View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19874_high_20 (Length: 304)
Name: NF19874_high_20
Description: NF19874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19874_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 27798162 - 27797875
Alignment:
| Q |
1 |
agactgaaatcaaaaaattatgaaacatattagaactaatgtagttactagtgatatatagcaagaaaattatctataactaaaaattatattttaggtt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27798162 |
agactgaaatcaaaaaattatgaaacatattagaactaatgtagttactagtgatatatagcaagaaaattatctataactaaaaattatattttaggtt |
27798063 |
T |
|
| Q |
101 |
tgagtaaatggaagattatgatggattcattacaggccttgcttatttcagcataaagtatgaaaaagctgatatgtgagagatctatcaagaaatgata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
27798062 |
tgagtaaatggaagattatgatggattcattacaggacttgcttatttcagcataaagtatgaaaaagttgatatgtgagagatctatcaagaaatgata |
27797963 |
T |
|
| Q |
201 |
taggaaacatatnnnnnnnnttaatagaacttaaattactgaacttgatcaaaggatctatataaatatttagttgcgttttcaattt |
288 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27797962 |
taggaaacatataaaaaaaattaatagaacttaaattactgaacttgatcaaaggatctatataaatatttagttgcgttttcaattt |
27797875 |
T |
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