011 (2 HSPs)
scaffold0011 (50-93)||(223159-223202)
scaffold0011 (50-100)||(185264-185314)
[»] scaffold0154 (1 HSPs)
scaffold0154 (50-100)||(37536-37586)
[»] scaffold0118 (2 HSPs)
scaffold0118 (50-100)||(45413-45463)
scaffold0118 (50-95)||(39999-40044)
[»] scaffold0050 (1 HSPs)
scaffold0050 (50-96)||(53394-53440)
[»] scaffold0038 (1 HSPs)
scaffold0038 (50-100)||(31932-31982)
[»] scaffold0021 (1 HSPs)
scaffold0021 (50-100)||(161142-161192)
[»] scaffold0180 (1 HSPs)
scaffold0180 (50-102)||(17733-17785)
[»] scaffold0160 (1 HSPs)
scaffold0160 (50-98)||(22912-22960)


Alignment Details
Target: chr1 (Bit Score: 136; Significance: 4e-71; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 5 - 222
Target Start/End: Complemental strand, 10889447 - 10889232
Alignment:
Q  5 tggaagctagtctacatattatagatagtaaatcttgtgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtttg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||| | ||| |||||||||||||||||| | ||| |    
T  10889447 tggaagctagtctacatattatagatagtaaatcttgtgtcttcatgagcttagctcggttggaatgaagaatgcataaaatatgcaaggtctgagttcg 10889348  T
Q  105 agcctccaccaccnnnnnnnnntagtaaattttgtcttgaaaagatatactagtaaatagtaacaatactagtagcaataatttgaatataaaacagata 204  Q
    | |||||||||           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10889347 aacctccacca--aaaaaaaaatagtaaatcttgtcttgaaaagatatactagtaaatagtaacaatactagtagcaataatttgaatataaaacagata 10889250  T
Q  205 tatctcaaacagaaaatt 222  Q
    ||||||||||||||||||    
T  10889249 tatctcaaacagaaaatt 10889232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 42888576 - 42888626
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  42888576 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggg 42888626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 28016253 - 28016200
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||| ||||||    
T  28016253 tcatgagtttagctcagttgggatggacaatacataaaatatgcaagatccggg 28016200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 7158774 - 7158842
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg-gtttgagcctccaccacc 117  Q
    |||| ||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||| | ||||||    
T  7158774 tgagtttagcccagttgatatggacaatgcataaaatatgcaaggtccggagtttgagccccgaccacc 7158842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 16826355 - 16826402
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||    
T  16826355 tgagcttagctcagttgctatggacaatgcataaaatatgcaaggtcc 16826402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 17651440 - 17651394
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||| || |||||| ||||||||||||||||||||||||||||    
T  17651440 tgagcttaactaagttgatatggacaatacataaaatatgcaaggtc 17651394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 19620577 - 19620627
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||||||||| ||||||||||||||||    
T  19620577 tgagcttagctcagttggtaaggacaatacataatatatgcaaggtccggg 19620627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 25086484 - 25086530
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  25086484 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 25086530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 26755617 - 26755667
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||| ||||||||| ||| | ||||||||||||||||    
T  26755617 tgagcttagctcagttgatatggacaatgcattatatatgcaaggtccggg 26755667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 563202 - 563251
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||||||||| | |||||| |||||| |||||||||||||||    
T  563202 tgagcttagctcagttgataaggacaaaacataatatatgcaaggtccgg 563251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 17188732 - 17188683
Alignment:
Q  46 ttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||||||  ||||||||| ||||||||||| |||||    
T  17188732 ttcatgagcttagctcagttggtatggacaatgcataaaatatgtaaggt 17188683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 48100723 - 48100768
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||    
T  48100723 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggt 48100768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 29739340 - 29739388
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||  | ||||||| ||||||||||||||||||||||    
T  29739340 agcttagctcagttggtaaggacaatgcataaaatatgcaaggtccggg 29739388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 34142427 - 34142379
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||||||||||||||||  ||| ||||||||||| |||||||||||    
T  34142427 tcatgagcttagctcagttggtatgcacaatacataatatatgcaaggt 34142379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 44718117 - 44718073
Alignment:
Q  51 gagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||||||||||||  |||||||||| ||||||||||||||||    
T  44718117 gagcttagctcagttggtatggacaatagataaaatatgcaaggt 44718073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 925487 - 925436
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaa-tatgcaaggtccggg 100  Q
    ||||||||| |||||||| ||||||||| ||||||| |||||||||||||||    
T  925487 tgagcttagttcagttgatatggacaatgcataaaaatatgcaaggtccggg 925436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 22346676 - 22346727
Alignment:
Q  49 atgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||||||||   |||| ||| ||||||||||||||||||||||    
T  22346676 atgagcttagctcagttggtttggataatgcataaaatatgcaaggtccggg 22346727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 39252317 - 39252270
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    |||||||||||||||||| || |||||||||||| ||||| |||||||    
T  39252317 tgagcttagctcagttgatatcgacaatacataatatatgtaaggtcc 39252270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 40227829 - 40227876
Alignment:
Q  49 atgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||    
T  40227829 atgagcttagctcagttggtatggacaatgcataaaatatacaaggtc 40227876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 45140066 - 45140019
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    |||||||||||||||||  ||||||||| ||||| |||||||||||||    
T  45140066 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtcc 45140019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 1605397 - 1605447
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||| ||||   ||||||||| ||||||||||||||||||||||    
T  1605397 tgagcttagcttagttagtatggacaatgcataaaatatgcaaggtccggg 1605447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 2613723 - 2613773
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||| ||||| ||||    
T  2613723 tgagcttagctcagttggtatggacaatgcataaaatatgtaaggttcggg 2613773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 3509997 - 3509951
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  3509997 cttagctcagttggtatggacaatgcataatatatgcaaggtccggg 3509951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 7550897 - 7550947
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||| ||| ||||| |||||||||| |||||||||||    
T  7550897 tgagcttaactcagttgatatgaacaatgcataaaatatacaaggtccggg 7550947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 8269424 - 8269378
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||  | ||||||||||||| ||||||||||||||||    
T  8269424 cttagctcagttggtaaggacaatacataatatatgcaaggtccggg 8269378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 12213994 - 12214040
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||| | | ||||||||||| ||||||||||||    
T  12213994 tgagcttagctcagttgataggaacaatacataatatatgcaaggtc 12214040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 14520945 - 14520987
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaa 92  Q
    |||||||||||||||||  ||||||||| ||||||||||||||    
T  14520945 tgagcttagctcagttggtatggacaatgcataaaatatgcaa 14520987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 17917198 - 17917148
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||| ||||||||||||| ||||||||| ||||||||||| ||||| ||||    
T  17917198 tgagtttagctcagttgatatggacaatgcataaaatatgtaaggttcggg 17917148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 25532974 - 25533024
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||| |||||||  ||||||||| ||||| ||||||||||||||||    
T  25532974 tgagcttagttcagttggtatggacaatgcataatatatgcaaggtccggg 25533024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 34521250 - 34521200
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||| ||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  34521250 tgagtttagctcagttggtatggacaatgcataatatatgcaaggtccggg 34521200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 38448926 - 38448876
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  38448926 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggg 38448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 39302946 - 39302992
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    ||||| |||||||||||  | ||||||||||||||||||||||||||    
T  39302946 tgagcatagctcagttggtaaggacaatacataaaatatgcaaggtc 39302992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 41763215 - 41763165
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||| ||| ||||||||||||||||||||||    
T  41763215 tgagcttagctcagttggtagggataatgcataaaatatgcaaggtccggg 41763165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 42045432 - 42045386
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||    
T  42045432 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 42045386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 44641528 - 44641578
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||| ||||||||||||| ||||||||| ||||| |||||||||| |||||    
T  44641528 tgagtttagctcagttgatatggacaatgcataatatatgcaaggcccggg 44641578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 8253740 - 8253785
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  ||||||||| ||||| |||||||||||    
T  8253740 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 8253785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 16967254 - 16967209
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||||||| |||||| ||||||||| ||||| |||||||||||    
T  16967254 tgagcttagcttagttgatatggacaatgcataatatatgcaaggt 16967209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 23203316 - 23203373
Alignment:
Q  43 gttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||||||||||||||    | ||||| ||||||||||||||||| ||||    
T  23203316 gttttcatgagcttagctcagttggttggaacaatgcataaaatatgcaaggttcggg 23203373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 43426181 - 43426226
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  | ||||||||||||||||||| |||||    
T  43426181 tgagcttagctcagttggtagggacaatacataaaatatgtaaggt 43426226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 52441571 - 52441522
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||||||||  || |||||| ||||| |||||||||||||||    
T  52441571 tgagcttagctcagttggtatagacaatgcataatatatgcaaggtccgg 52441522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 26498062 - 26498114
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||||||  | ||||||| ||||||||||| |||||| |||||    
T  26498062 tgagcttagctcagttggtacggacaatgcataaaatatgtaaggtctgggtt 26498114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 36228573 - 36228613
Alignment:
Q  55 ttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||| |||||| ||||||||| |||||||||||||||||    
T  36228573 ttagcttagttgatatggacaatgcataaaatatgcaaggt 36228613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 41926823 - 41926875
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||||||  | ||||||| ||||| ||||| ||||||||||||    
T  41926823 tgagcttagctcagttggtaaggacaatgcataatatatgtaaggtccgggtt 41926875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 51458679 - 51458731
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  51458679 tgagcttagctcagttggtatggacaatacataaaatatgcaaggtccgggtt 51458731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 35021527 - 35021477
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  35021527 tgagcttagctcagttgatatggacaatacataaaatatgcaaggttcggg 35021477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 9946428 - 9946478
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  9946428 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggg 9946478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 11949826 - 11949773
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  11949826 tcatgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggg 11949773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 24885860 - 24885807
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggttt 103  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||||| ||||    
T  24885860 tgagcttaactcagttggtatggacaatacataaaatatgcaaggtccgagttt 24885807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 39171430 - 39171385
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  39171430 tgagcttagctcagttgatatggacaatgcataaaatatgcaaggt 39171385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 43374332 - 43374287
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  43374332 tgagcttagctcagttgatatggacaatgcataaaatatgcaaggt 43374287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 32139340 - 32139391
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaa-atatgcaaggtccggg 100  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||||||    
T  32139340 tgagcttagctcagttgatagggacaatacataaatatatgcaaggtccggg 32139391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 675911 - 675969
Alignment:
Q  42 tgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||| |||||||||||||||||||   |||||||| ||||| ||||||||||||||||    
T  675911 tgtttgcatgagcttagctcagttggtttggacaatgcataatatatgcaaggtccggg 675969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 5924650 - 5924700
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||||||||| ||||| ||||||||||    
T  5924650 tgagcttagctcagttgctatggacaatacataatatatggaaggtccggg 5924700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 7371608 - 7371558
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||| | ||||||||||||| ||||||||||||||||    
T  7371608 tgagcttaactcagttgataaggacaatacataatatatgcaaggtccggg 7371558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 20383489 - 20383539
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  20383489 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggg 20383539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 35287567 - 35287517
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||| ||||| ||||||||||||||||||||||    
T  35287567 tgagcttagctcagttggtatgaacaatgcataaaatatgcaaggtccggg 35287517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 56565043 - 56564997
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  56565043 tgagcttagctcaattgatatggacaatgcataaaatatgcaaggtc 56564997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 36203237 - 36203285
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||| | ||||||| ||||| ||||||||||||||    
T  36203237 tgagcttagctcagttgataaggacaatgcataatatatgcaaggtccg 36203285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 46676560 - 46676508
Alignment:
Q  48 catgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  46676560 catgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggg 46676508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 47814309 - 47814261
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||  |||||||| |||||| ||||||||||||||||    
T  47814309 agcttagctcagttggtatggacaacacataatatatgcaaggtccggg 47814261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 12439661 - 12439720
Alignment:
Q  46 ttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtttga 105  Q
    ||||||| |||||||||||||| | ||||||| ||||| ||||||||||| ||| |||||    
T  12439661 ttcatgaacttagctcagttgataaggacaatgcataatatatgcaaggttcggatttga 12439720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 19347374 - 19347335
Alignment:
Q  55 ttagctcagttgaaatggacaatacataaaatatgcaagg 94  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  19347374 ttagctcagttgatatggacaatgcataaaatatgcaagg 19347335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 19588155 - 19588202
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    ||||||||||||| |||  ||||||||| |||||||||||||||||||    
T  19588155 tgagcttagctcaattggtatggacaatgcataaaatatgcaaggtcc 19588202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 31780746 - 31780793
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    |||||||||||||||||  | ||||||| |||||||||||||||||||    
T  31780746 tgagcttagctcagttggtaaggacaatgcataaaatatgcaaggtcc 31780793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 38453266 - 38453313
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    |||||||||||||||||  ||||||||| ||||| |||||||||||||    
T  38453266 tgagcttagctcagttggcatggacaatgcataatatatgcaaggtcc 38453313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 2186393 - 2186347
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||    
T  2186393 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 2186347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 3936628 - 3936678
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||| ||||| ||||| ||||||||||||||||    
T  3936628 tgagcttagctcagttggtatgaacaatgcataatatatgcaaggtccggg 3936678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 7230281 - 7230331
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  7230281 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggg 7230331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 10303571 - 10303521
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||| ||||||||||||||| ||||||    
T  10303571 tgagcttagctcagttggtaaggacaatgcataaaatatgcaagatccggg 10303521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 10497260 - 10497310
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||| |||  ||||||||| |||||||||||||| |||||||    
T  10497260 tgagcttagctcaattggtatggacaatgcataaaatatgcaaagtccggg 10497310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 12698598 - 12698644
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||    
T  12698598 tgagcttagctcagttgatttggacaatgcataatatatgcaaggtc 12698644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 16431621 - 16431663
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||  ||||||||| ||||||||||||||||||    
T  16431621 cttagctcagttggtatggacaatgcataaaatatgcaaggtc 16431663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 19479537 - 19479487
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||||||||||    
T  19479537 tgagcttagctcagttaatatgaacaatgcataatatatgcaaggtccggg 19479487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 19854566 - 19854616
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||| ||||||    
T  19854566 tgagcttagctcagttggtatggacaatgcataatatatgcaagatccggg 19854616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 20799454 - 20799404
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  20799454 tgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggg 20799404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 24665051 - 24665001
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||| ||| ||||| ||||||||||||||||    
T  24665051 tgagcttagctcagttggtatggagaatgcataatatatgcaaggtccggg 24665001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 42845026 - 42845076
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| |||||||| || ||||||| ||||| ||||||||||||||||    
T  42845026 tgagcttaactcagttggaaaggacaatgcataatatatgcaaggtccggg 42845076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 43702389 - 43702343
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||| ||||||||||||| | ||||||||||||| ||||||||||||    
T  43702389 tgaggttagctcagttgatagggacaatacataatatatgcaaggtc 43702343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 49021767 - 49021813
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  49021767 tgagtttagcgcagttggtatggacaatacataaaatatgcaaggtc 49021813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 52270090 - 52270044
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||    
T  52270090 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 52270044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 2430998 - 2431043
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||| ||||||||||||  || ||||||||||||||||||||||||    
T  2430998 tgagtttagctcagttggtattgacaatacataaaatatgcaaggt 2431043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 7030953 - 7030904
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||| ||||||||  || |||||| |||||||||||||||||||||    
T  7030953 tgagcttaactcagttggtatagacaatgcataaaatatgcaaggtccgg 7030904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 9196210 - 9196275
Alignment:
Q  46 ttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc-gggtttgagcctc 110  Q
    |||||||||||| || |||||| ||||||||| ||||| |||||| |||||| |||||||| ||||    
T  9196210 ttcatgagcttaacttagttgatatggacaatgcataatatatgccaggtccagggtttgaacctc 9196275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 16304153 - 16304108
Alignment:
Q  55 ttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  16304153 ttagctcagttggtatggacaatgcataatatatgcaaggtccggg 16304108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 16585005 - 16584964
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||||| |||| ||||||||| |||||||||||||||||    
T  16585005 cttagctcaattgatatggacaatgcataaaatatgcaaggt 16584964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 21991307 - 21991258
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||| || |||||  ||||||||| |||||||||||||||||||||    
T  21991307 tgagcttatcttagttggtatggacaatgcataaaatatgcaaggtccgg 21991258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 22040656 - 22040701
Alignment:
Q  55 ttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| ||||    
T  22040656 ttagctcagttgatatggacaatgcataatatatgcaaggttcggg 22040701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 38340380 - 38340335
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||| ||||||||  ||||||||||||||||||||| |||||    
T  38340380 tgagcttaactcagttggtatggacaatacataaaatatgtaaggt 38340335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 42773053 - 42773098
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||| || ||||||||| ||||||||||||||||||||| |||||    
T  42773053 tgagcataactcagttgatatggacaatacataaaatatgtaaggt 42773098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 241442 - 241394
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||| ||||  ||| ||||| ||||||||||||||||||||||    
T  241442 agcttagctcggttggtatgaacaatgcataaaatatgcaaggtccggg 241394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 4963412 - 4963360
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||| |||||||| |||| |||||||| |||||||||||| |||||| |||||    
T  4963412 tgagtttagctcaattgatatggacaacacataaaatatgtaaggtcggggtt 4963360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 9539253 - 9539213
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgc 90  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  9539253 tgagcttagctcagttgttatggacaatgcataaaatatgc 9539213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 11198327 - 11198379
Alignment:
Q  48 catgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||| |||||||||||  |||||||||  ||||| ||||||||||||||||    
T  11198327 catgagtttagctcagttagaatggacaaggcataatatatgcaaggtccggg 11198379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 25978319 - 25978366
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||||||||    
T  25978319 tgagcttagctcagttgtaa-ggacaatgcataatatatgcaaggtccg 25978366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 30848042 - 30847994
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||| ||||||||   |||||||| ||||||||||||||||||||    
T  30848042 tgagcttaactcagttggtttggacaatgcataaaatatgcaaggtccg 30847994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 49308823 - 49308867
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||| | ||||||| ||||| ||||||||||||    
T  49308823 agcttagctcagttgacaaggacaatgcataatatatgcaaggtc 49308867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 2554272 - 2554226
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  2554272 tgagcttagctcagttgatatggacaatacataaaatatgcaaggtc 2554226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 39433411 - 39433457
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  39433411 tgagcttagctcagttgatatgaacaatacataaaatatgcaaggtc 39433457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 27718954 - 27718905
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  27718954 tgagcttagctcagttgatatggacaatgcataatatatgcaaggtccgg 27718905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 6314383 - 6314335
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||||    
T  6314383 tgagcttagctcagttgataaggacaatgcataaaatatgcaaggtccg 6314335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 9656060 - 9656009
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    ||||||||||||||||||||  | ||||||| ||||||||||||||||||||    
T  9656060 tcatgagcttagctcagttggtaaggacaatgcataaaatatgcaaggtccg 9656009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 24195254 - 24195300
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  24195254 cttagctcagttgatatgaacaatacataatatatgcaaggtccggg 24195300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 11771710 - 11771775
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtttgagcctccaccacc 117  Q
    |||||||||||||||| |  |||||||||||| |||||||||||||| ||| || |||| ||||||    
T  11771710 agcttagctcagttgatagagacaatacataatatatgcaaggtccgagttcgaacctcgaccacc 11771775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 30427732 - 30427784
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||| ||||    
T  30427732 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtccaggtt 30427784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 29499772 - 29499819
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    ||||||||||||| |||  ||||||||| |||||||||||||||||||    
T  29499772 tgagcttagctcaattggtatggacaatgcataaaatatgcaaggtcc 29499819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 8461901 - 8461847
Alignment:
Q  45 tttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||| |||||||||||||||||    ||||||| |||||||||||||||||||||    
T  8461901 tttcgtgagcttagctcagttggttgggacaatgcataaaatatgcaaggtccgg 8461847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 10982719 - 10982777
Alignment:
Q  42 tgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||| |||||||| ||||||||  |||||||||| |||| ||||||||||| ||||    
T  10982719 tgttttcgtgagcttaactcagttggtatggacaatatataatatatgcaaggttcggg 10982777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 17898080 - 17898130
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||  |||||||| |||||| ||||||||||||||||    
T  17898080 tgagcttaactcagttggtatggacaaaacataatatatgcaaggtccggg 17898130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 19163596 - 19163546
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| |||||  |||||||||||||||    
T  19163596 tgagcttagctcagttggtatggacaatgcataatttatgcaaggtccggg 19163546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 19778066 - 19778116
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  19778066 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggg 19778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 32051592 - 32051542
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||   |||||||| ||||| ||||||||||||||||    
T  32051592 tgagcttagctcagttggtttggacaatgcataatatatgcaaggtccggg 32051542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 32421570 - 32421620
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||  |||||||||| |||| ||||||||||||||||    
T  32421570 tgagcttaactcagttggtatggacaatatataatatatgcaaggtccggg 32421620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 40679785 - 40679739
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||  |||| ||||| |||||||||||||||||||||    
T  40679785 cttagctcagttggtatggtcaatatataaaatatgcaaggtccggg 40679739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 40795378 - 40795428
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||  ||| ||||||||||| ||||||||||||||||    
T  40795378 tgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggg 40795428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 574385 - 574434
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||||||||| || |||||| ||||| ||||| |||||||||    
T  574385 tgagcttagctcagttgatatagacaatgcataatatatgtaaggtccgg 574434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 7987790 - 7987737
Alignment:
Q  49 atgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    ||||||||| |||| |||  | ||||||||||||| ||||||||||||||||||    
T  7987790 atgagcttaactcaattgctaaggacaatacataatatatgcaaggtccgggtt 7987737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 13004159 - 13004208
Alignment:
Q  43 gttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaa 92  Q
    |||||| |||||||| ||||||||  ||||||||| ||||||||||||||    
T  13004159 gttttcgtgagcttaactcagttggtatggacaatgcataaaatatgcaa 13004208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 17062399 - 17062354
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||| ||||||||| || |||||||||||| |||||||||||    
T  17062399 tgagcttaactcagttgatatagacaatacataatatatgcaaggt 17062354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 17585959 - 17586004
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||| ||||||||| || |||||||||||| |||||||||||    
T  17585959 tgagcttaactcagttgatatagacaatacataatatatgcaaggt 17586004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 37872185 - 37872230
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||||||||| |||  || ||||||||||||||||||||||||    
T  37872185 tgagcttagctcaattgctatagacaatacataaaatatgcaaggt 37872230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 37872978 - 37873023
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  |||| |||| |||||||||||||||||    
T  37872978 tgagcttagctcagttggtatggtcaatgcataaaatatgcaaggt 37873023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 43962081 - 43962036
Alignment:
Q  53 gcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    ||||||||||||||  | ||||||||||||| ||||||||||||||    
T  43962081 gcttagctcagttggtaaggacaatacataatatatgcaaggtccg 43962036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 5907000 - 5907036
Alignment:
Q  59 ctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||| |||| |||||||||||||||||||||||    
T  5907000 ctcagttggaatgtacaatacataaaatatgcaaggt 5907036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 8137938 - 8137978
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaa 92  Q
    |||||||||||||||  ||||||||| ||||||||||||||    
T  8137938 agcttagctcagttggtatggacaatgcataaaatatgcaa 8137978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 11708987 - 11709035
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||  | ||||||| ||||| ||||||||||||||    
T  11708987 tgagcttagctcagttggtagggacaatgcataatatatgcaaggtccg 11709035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 12800950 - 12800910
Alignment:
Q  60 tcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||    
T  12800950 tcagttggtatggacaatacataatatatgcaaggtccggg 12800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 13286132 - 13286184
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||||||  || |||||| ||||| ||||||||| ||||||||    
T  13286132 tgagcttagctcagttggtatagacaatgcataatatatgcaagatccgggtt 13286184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 23852912 - 23852960
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    ||||||||||||||| |  ||||||||| ||||| ||||||||||||||    
T  23852912 tgagcttagctcagtcggtatggacaatgcataatatatgcaaggtccg 23852960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 25136904 - 25136856
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    ||||| |||||||||||  ||||||||  ||||||||||||||||||||    
T  25136904 tgagcatagctcagttggtatggacaaggcataaaatatgcaaggtccg 25136856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 26991820 - 26991772
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||| || |||||||||| ||||||||| ||||| |||||||||||    
T  26991820 tcatgagtttggctcagttgatatggacaatgcataatatatgcaaggt 26991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 26320623 - 26320571
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  26320623 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccgggtt 26320571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 18256884 - 18256936
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||||||| | ||||||| ||||| ||||||||||||||||||    
T  18256884 tgagcttagctcagttgataaggacaatgcataatatatgcaaggtccgggtt 18256936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 14297017 - 14296967
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||| |||||  ||||||||||||||||||||| ||||||||||    
T  14297017 tgagcttagctgagttggtatggacaatacataaaatatgtaaggtccggg 14296967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 20720849 - 20720791
Alignment:
Q  42 tgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||| |||||||||||||||||  ||||||||| ||||| ||||| ||||||||||    
T  20720849 tgttttcgtgagcttagctcagttgttatggacaatgcataatatatgtaaggtccggg 20720791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 26400865 - 26400915
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||| |||  ||||||||||||||| ||||||||||||||||    
T  26400865 tgagcttagctcaattggtatggacaatacataatatatgcaaggtccggg 26400915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 16130766 - 16130819
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggttt 103  Q
    ||||||||||| |||||  ||||||||| |||||||||||||||||||| ||||    
T  16130766 tgagcttagcttagttggtatggacaatgcataaaatatgcaaggtccgagttt 16130819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 20847571 - 20847519
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    ||||||||||||||||    |||||||| ||||||||||||||||||||||||    
T  20847571 tgagcttagctcagttagtttggacaatgcataaaatatgcaaggtccgggtt 20847519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 12333628 - 12333581
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    ||||||||||||||||   ||||||||| |||||||||||||||||||    
T  12333628 tgagcttagctcagttagtatggacaatgcataaaatatgcaaggtcc 12333581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 655809 - 655759
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  || |||||| ||||| ||||||||||||||||    
T  655809 tgagcttagctcagttggtatcgacaatgcataatatatgcaaggtccggg 655759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 4450263 - 4450313
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||| |  |||||| ||||| ||||||||||||||||    
T  4450263 tgagcttagctcagttgataaagacaatgcataatatatgcaaggtccggg 4450313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 4494931 - 4494885
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||  ||||||||| |||||||||||| |||||    
T  4494931 tgagcttagctcagttggtatggacaatgcataaaatatgcgaggtc 4494885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 6864195 - 6864145
Alignment:
Q  48 catgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||| ||||||||||| ||||||| ||||| ||||||||| ||||    
T  6864195 catgagcttaactcagttgaaaaggacaatgcataatatatgcaagatccg 6864145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 7081714 - 7081668
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||| |  |||||||||||| ||||||||||||    
T  7081714 tgagcttagctcagttgataaagacaatacataatatatgcaaggtc 7081668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 20744139 - 20744185
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||    
T  20744139 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 20744185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 21847195 - 21847245
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||||||||| ||||||||||| ||||    
T  21847195 tgagcttagctcagttggtagggacaatacataatatatgcaaggtacggg 21847245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 24269884 - 24269934
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||||||   ||||||||| ||||||||||||||||| ||||    
T  24269884 tgagcttagctcagttagtatggacaatgcataaaatatgcaaggttcggg 24269934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 28231485 - 28231435
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||| |||||||||| | ||||||| ||||| ||||||||||||||||    
T  28231485 tgagcttggctcagttgatagggacaatgcataatatatgcaaggtccggg 28231435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 33824886 - 33824932
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||| | ||||||| ||||| ||||||||||||||||    
T  33824886 cttagctcagttgataaggacaatgcataatatatgcaaggtccggg 33824932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 2931411 - 2931366
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||    
T  2931411 tgagcttagctcagttgattgggagaatacataaaatatgcaaggt 2931366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 11982552 - 11982601
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||||  ||  ||||||||||||||| |||||||||||||||    
T  11982552 tgagcttagctcaaatggtatggacaatacataatatatgcaaggtccgg 11982601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 12329277 - 12329322
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  ||| ||||||||||||||||| |||||    
T  12329277 tgagcttagctcagttgttatgaacaatacataaaatatgtaaggt 12329322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 13496117 - 13496166
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||| ||||||||| ||| ||||| ||||| |||||||||||||||    
T  13496117 tgagcttaactcagttgatatgaacaatgcataatatatgcaaggtccgg 13496166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 32053789 - 32053834
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  ||||||||| ||||| |||||||||||    
T  32053789 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 32053834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 33938739 - 33938686
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggttt 103  Q
    |||||||||||||||||  ||| ||||| ||||| ||||||||||| |||||||    
T  33938739 tgagcttagctcagttggtatgaacaatgcataatatatgcaaggttcgggttt 33938686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 21373466 - 21373414
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||| |||||||| |||  ||||||||| ||||||||||||||||||| ||||    
T  21373466 tgagtttagctcaattggtatggacaatgcataaaatatgcaaggtccaggtt 21373414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 24827055 - 24827091
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatat 88  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  24827055 agcttagctcagttgatatggacaatgcataaaatat 24827091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 27908009 - 27907965
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||| | ||| ||| ||||||||||||||||||    
T  27908009 agcttagctcagttgacaaggataatgcataaaatatgcaaggtc 27907965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 1529 - 1579
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  1529 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggg 1579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 47309 - 47255
Alignment:
Q  42 tgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    ||||||| |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  47309 tgttttcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 47255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 19416515 - 19416565
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  19416515 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggg 19416565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 10244728 - 10244778
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  10244728 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggg 10244778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 45046275 - 45046225
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||| |||||||||||| ||||||| ||||||| ||||||||||||||||    
T  45046275 tgagcatagctcagttgatatggacagtacataatatatgcaaggtccggg 45046225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 9893140 - 9893095
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||| |||| |||| |||||||||||||||||||||||||||    
T  9893140 tgagcttatctcaattgatatggacaatacataaaatatgcaaggt 9893095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 33610989 - 33610936
Alignment:
Q  46 ttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||||||||||||  | ||||||| ||||| |||||||||||||||    
T  33610989 ttcatgagcttagctcagttgttacggacaatgcataatatatgcaaggtccgg 33610936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 18505717 - 18505665
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||||||  | ||||||| ||||||||||||||| ||||||||    
T  18505717 tgagcttagctcagttggtagggacaatgcataaaatatgcaagatccgggtt 18505665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 39043750 - 39043806
Alignment:
Q  44 ttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||| ||||||||  ||||||||| ||||| |||||| |||||||||    
T  39043750 ttttcatgagcttaactcagttggtatggacaatgcataatatatgctaggtccggg 39043806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 46207761 - 46207813
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||||||  ||| ||||| |||||||||||||| |||||||||    
T  46207761 tgagcttagctcagttggtatgaacaatgcataaaatatgcaatgtccgggtt 46207813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 3672612 - 3672569
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaag 93  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||    
T  3672612 tgagtttagctcagttgatatggacaatacataatatatgcaag 3672569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 20243256 - 20243307
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataa-aatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||| |||||||||||||||||    
T  20243256 tgagcttagctcagttggtatggacaatgcataataatatgcaaggtccggg 20243307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 25288671 - 25288714
Alignment:
Q  56 tagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||    
T  25288671 tagctcagttgatatggacaatgcataagatatgcaaggtccgg 25288714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 15492347 - 15492305
Alignment:
Q  51 gagcttagctcagttgaaatggacaatacataaaatatgcaag 93  Q
    ||||||||||||||||| |||||||||  ||||||||||||||    
T  15492347 gagcttagctcagttgatatggacaatgtataaaatatgcaag 15492305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 27462496 - 27462446
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||| |||||||||||  ||||||||| ||||| ||||||||||||||||    
T  27462496 tgagcatagctcagttggtatggacaatgcataatatatgcaaggtccggg 27462446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 35142209 - 35142167
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaa 92  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||    
T  35142209 tgagcttagctcagttgatatggacaatgcataatatatgcaa 35142167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 39801707 - 39801757
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||| ||||||    
T  39801707 tgagcttagctcagttggtatggacaatgcataatatatgcaagatccggg 39801757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 40752899 - 40752849
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||||||   ||||||||||||||| |||||||| |||||||    
T  40752899 tgagcttagctcagttagtatggacaatacataatatatgcaatgtccggg 40752849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 46987087 - 46987137
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  46987087 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggg 46987137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 429238 - 429193
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  429238 tgagcttaactcagttgatatggataatacataatatatgcaaggt 429193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 580986 - 580937
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||| ||||  ||||||||| ||||||||||||||| |||||    
T  580986 tgagcttagctcggttggtatggacaatgcataaaatatgcaagatccgg 580937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 1311854 - 1311817
Alignment:
Q  58 gctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  1311854 gctcagttgatatggacaatgcataaaatatgcaaggt 1311817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 13044202 - 13044157
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  | ||||||| |||||||||||||||||    
T  13044202 tgagcttagctcagttggtaaggacaatgcataaaatatgcaaggt 13044157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 13955481 - 13955526
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  ||| ||||| |||||||||||||||||    
T  13955481 tgagcttagctcagttggtatgaacaatgcataaaatatgcaaggt 13955526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 15433518 - 15433473
Alignment:
Q  51 gagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    ||||||||||||||||| |||||||||  |||| ||||||||||||    
T  15433518 gagcttagctcagttgatatggacaattaataatatatgcaaggtc 15433473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 21050282 - 21050229
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggttt 103  Q
    |||||||||||||||||  | ||||||| ||||| |||||||||||| ||||||    
T  21050282 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtctgggttt 21050229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 21286352 - 21286397
Alignment:
Q  51 gagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||| |||  ||||||||||||||| ||||||||||||    
T  21286352 gagcttagctcaattggtatggacaatacataatatatgcaaggtc 21286397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 21993183 - 21993235
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggttt 103  Q
    |||||||| ||||||||  ||||||||| |||||||||||||||| ||||||||    
T  21993183 tgagcttaactcagttggtatggacaatgcataaaatatgcaagg-ccgggttt 21993235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 26471219 - 26471256
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatg 89  Q
    |||||||||||||||  |||||||||||||||||||||    
T  26471219 agcttagctcagttggtatggacaatacataaaatatg 26471256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 26547659 - 26547696
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatg 89  Q
    |||||||||||||||  |||||||||||||||||||||    
T  26547659 agcttagctcagttggtatggacaatacataaaatatg 26547696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 41132445 - 41132490
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||||||||| ||||  || |||||||||||||||||||||||    
T  41132445 tgagcttagctcaattgatttgaacaatacataaaatatgcaaggt 41132490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 42096006 - 42095953
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||| |||| | |||||| || ||||| ||||||||||||||||    
T  42096006 tcatgagcttagcttagtttatatggaccatgcataatatatgcaaggtccggg 42095953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 47342682 - 47342723
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||  ||||||||| |||||||||||||||||    
T  47342682 cttagctcagttggtatggacaatgcataaaatatgcaaggt 47342723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 48527191 - 48527240
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||| ||||||||| | ||||||| ||||| |||||||||||||||    
T  48527191 tgagcttatctcagttgataaggacaatgcataatatatgcaaggtccgg 48527240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 3953442 - 3953494
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    ||||||||||||||| |  ||||||||| ||||| ||||||||||| ||||||    
T  3953442 tgagcttagctcagtcggtatggacaatgcataatatatgcaaggttcgggtt 3953494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 5352330 - 5352378
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||  | ||||||||||||| |||| |||||||||    
T  5352330 tgagcttagctcagttggtaaggacaatacataatatatacaaggtccg 5352378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 8615024 - 8615072
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||  | ||||||| ||||| ||||||||||||||    
T  8615024 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccg 8615072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 18714451 - 18714499
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  18714451 agcttagctcagttggtaaggacaatgcataatatatgcaaggtccggg 18714499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 18773806 - 18773766
Alignment:
Q  60 tcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||| ||||||||||| ||||||||||    
T  18773806 tcagttgatatggacaatgcataaaatatgtaaggtccggg 18773766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 24656970 - 24657018
Alignment:
Q  49 atgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    ||||||||||||||||||  ||||| ||| ||||||||||| |||||||    
T  24656970 atgagcttagctcagttggtatggataatgcataaaatatgtaaggtcc 24657018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 35224140 - 35224172
Alignment:
Q  71 ggacaatacataaaatatgcaaggtccgggttt 103  Q
    ||||||| |||||||||||||||||||||||||    
T  35224140 ggacaatgcataaaatatgcaaggtccgggttt 35224172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 36428149 - 36428201
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||| ||||||||  |||||||||  ||||||||||||||||| |||||    
T  36428149 tgagcttaactcagttggtatggacaatgtataaaatatgcaaggtcggggtt 36428201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 41527561 - 41527609
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    ||||||||||| |||||  ||||||||| ||||| ||||||||||||||    
T  41527561 tgagcttagcttagttggtatggacaatgcataatatatgcaaggtccg 41527609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 44406916 - 44406868
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||    ||||||| ||||||||||||||||||||    
T  44406916 tgagcttagctcagttggttgggacaatgcataaaatatgcaaggtccg 44406868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 47342497 - 47342445
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    ||||||||||| ||||||||   |||||||| ||||| |||||||||||||||    
T  47342497 tcatgagcttaactcagttggtttggacaatgcataatatatgcaaggtccgg 47342445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 10704391 - 10704341
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  10704391 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggg 10704341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 28207133 - 28207181
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  28207133 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccg 28207181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 6624777 - 6624827
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  6624777 tgagcttagctcagttggcatggacaatgcataatatatgcaaggtccggg 6624827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 16036829 - 16036875
Alignment:
Q  51 gagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||    
T  16036829 gagcttagctcagttggcatggacaatacataatatatgcaaggtcc 16036875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 18331708 - 18331758
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||| |||  ||||||||| ||||||||||||||||||||||    
T  18331708 tgagcttagctcacttggtatggacaatgcataaaatatgcaaggtccggg 18331758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 26655457 - 26655515
Alignment:
Q  42 tgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||| ||||||||||  ||||||||| ||||| ||||| ||||||||||    
T  26655457 tgttttcatgagctcagctcagttggtatggacaatgcataatatatgtaaggtccggg 26655515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 26927042 - 26927100
Alignment:
Q  42 tgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||| ||||||||||  ||||||||| ||||| ||||| ||||||||||    
T  26927042 tgttttcatgagctcagctcagttggtatggacaatgcataatatatgtaaggtccggg 26927100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 32200507 - 32200457
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||| | ||||||| ||||| ||||||||||||||||    
T  32200507 tgagcttagctcagttgacagggacaatgcataatatatgcaaggtccggg 32200457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 37932331 - 37932381
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  37932331 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggg 37932381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 40716009 - 40715959
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||| |||| ||||||||| ||||| ||||||||||||||||    
T  40716009 tgagcttagctcaattgatatggacaatgcataatatatgcaaggtccggg 40715959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 39980509 - 39980558
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||||||||  ||||| ||| |||||||||||||||||||||    
T  39980509 tgagcttagctcagttggtatggataatgcataaaatatgcaaggtccgg 39980558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 18391601 - 18391649
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||  | ||||||| ||||||||||||||||||||    
T  18391601 tgagcttagctcagttggtaaggacaatgcataaaatatgcaaggtccg 18391649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 20721053 - 20721101
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||| ||||||||  ||||||||||||||| ||||||||||||||||    
T  20721053 agcttaactcagttggtatggacaatacataatatatgcaaggtccggg 20721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 20927640 - 20927688
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||  ||||||||||||||| ||||||||| ||||    
T  20927640 tgagcttagctcagttggtatggacaatacataatatatgcaagatccg 20927688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 31561404 - 31561348
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataa-aatatgcaaggtccgggtttga 105  Q
    |||||||| ||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  31561404 tgagcttaactcagttggtatggacaatgcataataatatgcaaggtccgggtttga 31561348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 32858671 - 32858723
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||| ||||  ||||||||| |||||||||||||||||| |||||    
T  32858671 tgagcttagctccgttggtatggacaatgcataaaatatgcaaggtcagggtt 32858723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 2089348 - 2089309
Alignment:
Q  62 agttgaaatggacaatacataaaatatgcaaggtccgggt 101  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  2089348 agttgatatggacaatacataaaatatgcaaagtccgggt 2089309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 8024403 - 8024458
Alignment:
Q  51 gagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc-gggtttga 105  Q
    |||||||| |||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  8024403 gagcttagttcagttggtatggacaatacattaaatatgcaaggtcctgggtttga 8024458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 13880197 - 13880236
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatg 89  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  13880197 tgagcttagttcagttgatatggacaatacataaaatatg 13880236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 6375524 - 6375566
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaa 92  Q
    |||||||||||||||||  | ||||||||||||||||||||||    
T  6375524 tgagcttagctcagttggtaaggacaatacataaaatatgcaa 6375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 11637632 - 11637582
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||  ||||||||| ||||||||||||||||| ||||    
T  11637632 tgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggg 11637582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 13864345 - 13864395
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||  ||| ||||||||||| ||||||||||||||||    
T  13864345 tgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggg 13864395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 22522861 - 22522811
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||| ||||  ||||||||| ||||| ||||||||||||||||    
T  22522861 tgagcttagctcggttggtatggacaatgcataatatatgcaaggtccggg 22522811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 22555232 - 22555282
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||  ||||||||| |||| |||||||||||||||||    
T  22555232 tgagcttaactcagttggtatggacaatgcatataatatgcaaggtccggg 22555282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 25604060 - 25604010
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||| ||||||| | ||||| ||||||||||| ||||    
T  25604060 tgagcttagctcagttgatatggacagtgcataatatatgcaaggttcggg 25604010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 26409254 - 26409304
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||| ||||| ||||||||||    
T  26409254 tgagcttagctcagttggtatggacaatgcataatatatgtaaggtccggg 26409304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 34191434 - 34191484
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||    ||||||| ||||||||||||||||||||||    
T  34191434 tgagcttagctcagttggttgggacaatgcataaaatatgcaaggtccggg 34191484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 39610401 - 39610359
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaa 92  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||    
T  39610401 tgagcttagctcagttgatatggacaatgcataatatatgcaa 39610359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 40837959 - 40837913
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||| ||||||||  |||||||||| |||||||||||||||||||||    
T  40837959 cttaactcagttggtatggacaatatataaaatatgcaaggtccggg 40837913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 8545049 - 8545000
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||| ||||||||| | ||||||| ||||| |||||||||||||||    
T  8545049 tgagcttaactcagttgataaggacaatgcataatatatgcaaggtccgg 8545000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 9893730 - 9893685
Alignment:
Q  51 gagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    ||||||||||||||||| || || ||| ||||||||||||||||||    
T  9893730 gagcttagctcagttgatatagataatgcataaaatatgcaaggtc 9893685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 17708075 - 17708120
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||| || ||||||||| ||||||||| |||||||||||||||||    
T  17708075 tgagcataactcagttgatatggacaatgcataaaatatgcaaggt 17708120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 18147708 - 18147769
Alignment:
Q  39 ttgtgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||| |||||||| ||||||||||||| | ||||||| ||||| ||||||| | ||||||    
T  18147708 ttgtgtcttcatgagtttagctcagttgataaggacaatgcataatatatgcaggatccggg 18147769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 35412965 - 35413010
Alignment:
Q  57 agctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    ||||||||| | ||||||||| ||||| ||||||||||||||||||    
T  35412965 agctcagttaatatggacaatgcataatatatgcaaggtccgggtt 35413010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 22394036 - 22394084
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||| ||||||||| ||||| ||||| ||| ||||    
T  22394036 tgagcttagctcagttgatatggacaatgcataatatatgtaagatccg 22394084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 24485700 - 24485752
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    ||||||||||| |||||  ||||||||| ||||| ||||||||||| ||||||    
T  24485700 tgagcttagcttagttggtatggacaatgcataatatatgcaaggttcgggtt 24485752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 41650999 - 41650951
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||| ||||||||  ||||||||| ||||| ||||||||||||||    
T  41650999 tgagcttaactcagttggtatggacaatgcataatatatgcaaggtccg 41650951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 25340984 - 25340934
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  25340984 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggg 25340934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 32629081 - 32629131
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  32629081 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggg 32629131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 44579637 - 44579687
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  44579637 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggg 44579687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 20370341 - 20370296
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  20370341 tgagcttagctcagttgatatggacaatgcataaaatatgcaaggt 20370296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 14827526 - 14827576
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  14827526 tgagcttagctcagttggtatggacaatgcataaaatatgcaagatccggg 14827576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 21506818 - 21506772
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  21506818 tgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 21506772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 33745100 - 33745146
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  33745100 tgagcttagctcaattgatatggacaatgcataaaatatgcaaggtc 33745146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 51505873 - 51505919
Alignment:
Q  49 atgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  51505873 atgagtttagctcagttgatatggacaatgcataaaatatgcaaggt 51505919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 29631184 - 29631237
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||||||||||  ||||||||| ||||| ||||||||||| ||||    
T  29631184 tcatgagcttagctcagttggtatggacaatgcataatatatgcaaggttcggg 29631237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 53162199 - 53162244
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||    
T  53162199 tgagcttagctcaattgatatggacaatgcataaaatatgcaaggt 53162244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 7757081 - 7757129
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||| |||||||  |||||||||| ||||||||||||||||    
T  7757081 tcatgagcttagttcagttggtatggacaatatataaaatatgcaaggt 7757129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 665976 - 666015
Alignment:
Q  60 tcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  665976 tcagttggtatggacaatacataaaatatgcaaggtccgg 666015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 977999 - 977952
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||||||  ||||||||| ||||| |||||||||||||||    
T  977999 agcttagctcagttggtatggacaatgcataatatatgcaaggtccgg 977952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 33404229 - 33404268
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatg 89  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  33404229 tgagcttagctcagttgatatggacaatacataatatatg 33404268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 38034866 - 38034819
Alignment:
Q  53 gcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||    
T  38034866 gcttagctcagttggttgggacaatacataaaatatgcaaggtccggg 38034819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 38894037 - 38894088
Alignment:
Q  49 atgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||| |||||||||||||| ||| |||||  |||||||||||||||||||||    
T  38894037 atgaacttagctcagttgatatgaacaatgtataaaatatgcaaggtccggg 38894088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 7738670 - 7738720
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||  | ||||||| ||||||||||||||||||||||    
T  7738670 tgagcttaactcagttggtagggacaatgcataaaatatgcaaggtccggg 7738720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 10498755 - 10498709
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||    
T  10498755 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 10498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 21331477 - 21331427
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||| ||||    
T  21331477 tgagcttagctcagttgttatggacaatgcataatatatgcaaggttcggg 21331427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 21914895 - 21914837
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtttgagcc 108  Q
    |||||||||||||||||  |  ||||||||||||  ||||||||||||||||| |||||    
T  21914895 tgagcttagctcagttggtaatgacaatacataatgtatgcaaggtccgggttcgagcc 21914837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 23148038 - 23147988
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||||||||| |||||| |||||||||    
T  23148038 tgagcttagctcagttggtaaggacaatacataatatatgcgaggtccggg 23147988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 27185478 - 27185524
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||  | ||||||||||||| ||||||||||||    
T  27185478 tgagcttagctcagttggtagggacaatacataatatatgcaaggtc 27185524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 28244164 - 28244114
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||  ||| ||||| ||||||||||||||||||||||    
T  28244164 tgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtccggg 28244114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 30229586 - 30229536
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||| |||  || |||||| ||||||||||||||||||||||    
T  30229586 tgagcttagctcaattggtattgacaatgcataaaatatgcaaggtccggg 30229536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 32843322 - 32843276
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||   |||||||| ||||||||||||||||||    
T  32843322 tgagcttagctcagttggtttggacaatgcataaaatatgcaaggtc 32843276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 38131019 - 38130969
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||  ||||||||| ||||| ||||||||||||||||    
T  38131019 tgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggg 38130969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 42784952 - 42785006
Alignment:
Q  44 ttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||| ||||||||| ||||||||| ||||||||||||||| || || ||||||||    
T  42784952 ttttaatgagcttaactcagttgatatggacaatacataatatgtgtaaggtccg 42785006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 49710712 - 49710770
Alignment:
Q  41 gtgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    ||||| ||||||||||| ||||||||  ||  ||||| |||||||||||||||||||||    
T  49710712 gtgttctcatgagcttaactcagttggtattaacaatgcataaaatatgcaaggtccgg 49710770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 53996300 - 53996346
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||    
T  53996300 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 53996346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 5117209 - 5117254
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||| | ||||||||||||| ||||| |||||    
T  5117209 tgagcttagctcagttgataaggacaatacataatatatgtaaggt 5117254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 20400075 - 20400124
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||| |||||||||||||||| |  |||||||||||| ||||||||||||    
T  20400075 tcataagcttagctcagttgacagagacaatacataatatatgcaaggtc 20400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 20413812 - 20413767
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||| ||||| ||||||||| |||| ||||||    
T  20413812 tgagcttagctcagttgatatggataatacataatatatacaaggt 20413767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 29687083 - 29687128
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||| |||||||||| |||  |||||||||||    
T  29687083 tgagcttagctcagttgatatggacaatatatattatatgcaaggt 29687128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 32836174 - 32836215
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgca 91  Q
    |||||||||||||||||  ||||||||| |||||||||||||    
T  32836174 tgagcttagctcagttggtatggacaatgcataaaatatgca 32836215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 55126007 - 55126052
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||||||||||||||   ||||||||||||| |||||||||||    
T  55126007 tgagcttagctcagttgatgaggacaatacataatatatgcaaggt 55126052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 4216455 - 4216407
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||| | ||||||| ||||| |||||||||||| |||||    
T  4216455 cttagctcagttgataaggacaatgcataatatatgcaaggtcggggtt 4216407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 19468452 - 19468500
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||| ||||||||  ||||||||| ||||| ||||||||||||||    
T  19468452 tgagcttaactcagttggtatggacaatgcataatatatgcaaggtccg 19468500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 22722403 - 22722451
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    ||||||||||||||||   ||| ||||| ||||||||||||||||||||    
T  22722403 tgagcttagctcagttagtatgaacaatgcataaaatatgcaaggtccg 22722451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 35863871 - 35863827
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||  | ||||||||||||| ||||||||||||    
T  35863871 agcttagctcagttggtaaggacaatacataatatatgcaaggtc 35863827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 45096025 - 45096073
Alignment:
Q  48 catgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    ||||| |||||||||||||| | ||||||| ||||| ||||||||||||    
T  45096025 catgaacttagctcagttgataaggacaatgcataatatatgcaaggtc 45096073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 45431951 - 45431999
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  45431951 agcttagctcagttggtagggacaatgcataatatatgcaaggtccggg 45431999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 48531279 - 48531331
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||||||    ||| ||||||||||||||||||||| ||||||    
T  48531279 tgagcttagctcagttggttgggataatacataaaatatgcaaggttcgggtt 48531331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 52575950 - 52575994
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||||    
T  52575950 agcttagctcagttggtatgaacaatgcataaaatatgcaaggtc 52575994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 15427690 - 15427739
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  15427690 tcatgagcttagctcagttgatatggacaatatataatatatgcaaggtc 15427739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 33063987 - 33064036
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  33063987 tgagcttagctcagttgatatggacaatgcataatatatgcaaggtccgg 33064036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 36474764 - 36474813
Alignment:
Q  51 gagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  36474764 gagcttagctcagttgatagggacaatgcataaaatatgcaaggtccggg 36474813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 23756715 - 23756758
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  23756715 agcttagctcagttgatatagacaatacataaaatatgcaaggt 23756758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 24305365 - 24305315
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||| ||||    
T  24305365 tgagcttagctcagttaatatggacaatgcataaaatatgcaaggttcggg 24305315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 25186302 - 25186252
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||| ||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  25186302 tgagtttagctcagttgatatggacaatgcataatatatgcaaggtccggg 25186252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 32513675 - 32513725
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  32513675 tgagcttagctcaggtggtatggacaatacataaaatatgcacggtccggg 32513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 3113790 - 3113737
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||| ||||||| |||||||| | ||||||| ||||||||||||||||||||||    
T  3113790 tcataagcttagttcagttgataaggacaatgcataaaatatgcaaggtccggg 3113737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 22523072 - 22523027
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||    
T  22523072 tgagcttagctcagttggtatggacaatacataatatatgcaaggt 22523027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 32901381 - 32901434
Alignment:
Q  49 atgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    ||||| ||||||||||||| ||||| ||| ||||||||||| ||||||||||||    
T  32901381 atgagtttagctcagttgatatggataatgcataaaatatgaaaggtccgggtt 32901434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 6765613 - 6765661
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||  ||||||||| ||||||||||| ||||||||||    
T  6765613 agcttagctcagttggtatggacaatgcataaaatatgtaaggtccggg 6765661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 7302197 - 7302149
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||||||| | ||||||| |||||||||||||||||| |||||    
T  7302197 cttagctcagttgatagggacaatgcataaaatatgcaaggtctgggtt 7302149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 29734692 - 29734740
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||| ||||||||||||| ||||||||| ||||| ||||||||||||||    
T  29734692 tgagtttagctcagttgatatggacaatgcataatatatgcaaggtccg 29734740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 1861869 - 1861822
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtcc 97  Q
    |||||||||||||| ||| ||||||||| ||||| |||||||||||||    
T  1861869 tgagcttagctcagctgatatggacaatgcataatatatgcaaggtcc 1861822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 9799470 - 9799419
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaa-atatgcaaggtccggg 100  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||| ||||    
T  9799470 tgagcttagcttagttgaaatggacaatgcataaatatatgcaaggttcggg 9799419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 39761439 - 39761494
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtttga 105  Q
    |||| ||||||||||||| | ||||||| ||||| |||||||||||| ||||||||    
T  39761439 tgagtttagctcagttgataaggacaatgcataatatatgcaaggtctgggtttga 39761494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 10991541 - 10991595
Alignment:
Q  48 catgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||||||||| ||||||||  | ||||||||||||| ||||| ||||||||||||    
T  10991541 catgagcttaactcagttggtaaggacaatacataatatatgtaaggtccgggtt 10991595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 11428910 - 11428864
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||| |||| ||| |||||||||| ||||||||||||||||||    
T  11428910 tgagcttaactcaattggaatggacaatgcataaaatatgcaaggtc 11428864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 20455892 - 20455942
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||| |||  ||||||||| ||||| ||||||||||||||||    
T  20455892 tgagcttagctcaattggtatggacaatgcataatatatgcaaggtccggg 20455942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 20565135 - 20565085
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  20565135 tgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggg 20565085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 24593377 - 24593427
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  24593377 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggg 24593427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 27244658 - 27244704
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||| | ||||||| ||||| ||||||||||||    
T  27244658 tgagcttagctcagttgatagggacaatgcataatatatgcaaggtc 27244704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 27411093 - 27411143
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||| ||||||  | ||||| ||||||||||||||||    
T  27411093 tgagcttagctcagttgatatggaccttgcataatatatgcaaggtccggg 27411143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 36359307 - 36359365
Alignment:
Q  42 tgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||| ||||||||||| ||| |||||  |||||||| ||||| ||||||||||||||||    
T  36359307 tgttctcatgagcttaactcggttgatttggacaatgcataatatatgcaaggtccggg 36359365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 39068768 - 39068718
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||| | ||||||| ||||| ||||||||| ||||||    
T  39068768 tgagcttagctcagttgataaggacaatgcataatatatgcaagatccggg 39068718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 41187517 - 41187467
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||| |||||  ||||||||| |||||||||||||| |||||||    
T  41187517 tgagcttagcttagttggtatggacaatgcataaaatatgcaaagtccggg 41187467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 41526836 - 41526790
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||| ||||||||| ||||  ||||||||||||    
T  41526836 tgagcttagctcagttgacatggacaatgcatagtatatgcaaggtc 41526790  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 42066713 - 42066763
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| || || ||||||||||||||||    
T  42066713 tgagcttagctcagttggtatggacaatgcacaatatatgcaaggtccggg 42066763  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 42791296 - 42791346
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||||| ||||  |||||||| ||||| ||||||||||||||||    
T  42791296 tgagcttagctcacttgacttggacaatgcataatatatgcaaggtccggg 42791346  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 44526129 - 44526179
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||| ||| ||||||||||||    
T  44526129 tgagcttagctcagttggtatggacaatgcataatatacgcaaggtccggg 44526179  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 9383269 - 9383224
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  ||||||||| ||||| |||||||||||    
T  9383269 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 9383224  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 9519774 - 9519729
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||||||||| |||| ||||||||| ||||| |||||||||||    
T  9519774 tgagcttagctcaattgatatggacaatgcataatatatgcaaggt 9519729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 9842262 - 9842217
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  | ||||||| |||||||||||||||||    
T  9842262 tgagcttagctcagttggtagggacaatgcataaaatatgcaaggt 9842217  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 10156018 - 10156063
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  | ||||||||||||| |||||||||||    
T  10156018 tgagcttagctcagttggtaaggacaatacataatatatgcaaggt 10156063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 15251899 - 15251854
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||| ||||| |||||| |||||||||| ||||||||||||||||    
T  15251899 tgagcatagcttagttgatatggacaatatataaaatatgcaaggt 15251854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 16221409 - 16221356
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||| ||||||||||||  ||| ||||| ||||||||||||||||| ||||    
T  16221409 tcatgagtttagctcagttggtatgaacaatgcataaaatatgcaaggttcggg 16221356  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 34977205 - 34977254
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgg 99  Q
    |||||||| ||||||||  ||||||||| ||||| |||||||||||||||    
T  34977205 tgagcttaactcagttggtatggacaatgcataatatatgcaaggtccgg 34977254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 45249152 - 45249185
Alignment:
Q  52 agcttagctcagttgaaatggacaatacataaaa 85  Q
    |||||||||||||||| |||||||||||||||||    
T  45249152 agcttagctcagttgatatggacaatacataaaa 45249185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 9547472 - 9547424
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||| |||||| ||||||||| ||||||||| ||||| |||||||||||    
T  9547472 tcataagcttaactcagttgatatggacaatgcataatatatgcaaggt 9547424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 19212956 - 19213004
Alignment:
Q  47 tcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||| ||||||||||||   |||||||||||||| |||||||||||    
T  19212956 tcatgagtttagctcagttgttttggacaatacataatatatgcaaggt 19213004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 22061292 - 22061336
Alignment:
Q  54 cttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    ||||||||| |||  ||| ||||||||||||||||||||||||||    
T  22061292 cttagctcaattggtatgtacaatacataaaatatgcaaggtccg 22061336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 28202298 - 28202346
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    |||||||||||||||||| | ||||||| ||||| ||||| ||||||||    
T  28202298 tgagcttagctcagttgatagggacaatgcataatatatgtaaggtccg 28202346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 30956419 - 30956475
Alignment:
Q  39 ttgtgttttcatgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    ||||||| ||||||||||||||||||||  ||| ||||| ||||  |||||||||||    
T  30956419 ttgtgttctcatgagcttagctcagttggtatgaacaatgcatattatatgcaaggt 30956475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 34464469 - 34464417
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||| ||||||||||||  ||||||||| ||||| ||||||||| ||||||||    
T  34464469 tgagtttagctcagttggtatggacaatgcataatatatgcaagctccgggtt 34464417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 40099445 - 40099397
Alignment:
Q  48 catgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||||||||||||||  | ||||||| ||||| ||||||||||||    
T  40099445 catgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 40099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 41779004 - 41778956
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    ||||| ||||||||||||  |||||||| ||||| ||||||||||||||    
T  41779004 tgagcatagctcagttgatttggacaatgcataatatatgcaaggtccg 41778956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 223159 - 223202
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaag 93  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  223159 tgagcttagctcagttggtatggacaatacataaaatatgcaag 223202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 185264 - 185314
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  185264 tgagcttagctcagttggtatggacaatgcataaaatatgcaagatccggg 185314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 37536 - 37586
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||||||| |||||  ||| ||||| ||||||||||||||||||||||    
T  37536 tgagcttagctaagttggtatgaacaatgcataaaatatgcaaggtccggg 37586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 45413 - 45463
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||   |||||||||||||| ||||||||||||||||    
T  45413 tgagcttaactcagttggtttggacaatacataatatatgcaaggtccggg 45463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 39999 - 40044
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggt 95  Q
    |||||||||||||||||  ||||||||| ||||| |||||||||||    
T  39999 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 40044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 53440 - 53394
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtc 96  Q
    |||||||| |||||||| || ||||||| ||||||||||||||||||    
T  53440 tgagcttaactcagttggaagggacaatgcataaaatatgcaaggtc 53394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 31982 - 31932
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    ||||||| |||||||||| | ||||||| ||||| ||||||||||||||||    
T  31982 tgagcttggctcagttgatagggacaatgcataatatatgcaaggtccggg 31932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 161142 - 161192
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccggg 100  Q
    |||||||| ||||||||  ||||||||| ||||||||||||||||| ||||    
T  161142 tgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggg 161192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 17733 - 17785
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccgggtt 102  Q
    |||| ||||||||||||  ||||||||| ||||| | ||||||||||||||||    
T  17733 tgagtttagctcagttggtatggacaatgcataatacatgcaaggtccgggtt 17785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 22912 - 22960
Alignment:
Q  50 tgagcttagctcagttgaaatggacaatacataaaatatgcaaggtccg 98  Q
    ||||||||| | |||||| ||| ||||| ||||||||||||||||||||    
T  22912 tgagcttagtttagttgatatgaacaatgcataaaatatgcaaggtccg 22960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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