View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19873_low_16 (Length: 232)
Name: NF19873_low_16
Description: NF19873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19873_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 1863462 - 1863657
Alignment:
| Q |
19 |
aatatttcgaatcagtagctaggttcgaggagcacatgacttttcatagttgggttaatattaagacttgataagttatcaaaggtttaccaatagtgtt |
118 |
Q |
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| T |
1863462 |
aatatttcgaatcagtagctaggttcgaggagcacatgacttttcatagttgggttaatattaagacttgataagttatcaaaggtttaccaatagtgtt |
1863561 |
T |
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| Q |
119 |
gcgtaattgtgttccttcttttccctcatttccctttcctgaaatctcttacttattctatattctgtttggttcaccctacatgtatgagaaatt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1863562 |
gcgtaattgtgttccttcttttccctcatttccctttcctgaaatctcttacttattctatattctgtttggttcaccctacatgtatgagaaatt |
1863657 |
T |
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