View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19874_high_29 (Length: 247)

Name: NF19874_high_29
Description: NF19874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19874_high_29
NF19874_high_29
[»] chr3 (42 HSPs)
chr3 (9-233)||(3648248-3648473)
chr3 (25-66)||(10571199-10571240)
chr3 (25-64)||(3086306-3086345)
chr3 (25-63)||(9484654-9484692)
chr3 (25-63)||(12948098-12948136)
chr3 (25-63)||(29455671-29455709)
chr3 (25-63)||(29793341-29793379)
chr3 (25-63)||(34263667-34263705)
chr3 (25-63)||(34555209-34555247)
chr3 (25-63)||(38833928-38833966)
chr3 (25-63)||(42098590-42098628)
chr3 (25-102)||(44057546-44057628)
chr3 (25-63)||(48927765-48927803)
chr3 (25-63)||(49076389-49076427)
chr3 (25-63)||(50035128-50035166)
chr3 (25-63)||(50673735-50673773)
chr3 (25-66)||(23631555-23631596)
chr3 (25-66)||(35135773-35135814)
chr3 (25-66)||(38492216-38492257)
chr3 (25-60)||(16434820-16434855)
chr3 (25-60)||(32961307-32961342)
chr3 (176-227)||(48650334-48650385)
chr3 (25-60)||(52094057-52094092)
chr3 (25-60)||(53055588-53055623)
chr3 (25-63)||(901051-901089)
chr3 (25-63)||(1778419-1778457)
chr3 (25-63)||(2643232-2643270)
chr3 (25-63)||(4945814-4945852)
chr3 (25-63)||(18013433-18013471)
chr3 (25-63)||(26759537-26759575)
chr3 (25-63)||(28958962-28959000)
chr3 (25-63)||(34669666-34669704)
chr3 (25-63)||(34680239-34680277)
chr3 (25-63)||(36179099-36179137)
chr3 (25-63)||(43370349-43370387)
chr3 (25-63)||(49818815-49818853)
chr3 (25-62)||(10228692-10228729)
chr3 (25-66)||(21489973-21490014)
chr3 (25-66)||(21907161-21907202)
chr3 (25-66)||(51062555-51062596)
chr3 (25-66)||(54684631-54684672)
chr3 (26-66)||(34827419-34827459)
[»] chr8 (37 HSPs)
chr8 (25-106)||(42948218-42948294)
chr8 (25-63)||(20671314-20671352)
chr8 (25-63)||(25009202-25009240)
chr8 (25-63)||(25691562-25691600)
chr8 (25-63)||(30464490-30464528)
chr8 (25-63)||(30653418-30653456)
chr8 (25-66)||(7603362-7603403)
chr8 (25-66)||(9615578-9615619)
chr8 (29-66)||(11335395-11335432)
chr8 (25-66)||(13888595-13888636)
chr8 (176-220)||(2072194-2072238)
chr8 (25-69)||(14847374-14847418)
chr8 (25-61)||(23437778-23437814)
chr8 (25-60)||(8058989-8059024)
chr8 (25-60)||(29917893-29917928)
chr8 (25-60)||(44887680-44887715)
chr8 (25-63)||(4327084-4327122)
chr8 (25-63)||(4960209-4960247)
chr8 (25-63)||(8496851-8496889)
chr8 (29-63)||(21132897-21132931)
chr8 (25-63)||(27301920-27301958)
chr8 (25-63)||(37094190-37094228)
chr8 (25-63)||(38842221-38842259)
chr8 (25-63)||(40645667-40645705)
chr8 (25-63)||(43184744-43184782)
chr8 (25-66)||(886124-886165)
chr8 (25-66)||(1580820-1580861)
chr8 (25-66)||(3293156-3293197)
chr8 (25-62)||(7044468-7044505)
chr8 (25-66)||(7431284-7431325)
chr8 (25-66)||(10535953-10535994)
chr8 (25-66)||(25256498-25256539)
chr8 (25-66)||(38845772-38845813)
chr8 (25-62)||(43049234-43049271)
chr8 (31-63)||(761608-761640)
chr8 (176-220)||(13177781-13177825)
chr8 (27-63)||(18419056-18419092)
[»] chr4 (40 HSPs)
chr4 (25-66)||(39195545-39195586)
chr4 (25-98)||(14958164-14958242)
chr4 (25-63)||(46608271-46608309)
chr4 (25-63)||(1613185-1613223)
chr4 (25-63)||(31152719-31152757)
chr4 (25-63)||(43047445-43047483)
chr4 (25-63)||(43447223-43447261)
chr4 (25-63)||(47834111-47834149)
chr4 (25-63)||(48380531-48380569)
chr4 (25-63)||(53987747-53987785)
chr4 (26-63)||(29821108-29821145)
chr4 (25-64)||(18881324-18881363)
chr4 (25-60)||(39171019-39171054)
chr4 (25-60)||(42185335-42185370)
chr4 (25-60)||(55631842-55631877)
chr4 (25-63)||(1377561-1377599)
chr4 (25-63)||(3708311-3708349)
chr4 (25-63)||(10384906-10384944)
chr4 (25-63)||(28909807-28909845)
chr4 (25-63)||(28914426-28914464)
chr4 (25-63)||(31657323-31657361)
chr4 (25-63)||(33394135-33394173)
chr4 (25-63)||(37164074-37164112)
chr4 (25-63)||(37667741-37667779)
chr4 (25-63)||(44210207-44210245)
chr4 (178-216)||(46806503-46806541)
chr4 (25-63)||(51306201-51306239)
chr4 (25-66)||(4209524-4209565)
chr4 (25-66)||(4264299-4264340)
chr4 (25-66)||(6494755-6494796)
chr4 (25-66)||(7738874-7738915)
chr4 (25-66)||(10181152-10181193)
chr4 (25-66)||(19525769-19525810)
chr4 (29-66)||(19533992-19534029)
chr4 (25-66)||(35755238-35755279)
chr4 (25-66)||(40250742-40250783)
chr4 (25-66)||(50033185-50033226)
chr4 (26-66)||(3443442-3443482)
chr4 (22-66)||(39194074-39194118)
chr4 (31-63)||(39332803-39332835)
[»] chr1 (34 HSPs)
chr1 (25-100)||(50295908-50295988)
chr1 (25-63)||(45299376-45299414)
chr1 (25-63)||(6017421-6017459)
chr1 (25-63)||(7075302-7075340)
chr1 (25-63)||(10100485-10100523)
chr1 (25-63)||(10124167-10124205)
chr1 (25-63)||(23393290-23393328)
chr1 (25-63)||(26543926-26543964)
chr1 (25-66)||(26345375-26345416)
chr1 (25-66)||(27990770-27990811)
chr1 (185-220)||(3527720-3527755)
chr1 (25-60)||(23337868-23337903)
chr1 (25-60)||(31651873-31651908)
chr1 (25-60)||(44741404-44741439)
chr1 (25-60)||(47912342-47912377)
chr1 (25-60)||(52749342-52749377)
chr1 (25-63)||(2139001-2139039)
chr1 (25-63)||(5606363-5606401)
chr1 (25-102)||(31698597-31698679)
chr1 (25-63)||(31932150-31932188)
chr1 (25-63)||(36035744-36035782)
chr1 (25-63)||(41414261-41414299)
chr1 (25-63)||(41855693-41855731)
chr1 (25-63)||(44240577-44240615)
chr1 (25-63)||(48389124-48389162)
chr1 (25-63)||(49903657-49903695)
chr1 (25-63)||(50014533-50014571)
chr1 (25-66)||(3555259-3555300)
chr1 (25-66)||(27581041-27581082)
chr1 (25-66)||(32495209-32495250)
chr1 (25-66)||(32968168-32968209)
chr1 (25-66)||(38458895-38458936)
chr1 (25-66)||(47222380-47222421)
chr1 (25-66)||(50539425-50539466)
[»] chr5 (39 HSPs)
chr5 (25-98)||(35641787-35641865)
chr5 (25-63)||(1098233-1098271)
chr5 (25-63)||(1781113-1781151)
chr5 (25-63)||(8627193-8627231)
chr5 (25-63)||(13548271-13548309)
chr5 (25-63)||(20022918-20022956)
chr5 (25-63)||(20040383-20040421)
chr5 (25-63)||(28142986-28143024)
chr5 (25-63)||(30211709-30211747)
chr5 (25-63)||(30788263-30788301)
chr5 (25-63)||(41263097-41263135)
chr5 (25-66)||(11853214-11853255)
chr5 (25-66)||(27477706-27477747)
chr5 (25-60)||(9936856-9936891)
chr5 (25-60)||(19344667-19344702)
chr5 (25-60)||(32473990-32474025)
chr5 (25-60)||(39104247-39104282)
chr5 (25-64)||(43067386-43067425)
chr5 (26-60)||(14607526-14607560)
chr5 (25-63)||(14633065-14633103)
chr5 (25-63)||(31191145-31191183)
chr5 (25-63)||(33402559-33402597)
chr5 (25-63)||(34169887-34169925)
chr5 (25-63)||(40080039-40080077)
chr5 (25-63)||(40316876-40316914)
chr5 (25-63)||(41410627-41410665)
chr5 (25-66)||(4924893-4924934)
chr5 (25-66)||(5212977-5213018)
chr5 (33-66)||(25773382-25773415)
chr5 (25-62)||(26802069-26802106)
chr5 (25-62)||(26809619-26809656)
chr5 (25-62)||(26824646-26824683)
chr5 (25-66)||(32002069-32002110)
chr5 (189-226)||(34211264-34211301)
chr5 (27-63)||(1831409-1831445)
chr5 (25-69)||(5984991-5985035)
chr5 (25-65)||(35290451-35290491)
chr5 (28-64)||(38698131-38698167)
chr5 (25-65)||(39036575-39036615)
[»] chr2 (27 HSPs)
chr2 (25-63)||(15177427-15177465)
chr2 (25-63)||(7724578-7724616)
chr2 (25-63)||(8373492-8373530)
chr2 (25-63)||(8896329-8896367)
chr2 (25-63)||(12209047-12209085)
chr2 (25-63)||(38963853-38963891)
chr2 (25-63)||(41436890-41436928)
chr2 (25-63)||(43328768-43328806)
chr2 (25-66)||(5030339-5030380)
chr2 (25-100)||(27667974-27668054)
chr2 (25-69)||(32776172-32776216)
chr2 (185-216)||(2395088-2395119)
chr2 (25-60)||(10333545-10333580)
chr2 (25-64)||(43409450-43409489)
chr2 (25-63)||(2831765-2831803)
chr2 (25-63)||(6075183-6075221)
chr2 (25-63)||(16126049-16126087)
chr2 (25-63)||(37987903-37987941)
chr2 (25-66)||(1110457-1110498)
chr2 (25-66)||(4045288-4045329)
chr2 (25-66)||(7442946-7442987)
chr2 (25-66)||(9877138-9877179)
chr2 (25-66)||(37806837-37806878)
chr2 (25-66)||(38137586-38137627)
chr2 (26-63)||(44022326-44022363)
chr2 (25-58)||(45036426-45036459)
chr2 (28-60)||(18504533-18504565)
[»] chr7 (28 HSPs)
chr7 (25-66)||(7314313-7314354)
chr7 (25-66)||(23348411-23348452)
chr7 (25-117)||(40348572-40348669)
chr7 (25-66)||(42493572-42493613)
chr7 (25-63)||(4033453-4033491)
chr7 (25-63)||(9173304-9173342)
chr7 (25-63)||(16807114-16807152)
chr7 (25-63)||(26651177-26651215)
chr7 (25-63)||(28016173-28016211)
chr7 (25-63)||(30462189-30462227)
chr7 (25-63)||(38069109-38069147)
chr7 (28-63)||(38441871-38441906)
chr7 (25-63)||(5842175-5842213)
chr7 (25-63)||(25273985-25274023)
chr7 (25-63)||(38850760-38850798)
chr7 (25-63)||(40818665-40818703)
chr7 (25-66)||(3680403-3680444)
chr7 (25-66)||(18795195-18795236)
chr7 (25-66)||(19072934-19072975)
chr7 (25-66)||(21392183-21392224)
chr7 (25-66)||(31466413-31466454)
chr7 (26-63)||(32972296-32972333)
chr7 (25-66)||(34478063-34478104)
chr7 (25-62)||(35265789-35265826)
chr7 (25-66)||(38498782-38498823)
chr7 (25-66)||(47713557-47713598)
chr7 (25-66)||(48531487-48531528)
chr7 (25-69)||(23474021-23474065)
[»] chr6 (27 HSPs)
chr6 (25-117)||(16434542-16434639)
chr6 (25-63)||(2397828-2397866)
chr6 (25-63)||(4890098-4890136)
chr6 (25-63)||(17496290-17496328)
chr6 (25-63)||(24798518-24798556)
chr6 (25-63)||(24825223-24825261)
chr6 (25-63)||(30699319-30699357)
chr6 (25-63)||(32541449-32541487)
chr6 (25-66)||(9022895-9022936)
chr6 (25-66)||(12869386-12869427)
chr6 (25-60)||(24693199-24693234)
chr6 (23-66)||(30237330-30237373)
chr6 (25-63)||(995621-995659)
chr6 (25-63)||(2141626-2141664)
chr6 (25-63)||(2656642-2656680)
chr6 (25-63)||(6142479-6142517)
chr6 (25-63)||(16969436-16969474)
chr6 (25-63)||(29514998-29515036)
chr6 (25-63)||(31708951-31708989)
chr6 (25-102)||(33973523-33973605)
chr6 (25-63)||(35117338-35117376)
chr6 (25-66)||(8796214-8796255)
chr6 (25-66)||(16120846-16120887)
chr6 (25-66)||(16696071-16696112)
chr6 (25-66)||(18992068-18992109)
chr6 (25-66)||(19788633-19788674)
chr6 (25-66)||(25435576-25435617)
[»] scaffold0221 (1 HSPs)
scaffold0221 (25-63)||(5434-5472)
[»] scaffold0001 (1 HSPs)
scaffold0001 (25-63)||(184024-184062)
[»] scaffold0687 (1 HSPs)
scaffold0687 (25-66)||(1044-1085)
[»] scaffold0500 (1 HSPs)
scaffold0500 (25-60)||(643-678)
[»] scaffold1248 (1 HSPs)
scaffold1248 (25-63)||(1424-1462)
[»] scaffold0952 (1 HSPs)
scaffold0952 (25-63)||(851-889)
[»] scaffold0281 (1 HSPs)
scaffold0281 (25-63)||(13162-13200)
[»] scaffold0366 (1 HSPs)
scaffold0366 (25-66)||(14224-14265)


Alignment Details
Target: chr3 (Bit Score: 171; Significance: 6e-92; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 9 - 233
Target Start/End: Original strand, 3648248 - 3648473
Alignment:
Q  9 aatatcttatttgatgtttatctttgtatattagtataaaaatatggtcaaagtatgtaaaaaatgcaaattgtcaaacatgtcatctaatatgagacga 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  3648248 aatatcttatttgatgtttatctttgtatattagtataaaaatatggtcaaagtaagtaaaaaatacaaattgttaaacatgtcatctaatatgagacga 3648347  T
Q  109 aaggagtaaaacaattgtctctttaata-nnnnnnnnngtctcaaaataattgaaactttagaatatcacttttatgttagaaattgtgtagttatgact 207  Q
    ||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3648348 aaggagtaaaacaattgtctctttaatatattttttttgtctcaaaataattgaaactttagaatatcacttttatgttagaaattgtgtaattatgact 3648447  T
Q  208 tttatatgtgtttatcttgtcttgta 233  Q
    ||||||||||||| ||||||||||||    
T  3648448 tttatatgtgtttgtcttgtcttgta 3648473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 10571240 - 10571199
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  10571240 tttatctttgtaaattagtataaaaatatggtcaaagtatgt 10571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 3086306 - 3086345
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtat 64  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3086306 tttatctttgtatattagtaaaaaaatatggtcaaagtat 3086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 9484692 - 9484654
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  9484692 tttatctttgtatattagtagaaaaatatggtcaaagta 9484654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 12948136 - 12948098
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  12948136 tttatctttgtatattagtagaaaaatatggtcaaagta 12948098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 29455671 - 29455709
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  29455671 tttatctttgtatattagtagaaaaatatggtcaaagta 29455709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 29793341 - 29793379
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  29793341 tttatctttgtatattagtagaaaaatatggtcaaagta 29793379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 34263667 - 34263705
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  34263667 tttatctttgtatattagtagaaaaatatggtcaaagta 34263705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 34555247 - 34555209
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  34555247 tttatctttgtatattagtagaaaaatatggtcaaagta 34555209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 38833928 - 38833966
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  38833928 tttatctttgtatattagtagaaaaatatggtcaaagta 38833966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 42098590 - 42098628
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  42098590 tttatctttgtatattagtagaaaaatatggtcaaagta 42098628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 44057546 - 44057628
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgtaa-----aaaatgcaaattgtcaaacatgtcatctaatatg 102  Q
    |||||||||||||||||||| ||||| ||| ||||||||||| |     ||| |||| ||| |||||||||||||||||||||    
T  44057546 tttatctttgtatattagtagaaaaacatgatcaaagtatgtcatgtcaaaagtgcacattctcaaacatgtcatctaatatg 44057628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 48927765 - 48927803
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  48927765 tttatctttgtatattagtagaaaaatatggtcaaagta 48927803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 49076389 - 49076427
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  49076389 tttatctttgtatattagtagaaaaatatggtcaaagta 49076427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 50035166 - 50035128
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  50035166 tttatctttgtatattagtataaaaacatggtcaaagta 50035128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 50673773 - 50673735
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  50673773 tttatctttgtatattagtagaaaaatatggtcaaagta 50673735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 23631555 - 23631596
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  23631555 tttatctttgtatattagtagaaaaatacggtcaaagtatgt 23631596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 35135814 - 35135773
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  35135814 tttatctttgtatattagtagaaaaacatggtcaaagtatgt 35135773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 38492216 - 38492257
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  38492216 tttatctttgtaaattagtagaaaaatatggtcaaagtatgt 38492257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 16434820 - 16434855
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  16434820 tttatctttgtatattagtaaaaaaatatggtcaaa 16434855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 32961342 - 32961307
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  32961342 tttatctttgtatattagtagaaaaatatggtcaaa 32961307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 48650334 - 48650385
Alignment:
Q  176 acttttatgttagaaattgtgtagttatgacttttatatgtgtttatcttgt 227  Q
    |||||||| ||| ||||||||||||||| |||||||  ||||||||||||||    
T  48650334 acttttatattaaaaattgtgtagttataacttttacctgtgtttatcttgt 48650385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 52094057 - 52094092
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  52094057 tttatctttgtatattagtagaaaaatatggtcaaa 52094092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 53055588 - 53055623
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  53055588 tttatctttgtatattagtagaaaaatatggtcaaa 53055623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 901051 - 901089
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  901051 tttatctttgtatattagtagaaaaatatgatcaaagta 901089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 1778457 - 1778419
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  1778457 tttatctatgtatattagtagaaaaatatggtcaaagta 1778419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 2643232 - 2643270
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  2643232 tttatatttgtatattagtagaaaaatatggtcaaagta 2643270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 4945814 - 4945852
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  4945814 tttatctatgtatattagtagaaaaatatggtcaaagta 4945852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 18013433 - 18013471
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  18013433 tttatctttgtatattagtagaaaaatatgatcaaagta 18013471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 26759575 - 26759537
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  26759575 tttatctatgtatattagtagaaaaatatggtcaaagta 26759537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 28958962 - 28959000
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  28958962 tttatctttatatattagtagaaaaatatggtcaaagta 28959000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 34669704 - 34669666
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  34669704 tttatctttgtatattagtagaaaaatatgatcaaagta 34669666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 34680277 - 34680239
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  34680277 tttatctatgtatattagtagaaaaatatggtcaaagta 34680239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 36179099 - 36179137
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  36179099 tttatctttgtatattagtagaaaaatatgatcaaagta 36179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 43370387 - 43370349
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  43370387 tttatctttgtatattagtataaaaatacgatcaaagta 43370349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 49818853 - 49818815
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  49818853 tttatctatgtatattagtagaaaaatatggtcaaagta 49818815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 10228692 - 10228729
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagt 62  Q
    |||||||||||||||||||  |||||||||||||||||    
T  10228692 tttatctttgtatattagttgaaaaatatggtcaaagt 10228729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 21490014 - 21489973
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||||||||||||||| || ||||||| |||||||||||||    
T  21490014 tttatctttgtatattaataaaaaaatacggtcaaagtatgt 21489973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 21907161 - 21907202
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  21907161 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 21907202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 51062555 - 51062596
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  51062555 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 51062596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 54684631 - 54684672
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||||||| ||||||| |||||    
T  54684631 tttatctttgtatattagtagaaaaatacggtcaaaatatgt 54684672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 34827419 - 34827459
Alignment:
Q  26 ttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||||||||| |||||||||||| |||||| |||||||||    
T  34827419 ttatctttgtaaattagtataaaagtatggtgaaagtatgt 34827459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 42948294 - 42948218
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgtaaaaaatgcaaattgtcaaacatgtcatctaatatgagac 106  Q
    |||||||||||||||||||| ||||||||||||| |     | ||||||||| ||||||||||| |||||||||||||||||    
T  42948294 tttatctttgtatattagtagaaaaatatggtcaga-----tcaaaaatgcacattgtcaaacaagtcatctaatatgagac 42948218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 20671352 - 20671314
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20671352 tttatctttgtatattagtagaaaaatatggtcaaagta 20671314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 25009240 - 25009202
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  25009240 tttatctttgtatattagtagaaaaatatggtcaaagta 25009202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 25691562 - 25691600
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  25691562 tttatctttgtatattagtagaaaaatatggtcaaagta 25691600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 30464528 - 30464490
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30464528 tttatctttgtatattagtagaaaaatatggtcaaagta 30464490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 30653456 - 30653418
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30653456 tttatctttgtatattagtagaaaaatatggtcaaagta 30653418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 7603403 - 7603362
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  7603403 tttatctttgtatattagtataaaaatacggtcaaaatatgt 7603362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 9615619 - 9615578
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  9615619 tttatctttgtatattagtaaaaaaatacggtcaaagtatgt 9615578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 11335395 - 11335432
Alignment:
Q  29 tctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||| |||||||||||||||||||||    
T  11335395 tctttgtatattagtagaaaaatatggtcaaagtatgt 11335432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 13888595 - 13888636
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  13888595 tttatctttgtatattagtagaaaaatacggtcaaagtatgt 13888636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 2072194 - 2072238
Alignment:
Q  176 acttttatgttagaaattgtgtagttatgacttttatatgtgttt 220  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||    
T  2072194 acttttatattaaaaattgtgtagttataacttttatatgtgttt 2072238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 14847374 - 14847418
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgtaaa 69  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||    
T  14847374 tttatctttgtgaattagtagaaaaatatggtcaaagtatgtaaa 14847418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 23437778 - 23437814
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaag 61  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23437778 tttatctttgtatattagtagaaaaatatggtcaaag 23437814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 8058989 - 8059024
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  8058989 tttatctttgtatattagtaaaaaaatatggtcaaa 8059024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 29917893 - 29917928
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  29917893 tttatctttgtatattagtagaaaaatatggtcaaa 29917928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 44887680 - 44887715
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  44887680 tttatctttgtatattagtagaaaaatatggtcaaa 44887715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 4327084 - 4327122
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  4327084 tttatctttgtatattagtagaaaaatatgatcaaagta 4327122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 4960247 - 4960209
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  4960247 tttatctatgtatattagtagaaaaatatggtcaaagta 4960209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 8496851 - 8496889
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  8496851 tttatctttgtatattcgtagaaaaatatggtcaaagta 8496889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 21132897 - 21132931
Alignment:
Q  29 tctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||| ||||||||||||||||||    
T  21132897 tctttgtatattagtagaaaaatatggtcaaagta 21132931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 27301958 - 27301920
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  27301958 tttatctttgtatattagtagaaaaatattgtcaaagta 27301920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 37094228 - 37094190
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  37094228 tttatctatgtatattagtagaaaaatatggtcaaagta 37094190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 38842259 - 38842221
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  38842259 tttatctttgtatattagtagaaaaatatgatcaaagta 38842221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40645705 - 40645667
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  40645705 tttatctttgtatattagtagaaaaatatgatcaaagta 40645667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 43184744 - 43184782
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  43184744 tttatttttgtatattagtagaaaaatatggtcaaagta 43184782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 886165 - 886124
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  886165 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 886124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 1580861 - 1580820
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| ||||||| |||| ||||||||||||||||    
T  1580861 tttatctttgtaaattagtagaaaagtatggtcaaagtatgt 1580820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 3293197 - 3293156
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  3293197 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 3293156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 7044468 - 7044505
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagt 62  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  7044468 tttatctttatatattagtaaaaaaatatggtcaaagt 7044505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 7431284 - 7431325
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| |||||| |||||||| |||||    
T  7431284 tttatctttgtatattagtagaaaaatgtggtcaaaatatgt 7431325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 10535994 - 10535953
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||||||||||||||||||||||||||  || |||||||||    
T  10535994 tttatctttgtatattagtataaaaatacagttaaagtatgt 10535953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 25256498 - 25256539
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| ||||||| ||||||||| |||||||||||    
T  25256498 tttatctttgtaaattagtagaaaaatatgatcaaagtatgt 25256539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 38845772 - 38845813
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||||| ||||||||||||||    
T  38845772 tttatctttgtgaattagtataaaaatgtggtcaaagtatgt 38845813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 43049234 - 43049271
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagt 62  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  43049234 tttatctatgtatattagtagaaaaatatggtcaaagt 43049271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 761640 - 761608
Alignment:
Q  31 tttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||| ||||||||||||||||||    
T  761640 tttgtatattagtagaaaaatatggtcaaagta 761608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 13177781 - 13177825
Alignment:
Q  176 acttttatgttagaaattgtgtagttatgacttttatatgtgttt 220  Q
    |||||||| || |||||| ||||||||||||||||| ||||||||    
T  13177781 acttttatattggaaattatgtagttatgacttttacatgtgttt 13177825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 18419092 - 18419056
Alignment:
Q  27 tatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  18419092 tatctatgtatattagtagaaaaatatggtcaaagta 18419056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 39195586 - 39195545
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39195586 tttatctttgtatattagtataaaaatatggtcaaagtatgt 39195545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 14958164 - 14958242
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtat-----gtaaaaaatgcaaattgtcaaacatgtcatctaa 98  Q
    ||||| |||||||||||||| |||||||||||||||||||      | ||||||||| |||||||||||||||||||||    
T  14958164 tttatttttgtatattagtagaaaaatatggtcaaagtatatcggatcaaaaatgcacattgtcaaacatgtcatctaa 14958242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 46608309 - 46608271
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46608309 tttatctttgtatattagtataaaaatatggtcaaagta 46608271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 1613185 - 1613223
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  1613185 tttatctttgtatattagtagaaaaatatggtcaaagta 1613223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 31152757 - 31152719
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31152757 tttatctttgtatattagtagaaaaatatggtcaaagta 31152719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 43047483 - 43047445
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  43047483 tttatctttgtatattagtagaaaaatatggtcaaagta 43047445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 43447261 - 43447223
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  43447261 tttatctttgtatattagtagaaaaatatggtcaaagta 43447223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 47834111 - 47834149
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  47834111 tttatctttgtatattagtagaaaaatatggtcaaagta 47834149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 48380569 - 48380531
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  48380569 tttatctttgtatattagtagaaaaatatggtcaaagta 48380531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 53987747 - 53987785
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  53987747 tttatctttgtatattagtagaaaaatatggtcaaagta 53987785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 29821145 - 29821108
Alignment:
Q  26 ttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  29821145 ttatctttgtatattagtagaaaaatatggtcaaagta 29821108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 18881324 - 18881363
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtat 64  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  18881324 tttatctttgtatattagtagaaaaatatagtcaaagtat 18881363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 39171054 - 39171019
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  39171054 tttatctttgtatattagtagaaaaatatggtcaaa 39171019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 42185370 - 42185335
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  42185370 tttatctttgtatattagtagaaaaatatggtcaaa 42185335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 55631842 - 55631877
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  55631842 tttatctttgtatattagtaaaaaaatatggtcaaa 55631877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 1377599 - 1377561
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  1377599 tttatctatgtatattagtagaaaaatatggtcaaagta 1377561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 3708349 - 3708311
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  3708349 tttatctttgtatattagtagaaaaatatgatcaaagta 3708311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 10384944 - 10384906
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  10384944 tttatctttgtatattagtagaaaaatatggttaaagta 10384906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 28909807 - 28909845
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  28909807 tttatctttgtattttagtagaaaaatatggtcaaagta 28909845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 28914464 - 28914426
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  28914464 tttatctttatatattagtagaaaaatatggtcaaagta 28914426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 31657323 - 31657361
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  31657323 tttatctatgtatattagtagaaaaatatggtcaaagta 31657361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 33394173 - 33394135
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  33394173 tttatcttcgtatattagtagaaaaatatggtcaaagta 33394135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 37164112 - 37164074
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  37164112 tttatctttgtatattagtagaaaaatatagtcaaagta 37164074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 37667741 - 37667779
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  37667741 tttatctttgtatattaatagaaaaatatggtcaaagta 37667779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 44210245 - 44210207
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  44210245 tttatctatgtatattagtagaaaaatatggtcaaagta 44210207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 46806503 - 46806541
Alignment:
Q  178 ttttatgttagaaattgtgtagttatgacttttatatgt 216  Q
    |||||| || |||||||||||||||||||||||||||||    
T  46806503 ttttatatttgaaattgtgtagttatgacttttatatgt 46806541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 51306201 - 51306239
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  51306201 tttatctatgtatattagtagaaaaatatggtcaaagta 51306239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 4209524 - 4209565
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  4209524 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 4209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 4264299 - 4264340
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  4264299 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 4264340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 6494755 - 6494796
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  6494755 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 6494796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 7738915 - 7738874
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| ||||||| |||| ||||||||||||||||    
T  7738915 tttatctttgtaaattagtagaaaagtatggtcaaagtatgt 7738874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 10181152 - 10181193
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| |||||| |||||||| |||||    
T  10181152 tttatctttgtatattagtagaaaaatgtggtcaaaatatgt 10181193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 19525810 - 19525769
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  19525810 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 19525769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 19533992 - 19534029
Alignment:
Q  29 tctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  19533992 tctttgtatattagtagaaaaatattgtcaaagtatgt 19534029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 35755279 - 35755238
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||||||| |||||||||||||||||||| ||||| |||||    
T  35755279 tttatctttatatattagtataaaaatatgatcaaaatatgt 35755238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 40250742 - 40250783
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||| |||||||||||||||||||||| ||||||| |||||    
T  40250742 tttatatttgtatattagtataaaaataaggtcaaactatgt 40250783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 50033185 - 50033226
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  50033185 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 50033226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 3443482 - 3443442
Alignment:
Q  26 ttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||||||||| ||||||| |||| ||||||||||||||||    
T  3443482 ttatctttgtaaattagtagaaaagtatggtcaaagtatgt 3443442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 39194074 - 39194118
Alignment:
Q  22 atgtttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||| |||||||| |||||||  ||||||||||||    
T  39194074 atgtttatctttgtgtattagtagaaaaatacagtcaaagtatgt 39194118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 39332803 - 39332835
Alignment:
Q  31 tttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||| ||||||||||||||||||    
T  39332803 tttgtatattagtagaaaaatatggtcaaagta 39332835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 50295908 - 50295988
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtat-----gtaaaaaatgcaaattgtcaaacatgtcatctaata 100  Q
    |||||||||||||||||| | |||||||||| ||||||||     || ||||||||||||||||||||||||| |||||||    
T  50295908 tttatctttgtatattagcagaaaaatatgggcaaagtatgtcaggtcaaaaatgcaaattgtcaaacatgtcttctaata 50295988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 45299414 - 45299376
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45299414 tttatctttgtatattagtataaaaatatggtcaaagta 45299376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 6017421 - 6017459
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  6017421 tttatctttgtatattagtagaaaaatatggtcaaagta 6017459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 7075302 - 7075340
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  7075302 tttatctttgtatattagtagaaaaatatggtcaaagta 7075340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 10100485 - 10100523
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  10100485 tttatctttgtatattagtagaaaaatatggtcaaagta 10100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 10124205 - 10124167
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  10124205 tttatctttgtatattagtagaaaaatatggtcaaagta 10124167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 23393328 - 23393290
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  23393328 tttatatttgtatattagtataaaaatatggtcaaagta 23393290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 26543964 - 26543926
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  26543964 tttatctttgtatattagtagaaaaatatggtcaaagta 26543926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 26345375 - 26345416
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  26345375 tttatctttgtatattagtagaaatatatggtcaaagtatgt 26345416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 27990811 - 27990770
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  27990811 tttatttttgtatattagtagaaaaatatggtcaaagtatgt 27990770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 3527720 - 3527755
Alignment:
Q  185 ttagaaattgtgtagttatgacttttatatgtgttt 220  Q
    |||||||||||||||||||||||||||||| |||||    
T  3527720 ttagaaattgtgtagttatgacttttatatatgttt 3527755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 23337903 - 23337868
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  23337903 tttatctttgtatattagtagaaaaatatggtcaaa 23337868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 31651873 - 31651908
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  31651873 tttatctttgtatattagtagaaaaatatggtcaaa 31651908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 44741439 - 44741404
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  44741439 tttatctttgtatattagtagaaaaatatggtcaaa 44741404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 47912377 - 47912342
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  47912377 tttatctttgtatattagtagaaaaatatggtcaaa 47912342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 52749377 - 52749342
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  52749377 tttatctttgtatattagtagaaaaatatggtcaaa 52749342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 2139001 - 2139039
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  2139001 tttatctttgtatattagtagaaaaatatgatcaaagta 2139039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 5606363 - 5606401
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  5606363 tttatctttgtatattagtagaaaaatatggttaaagta 5606401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 31698679 - 31698597
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatg-----taaaaaatgcaaattgtcaaacatgtcatctaatatg 102  Q
    ||||||||||||||||| || ||||||||| ||||||||||     | ||||||| |  ||||||||||| ||||||||||||    
T  31698679 tttatctttgtatattaataaaaaaatatgatcaaagtatgtcaaattaaaaatgtactttgtcaaacatatcatctaatatg 31698597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 31932150 - 31932188
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  31932150 tttatatttgtatattagtagaaaaatatggtcaaagta 31932188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 36035782 - 36035744
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  36035782 tttatctttgtatattagtagaaaaatatgatcaaagta 36035744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 41414299 - 41414261
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  41414299 tttatctatgtatattagtagaaaaatatggtcaaagta 41414261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 41855693 - 41855731
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  41855693 tttatctatgtatattagtagaaaaatatggtcaaagta 41855731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 44240615 - 44240577
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  44240615 tttatctatgtatattagtagaaaaatatggtcaaagta 44240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 48389162 - 48389124
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  48389162 tttatctatgtatattagtagaaaaatatggtcaaagta 48389124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 49903657 - 49903695
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  49903657 tttatctttgtatattagtagaaaaatatgatcaaagta 49903695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 50014533 - 50014571
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  50014533 tttatctatgtatattagtagaaaaatatggtcaaagta 50014571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 3555300 - 3555259
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||||||||  |||||||||||    
T  3555300 tttatctttgtatattagtagaaaaatatattcaaagtatgt 3555259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 27581041 - 27581082
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||||||||||||||| || ||||||||| |||||||||||    
T  27581041 tttatctttgtatattattagaaaaatatgatcaaagtatgt 27581082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 32495209 - 32495250
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  32495209 tttatctttgtatattagtcgaaaaatatggtcaaaatatgt 32495250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 32968209 - 32968168
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||||||||||||||||||||||||||  |||||| |||||    
T  32968209 tttatctttgtatattagtataaaaatacagtcaaaatatgt 32968168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 38458895 - 38458936
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  38458895 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 38458936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 47222380 - 47222421
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  47222380 tttatctttgtgaattagtaaaaaaatatggtcaaagtatgt 47222421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 50539425 - 50539466
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  50539425 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 50539466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 35641865 - 35641787
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatg-----taaaaaatgcaaattgtcaaacatgtcatctaa 98  Q
    ||||||||| |||||||||| ||||||||||||||||||||     | ||||||||| |||||||||||| ||||||||    
T  35641865 tttatctttatatattagtagaaaaatatggtcaaagtatgtcagatcaaaaatgcacattgtcaaacatatcatctaa 35641787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 1098271 - 1098233
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  1098271 tttatctttgtatattagtagaaaaatatggtcaaagta 1098233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 1781113 - 1781151
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  1781113 tttatctttgtatattagtagaaaaatatggtcaaagta 1781151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 8627231 - 8627193
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  8627231 tttatctttgtatattagtaaaaaaatatggtcaaagta 8627193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 13548309 - 13548271
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  13548309 tttatctttgtatattagtagaaaaatatggtcaaagta 13548271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 20022956 - 20022918
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20022956 tttatctttgtatattagtagaaaaatatggtcaaagta 20022918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 20040383 - 20040421
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20040383 tttatctttgtatattagtagaaaaatatggtcaaagta 20040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 28143024 - 28142986
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  28143024 tttatctttgtatattagtagaaaaatatggtcaaagta 28142986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 30211709 - 30211747
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30211709 tttatctttgtatattagtagaaaaatatggtcaaagta 30211747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 30788301 - 30788263
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30788301 tttatctttgtatattagtagaaaaatatggtcaaagta 30788263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 41263097 - 41263135
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  41263097 tttatctttgtatattagtagaaaaatatggtcaaagta 41263135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 11853255 - 11853214
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  11853255 tttatctctgtatattagtataaaaatattgtcaaagtatgt 11853214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 27477706 - 27477747
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  27477706 tttatctttgtatattagtaaaaaaatacggtcaaagtatgt 27477747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 9936856 - 9936891
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  9936856 tttatctttgtatattagtagaaaaatatggtcaaa 9936891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 19344667 - 19344702
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  19344667 tttatctttgtatattagtagaaaaatatggtcaaa 19344702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 32473990 - 32474025
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  32473990 tttatctttgtatattagtagaaaaatatggtcaaa 32474025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 39104247 - 39104282
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  39104247 tttatctttgtatattagtagaaaaatatggtcaaa 39104282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 43067386 - 43067425
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtat 64  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  43067386 tttatctttgtaaattagtagaaaaatatggtcaaagtat 43067425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 14607526 - 14607560
Alignment:
Q  26 ttatctttgtatattagtataaaaatatggtcaaa 60  Q
    ||||||||||||||||||| |||||||||||||||    
T  14607526 ttatctttgtatattagtagaaaaatatggtcaaa 14607560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 14633103 - 14633065
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  14633103 tttatctttgtatatttgtagaaaaatatggtcaaagta 14633065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 31191145 - 31191183
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  31191145 tttatctttgtatattaatagaaaaatatggtcaaagta 31191183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 33402559 - 33402597
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  33402559 tttatctttgtatattagtagaaaaatatgatcaaagta 33402597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 34169925 - 34169887
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  34169925 tttatctatgtatattagtagaaaaatatggtcaaagta 34169887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40080077 - 40080039
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  40080077 tttatctatgtatattagtagaaaaatatggtcaaagta 40080039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40316914 - 40316876
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  40316914 tttatctttgtatattagtagaaaaatatggtcgaagta 40316876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 41410627 - 41410665
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  41410627 tttatctttgtatattagtagaaaaatatggtcgaagta 41410665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 4924934 - 4924893
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  4924934 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 4924893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 5213018 - 5212977
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| ||||||| |||| ||||||||||||||||    
T  5213018 tttatctttgtaaattagtagaaaagtatggtcaaagtatgt 5212977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 25773382 - 25773415
Alignment:
Q  33 tgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| |||||||||||||||||||||    
T  25773382 tgtatattagtagaaaaatatggtcaaagtatgt 25773415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 26802069 - 26802106
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagt 62  Q
    |||||||||||||||||||  |||||||||||||||||    
T  26802069 tttatctttgtatattagttgaaaaatatggtcaaagt 26802106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 26809619 - 26809656
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagt 62  Q
    |||||||||||||||||||  |||||||||||||||||    
T  26809619 tttatctttgtatattagttgaaaaatatggtcaaagt 26809656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 26824646 - 26824683
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagt 62  Q
    |||||||||||||||||||  |||||||||||||||||    
T  26824646 tttatctttgtatattagttgaaaaatatggtcaaagt 26824683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 32002110 - 32002069
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  32002110 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 32002069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 34211264 - 34211301
Alignment:
Q  189 aaattgtgtagttatgacttttatatgtgtttatcttg 226  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  34211264 aaattgtgtagttatgacttttatatgtatttaacttg 34211301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 1831445 - 1831409
Alignment:
Q  27 tatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||| |||||||||||| |||||    
T  1831445 tatctttgtatattagtagaaaaatatggtcgaagta 1831409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 5985035 - 5984991
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgtaaa 69  Q
    |||||||||||||||||||| ||||||| ||||||| | ||||||    
T  5985035 tttatctttgtatattagtagaaaaatacggtcaaaatttgtaaa 5984991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 35290451 - 35290491
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatg 65  Q
    |||||||||||  ||||||| ||||||||||||||||||||    
T  35290451 tttatctttgtgaattagtagaaaaatatggtcaaagtatg 35290491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 38698131 - 38698167
Alignment:
Q  28 atctttgtatattagtataaaaatatggtcaaagtat 64  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  38698131 atctttgtaaattagtaaaaaaatatggtcaaagtat 38698167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 39036575 - 39036615
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatg 65  Q
    |||||||||||  ||||||| ||||||||||||||||||||    
T  39036575 tttatctttgtgaattagtagaaaaatatggtcaaagtatg 39036615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 15177465 - 15177427
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15177465 tttatctttgtatattagtataaaaatatggtcaaagta 15177427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 7724578 - 7724616
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  7724578 tttatctttgtatattagtagaaaaatatggtcaaagta 7724616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 8373530 - 8373492
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  8373530 tttatctttgtatattagtagaaaaatatggtcaaagta 8373492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 8896367 - 8896329
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  8896367 tttatctttgtatattagtagaaaaatatggtcaaagta 8896329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 12209085 - 12209047
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  12209085 tttatctttgtatattagtagaaaaatatggtcaaagta 12209047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 38963891 - 38963853
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  38963891 tttatctttgtatattagtagaaaaatatggtcaaagta 38963853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 41436928 - 41436890
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  41436928 tttatctttgtatattagtagaaaaatatggtcaaagta 41436890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 43328768 - 43328806
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  43328768 tttatctttgtatattagtagaaaaatatggtcaaagta 43328806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 5030380 - 5030339
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  5030380 tttatctttgtatattagtataaaaatacgatcaaagtatgt 5030339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 27668054 - 27667974
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtat-----gtaaaaaatgcaaattgtcaaacatgtcatctaata 100  Q
    |||||||||| |||||| || |||||||||||||||||||     || |||| | |||||||||||||| |||||||||||    
T  27668054 tttatctttgcatattactagaaaaatatggtcaaagtatgtcaagtcaaaattacaaattgtcaaacaagtcatctaata 27667974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 32776172 - 32776216
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgtaaa 69  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||    
T  32776172 tttatctttgtatattagtagaaaaatatggctaaagtatgtaaa 32776216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 216
Target Start/End: Complemental strand, 2395119 - 2395088
Alignment:
Q  185 ttagaaattgtgtagttatgacttttatatgt 216  Q
    ||||||||||||||||||||||||||||||||    
T  2395119 ttagaaattgtgtagttatgacttttatatgt 2395088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 10333545 - 10333580
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  10333545 tttatctttgtatattagtagaaaaatatggtcaaa 10333580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 43409450 - 43409489
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtat 64  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  43409450 tttatctttgtatattaatagaaaaatatggtcaaagtat 43409489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 2831803 - 2831765
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  2831803 tttatatttgtatattagtagaaaaatatggtcaaagta 2831765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 6075221 - 6075183
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  6075221 tttatctttgtatattaatagaaaaatatggtcaaagta 6075183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 16126049 - 16126087
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  16126049 tttatctttgtatattagtggaaaaatatggtcaaagta 16126087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 37987903 - 37987941
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  37987903 tttatctttgtatattagtaaaaaaatatgatcaaagta 37987941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 1110457 - 1110498
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  1110457 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 1110498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 4045329 - 4045288
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| |||||||||||||| |||||||| |||||    
T  4045329 tttatctttgtaaattagtataaaaatgtggtcaaaatatgt 4045288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 7442987 - 7442946
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| ||||||| |||| ||||||||||||||||    
T  7442987 tttatctttgtaaattagtagaaaagtatggtcaaagtatgt 7442946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 9877179 - 9877138
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  9877179 tttatctttgtgaattagtaaaaaaatatggtcaaagtatgt 9877138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 37806878 - 37806837
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||||||||||| ||| |||||    
T  37806878 tttatctttgtatattagtagaaaaatatggttaaaatatgt 37806837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 38137627 - 38137586
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  38137627 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 38137586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 44022363 - 44022326
Alignment:
Q  26 ttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  44022363 ttatctttgtatattagtagaaaaatatagtcaaagta 44022326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 45036459 - 45036426
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtca 58  Q
    |||||||||||||||||||| |||||||||||||    
T  45036459 tttatctttgtatattagtagaaaaatatggtca 45036426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 18504565 - 18504533
Alignment:
Q  28 atctttgtatattagtataaaaatatggtcaaa 60  Q
    ||||||||||||||||| |||||||||||||||    
T  18504565 atctttgtatattagtagaaaaatatggtcaaa 18504533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 7314313 - 7314354
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  7314313 tttatctttgtatattagtagaaaaatatggtcaaagtatgt 7314354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 23348452 - 23348411
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  23348452 tttatctttgtatattagtaaaaaaatatggtcaaagtatgt 23348411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 40348572 - 40348669
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtat-----gtaaaaaatgcaaattgtcaaacatgtcatctaatatgagacgaaaggagtaa 117  Q
    |||||||||||||||||||| ||||||||||||||| |||     || |||| |||||||||| ||||| ||||||||||| | |||  |||||||||    
T  40348572 tttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaaaagtgcaaattgttaaacaggtcatctaataagggactgaaggagtaa 40348669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 42493613 - 42493572
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  42493613 tttatctttgtatattagtagaaaaatatggtcaaagtatgt 42493572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 4033453 - 4033491
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  4033453 tttatctttgtatattagtataaaaatacggtcaaagta 4033491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 9173304 - 9173342
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  9173304 tttatctttgtatattagtagaaaaatatggtcaaagta 9173342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 16807114 - 16807152
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  16807114 tttatctttgtatattagtagaaaaatatggtcaaagta 16807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 26651177 - 26651215
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  26651177 tttatctttgtatattagtagaaaaatatggtcaaagta 26651215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 28016211 - 28016173
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  28016211 tttatctttgtatattagtagaaaaatatggtcaaagta 28016173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 30462189 - 30462227
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30462189 tttatctttgtatattagtaaaaaaatatggtcaaagta 30462227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 38069147 - 38069109
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  38069147 tttatctttgtatattagtagaaaaatatggtcaaagta 38069109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 38441906 - 38441871
Alignment:
Q  28 atctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||||||||||||| ||||||||||||||||||    
T  38441906 atctttgtatattagtagaaaaatatggtcaaagta 38441871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 5842213 - 5842175
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  5842213 tttatctttatatattagtataaaaatatgatcaaagta 5842175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 25273985 - 25274023
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  25273985 tttatctttgtatattagtagaaaattatggtcaaagta 25274023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 38850798 - 38850760
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  38850798 tttatctttgtatattagtggaaaaatatggtcaaagta 38850760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 40818665 - 40818703
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  40818665 tttatctttgtatattagtagaaaaatatggtcagagta 40818703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 3680444 - 3680403
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||| |||||||||||||||||||||| ||||||| |||||    
T  3680444 tttatatttgtatattagtataaaaataaggtcaaaatatgt 3680403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 18795236 - 18795195
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  18795236 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 18795195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 19072934 - 19072975
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  19072934 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 19072975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 21392183 - 21392224
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  21392183 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 21392224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 31466454 - 31466413
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| ||||||| |||| ||||||||||||||||    
T  31466454 tttatctttgtaaattagtagaaaagtatggtcaaagtatgt 31466413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 32972296 - 32972333
Alignment:
Q  26 ttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  32972296 ttatctatgtatattagtagaaaaatatggtcaaagta 32972333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 34478104 - 34478063
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  34478104 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 34478063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 35265789 - 35265826
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagt 62  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  35265789 tttatctttgtatattagtagaaaaatatagtcaaagt 35265826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 38498782 - 38498823
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||| |||||||||||||| ||||||||||||||| |||||    
T  38498782 tttatttttgtatattagtagaaaaatatggtcaaaatatgt 38498823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 47713598 - 47713557
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  47713598 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 47713557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 48531487 - 48531528
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  48531487 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 48531528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 23474065 - 23474021
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgtaaa 69  Q
    |||||||||||| |||||||  ||| |||||||||||||||||||    
T  23474065 tttatctttgtaaattagtaggaaagtatggtcaaagtatgtaaa 23474021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 16434639 - 16434542
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatg-----taaaaaatgcaaattgtcaaacatgtcatctaatatgagacgaaaggagtaa 117  Q
    |||||||||||||||||||  ||||||||||||||||||||     | |||| ||||||||| ||||||  |||||||||||| |||| | |||||||    
T  16434639 tttatctttgtatattagtggaaaaatatggtcaaagtatgtcagatcaaaagtgcaaattgccaaacaaatcatctaatatgggacggagggagtaa 16434542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 2397866 - 2397828
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  2397866 tttatctttgtatattagtagaaaaatatggtcaaagta 2397828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 4890098 - 4890136
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  4890098 tttatctttgtatattagtagaaaaatatggtcaaagta 4890136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 17496290 - 17496328
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  17496290 tttatctttgtatattagtagaaaaatatggtcaaagta 17496328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 24798518 - 24798556
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  24798518 tttatctttgtatattagtagaaaaatatggtcaaagta 24798556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 24825261 - 24825223
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  24825261 tttatctttgtatattagtagaaaaatatggtcaaagta 24825223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 30699357 - 30699319
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30699357 tttatctttgtatattagtagaaaaatatggtcaaagta 30699319  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 32541449 - 32541487
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  32541449 tttatctttgtatattagtagaaaaatatggtcaaagta 32541487  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 9022936 - 9022895
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  9022936 tttatttttgtatattagtagaaaaatatggtcaaagtatgt 9022895  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 12869386 - 12869427
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  12869386 tttatctttgtatattagtagaaaaatatggtcaaactatgt 12869427  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 24693234 - 24693199
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  24693234 tttatctttgtatattagtagaaaaatatggtcaaa 24693199  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 30237330 - 30237373
Alignment:
Q  23 tgtttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||  ||||||| |||||||||||||||||||||    
T  30237330 tgtttatctttgtgaattagtagaaaaatatggtcaaagtatgt 30237373  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 995659 - 995621
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  995659 tttatctttgtatattagtagaaaaatatagtcaaagta 995621  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 2141664 - 2141626
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  2141664 tttatctttgtatattagtagaaaaatatgatcaaagta 2141626  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 2656642 - 2656680
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  2656642 tttatctttgtatattagtagaaaaatatagtcaaagta 2656680  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 6142479 - 6142517
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  6142479 tttatctttgtatattagtagaaaaatatgatcaaagta 6142517  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 16969474 - 16969436
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  16969474 tttatatttgtatattagtagaaaaatatggtcaaagta 16969436  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 29514998 - 29515036
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  29514998 tttatctttgtatattagtagaaaaatatgatcaaagta 29515036  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 31708989 - 31708951
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  31708989 tttatctttgtatattagtagaaaaatacggtcaaagta 31708951  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 33973605 - 33973523
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatg-----taaaaaatgcaaattgtcaaacatgtcatctaatatg 102  Q
    |||||||||||||||||||| ||||||||||||| | ||||     | |||| |||| ||||||||| || ||||||||||||    
T  33973605 tttatctttgtatattagtaaaaaaatatggtcataatatgtcagatcaaaagtgcacattgtcaaatatatcatctaatatg 33973523  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 35117376 - 35117338
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  35117376 tttatctttgtatattagtggaaaaatatggtcaaagta 35117338  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 8796214 - 8796255
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  8796214 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 8796255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 16120846 - 16120887
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||| ||||||| ||||||| |||||    
T  16120846 tttatctttgtatattagtaaaaaaatacggtcaaaatatgt 16120887  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 16696112 - 16696071
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  16696112 tttatctttgtgaattagtagaaaaatatggtcaaagtatgt 16696071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 18992068 - 18992109
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| ||||||| |||| ||||||||||||||||    
T  18992068 tttatctttgtaaattagtagaaaagtatggtcaaagtatgt 18992109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 19788674 - 19788633
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  19788674 tttatatttgtatattagtagaaaaatatggttaaagtatgt 19788633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 25435576 - 25435617
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  25435576 tttatctttgtgaattagtataaaagtatggtcaaagtatgt 25435617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 5472 - 5434
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  5472 tttatctttgtatattagtagaaaaatatggtcaaagta 5434  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 184062 - 184024
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  184062 tttatctttgtatattagtagaaaaatatggtcaaagta 184024  T

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Target: scaffold0687 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 1085 - 1044
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  1085 tttatctttgtatattagtataaaaatacggtcaaaatatgt 1044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 643 - 678
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaa 60  Q
    |||||||||||||||||||| |||||||||||||||    
T  643 tttatctttgtatattagtagaaaaatatggtcaaa 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 1424 - 1462
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  1424 tttatttttgtatattagtagaaaaatatggtcaaagta 1462  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 889 - 851
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  889 tttatttttgtatattagtagaaaaatatggtcaaagta 851  T

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Target: scaffold0281 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 13200 - 13162
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagta 63  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  13200 tttatctatgtatattagtagaaaaatatggtcaaagta 13162  T

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Target: scaffold0366 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 14224 - 14265
Alignment:
Q  25 tttatctttgtatattagtataaaaatatggtcaaagtatgt 66  Q
    |||||||||||| ||||||| |||| ||||||||||||||||    
T  14224 tttatctttgtaaattagtagaaaagtatggtcaaagtatgt 14265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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