View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19873_low_17 (Length: 222)
Name: NF19873_low_17
Description: NF19873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19873_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 42358469 - 42358664
Alignment:
| Q |
1 |
tgttttggcgaagagaggggcgagggtgattctaccggcgcgtagcatgaaaaatgcggaggaaacaagaggtagaatagtgacggagtgtcctgaagcg |
100 |
Q |
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| T |
42358469 |
tgttttggcgaagagaggggcgagggtgattctaccggcgcgtagcatgaaaaatgcggaggaaacaagaggtagaatagtgacggagtgtcctgaagcg |
42358568 |
T |
|
| Q |
101 |
gagattatagttatggcacttgatctcagttctctcaattctgttacgaacttcgttactcgttttcattccatcggtttccctctcaatctcctc |
196 |
Q |
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| T |
42358569 |
gagattatagttatggcacttgatctcagttctgtcaattctgttacgaacttcgttactcgttttcactccatcggtttccctctaaatctcctc |
42358664 |
T |
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