View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19871_high_4 (Length: 255)
Name: NF19871_high_4
Description: NF19871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19871_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 5214342 - 5214583
Alignment:
| Q |
1 |
aataatttccaacgggctataattgtttttggtacttggcatgttggagctagatgttgattggcattttctcatcaatgaggtgtcaaaatctatgatt |
100 |
Q |
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| T |
5214342 |
aataattttcaacgggctataattgtttttggtacttggcatgttggagctagatgttgattggcattttcttatcaatgaggtgtcaaaatctatgatt |
5214441 |
T |
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| Q |
101 |
ggattttacctaaccaataatgtcatttttgtctaacttcaaattgataattagccaaaaaattattcacatggacatgtttcattgctagcatcacagg |
200 |
Q |
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| T |
5214442 |
ggattttacctaaccaataatgtcatttttgtctagcttcaaattgataattagccaaaaaattattcacatggacatgtttcattactagcatcacagg |
5214541 |
T |
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| Q |
201 |
cgataaatatttgcttccccgacctcggtagcgtcctttgat |
242 |
Q |
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|||||| |||||||||||||||||| |||||||||||||||| |
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| T |
5214542 |
cgataattatttgcttccccgaccttggtagcgtcctttgat |
5214583 |
T |
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