View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19873_low_11 (Length: 305)
Name: NF19873_low_11
Description: NF19873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19873_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 8 - 291
Target Start/End: Complemental strand, 34866387 - 34866104
Alignment:
| Q |
8 |
tgctacctacagaagggctaactggaaagctcgagtaaagctttgtagtgtagccggttttgcaagtgcttcaatacttatcgaatacgagattacttat |
107 |
Q |
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| T |
34866387 |
tgctacctacagaagggctaactggaaagctcgagtaaagctttgtagtgtagccggttttgcaagtgcttcaatacttatcgaatacgagattacttat |
34866288 |
T |
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| Q |
108 |
tcctattagaaatatataaagcaataaaaccttgtgctatgcaggagttacattgcttttataaattacctgctggttctacagataaatattgatatat |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34866287 |
tcctattagaaatatataaagcaataaaaccttgtgctatgcaggagttacattgcttttataaattacctgctggttctacagataaatattgatatat |
34866188 |
T |
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| Q |
208 |
agttgaatgtgtctttcctctattcacagtaggggtttagtatcttatacagagttgaccattagtagcggttcatacactcga |
291 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
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| T |
34866187 |
agttgaacgtgtctttcctctattcacagtaggggtttagtatcgtatacagagttgaccattagtagcgggtcatacactcga |
34866104 |
T |
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