View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19874_high_41 (Length: 232)

Name: NF19874_high_41
Description: NF19874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19874_high_41
NF19874_high_41
[»] chr1 (39 HSPs)
chr1 (85-220)||(32370385-32370520)
chr1 (1-86)||(40239998-40240083)
chr1 (4-84)||(51666862-51666942)
chr1 (1-81)||(37947112-37947192)
chr1 (4-87)||(12972592-12972675)
chr1 (1-79)||(37435467-37435546)
chr1 (1-87)||(8577388-8577474)
chr1 (4-85)||(29638817-29638898)
chr1 (2-87)||(40118601-40118686)
chr1 (4-83)||(4490615-4490694)
chr1 (1-84)||(26760661-26760744)
chr1 (1-88)||(31244620-31244707)
chr1 (4-88)||(41564765-41564849)
chr1 (4-83)||(50460601-50460681)
chr1 (8-79)||(22674803-22674874)
chr1 (4-86)||(29094635-29094717)
chr1 (4-86)||(48962088-48962170)
chr1 (1-62)||(4618743-4618804)
chr1 (4-85)||(12990373-12990454)
chr1 (1-81)||(43105204-43105284)
chr1 (4-88)||(46903572-46903656)
chr1 (45-85)||(48257015-48257055)
chr1 (8-87)||(40053012-40053091)
chr1 (4-86)||(5574162-5574244)
chr1 (4-86)||(23399876-23399958)
chr1 (4-70)||(30414966-30415032)
chr1 (1-86)||(48028625-48028709)
chr1 (3-79)||(28457241-28457317)
chr1 (4-87)||(27954330-27954413)
chr1 (8-55)||(33111831-33111878)
chr1 (4-87)||(43757688-43757771)
chr1 (11-85)||(835980-836054)
chr1 (46-87)||(11897318-11897359)
chr1 (51-88)||(35030659-35030696)
chr1 (9-81)||(11121587-11121659)
chr1 (1-37)||(16252709-16252745)
chr1 (7-79)||(30596819-30596891)
chr1 (1-37)||(35030698-35030734)
chr1 (1-81)||(48336347-48336427)
[»] chr8 (37 HSPs)
chr8 (1-87)||(37471742-37471828)
chr8 (1-88)||(22836024-22836111)
chr8 (1-88)||(41776274-41776361)
chr8 (1-88)||(21649055-21649142)
chr8 (1-87)||(22203101-22203187)
chr8 (3-86)||(23265240-23265323)
chr8 (1-70)||(6243133-6243202)
chr8 (1-86)||(33692820-33692905)
chr8 (1-86)||(43590793-43590878)
chr8 (1-88)||(1646355-1646442)
chr8 (1-86)||(10591760-10591845)
chr8 (4-88)||(23709078-23709162)
chr8 (4-86)||(32777985-32778066)
chr8 (1-82)||(1422593-1422674)
chr8 (1-86)||(8233383-8233468)
chr8 (4-86)||(18550081-18550163)
chr8 (4-86)||(25430748-25430830)
chr8 (4-85)||(34247876-34247957)
chr8 (4-88)||(42651022-42651106)
chr8 (2-84)||(39386810-39386892)
chr8 (4-85)||(13924111-13924192)
chr8 (4-88)||(9227371-9227455)
chr8 (1-85)||(14233532-14233616)
chr8 (4-79)||(27300448-27300523)
chr8 (4-79)||(34838164-34838239)
chr8 (4-88)||(28713195-28713279)
chr8 (4-88)||(28720542-28720626)
chr8 (4-88)||(28728184-28728268)
chr8 (4-84)||(34578226-34578306)
chr8 (43-87)||(40570649-40570693)
chr8 (4-88)||(45405720-45405804)
chr8 (4-86)||(4148542-4148624)
chr8 (1-87)||(5742543-5742629)
chr8 (1-55)||(23952592-23952646)
chr8 (4-74)||(35701742-35701812)
chr8 (1-85)||(28156302-28156386)
chr8 (1-29)||(35633913-35633941)
[»] chr2 (52 HSPs)
chr2 (1-87)||(35705803-35705889)
chr2 (1-85)||(41156891-41156975)
chr2 (1-87)||(11828706-11828792)
chr2 (3-85)||(43205194-43205276)
chr2 (1-87)||(45202018-45202104)
chr2 (1-88)||(35007986-35008073)
chr2 (1-87)||(27529626-27529712)
chr2 (3-88)||(35203634-35203719)
chr2 (1-85)||(13881194-13881278)
chr2 (1-85)||(14021319-14021403)
chr2 (1-85)||(27538820-27538904)
chr2 (4-86)||(22296016-22296098)
chr2 (1-87)||(40115614-40115700)
chr2 (4-87)||(11152585-11152668)
chr2 (4-86)||(16463394-16463476)
chr2 (4-86)||(35518377-35518459)
chr2 (1-86)||(38777990-38778075)
chr2 (4-85)||(1096231-1096312)
chr2 (1-82)||(6885371-6885452)
chr2 (1-86)||(8757643-8757728)
chr2 (3-75)||(17999845-17999917)
chr2 (1-85)||(19523289-19523373)
chr2 (4-85)||(1151631-1151712)
chr2 (8-85)||(23141460-23141537)
chr2 (8-85)||(23553250-23553327)
chr2 (4-85)||(26387719-26387800)
chr2 (8-85)||(30340100-30340177)
chr2 (4-85)||(34141545-34141626)
chr2 (1-85)||(35798308-35798392)
chr2 (8-87)||(37064164-37064243)
chr2 (1-79)||(13850078-13850156)
chr2 (1-86)||(12208541-12208626)
chr2 (4-85)||(12257003-12257084)
chr2 (4-76)||(44897728-44897800)
chr2 (1-88)||(3091840-3091926)
chr2 (1-88)||(13711160-13711246)
chr2 (43-86)||(28679268-28679311)
chr2 (4-62)||(4858215-4858273)
chr2 (1-87)||(38724203-38724289)
chr2 (4-85)||(5852560-5852641)
chr2 (8-85)||(27328997-27329074)
chr2 (5-85)||(38533086-38533166)
chr2 (43-86)||(43515032-43515075)
chr2 (1-44)||(43936389-43936432)
chr2 (47-93)||(6851692-6851738)
chr2 (4-85)||(38598238-38598318)
chr2 (4-88)||(304877-304961)
chr2 (1-29)||(694368-694396)
chr2 (8-88)||(3839516-3839596)
chr2 (1-29)||(4842463-4842491)
chr2 (1-77)||(5455350-5455425)
chr2 (4-88)||(24491562-24491646)
[»] chr3 (45 HSPs)
chr3 (1-87)||(48117435-48117521)
chr3 (4-88)||(35368713-35368797)
chr3 (1-87)||(29846777-29846863)
chr3 (3-85)||(9158924-9159006)
chr3 (2-86)||(29057748-29057832)
chr3 (1-85)||(50745648-50745732)
chr3 (4-78)||(43894880-43894954)
chr3 (1-86)||(44827052-44827137)
chr3 (4-88)||(30664603-30664687)
chr3 (4-88)||(43220027-43220111)
chr3 (1-88)||(9027712-9027799)
chr3 (21-88)||(40821745-40821812)
chr3 (1-85)||(43149231-43149315)
chr3 (4-87)||(14838931-14839014)
chr3 (1-55)||(47484378-47484432)
chr3 (1-85)||(33971982-33972066)
chr3 (4-88)||(44689905-44689989)
chr3 (1-77)||(51385336-51385412)
chr3 (1-87)||(27276833-27276919)
chr3 (4-85)||(16295566-16295647)
chr3 (4-85)||(29555729-29555810)
chr3 (26-86)||(31763931-31763991)
chr3 (1-85)||(42888661-42888744)
chr3 (4-79)||(32151995-32152070)
chr3 (1-87)||(32687846-32687932)
chr3 (4-86)||(50025572-50025654)
chr3 (1-86)||(7231894-7231978)
chr3 (12-85)||(26280676-26280749)
chr3 (5-85)||(9557820-9557900)
chr3 (1-88)||(2280276-2280363)
chr3 (1-84)||(25596036-25596118)
chr3 (4-86)||(1834608-1834690)
chr3 (43-85)||(11404842-11404884)
chr3 (4-62)||(29533863-29533921)
chr3 (1-79)||(33074972-33075050)
chr3 (4-82)||(45966715-45966793)
chr3 (3-88)||(11173551-11173635)
chr3 (4-41)||(25806456-25806493)
chr3 (4-85)||(31300904-31300985)
chr3 (58-87)||(55467819-55467848)
chr3 (1-85)||(29706002-29706085)
chr3 (1-56)||(44695110-44695166)
chr3 (3-87)||(47140561-47140645)
chr3 (1-29)||(48649680-48649708)
chr3 (1-85)||(49361725-49361809)
[»] chr6 (17 HSPs)
chr6 (1-86)||(9395224-9395309)
chr6 (1-86)||(10557508-10557593)
chr6 (4-85)||(32135325-32135406)
chr6 (1-86)||(6997437-6997522)
chr6 (1-88)||(19713093-19713180)
chr6 (3-86)||(16121253-16121336)
chr6 (3-85)||(16865630-16865712)
chr6 (1-85)||(2165188-2165272)
chr6 (1-85)||(2176821-2176905)
chr6 (1-88)||(608546-608633)
chr6 (1-87)||(22422249-22422335)
chr6 (4-86)||(34792108-34792190)
chr6 (4-88)||(17442924-17443008)
chr6 (1-88)||(32253879-32253966)
chr6 (4-79)||(7303999-7304074)
chr6 (48-84)||(12151758-12151794)
chr6 (1-29)||(32457196-32457224)
[»] chr4 (41 HSPs)
chr4 (1-85)||(22893967-22894051)
chr4 (1-85)||(22945635-22945719)
chr4 (1-88)||(4878066-4878153)
chr4 (1-88)||(24310406-24310493)
chr4 (1-86)||(53781724-53781809)
chr4 (3-87)||(1868779-1868863)
chr4 (1-88)||(8487734-8487821)
chr4 (8-88)||(4577670-4577749)
chr4 (1-85)||(31413674-31413758)
chr4 (1-85)||(45678362-45678446)
chr4 (8-84)||(48760392-48760467)
chr4 (3-82)||(33776995-33777074)
chr4 (1-88)||(6256334-6256421)
chr4 (1-88)||(9096036-9096122)
chr4 (4-89)||(50291384-50291469)
chr4 (1-81)||(43982996-43983076)
chr4 (1-81)||(51107334-51107414)
chr4 (4-82)||(43307256-43307333)
chr4 (8-89)||(36110240-36110321)
chr4 (8-85)||(38960548-38960625)
chr4 (3-87)||(56264756-56264843)
chr4 (6-86)||(18944389-18944469)
chr4 (1-85)||(29577324-29577408)
chr4 (1-85)||(38952788-38952871)
chr4 (4-87)||(8614284-8614367)
chr4 (4-87)||(32294638-32294721)
chr4 (1-62)||(1987624-1987685)
chr4 (1-86)||(31275245-31275329)
chr4 (1-85)||(5234360-5234443)
chr4 (4-79)||(21766649-21766724)
chr4 (46-85)||(36848340-36848379)
chr4 (4-87)||(46309009-46309092)
chr4 (4-87)||(46355177-46355260)
chr4 (1-88)||(47998693-47998778)
chr4 (9-87)||(46799862-46799940)
chr4 (4-85)||(36946980-36947061)
chr4 (1-29)||(29384141-29384169)
chr4 (1-29)||(36444339-36444367)
chr4 (4-88)||(42915105-42915188)
chr4 (1-41)||(44539393-44539433)
chr4 (52-84)||(44539432-44539464)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-87)||(3042-3128)
[»] chr7 (25 HSPs)
chr7 (1-83)||(38197760-38197842)
chr7 (1-86)||(37848507-37848592)
chr7 (1-87)||(22331097-22331183)
chr7 (4-85)||(23034201-23034282)
chr7 (3-85)||(17039258-17039340)
chr7 (4-79)||(27704537-27704612)
chr7 (4-85)||(1709386-1709467)
chr7 (8-88)||(47945089-47945169)
chr7 (8-88)||(47950519-47950599)
chr7 (4-86)||(7295569-7295651)
chr7 (4-85)||(24380609-24380690)
chr7 (4-85)||(29923773-29923853)
chr7 (1-87)||(2600420-2600506)
chr7 (40-82)||(2980620-2980662)
chr7 (30-80)||(40207724-40207774)
chr7 (44-85)||(11788376-11788417)
chr7 (4-85)||(37970035-37970116)
chr7 (4-85)||(41910073-41910154)
chr7 (8-85)||(45335969-45336046)
chr7 (4-85)||(48639273-48639354)
chr7 (4-84)||(41538582-41538662)
chr7 (3-62)||(41458811-41458870)
chr7 (4-79)||(44185278-44185353)
chr7 (3-86)||(6353829-6353912)
chr7 (4-84)||(32315928-32316008)
[»] chr5 (35 HSPs)
chr5 (1-82)||(35595877-35595958)
chr5 (1-85)||(6458866-6458950)
chr5 (1-81)||(14522856-14522936)
chr5 (1-88)||(33893685-33893772)
chr5 (4-86)||(42364531-42364613)
chr5 (1-84)||(12612906-12612989)
chr5 (1-88)||(17574109-17574196)
chr5 (4-86)||(9940156-9940238)
chr5 (1-86)||(29765930-29766015)
chr5 (1-82)||(43152951-43153032)
chr5 (4-87)||(37821027-37821110)
chr5 (4-86)||(18729164-18729246)
chr5 (4-86)||(25585343-25585425)
chr5 (4-84)||(8442261-8442341)
chr5 (3-85)||(3031935-3032018)
chr5 (3-88)||(3849600-3849684)
chr5 (4-85)||(12203247-12203328)
chr5 (4-85)||(34693104-34693185)
chr5 (4-85)||(39032492-39032573)
chr5 (8-88)||(21771358-21771438)
chr5 (1-88)||(2117526-2117612)
chr5 (5-87)||(30103339-30103419)
chr5 (1-86)||(12890989-12891068)
chr5 (8-78)||(38919952-38920022)
chr5 (4-85)||(35616689-35616770)
chr5 (1-85)||(3518282-3518366)
chr5 (1-85)||(39595373-39595456)
chr5 (4-82)||(22864270-22864349)
chr5 (1-88)||(33567125-33567211)
chr5 (8-79)||(36899375-36899446)
chr5 (4-62)||(5005215-5005273)
chr5 (1-82)||(11878528-11878606)
chr5 (4-85)||(14126516-14126597)
chr5 (8-88)||(35924376-35924456)
chr5 (36-88)||(43214081-43214133)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-85)||(17137-17221)
[»] scaffold0592 (1 HSPs)
scaffold0592 (5-86)||(1013-1095)
[»] scaffold0014 (1 HSPs)
scaffold0014 (4-85)||(145149-145230)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-88)||(48756-48840)
[»] scaffold0514 (1 HSPs)
scaffold0514 (8-85)||(1735-1812)
[»] scaffold0241 (1 HSPs)
scaffold0241 (65-95)||(5392-5422)
[»] scaffold0172 (1 HSPs)
scaffold0172 (35-89)||(9404-9458)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-79)||(17224-17302)


Alignment Details
Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 32370385 - 32370520
Alignment:
Q  85 ctttggattaatttatgtaacacttctcttttcccccacgcaagtttaaaatataatcgctcggtaaaaatatccatagtatacaatgatatatactaat 184  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32370385 cttttgattaatttatgtaacacttctcctttcccccacgcgagtttaaaatataatcgctcggtaaaaatatccatagtatacaatgatatatactaat 32370484  T
Q  185 atccaatttcatttattttatcccattctattccat 220  Q
    ||||||||||||||||||||||||||||||||||||    
T  32370485 atccaatttcatttattttatcccattctattccat 32370520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40240083 - 40239998
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||||||||| | ||||||||||  || ||||||||||||||||||||||||||||||||||| ||||||||    
T  40240083 tccattgtttttgaccaatgaaaagatagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatattattactct 40239998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 51666862 - 51666942
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    |||||||||||||||| |||| |||||||||||| |||||||||||| || |||||||| |||||||||||||||| ||||    
T  51666862 attgtttttgaccaataaaaagagagcacaacaatattatcccaaaaattatagcaaaatagttgttcaaatatcactact 51666942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37947192 - 37947112
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatt 81  Q
    ||||||||||||||||||||| || |||| |||||||  || |||||||||||||| ||||| ||||||||||||||||||    
T  37947192 tccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaacaaaatagttgttcaaatatcatt 37947112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 12972675 - 12972592
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||| |||||||| |||||||||||| ||| ||||||| || ||||| | |||||||||||||| |||||||    
T  12972675 attgtttttgaccaataaaaaaagaacacaacaaaattgtcctaaaagttataccaaaagaattgttcaaatatcactactctt 12972592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37435546 - 37435467
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagc-aaaaaagttgttcaaatatca 79  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||| || |||| |||||| ||||||||||||||    
T  37435546 tccattgtttttgaccaataaaaaaagagcacaacaaagttgtcccaaaaattatagcaaaaaaaattgttcaaatatca 37435467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8577474 - 8577388
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||||||||||| || |||| |||||||  || ||||||||||| || ||||| |||||||||||||||||| |||||    
T  8577474 tccattgtttttgaccaatgagaatagagaacaacaaggttgtcccaaaagttataccaaaatagttgttcaaatatcattgctctt 8577388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 29638817 - 29638898
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || ||| |||||||||||| |||||||| ||||| ||||| |||||||||||||||| |||||    
T  29638817 attgtttttgaccaataagaagagaacacaacaaaattgtcccaaaaattgtaccaaaagagttgttcaaatatcactactc 29638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 40118686 - 40118601
Alignment:
Q  2 ccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||| |||| |||||| |||| | ||||||||||  || |||||||| ||||||||||||| ||||||||||||||||||||||    
T  40118686 ccattgattttaaccaataaaaagaaagcacaacaaggttgtcccaaaaattgtagcaaaaaaattgttcaaatatcattactctt 40118601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 4490694 - 4490615
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattac 83  Q
    ||||||||||||||||||||| ||||||||  || ||| |||||||| |||||| ||||||||||| ||||||| |||||    
T  4490694 attgtttttgaccaatgaaaagagagcacagtaatattgtcccaaaaattgtagtaaaaaagttgtgcaaatatgattac 4490615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 26760661 - 26760744
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    ||||||||||||||||||| |||| ||||||||||||  || || |||||||| || ||||||||||||| ||||| |||||||    
T  26760661 tccattgtttttgaccaataaaaagagagcacaacaaggttgtctcaaaagttataacaaaaaagttgtttaaataacattact 26760744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31244707 - 31244620
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||||||||||||||| || |||| ||||||   || ||||||| |||||| ||||| |||||||||||||||||| ||||||    
T  31244707 tccattgtttttgaccaatgagaagagagaacaacatggttgtcccaaatgttgtaccaaaatagttgttcaaatatcattgctcttt 31244620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 41564849 - 41564765
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||| | || ||| ||||||||  || |||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  41564849 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 41564765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 50460681 - 50460601
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaag-ttgttcaaatatcattac 83  Q
    |||||||||||||||| |||| | | |||||||||||| |||||||| |||||||||||| | || |||||||||||||||    
T  50460681 attgtttttgaccaataaaaagaaaacacaacaaaattgtcccaaaaattgtagcaaaaatgttttttcaaatatcattac 50460601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 22674803 - 22674874
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    ||||||||| |||| || |||  ||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  22674803 tttttgaccgatgagaagagaaaacaacaaaattattccaaaagttgtaccaaaaaaattgttcaaatatca 22674874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 29094717 - 29094635
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||| ||||||||||| | || ||| ||||| ||  || |||||||||||||| ||||| |||||||||||||||||||||||    
T  29094717 attgattttgaccaataagaagagaacacaataaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcattactct 29094635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 48962088 - 48962170
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||| | || ||| ||||||||  || |||||||| ||||| ||||| |||||||||||||||| ||||||    
T  48962088 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcaatactct 48962170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4618743 - 4618804
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaa 62  Q
    |||||| |||||||||||||||||||||| |||||||  |||||||||||||| || |||||    
T  4618743 tccattatttttgaccaatgaaaaaagagaacaacaaggttatcccaaaagttataccaaaa 4618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 12990454 - 12990373
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||| ||||||| ||| |||| ||| ||||||||  || |||||||||||||| ||||| |||||||||||||||| |||||    
T  12990454 attgattttgacaaataaaaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactc 12990373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43105204 - 43105284
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatt 81  Q
    |||||| |||||||||||| |||| |||| |||| ||| || |||||||| ||||| ||||| | ||||||||||||||||    
T  43105204 tccattatttttgaccaataaaaagagagaacaataaagttgtcccaaaaattgtaccaaaataattgttcaaatatcatt 43105284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 46903572 - 46903656
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||| || |||| |||||||| || || |||| |||||| |||||  |||||| |||||||| ||||||||    
T  46903572 attgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 46903656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 48257015 - 48257055
Alignment:
Q  45 ccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  48257015 ccaaaaattgtagcaaaaaagttgttcaaatatcattactc 48257055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 40053012 - 40053091
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||||||| |||| |||||||| || || ||||  ||||| ||||| ||||||| |||||||| |||||||    
T  40053012 tttttgaccaatgaaaagagagaacaacaaagttgtctcaaagattgtaccaaaatagttgttaaaatatcactactctt 40053091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 5574244 - 5574162
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||| |||||||| ||||| ||| || |||||||| || || ||||  | |||||||||||||| ||||||    
T  5574244 attgtttttgaccaataaaaaaagaacacaataaagttgtcccaaaaattatatcaaacgaattgttcaaatatcactactct 5574162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 23399958 - 23399876
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||| | || ||| ||||||||  || |||||||| ||||| ||||| ||||||| |||||||| ||||||    
T  23399958 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgtttaaatatcactactct 23399876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 30414966 - 30415032
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgtt 70  Q
    |||||||||||||||| | || ||| |||||||| ||| |||||||||||||| ||||| |||||||    
T  30414966 attgtttttgaccaataagaagagaacacaacaagattgtcccaaaagttgtaccaaaagagttgtt 30415032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 48028625 - 48028709
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||| |||||||| || |||| |||||||| || | |||||| ||| | ||||| | |||||||||||||||||||||    
T  48028625 tccattgtttttaaccaatgagaagagagaacaacaaagttgtaccaaaaattg-atcaaaataattgttcaaatatcattactct 48028709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 28457317 - 28457241
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    |||||||||||||||||||||| |||| |||| ||| || || |||| |||||| |||||  |||||| ||||||||    
T  28457317 cattgtttttgaccaatgaaaatagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 28457241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 27954330 - 27954413
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||||| || |||| |||||||| || | |||||| ||||   |||| | |||||||||||||| |||||||    
T  27954330 attgtttttgaccaatgagaagagagaacaacaaagttgttccaaaaattgtgctaaaagaattgttcaaatatcactactctt 27954413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 33111878 - 33111831
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgt 55  Q
    |||||||||||| |||| | | ||||||||||||||||||||||||||    
T  33111878 tttttgaccaataaaaagatatcacaacaaaattatcccaaaagttgt 33111831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 43757688 - 43757771
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||| ||||||||||| |||| |||||||| || || ||||| || || ||||| ||||||  |||||||| |||||||    
T  43757688 attgtttttaaccaatgaaaagagagaacaacaaagttgtctcaaaaattataccaaaatagttgtcaaaatatcactactctt 43757771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 835980 - 836054
Alignment:
Q  11 ttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||| || |||  | ||||| ||| |||||||||||||| ||||| ||||||||||||| || |||||    
T  835980 ttgaccaatgagaagagaaaataacaagattgtcccaaaagttgtaccaaaagagttgttcaaataacactactc 836054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 11897318 - 11897359
Alignment:
Q  46 caaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||    
T  11897318 caaaaattgtaacaaaagagttgttcaaatatcattactctt 11897359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 35030696 - 35030659
Alignment:
Q  51 gttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  35030696 gttgtaccaaaatagttgttcaaatatcattactcttt 35030659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 11121587 - 11121659
Alignment:
Q  9 ttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatt 81  Q
    |||| |||||||| || |||  ||||||| ||| || |||||||| || ||||| ||||||||||||||||||    
T  11121587 ttttaaccaatgagaagagacaacaacaagattgtcacaaaagttataccaaaatagttgttcaaatatcatt 11121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16252745 - 16252709
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaa 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  16252745 tccattgtttttgaccaatgaaaagagtgcacaacaa 16252709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 30596819 - 30596891
Alignment:
Q  7 gtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    |||||||||||||||||| | || |||| ||| || || |||| |||||| ||||| || |||||||||||||    
T  30596819 gtttttgaccaatgaaaagaaagaacaataaagttgtctcaaaggttgtaccaaaatagctgttcaaatatca 30596891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35030734 - 35030698
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaa 37  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  35030734 tccattgtttttgaccaataaaaaaagagaacaacaa 35030698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 48336427 - 48336347
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatt 81  Q
    |||||||| |||||||||| | ||  ||| ||| |||  || ||| |||||||||| ||||| ||||||||||||||||||    
T  48336427 tccattgtgtttgaccaataagaagggagaacatcaaggttgtccaaaaagttgtaacaaaatagttgttcaaatatcatt 48336347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37471742 - 37471828
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37471742 tccattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 37471828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22836111 - 22836024
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22836111 tccattgtttttgaccaatgaaaagagagcacaacaaggttatcccaaaaattgtagcaaaaaagttgttcaaatatcattactcttt 22836024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41776274 - 41776361
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||    
T  41776274 tccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 41776361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21649142 - 21649055
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||| |||||||||||| |||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||    
T  21649142 tccattatttttgaccaataaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 21649055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22203187 - 22203101
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||||||||| |||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||||| |||||    
T  22203187 tccattgtttttgaccaatcaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattgctctt 22203101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 23265323 - 23265240
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||||||||||| |||| |||||||||||||||| || ||||||||||| ||||||||||||| |||||||||||||||    
T  23265323 cattgtttttgaccaataaaaagagagcacaacaaaattgtcgcaaaagttgtaacaaaaaagttgtttaaatatcattactct 23265240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6243133 - 6243202
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgtt 70  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||    
T  6243133 tccattgtttttgaccaatgaaaagagagcacaacaaaattgtcccaaaagttgtagcaaaaaaattgtt 6243202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33692820 - 33692905
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||| ||||||||||||||||| ||||||||||||| || |||||||| || || |||||||||||||||||||||||||||||    
T  33692820 tccattatttttgaccaatgaaaagagagcacaacaaagttgtcccaaaaattataacaaaaaagttgttcaaatatcattactct 33692905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 43590793 - 43590878
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||||||||| ||||||||| |||||| || ||||| || ||| ||||||||||||||||||||||||||||    
T  43590793 tccattgtttttgaccaatgaaaagagagcacaataaaattgtctcaaaaattatagtaaaaaagttgttcaaatatcattactct 43590878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1646355 - 1646442
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||||| |||||||||||| ||||||||| || ||| | |||||| || ||||||||||||||||||||||||||||||||||    
T  1646355 tccattgttttagaccaatgaaaagagagcacaataagattgttccaaaaattatagcaaaaaagttgttcaaatatcattactcttt 1646442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10591845 - 10591760
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||||||||  |||||||||| ||||||||||| || |||||||| ||||||| ||||| |||||||||||||||||||||    
T  10591845 tccattgtttttgagaaatgaaaaaatagcacaacaaagttgtcccaaaaattgtagcgaaaaaattgttcaaatatcattactct 10591760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 23709078 - 23709162
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||| |||||||||||||| |||||| |||||  || |||||||| ||||||||||||||||||||||||| |||||||||||    
T  23709078 attgttcttgaccaatgaaaagagagcataacaaggttgtcccaaaaattgtagcaaaaaagttgttcaaataacattactcttt 23709162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 32777985 - 32778066
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||| |||||||| |||||||||||| ||| || ||||| ||||||||||||||||||| |||||||||||||||    
T  32777985 attgtttttgactaatgaaaagagagcacaacaagattgtctcaaaa-ttgtagcaaaaaagttgtttaaatatcattactct 32778066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1422674 - 1422593
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 82  Q
    |||||||||||||||||||||||||| || | |||||  || |||||||||||||| ||||| |||||||||||||||||||    
T  1422674 tccattgtttttgaccaatgaaaaaatagaataacaaggttgtcccaaaagttgtatcaaaatagttgttcaaatatcatta 1422593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8233468 - 8233383
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||||||||||||||| || |||| |||||||  |||||| ||||||||||  |||| || ||||||||||||||||||||    
T  8233468 tccattgtttttgaccaatgagaagagagaacaacaaggttatccaaaaagttgtacaaaaatagatgttcaaatatcattactct 8233383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 18550081 - 18550163
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||||| |||| | || ||| ||||||||  || |||||||||||||| ||||| |||||||||||||||||||||||    
T  18550081 attgtttttgatcaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactct 18550163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 25430748 - 25430830
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||| | || ||| ||||||||  || |||||||||||||| ||||| |||||||||||||||| ||||||    
T  25430748 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactct 25430830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 34247876 - 34247957
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||||| |||| |||||||  || |||||||||||||  |||||  ||||| |||||||||||||||    
T  34247876 attgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaagttgtctcaaaagggttgtacaaatatcattactc 34247957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 42651022 - 42651106
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||| |||||||| || |||| |||||||  || || ||||||||||| ||||| ||||||||||||||||||| |||||    
T  42651022 attgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaagttgtaccaaaatagttgttcaaatatcattattcttt 42651106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 39386892 - 39386810
Alignment:
Q  2 ccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    |||||| ||||||| |||||||| |||| |||| || ||| ||| |||| |||||| ||||||||| ||||||||||||||||    
T  39386892 ccattgattttgactaatgaaaagagagtacaataagattgtccaaaaaattgtagaaaaaaagtttttcaaatatcattact 39386810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 13924111 - 13924192
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||| |||| |||||||| || |||| ||||||| ||| || ||||||||||| ||||| |||||||||||||| |||||||    
T  13924111 attggttttaaccaatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaagagttgttcaaatattattactc 13924192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 9227371 - 9227455
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||| |||| | || |||| |||||| |||||||| || || ||||  | |||||||||||||||||||||||    
T  9227371 attgtttttgaccaataaaaagatagaacaataaaattgtcccaaaaattatatcaaattaattgttcaaatatcattactcttt 9227455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14233616 - 14233532
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||| |||||||| || |||| |||||||| || || |||||||| || ||||| | ||||||| ||||||||||||    
T  14233616 tccattgttttttaccaatgagaagagagaacaacaaagttgtcacaaaagttataccaaaataattgttcagatatcattactc 14233532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 27300448 - 27300523
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    |||||||||||||||| | || |||  ||||||| ||| |||||||||||||| | ||| ||||||||||||||||    
T  27300448 attgtttttgaccaataagaagagaatacaacaagattgtcccaaaagttgtaccgaaagagttgttcaaatatca 27300523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 34838239 - 34838164
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    |||||||||||||||| | || ||| ||||||||  || ||| |||||||||| ||||| ||||||||||||||||    
T  34838239 attgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatca 34838164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 28713195 - 28713279
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||| ||||||| | || |||  |||||||  || |||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  28713195 attgttttcgaccaataagaagagaatacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 28713279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 28720542 - 28720626
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||| ||||||| | || |||  |||||||  || |||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  28720542 attgttttcgaccaataagaagagaatacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 28720626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 28728184 - 28728268
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||| ||||||| | || |||  |||||||  || |||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  28728184 attgttttcgaccaataagaagagaatacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 28728268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 34578306 - 34578226
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    ||||||||||| |||| | || |||| |||||||| || |||||||| || || ||||| ||||||| |||||||||||||    
T  34578306 attgtttttgatcaataagaagagagaacaacaaagttgtcccaaaaattataccaaaatagttgttaaaatatcattact 34578226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 40570649 - 40570693
Alignment:
Q  43 tcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||| || || ||||||||||||||||||||||||||||||    
T  40570649 tcccaaaaattataacaaaaaagttgttcaaatatcattactctt 40570693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 45405804 - 45405720
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||| || |||| |||| ||| || || |||| |||||| |||||  |||||| |||||||| ||||||||    
T  45405804 attgtttttgaccaatgagaagagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 45405720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 4148624 - 4148542
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||| | ||  || ||||| ||  || |||||||||||||| ||||| ||| |||||||||||| ||||||    
T  4148624 attgtttttgaccaataagaagggaacacaataaggttgtcccaaaagttgtaccaaaagagtcgttcaaatatcactactct 4148542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 5742629 - 5742543
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||||||||||| || |||| |||||||| || || |||| | |||| |||||  |||||  |||||||| |||||||    
T  5742629 tccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggatgtaccaaaatggttgtcaaaatatcactactctt 5742543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23952592 - 23952646
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgt 55  Q
    |||||| |||||||||||| ||||||||| | |||||||||||| | ||||||||    
T  23952592 tccattatttttgaccaataaaaaaagagaaaaacaaaattatcactaaagttgt 23952646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 35701812 - 35701742
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaa 74  Q
    |||||||||||||||| | || ||| || ||||| ||| |||||||||||||| ||||| | |||||||||    
T  35701812 attgtttttgaccaataagaagagaacataacaagattgtcccaaaagttgtaccaaaagaattgttcaaa 35701742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28156302 - 28156386
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||| |||||||||||||||| || |||| |||||||| || || |||| ||||||  |||| ||||||  |||||||| |||||    
T  28156302 tccaatgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtactaaaatagttgtcaaaatatcactactc 28156386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 35633941 - 35633913
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagag 29  Q
    |||||||||||||||||||||||||||||    
T  35633941 tccattgtttttgaccaatgaaaaaagag 35633913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 35705889 - 35705803
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35705889 tccattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 35705803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 41156975 - 41156891
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  41156975 tccattgcttttgaccaatgaaaagagagcacaacaaaattgtcccaaaagttgtagcaaaaaaattgttcaaatatcattactc 41156891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 11828792 - 11828706
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||||||||||| ||||||||||||  || ||| |||||||||||||||||||||||||||||||||||||||||    
T  11828792 tccattgtttttgaccaatgaaaagagagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaatatcattactctt 11828706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 43205194 - 43205276
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  43205194 cattgtttttgaccaatgaaaagagagcacaacaaagttgtcccaaaagttgtagcaaaaaagttgttcaaataacattactc 43205276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 45202104 - 45202018
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||| ||||||||| ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||    
T  45202104 tccattgtttttgatcaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 45202018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35008073 - 35007986
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||| ||||||||||||||| ||||||||||||  || ||||||||||||||| ||||||||||||||||||||||||||||||    
T  35008073 tccattgtgtttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaatatcattactcttt 35007986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 27529626 - 27529712
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||||||||||| | ||||||||||  || |||| |||||||||||||| |||||||||||||||||||||||||    
T  27529626 tccattgtttttgaccaatgaaaagaaagcacaacaaggttgtcccgaaagttgtagcaaagaagttgttcaaatatcattactctt 27529712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 35203719 - 35203634
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||||||| | ||||||||||  || |||||||| ||||||||||||| |||||||||||||||||||||||    
T  35203719 cattgtttttgaccaatgaaaagatagcacaacaaggttgtcccaaaaattgtagcaaaaaaattgttcaaatatcattactcttt 35203634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13881194 - 13881278
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||||| ||||||||| ||| || || |||||||||||||||||||||| ||||||| |||||||||    
T  13881194 tccattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgtagcaaaaaagtttttcaaatgtcattactc 13881278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14021319 - 14021403
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||||| ||||||||| ||| || || |||||||||||||||||||||| ||||||| |||||||||    
T  14021319 tccattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgtagcaaaaaagtttttcaaatgtcattactc 14021403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27538904 - 27538820
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||||| | ||||||||||  || |||| |||||||||||||||||||||||||||||| |||||||    
T  27538904 tccattgtttttgaccaatgaaaagaaagcacaacaaggttgtcccgaaagttgtagcaaaaaagttgttcaaatattattactc 27538820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 22296098 - 22296016
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||| |||||||||||||||||||||||||||||  || |||||||| |||||| ||||||||||||||||||| ||||||||    
T  22296098 attgattttgaccaatgaaaaaagagcacaacaaggttgtcccaaaaattgtagaaaaaaagttgttcaaatattattactct 22296016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 40115614 - 40115700
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||||  |||||||| ||||||||||||  || |||||||| |||||| |||||||||||||||||||||||||||||    
T  40115614 tccattgtttttgatgaatgaaaagagagcacaacaaggttgtcccaaaaattgtagtaaaaaagttgttcaaatatcattactctt 40115700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 11152668 - 11152585
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||| |||| ||| |||||||| ||| ||||||||| |||| ||||||| ||||||||||||||||||||||    
T  11152668 attgtttttgaccaataaaaagagaacacaacaagattgtcccaaaagctgtaccaaaaaatttgttcaaatatcattactctt 11152585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 16463394 - 16463476
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||| | || |||||||||||| ||| |||||||||||||| || || |||||||||||||||||||||||    
T  16463394 attgtttttgaccaataagaagagagcacaacaagattgtcccaaaagttgtaccataagagttgttcaaatatcattactct 16463476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 35518377 - 35518459
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||| | || |||| |||||||| || |||||||||||||| ||||| |||||||||||||||||||||||    
T  35518377 attgtttttgaccaataagaagagagaacaacaaagttgtcccaaaagttgtatcaaaatagttgttcaaatatcattactct 35518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38777990 - 38778075
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||| ||| ||||||  ||||||||||||  || ||||||||||| ||||||||||||| ||||||||||||||||||    
T  38777990 tccattgttttttacccatgaaatgagagcacaacaaggttgtcccaaaagttatagcaaaaaagttattcaaatatcattactct 38778075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 1096312 - 1096231
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || ||| |||||||||||| ||| |||||||||| ||||| |||||||||||||||| |||||    
T  1096312 attgtttttgaccaataagaagagaacacaacaaaattgtcctaaaagttgtatcaaaagagttgttcaaatatcactactc 1096231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6885452 - 6885371
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 82  Q
    |||||||||||||| ||||||||| |||||| |||||| || ||| |||| |||||  ||||||||||||||||||||||||    
T  6885452 tccattgtttttgatcaatgaaaagagagcataacaaagttgtcctaaaaattgtattaaaaaagttgttcaaatatcatta 6885371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8757643 - 8757728
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||||||||||||| | || |||| |||||||  || | |||||||||||| ||||| |||||||||||||||||||||||    
T  8757643 tccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactct 8757728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 17999845 - 17999917
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaat 75  Q
    |||||||||||||||||||||| | | ||||||||  || ||||||||||| |||||||||||||||||||||    
T  17999845 cattgtttttgaccaatgaaaagatatcacaacaaggttgtcccaaaagttatagcaaaaaagttgttcaaat 17999917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 19523373 - 19523289
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||| |||| |||| |||| |||||| | |||||| ||||| ||||| ||||||| ||||||||||||||    
T  19523373 tccattgtttttgaccaataaaaagagagaacaataaaattgtaccaaaaattgtaccaaaatagttgtttaaatatcattactc 19523289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 1151631 - 1151712
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||||||| |||||||| || || |||| |||||| ||||| ||||||  |||||||| |||||    
T  1151631 attgtttttgaccaatgaaaaaagagaacaacaaagttgtctcaaaggttgtaccaaaatagttgtcaaaatatcactactc 1151712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 23141460 - 23141537
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||| || |||| |||||||  || |||||||||||||| ||||| |||||||||||||||| |||||    
T  23141460 tttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23141537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 23553250 - 23553327
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||| || |||| |||||||  || |||||||||||||| ||||| |||||||||||||||| |||||    
T  23553250 tttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23553327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 26387800 - 26387719
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||| ||||||||||| | |||||| ||||||||  || |||||||||||||| ||||| |||||||||||||||| |||||    
T  26387800 attgattttgaccaataagaaaagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactc 26387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 30340100 - 30340177
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||| || |||| |||||||  || |||||||||||||| ||||| |||||||||||||||| |||||    
T  30340100 tttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 30340177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 34141545 - 34141626
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || ||| ||||||||| || | |||||||||||| ||||| |||||||||||||||| |||||    
T  34141545 attgtttttgaccaataagaagagaacacaacaaagttgttccaaaagttgtaccaaaagagttgttcaaatatcactactc 34141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 35798308 - 35798392
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||| |||||| |||| | ||||||||||  || |||||||| || || ||||||||||||||||||| ||||||||    
T  35798308 tccattgtttttaaccaataaaaagaaagcacaacaaggttgtcccaaaaattataacaaaaaagttgttcaaataacattactc 35798392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 37064164 - 37064243
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||| || |||  |||||||  ||||||||||||||||| ||||| ||||| |||||||||| |||||||    
T  37064164 tttttgaccaatgagaagagaaaacaacaaggttatcccaaaagttgtaccaaaagagttgatcaaatatcagtactctt 37064243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13850156 - 13850078
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    |||||| ||||||||||||||||| |||| ||||||||||| || |||||||| || ||||| ||||||  ||||||||    
T  13850156 tccattatttttgaccaatgaaaagagagaacaacaaaattgtctcaaaagttataccaaaatagttgtcaaaatatca 13850078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 12208541 - 12208626
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||| |||||||||||||||| || | ||||||||| |  |||||||||||  |||| ||||||||||||| || ||||||    
T  12208541 tccattgttattgaccaatgaaaaaaaagaataacaaaattgttacaaaagttgtactaaaagagttgttcaaataacactactct 12208626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 12257003 - 12257084
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || | | ||||||||  || |||||||| ||||| |||||||||||||||||||||| |||||    
T  12257003 attgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgtaccaaaaaagttgttcaaatatcactactc 12257084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 44897728 - 44897800
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaata 76  Q
    |||| ||||||||||| |||| ||| ||||||||  || |||||||||||||| ||||| |||||||||||||    
T  44897728 attgattttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaata 44897800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3091840 - 3091926
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||||||||| |||| | ||  || || || ||||||||||| |||| || |||||||||||||| ||||||||    
T  3091840 tccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaataa-ttgttcaaatatcactactcttt 3091926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13711160 - 13711246
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||| ||||||||||| |||| | ||  || || || ||||||||||| ||||| |||||||||||||||| ||||||||    
T  13711160 tccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgta-caaaatagttgttcaaatatcactactcttt 13711246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 28679268 - 28679311
Alignment:
Q  43 tcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  28679268 tcccaaaagttgtaccaaaagagttgttcaaatatcattactct 28679311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 4858215 - 4858273
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaa 62  Q
    ||||||||||||||||||||| |||| ||||||||||| || |||| |||||| |||||    
T  4858215 attgtttttgaccaatgaaaagagagaacaacaaaattgtctcaaaggttgtaccaaaa 4858273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 38724289 - 38724203
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||||||||| | |||| |||||||| || || |||| |||||| |||||  |||||  |||||||| |||||||    
T  38724289 tccattgtttttgaccaatgaatagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactctt 38724203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 5852560 - 5852641
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||| ||| | || ||| ||||||||  || ||||||||||| || ||||| |||||||||||||||| |||||    
T  5852560 attgtttttgacaaataagaagagaacacaacaaggttgtcccaaaagttttaccaaaagagttgttcaaatatcactactc 5852641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 27329074 - 27328997
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||| ||||||| |||||||| || || |||||| |||| |||||  |||||| |||||||| |||||    
T  27329074 tttttgaccaatgagaaaagagaacaacaaagttgtctcaaaagatgtaccaaaattgttgttaaaatatcactactc 27328997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 38533166 - 38533086
Alignment:
Q  5 ttgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||| || |||| |||||||  || |||||||| ||||| ||||| | || ||||||||||| |||||    
T  38533166 ttgtttttgaccaatgacaatagagaacaacaaggttgtcccaaaaattgtaccaaaagaattattcaaatatcactactc 38533086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 43515032 - 43515075
Alignment:
Q  43 tcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||    
T  43515032 tcccaaaagttgtaacaaaagagttgttcaaatatcatcactct 43515075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43936432 - 43936389
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatc 44  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||    
T  43936432 tccattgtttttgaccaataaaaaaagagaaaaacaaaattatc 43936389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 6851692 - 6851738
Alignment:
Q  47 aaaagttgtagcaaaaaagttgttcaaatatcattactctttggatt 93  Q
    |||||||||||||||| || ||| ||||||||||| |||||||||||    
T  6851692 aaaagttgtagcaaaatagatgtacaaatatcatttctctttggatt 6851738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 38598318 - 38598238
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || ||| ||||||||  || || |||||||| || | |||||||||||||||||||| |||||    
T  38598318 attgtttttgaccaataagaagagaacacaacaaggttgtcacaaaagttata-ctaaaaagttgttcaaatatcactactc 38598238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 304961 - 304877
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||| || || | |||||||| || || |||| |||||| |||||  |||||| ||||||||  |||||||    
T  304961 attgtttttgaccaatgagaagagtgaacaacaaagttgtctcaaaggttgtatcaaaatggttgttaaaatatcacaactcttt 304877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 694368 - 694396
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagag 29  Q
    |||||||||||||||||||||||||||||    
T  694368 tccattgtttttgaccaatgaaaaaagag 694396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 3839516 - 3839596
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||| ||||||||| |||| |||||| || |||||||| ||  ||||   |||||  ||||||||||||||||    
T  3839516 tttttgaccaataaaaaaagagaacaataaaattgtcacaaaagttatactaaaatgattgttagaatatcattactcttt 3839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 4842491 - 4842463
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagag 29  Q
    |||||||||||||||||||||||||||||    
T  4842491 tccattgtttttgaccaatgaaaaaagag 4842463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5455425 - 5455350
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatat 77  Q
    |||||||||||| ||||||||||| |||| | ||  |||||| |||||||||||||  ||||  |||||||||||||    
T  5455425 tccattgtttttaaccaatgaaaagagagaaaaaagaaattaccccaaaagttgta-taaaatggttgttcaaatat 5455350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 24491646 - 24491562
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||| |||||| | || |||| |||| || ||| || ||||||||||| ||||| | |||||||||||||| | ||||||    
T  24491646 attgtttttaaccaataagaagagagaacaataagattgtctcaaaagttgtatcaaaagaattgttcaaatatcactgctcttt 24491562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 48117435 - 48117521
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||    
T  48117435 tccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 48117521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 35368713 - 35368797
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||| ||||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  35368713 attgttttttaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaacaagttgttcaaatatcattactcttt 35368797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29846863 - 29846777
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||| ||||| ||||| ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||    
T  29846863 tccattgttttttaccaacgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 29846777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 9159006 - 9158924
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||| ||||||||||||  || |||||||||||||||||||||||||||||||  ||||||||||    
T  9159006 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaccatcattactc 9158924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 29057748 - 29057832
Alignment:
Q  2 ccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||| |||| ||||||||||| ||||||||||||  || |||||||||||||||||||||| |||||||||||||||||||||    
T  29057748 ccattgattttaaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaaattgttcaaatatcattactct 29057832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 50745648 - 50745732
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||||| ||||||||||||  || |||||||| || |||||||||| ||||||||||||||||||||    
T  50745648 tccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaaattatagcaaaaaaattgttcaaatatcattactc 50745732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 43894954 - 43894880
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatc 78  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||| || ||||||||||||||||||||||||    
T  43894954 attgtttttgaccaatgaaaagagagcacaacaaagttgtcccaaaaattatagcaaaaaagttgttcaaatatc 43894880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44827052 - 44827137
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||||||| | |||||||| | ||||||||||  || ||| ||||||||||||||||||||||||||||||||||||||||    
T  44827052 tccattgtttttggctaatgaaaagacagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaatatcattactct 44827137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 30664603 - 30664687
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||| |||| ||| |||||||||||| | |||||||||||| |||||||||| ||||||||||| ||||||||    
T  30664603 attgtttttgaccaataaaaagagaacacaacaaaattgttccaaaagttgtaccaaaaaagttattcaaatatcactactcttt 30664687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 43220111 - 43220027
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||| ||||||||||||| || |||| ||||||||||| ||||||||||| ||  ||||||||||||||||||||| ||||||||    
T  43220111 attgcttttgaccaatgagaatagagaacaacaaaattgtcccaaaagttatactaaaaaagttgttcaaatatcactactcttt 43220027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9027712 - 9027799
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||||||||||||| | || |||| |||||||  || | |||||||||||| ||||| |||||||||||||||||||||||||    
T  9027712 tccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactcttt 9027799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 40821812 - 40821745
Alignment:
Q  21 aaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||| ||||||||||||  || ||||||||||||||| ||||||||||||||||||||||||||||||    
T  40821812 aaaagagagcacaacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaatatcattactcttt 40821745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 43149315 - 43149231
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||| | || |||| |||||||  || | |||||||||||| ||||| ||||||||||||||||||||||    
T  43149315 tccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 43149231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 14839014 - 14838931
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||| |||| ||| ||||||||  || |||||||| ||||| ||||| |||||||||||||||| |||||||    
T  14839014 attgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactctt 14838931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47484378 - 47484432
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgt 55  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  47484378 tccattgtttttgaccaatgaaaagagagcacaacaaagttatcccaaaaattgt 47484432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 33971982 - 33972066
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||| |||||||| || |||| |||||||  || || ||||| ||||| ||||| ||||||||||||||||||||||    
T  33971982 tccattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatcattactc 33972066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 44689905 - 44689989
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||| |||| ||| ||||||||  || |||||||||||||  ||||| | |||||||||||||| ||||||||    
T  44689905 attgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgttccaaaagaattgttcaaatatcactactcttt 44689989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 51385412 - 51385336
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatat 77  Q
    |||||||||||||||||||||||| |||| ||||||   || ||||||||||||||  |||| ||||||||||||||    
T  51385412 tccattgtttttgaccaatgaaaagagagaacaacatggttgtcccaaaagttgtactaaaatagttgttcaaatat 51385336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 27276833 - 27276919
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||| | |||| ||||||||  |||||||  || || ||||| ||||| ||||| ||||||||||||||||||||||||    
T  27276833 tccattgtttttaatcaataaaaaaagaaaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatcattactctt 27276919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 16295566 - 16295647
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| |||| |||| |||||||| || || ||||||||||| ||||| ||||||  |||||||| |||||    
T  16295566 attgtttttgaccaataaaaagagagaacaacaaagttgtctcaaaagttgtaccaaaatagttgtcaaaatatcactactc 16295647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 29555810 - 29555729
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||| ||| | || ||| ||||||||  || |||||||||||||| ||||| |||||||||||||||| |||||    
T  29555810 attgtttttgactaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 29555729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 31763931 - 31763991
Alignment:
Q  26 agagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||| ||||||||||| |||||||| ||||| ||||| ||||||| |||||||||||||||    
T  31763931 agagaacaacaaaattgtcccaaaaattgtaccaaaatagttgtttaaatatcattactct 31763991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 42888744 - 42888661
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||| |||| ||| |||| |||  ||  ||||||| || || ||||||||||||||||||||||||||||    
T  42888744 tccattgtttttgaccaataaaaagagaacacagcaaggttg-cccaaaaattataacaaaaaagttgttcaaatatcattactc 42888661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 32151995 - 32152070
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    ||||||||| |||||| | || ||| ||||||||| || ||| |||| ||||| ||||||||||||||||||||||    
T  32151995 attgtttttaaccaataagaagagaacacaacaaagttgtcctaaaaattgtaccaaaaaagttgttcaaatatca 32152070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 32687932 - 32687846
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatc-ccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||| ||||||||||| |||| | ||  || ||||| |||||||||||| |||| | |||||||||||||||||||||||    
T  32687932 tccattgtttttaaccaatgaaaagagagaaaaaagaagttatcaccaaaagttgtatcaaata-gttgttcaaatatcattactctt 32687846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 50025654 - 50025572
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||| || |||| |||||||| || || |||| |||||| |||||  |||||  |||||||||||||||    
T  50025654 attgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtgaaaatatcattactct 50025572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 7231978 - 7231894
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||||||||| |||| | ||  ||||| || ||||||||||| | |||  ||||||||||||||| ||||||    
T  7231978 tccattgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtatc-aaatggttgttcaaatatcactactct 7231894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 26280749 - 26280676
Alignment:
Q  12 tgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||| |||||||| |||| ||||||| |||||||||||| || || ||||| | |||||||||||| |||||||    
T  26280749 tgactaatgaaaagagagaacaacaagattatcccaaaaattataccaaaataattgttcaaatattattactc 26280676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 9557900 - 9557820
Alignment:
Q  5 ttgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||| |||||||| || |||| ||||||||||| || ||||||||||| ||||| | ||||  |||||||| |||||    
T  9557900 ttgtttttaaccaatgagaagagagaacaacaaaattgtctcaaaagttgtaccaaaataattgtcaaaatatcactactc 9557820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2280276 - 2280363
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||||||||||||||| || |||| |||||||| || || ||||  ||||| |||||  |||||  |||||||| ||||||||    
T  2280276 tccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatggttgtcaaaatatcactactcttt 2280363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25596036 - 25596118
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    ||||||||||||||||||  ||||||||| ||||  | ||| |||| |||||||||  |||| |||||||||||||| ||||||    
T  25596036 tccattgtttttgaccaac-aaaaaagagaacaatgagattgtccctaaagttgtactaaaatagttgttcaaatattattact 25596118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 1834608 - 1834690
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||||| ||||| | || || ||| ||||||||||| |   ||||  ||||| ||||||||||||||||    
T  1834608 attgtttttgaccaatgaaagaagagaataataagattgtcccaaaagttatttaaaaagggttgtacaaatatcattactct 1834690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 11404884 - 11404842
Alignment:
Q  43 tcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||    
T  11404884 tcccaaaaattgtaccaaaatagttgttcaaatatcattactc 11404842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 29533863 - 29533921
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaa 62  Q
    |||||||||||||||||| || |||| |||||||| || || ||||||||||| |||||    
T  29533863 attgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaagttgtaccaaaa 29533921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 33074972 - 33075050
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    |||| |||||||||||||| ||||||||| |||||||| || || |||| ||||||  |||| ||||||  ||||||||    
T  33074972 tccaatgtttttgaccaataaaaaaagagaacaacaaagttgtctcaaaggttgtactaaaatagttgtcaaaatatca 33075050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 45966715 - 45966793
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 82  Q
    |||||||||||||||| | || | |  ||||||||| | |||||||||||| | ||||| | |||||||||||||||||    
T  45966715 attgtttttgaccaataagaatataaaacaacaaaactgtcccaaaagttgaaccaaaatatttgttcaaatatcatta 45966793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 11173551 - 11173635
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||||||| |||| | ||  || || || ||||||||||| | |||  ||||||||||||| ||||||||||    
T  11173551 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatc-aaatggttgttcaaatattattactcttt 11173635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 25806493 - 25806456
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaatt 41  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  25806493 attgtttttgaccaataaaaaaagagaacaacaaaatt 25806456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 31300904 - 31300985
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | |||| || |||||||| || |||||| | ||||   ||||  |||||||||||||||||||||    
T  31300904 attgtttttgaccaataacaaaaaagaacaacaaagttgtcccaagaattgtcataaaatggttgttcaaatatcattactc 31300985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 55467819 - 55467848
Alignment:
Q  58 caaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||||||||||||||||||||    
T  55467819 caaaaaagttgttcaaatatcattactctt 55467848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29706002 - 29706085
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||| ||||||||||| |||| | ||  || || || ||||||||||| | ||| |||||||||||||||| |||||    
T  29706002 tccattgttttttaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatc-aaatagttgttcaaatatcactactc 29706085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44695110 - 44695166
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaaca-aaattatcccaaaagttgta 56  Q
    |||||||||||| |||||||||||||||| | || | |||||||| |||||||||||    
T  44695110 tccattgtttttaaccaatgaaaaaagagaaaaaaataaattatcacaaaagttgta 44695166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 47140645 - 47140561
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||  |||||||| |||| |||||||| || || ||||||||||| |||||  ||| |  ||||||||||| ||||    
T  47140645 cattgtttttgataaatgaaaatagagaacaacaaagttgtctcaaaagttgtaccaaaatggttctcaaaatatcattattctt 47140561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 48649680 - 48649708
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagag 29  Q
    |||||||||||||||||||||||||||||    
T  48649680 tccattgtttttgaccaatgaaaaaagag 48649708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 49361809 - 49361725
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||| ||||||||||| || | || | |||||| || || |||||||||||  |||| ||||||||||||| || |||||    
T  49361809 tccattgttattgaccaatgagaagaaagaataacaaagttgtcacaaaagttgtactaaaagagttgttcaaataacactactc 49361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9395309 - 9395224
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9395309 tccattgtttttgaccaatgataagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 9395224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10557508 - 10557593
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||||||||| |||| ||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  10557508 tccattgtttttgaccaatgaaaagagagtacaacaagattgttccaaaagttgtagcaaaaaagttgttcaaatatcattactct 10557593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 32135406 - 32135325
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  32135406 attgtttttgaccaatgaaaagagagcacaacaagattgtcctaaaagttgtagcaaaaaagttgttcaaatatcattactc 32135325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6997522 - 6997437
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||| |||||||||||||||||| ||||||||||||  || |||||||||||||||||||||| |||||||||||||||||||||    
T  6997522 tccatcgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaaattgttcaaatatcattactct 6997437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19713093 - 19713180
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||| ||||||||||| ||||||||||||  || ||||||||||||| | ||||||||||||||||||||||||||||||    
T  19713093 tccattgttttttaccaatgaaaagagagcacaacaaggttgtcccaaaagttgttgtaaaaaagttgttcaaatatcattactcttt 19713180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 16121253 - 16121336
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||| |||||||||||| |||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  16121253 cattatttttgaccaataaaaagatagcacaacaaaattgtcccaaaagttatagcaaaaaagttgttcaaatatcagtactct 16121336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 16865630 - 16865712
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||| ||||||||||||||||| ||||||||||||| || ||| | | |||||||||||||| ||||||||||||||||||||    
T  16865630 cattatttttgaccaatgaaaagagagcacaacaaagttgtcctatatgttgtagcaaaaaaattgttcaaatatcattactc 16865712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2165272 - 2165188
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||||| |||||||| |||  || || ||||||||||||||||||| ||||| ||||||| ||||||    
T  2165272 tccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaaaaattgtttaaatatctttactc 2165188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2176905 - 2176821
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||||| |||||||| |||  || || ||||||||||||||||||| ||||| ||||||| ||||||    
T  2176905 tccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaaaaattgtttaaatatctttactc 2176821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 608633 - 608546
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||||||||||||||| || |||| |||||||  || |||||| ||||||| ||||| |||||||||||||||||| ||||||    
T  608633 tccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaacagttgtaccaaaatagttgttcaaatatcattgctcttt 608546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22422249 - 22422335
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||||| ||||| || |||| |||||||| || | |||||||||||| ||||| | ||||||||||||||||||||||    
T  22422249 tccattgtttttgactaatgagaagagagaacaacaaagttgtaccaaaagttgtaccaaaataattgttcaaatatcattactctt 22422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 34792108 - 34792190
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||| |||||||| ||||||||  || ||||||||||| || ||||| |||||||||||||||| ||||||    
T  34792108 attgtttttgaccaataaaaaaagaacacaacaaggttgtcccaaaagttataccaaaagagttgttcaaatatcactactct 34792190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 17442924 - 17443008
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||||| |||| | || ||| ||||| ||  || |||||||||||||| ||||| ||||||||||| |||| ||||||||    
T  17442924 attgtttttgatcaataagaagagaacacaataaggttgtcccaaaagttgtaccaaaagagttgttcaaaaatcactactcttt 17443008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 32253879 - 32253966
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagag-cacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||| ||||||||||| ||||  | || |||||| || ||||||||||| | ||| |||||||||||||||| ||||||||    
T  32253879 tccattgtttttaaccaatgaaaagagagagaaaaaaaaattgtcacaaaagttgta-ccaaatagttgttcaaatatcactactcttt 32253966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 7304074 - 7303999
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    |||||||||||||||||| || |||| ||||  |  || || ||||||||||| ||||| ||||||||||||||||    
T  7304074 attgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatca 7303999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 12151794 - 12151758
Alignment:
Q  48 aaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  12151794 aaagttgtaccaaaatagttgttcaaatatcattact 12151758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 32457224 - 32457196
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagag 29  Q
    |||||||||||||||||||||||||||||    
T  32457224 tccattgtttttgaccaatgaaaaaagag 32457196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22893967 - 22894051
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  22893967 tccattgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 22894051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22945635 - 22945719
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  22945635 tccattgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 22945719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4878066 - 4878153
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4878066 tccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattgctcttt 4878153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24310493 - 24310406
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||||||||| ||| |||||||||||||||||  || |||||||||||||||||||||| |||||||||||||||||||||||    
T  24310493 tccattgtttttgactaataaaaaaagagcacaacaaggttgtcccaaaagttgtagcaaaaaaattgttcaaatatcattactcttt 24310406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 53781809 - 53781724
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||||||||| |||||| |||||  || ||||||||||||||||| |||||||||| |||||||||||||||    
T  53781809 tccattgtttttgaccaatgaaaagagagcataacaaggttgtcccaaaagttgtagcacaaaagttgttgaaatatcattactct 53781724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 1868863 - 1868779
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||| ||||| |||||| |||||||||||||||||  || ||||||||||||||| |||||||||||||||||||||||||||||    
T  1868863 cattatttttaaccaataaaaaaagagcacaacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaatatcattactctt 1868779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8487734 - 8487821
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||| |||||||||||| |||| ||||||||||||  || || ||||||||||||||||||| |||||||||||||||||||||||    
T  8487734 tccattatttttgaccaataaaaagagagcacaacaaggttgtctcaaaagttgtagcaaaaaaattgttcaaatatcattactcttt 8487821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 4577670 - 4577749
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||| ||||||||||| ||||||||||||  || |||||||||||||||| |||||||||||||||||||||||||||||    
T  4577670 ttttttaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagc-aaaaagttgttcaaatatcattactcttt 4577749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 31413758 - 31413674
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||| |||||||||||| |||| ||||||||||||  || || ||||| ||||||||||||||||||||||||||||||||||    
T  31413758 tccattatttttgaccaataaaaagagagcacaacaaggttgtcacaaaacttgtagcaaaaaagttgttcaaatatcattactc 31413674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 45678362 - 45678446
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||| |||| |||| |||||||  || | |||||||||||| ||||| ||||||||||||||||||||||    
T  45678362 tccattgtttttgaccaataaaaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 45678446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 48760392 - 48760467
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    ||||||||||||||||| | ||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||    
T  48760392 tttttgaccaatgaaaagaaagcacaa-aagattgttccaaaagttgtagcaaaaaagttgttcaaatatcattact 48760467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 33776995 - 33777074
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 82  Q
    ||||||||||||||||| |||| |||| |||||||  ||||||||||| ||||| ||||| |||||||||||||||||||    
T  33776995 cattgtttttgaccaataaaaagagagaacaacaaggttatcccaaaaattgtaccaaaatagttgttcaaatatcatta 33777074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6256421 - 6256334
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||| |||||||||||| ||| ||||||| | |||||| || || ||||| | || ||||||||||||||||||||    
T  6256421 tccattgtttttgaccgatgaaaaaagagaacagcaaaattgttccaaaaattataccaaaataattattcaaatatcattactcttt 6256334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9096036 - 9096122
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||||||||||||| |||||| || |||||||  || | |||||||||||| ||||| | |||||||||||||||||||||||    
T  9096036 tccattgtttttgaccaataaaaaaa-agaacaacaaggttgtaccaaaagttgtatcaaaataattgttcaaatatcattactcttt 9096122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 50291384 - 50291469
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctttg 89  Q
    |||||||||||||||| | || ||| ||||||||  || |||||||||||||| ||||| ||||||||||||| || |||||||||    
T  50291384 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaataacactactctttg 50291469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43982996 - 43983076
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatt 81  Q
    ||||||||||||||||||||| || |||| ||||| | ||| ||| |||||||||| |||||  |||||||||||||||||    
T  43982996 tccattgtttttgaccaatgagaagagagaacaactagattgtcctaaaagttgtaccaaaatggttgttcaaatatcatt 43983076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 51107414 - 51107334
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatt 81  Q
    |||||||||||||||||||||||| ||||||| ||||  || | |||||| || |||||| ||||||||| ||||||||||    
T  51107414 tccattgtttttgaccaatgaaaagagagcacgacaaggttgttccaaaaattatagcaagaaagttgttaaaatatcatt 51107334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 43307333 - 43307256
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 82  Q
    ||||||||| |||||| |||| ||||||||||||  ||||||||||| |||||  ||||||||||||||||||| ||||    
T  43307333 attgtttttaaccaataaaaagagagcacaacaaggttatcccaaaaattgta-aaaaaaagttgttcaaatataatta 43307256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 36110240 - 36110321
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctttg 89  Q
    |||||||||||| | || ||| ||||||||  || |||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  36110240 tttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtatcaaaagagttgttcaaatatcactactctttg 36110321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 38960625 - 38960548
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||| | || ||| |||||||| ||| |||||||| ||||| ||||| |||||||||||||||| |||||    
T  38960625 tttttgaccaataagaagagaacacaacaagattgtcccaaaaattgtatcaaaagagttgttcaaatatcactactc 38960548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 56264843 - 56264756
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaa---ttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||| ||| |||| |||| ||||||| |   ||||  ||||||||||||||||||| ||||||||||| ||||||||||    
T  56264843 cattgtttttgacgaataaaaagagagtacaacaacaaagttatttcaaaagttgtagcaaaaaaattgttcaaataacattactctt 56264756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 18944389 - 18944469
Alignment:
Q  6 tgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||| | || ||| ||||| ||  || |||||||||||||| ||||| |||||||||||||||| ||||||    
T  18944389 tgtttttgaccaataagaagagaacacaataaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactct 18944469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29577408 - 29577324
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||||| |||| |||||||  || |||||||| |||||  |||  || ||||||||||| |||||||    
T  29577408 tccattgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaaattgtacaaaagtagatgttcaaatataattactc 29577324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 38952788 - 38952871
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||||||||||||| | ||  |||||||| ||||| ||||| |||| || ||||| |||||||| |||||    
T  38952788 tccattgtttttgaccaatgaaaaaagagaaaaaagaaattatcacaaaaattgtatcaaataa-ttgtttaaatatcactactc 38952871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 8614284 - 8614367
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||| | || | | ||||||||  || |||||||| |||||  ||||||||||||||||||||| |||||||    
T  8614284 attgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgtacaaaaaaagttgttcaaatatcactactctt 8614367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 32294721 - 32294638
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||| ||| | |||||| ||||||||  || |||||||| || || ||||| |||||||||||||||| |||||||    
T  32294721 attgtttttgacgaataagaaaagaacacaacaaggttgtcccaaaaattataccaaaagagttgttcaaatatcactactctt 32294638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1987685 - 1987624
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaa 62  Q
    |||||||||||||||||||||||| |||| |||||||| || || |||| |||||| |||||    
T  1987685 tccattgtttttgaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaa 1987624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 31275245 - 31275329
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||||||||| |||| | ||  ||||| || ||||||||||| | |||  ||||||||||||||| ||||||    
T  31275245 tccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatc-aaatggttgttcaaatatcactactct 31275329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5234443 - 5234360
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||| |||| |||| | || |||||| || ||||||||||| | |||  ||||||||||||||| |||||    
T  5234443 tccattgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatc-aaatggttgttcaaatatcactactc 5234360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 21766649 - 21766724
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    ||||||||| |||||| | || ||| ||||||||  || ||||||||||| || ||||| ||||||||||||||||    
T  21766649 attgtttttaaccaataagaagagaacacaacaaggttgtcccaaaagttataccaaaagagttgttcaaatatca 21766724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 36848379 - 36848340
Alignment:
Q  46 caaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  36848379 caaaagttgtatcaaaagagttgttcaaatatcattactc 36848340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 46309092 - 46309009
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||||||||||| |||| || ||||| || || |||| |||||| |||||  |||||  |||||||| |||||||    
T  46309092 attgtttttgaccaatgaaaagagagaactacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactctt 46309009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 46355260 - 46355177
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||| ||||||||||| ||||||| | | |||| || ||||||||||||||  |||| ||||||||||| | || |||||||    
T  46355260 attgttattgaccaatgagaaaagagaataccaaagttgtcccaaaagttgtacaaaaagagttgttcaaacaacactactctt 46355177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47998693 - 47998778
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||||||||| | || | || ||| ||||| ||||||||||| ||||  | |||||||||||||| ||||||||    
T  47998693 tccattgtttttgaccaatgaaaagaaag-aaaaaaaagttatcacaaaagttgtatcaaatga-ttgttcaaatatcactactcttt 47998778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 46799862 - 46799940
Alignment:
Q  9 ttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||| || |||| |||||||  || |||||||| ||||| |||||   |||||||||||||||| |||||    
T  46799862 ttttgaccaatgagaatagagaacaacaaggttgtcccaaaaattgtaccaaaatgattgttcaaatatcattgctctt 46799940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 36947061 - 36946980
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||| |||| |||| |||| |||||||||||||| ||||| || || |||||  |||||  |||||||| |||||    
T  36947061 attgtttttgatcaataaaaagagagaacaacaaaattatctcaaaaattatatcaaaatggttgtcaaaatatcactactc 36946980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 29384169 - 29384141
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagag 29  Q
    |||||||||||||||||||||||||||||    
T  29384169 tccattgtttttgaccaatgaaaaaagag 29384141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 36444367 - 36444339
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagag 29  Q
    |||||||||||||||||||||||||||||    
T  36444367 tccattgtttttgaccaatgaaaaaagag 36444339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 42915188 - 42915105
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||| ||||||||||| |||| | ||  || || || ||||||||||| |||| | ||||||||||||||| ||||||||    
T  42915188 attgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaata-gttgttcaaatatcactactcttt 42915105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44539393 - 44539433
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaatt 41  Q
    ||||||||||||||||||| |||| ||||||||| ||||||    
T  44539393 tccattgtttttgaccaataaaaagagagcacaataaaatt 44539433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 44539432 - 44539464
Alignment:
Q  52 ttgtagcaaaaaagttgttcaaatatcattact 84  Q
    |||||| ||||||||||||||||||||||||||    
T  44539432 ttgtaggaaaaaagttgttcaaatatcattact 44539464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3042 - 3128
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| ||||    
T  3042 tccattgtttttgaccaatgaaaagagagcacaataaagttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattattctt 3128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 6e-30; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38197760 - 38197842
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattac 83  Q
    |||||||||||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  38197760 tccattgtttttgaccaatgaaaagatagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattac 38197842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37848592 - 37848507
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  37848592 tccattgtttttgaccaatgaaaagagagcacaacaaggttatcctaaaagttgtagcaaaaaagttgttcaaatataattactct 37848507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22331183 - 22331097
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||| ||||||||||| |||||| |||||  || |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  22331183 tccattgttttttaccaatgaaaagagagcataacaaggttgtcccaaaaattgtagcaaaaaaattgttcaaataacattactctt 22331097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 23034282 - 23034201
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | |||||||||||||||  || |||||||||||||| ||||| |||||||||||||||| |||||    
T  23034282 attgtttttgaccaataagaaaagagcacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 17039258 - 17039340
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||| ||| ||||||||  || |||||||| || |||||||||| ||||||||||||| ||||||    
T  17039258 cattgtttttgaccaatgaaaagagaacacaacaaggttgtcccaaaaattatagcaaaaaaattgttcaaatatcgttactc 17039340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 27704537 - 27704612
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    |||||||||||||||| | || ||| ||||||||| || |||||||||||||| ||||| ||||||||||||||||    
T  27704537 attgtttttgaccaataagaagagaacacaacaaagttgtcccaaaagttgtaacaaaagagttgttcaaatatca 27704612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 1709386 - 1709467
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| |||| ||| |||||||| ||| |||||||| || || ||||| |||||||||||||||| |||||    
T  1709386 attgtttttgaccaataaaaagagaacacaacaagattgtcccaaaaattataccaaaagagttgttcaaatatcactactc 1709467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 47945089 - 47945169
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||| | || ||| ||||||||  || |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  47945089 tttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactcttt 47945169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 47950519 - 47950599
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||| | || ||| ||||||||  || |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  47950519 tttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactcttt 47950599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 7295569 - 7295651
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||| || |||| | |||||  || | |||||||||||  |||||||||||| ||||||||||||||||    
T  7295569 attgtttttgaccaatgagaagagagaataacaaggttgttccaaaagttgtctcaaaaaagttgtacaaatatcattactct 7295651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 24380690 - 24380609
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || ||| ||||||||  || | |||||||||||| ||||| |||||||||||||||| |||||    
T  24380690 attgtttttgaccaataagaagagaacacaacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatcactactc 24380609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 29923773 - 29923853
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | |||||| ||||||||  || ||| |||||||||| ||||| |||||||||||||||| |||||    
T  29923773 attgtttttgaccaataagaaaagaacacaacaaggttgtcc-aaaagttgtaccaaaagagttgttcaaatatcactactc 29923853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2600506 - 2600420
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||||||||||| || |||| |||||||| || || |||| |||||| |||||  |||||  |||||||| |||||||    
T  2600506 tccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactctt 2600420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 2980662 - 2980620
Alignment:
Q  40 ttatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 82  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  2980662 ttatcccaaaagttatatcaaaaaagttgttcaaatatcatta 2980620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 40207774 - 40207724
Alignment:
Q  30 cacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcat 80  Q
    |||||||||||| |||||||||||||| ||||||| || ||||||||||||    
T  40207774 cacaacaaaattgtcccaaaagttgtaccaaaaaaattattcaaatatcat 40207724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 11788417 - 11788376
Alignment:
Q  44 cccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  11788417 cccaaaagttgtatcaaaatagttgttcaaatatcattactc 11788376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 37970035 - 37970116
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||| || |||| |||||||| || || |||| |||||| |||||  |||||| |||||||| |||||    
T  37970035 attgtttttgaccaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatggttgttaaaatatcactactc 37970116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 41910154 - 41910073
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || ||| ||||||||  || ||| |||||||||| ||||| | |||||||||||||| |||||    
T  41910154 attgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaagaattgttcaaatatcactactc 41910073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 45335969 - 45336046
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||| |||| |||| |||||||  || |||||||| ||||| ||||| ||| |||||||||||| |||||    
T  45335969 tttttgaccaataaaaagagagaacaacaaggttgtcccaaaatttgtaccaaaagagtagttcaaatatcactactc 45336046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 48639354 - 48639273
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||   || ||| ||||||||  || | |||||||||||| ||||| |||||||||||||||| |||||    
T  48639354 attgtttttgaccaatacgaagagaacacaacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatcactactc 48639273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 41538582 - 41538662
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    |||||||||||||||| | || | | ||||||||  || |||||||||||||| ||||| | |||||||||||||| ||||    
T  41538582 attgtttttgaccaataagaagataacacaacaaggttgtcccaaaagttgtatcaaaagaattgttcaaatatcactact 41538662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 41458870 - 41458811
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaa 62  Q
    ||||| |||||| |||||||||||||| |||||||| || || ||||||||||| |||||    
T  41458870 cattgattttgatcaatgaaaaaagagaacaacaaagttgtctcaaaagttgtaccaaaa 41458811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 44185278 - 44185353
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    |||||||||||||||||| || |||| ||||  |  || || ||||||||||| ||||| ||||||||||||||||    
T  44185278 attgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatca 44185353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 6353829 - 6353912
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaaca-aaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||| |||||||||||||||| | || | ||||| || ||||||||||| | ||| |||| ||||||||||| ||||||    
T  6353829 cattgtttttaaccaatgaaaaaagagaaaaaaagaaattgtcacaaaagttgtatc-aaatagtttttcaaatatcactactct 6353912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 32315928 - 32316008
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    |||||||||||||||| | || |||| | |||||  || || |||||||||| |  ||| |||||||||||||||||||||    
T  32315928 attgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaatatcattact 32316008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 6e-27; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35595958 - 35595877
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 82  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||  ||||||||||||||||||||||||    
T  35595958 tccattgtttttgaccaatgaaaaaagagcacaacaagattgtcccaaaaattgtaataaaaaagttgttcaaatatcatta 35595877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6458866 - 6458950
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||| |||| ||||||||||||  || |||||||| || |||||||||||||||||||||||||||||||    
T  6458866 tccattgtttttgaccaattaaaagagagcacaacaaggttgtcccaaaaattatagcaaaaaagttgttcaaatatcattactc 6458950  T

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Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14522936 - 14522856
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatt 81  Q
    ||||||||||||||||||| |||| | ||||||| || ||| |||||||||||||||||||||||||||||||||| ||||    
T  14522936 tccattgtttttgaccaataaaaagatagcacaataagattgtcccaaaagttgtagcaaaaaagttgttcaaataacatt 14522856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33893685 - 33893772
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||||||||| |||||||| | ||||||||||  || ||||||||||||||| |||||| |||||||||||||||| ||||||    
T  33893685 tccattgtttttgacaaatgaaaagatagcacaacaaggttgtcccaaaagttgtagtaaaaaaattgttcaaatatcattgctcttt 33893772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 42364531 - 42364613
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||||||||||||||| | | ||||||||  || ||||||||||||| | ||||||||||||||||||||||||||||    
T  42364531 attgtttttgaccaatgaaaagataacacaacaaggttgtcccaaaagttgttggaaaaaagttgttcaaatatcattactct 42364613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 12612989 - 12612906
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    ||||||||||||||||||||| || |||| |||||||  || |||||||||||||| |||||  ||||||||||||||||||||    
T  12612989 tccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatcattact 12612906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17574196 - 17574109
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    ||||||||||||||||| ||| || | || |||||||  || |||||||||||||| ||||| |||||||||||||||||||||||||    
T  17574196 tccattgtttttgaccagtgagaagaaagaacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactcttt 17574109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 9940156 - 9940238
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||||||||||||||| |||| |||||||| || ||| |||| ||||| ||||| |||| ||||||||||||||||||    
T  9940156 attgtttttgaccaatgaaaagagagaacaacaaagttgtcctaaaaattgtatcaaaatagttattcaaatatcattactct 9940238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29765930 - 29766015
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||||||||| |||||| |||||||| ||||| |||| |||||| ||||| ||||||  |||||||| ||||||    
T  29765930 tccattgtttttgaccaatgaataaagagaacaacaaagttatctcaaaggttgtaccaaaatagttgtcaaaatatcactactct 29766015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 43153032 - 43152951
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 82  Q
    ||||||||||||||||||||| || |||| |||||||| || ||| || ||||||| ||||| |||||||||||||||||||    
T  43153032 tccattgtttttgaccaatgagaagagagaacaacaaagttgtcctaagagttgtaccaaaatagttgttcaaatatcatta 43152951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 37821110 - 37821027
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    |||||||||||||||| | || ||| ||||||||  || |||||||||||||| ||||| |||||||||||||||| |||||||    
T  37821110 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcactactctt 37821027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 18729246 - 18729164
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||||| |||| ||| ||||||||  || |||||||||||||| ||||| |||||||||||||| | ||||||    
T  18729246 attgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatattactactct 18729164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 25585425 - 25585343
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    ||||||||||| |||| |||| | | ||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||||    
T  25585425 attgtttttgatcaataaaaagataacacaacaaagttctcccaaaagttgtaacaaaatagttgttcaaatattattactct 25585343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 8442261 - 8442341
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 84  Q
    ||||||| |||||||||| || |||| ||||||||||| | |||||| || || ||||| |||||||||||||||||||||    
T  8442261 attgtttctgaccaatgagaagagagaacaacaaaattgttccaaaaattataccaaaatagttgttcaaatatcattact 8442341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 3031935 - 3032018
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagc-aaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||| | ||||||||||  || | |||||| || |||| ||||||||| |||||||||||||||||    
T  3031935 cattgtttttgaccaatgaaaagatagcacaacaaggttgtaccaaaaattatagcaaaaaaagttcttcaaatatcattactc 3032018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 3849600 - 3849684
Alignment:
Q  3 cattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||| | ||||||||| | ||||||||||  || || |||||||||||||||||||| |||||| |||||| ||||||||    
T  3849600 cattgttttt-atcaatgaaaagatagcacaacaaggttgtctcaaaagttgtagcaaaaaagatgttcatatatcactactcttt 3849684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 12203247 - 12203328
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||| |||| |||||||| || |||| ||||||| ||| || ||||||||||| ||||| |||||||||||||| |||||||    
T  12203247 attggttttaaccaatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaagagttgttcaaatattattactc 12203328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 34693185 - 34693104
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || ||| ||||||||  |||||| |||||||||| ||||| |||| ||||||||||| |||||    
T  34693185 attgtttttgaccaataagaagagaacacaacaaggttatcctaaaagttgtatcaaaagagttattcaaatatcactactc 34693104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 39032573 - 39032492
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || ||| ||||||||  || |||||||| ||||| ||||| |||||||||||||||| |||||    
T  39032573 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtatcaaaagagttgttcaaatatcactactc 39032492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 21771438 - 21771358
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||| |||| | | ||||||||  || ||||||||||| || ||||| |||||||||||||||| ||||||||    
T  21771438 tttttgaccaataaaaagataacacaacaaggttgtcccaaaagttataccaaaagagttgttcaaatatcactactcttt 21771358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2117612 - 2117526
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||| |||||||||||||||| | ||  || || || ||||||||||| | ||| |||||||||||||||| ||||||||    
T  2117612 tccattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaagttgtatc-aaatagttgttcaaatatcactactcttt 2117526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 30103419 - 30103339
Alignment:
Q  5 ttgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 87  Q
    ||||||||||||| ||||||||||  ||||||| ||| |||||||| || |   |||| ||||||||||||||||||||||||    
T  30103419 ttgtttttgaccattgaaaaaaga--acaacaagattgtcccaaaaattattttaaaatagttgttcaaatatcattactctt 30103339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12891068 - 12890989
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 86  Q
    |||||||||||||| ||||||||| ||||||||||||  || |||||||| |      ||||||||||||||||||||||| ||||    
T  12891068 tccattgtttttgatcaatgaaaagagagcacaacaaggttgtcccaaaaat------aaaaaagttgttcaaatatcattgctct 12890989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 38919952 - 38920022
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatc 78  Q
    |||||||||||||| || |||| |||||||  || ||| |||||||||| ||||| |||||||||||||||    
T  38919952 tttttgaccaatgagaagagagaacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatc 38920022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 35616770 - 35616689
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || |||| |||||||  || |||||||| || || ||||| |||||||||||||||| |||||    
T  35616770 attgtttttgaccaataagaagagagaacaacaaggttgtcccaaaatttataccaaaatagttgttcaaatatcactactc 35616689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3518282 - 3518366
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    ||||||||||||||||||||| || |||| |||||||| || || |||| |||||| |||||  |||||  |||||||| |||||    
T  3518282 tccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactc 3518366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 39595373 - 39595456
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||||| |||| | ||  || || || ||||||||||| | |||  |||||||||||||||||||||    
T  39595373 tccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatc-aaatggttgttcaaatatcattactc 39595456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 22864349 - 22864270
Alignment:
Q  4 attgtttttgaccaatgaaaaa-agagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 82  Q
    |||||||||||||||  ||||| |||| |||||||  || |||||||| || || ||||| |||||||||||||||||||    
T  22864349 attgtttttgaccaaataaaaagagagaacaacaacgttgtcccaaaaattataacaaaatagttgttcaaatatcatta 22864270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33567211 - 33567125
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||||||||||| |||| | ||  ||||| || ||||||||||| | |||  |||||||| |||||| ||||||||    
T  33567211 tccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatc-aaatggttgttcatatatcactactcttt 33567125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 36899446 - 36899375
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    |||||||| ||| |||| ||| || ||||| ||| | |||||||||||| ||||| ||||||||||||||||    
T  36899446 tttttgactaataaaaagagaacaaaacaagattgttccaaaagttgtaccaaaatagttgttcaaatatca 36899375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 5005215 - 5005273
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaa 62  Q
    |||||||||||||||||| || |||| |||||||| || || ||||||||||| |||||    
T  5005215 attgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 5005273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11878528 - 11878606
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 82  Q
    |||||| ||||||| ||||  ||||||||||||| ||  || |||||||| |||||| ||||||||||||||||||| ||||    
T  11878528 tccattatttttgatcaat--aaaaagagcacaataaggttgtcccaaaaattgtag-aaaaaagttgttcaaatattatta 11878606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 14126516 - 14126597
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || ||| |||| |||  || ||||||||| | || ||||| |||||||||||||||| |||||    
T  14126516 attgtttttgaccaataagaagagaacacatcaaggttgtcccaaaagctctaccaaaagagttgttcaaatatcactactc 14126597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 35924376 - 35924456
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||| ||| |||| |||| |||||||  || || ||||| ||||  ||||| |||||| ||||||||||||||||||    
T  35924376 tttttgacaaataaaaagagagaacaacaaggttgtctcaaaaattgtttcaaaagagttgtacaaatatcattactcttt 35924456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 43214081 - 43214133
Alignment:
Q  36 aaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||| || |||||||||| |||||| || ||||||||||||||| ||||||    
T  43214081 aaaattgtcacaaaagttgttgcaaaatagatgttcaaatatcatttctcttt 43214133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 17137 - 17221
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||||||||||| |||||||| |||  || || ||||||||||||||||||| ||||| ||||||| ||||||    
T  17137 tccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaaaaattgtttaaatatctttactc 17221  T

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Target: scaffold0592 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 1013 - 1095
Alignment:
Q  5 ttgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaata-tcattactct 86  Q
    |||||||||||||||||||| |||| |||||||| ||||| ||||||||||| ||||| ||||||  ||||| ||||||||||    
T  1013 ttgtttttgaccaatgaaaagagagaacaacaaagttatctcaaaagttgtaccaaaatagttgtcaaaatattcattactct 1095  T

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Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 145149 - 145230
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||||||| | || ||| ||||||||  || |||||||||||||| ||||| |||||||||||||||| |||||    
T  145149 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 145230  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 48756 - 48840
Alignment:
Q  4 attgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttt 88  Q
    |||||||||||||||| | || ||| ||||||||  || |||||||| ||||| ||||| | |||||||||||||||||||||||    
T  48756 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtatcaaaagaattgttcaaatatcattactcttt 48840  T

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Target: scaffold0514 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 1812 - 1735
Alignment:
Q  8 tttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 85  Q
    |||||||||||| | || ||| || ||||| ||| |||||||||||||| ||||| |||||||||||||||| |||||    
T  1812 tttttgaccaataagaagagaacataacaagattgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 1735  T

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Target: scaffold0241 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 5392 - 5422
Alignment:
Q  65 gttgttcaaatatcattactctttggattaa 95  Q
    |||||||||||||||||||||||||||||||    
T  5392 gttgttcaaatatcattactctttggattaa 5422  T

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Target: scaffold0172 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 9404 - 9458
Alignment:
Q  35 caaaattatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctttg 89  Q
    ||||||| ||| |||| || || ||||| ||||||||||||||||||||||||||    
T  9404 caaaattgtcctaaaaattataacaaaagagttgttcaaatatcattactctttg 9458  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17302 - 17224
Alignment:
Q  1 tccattgtttttgaccaatgaaaaaagagcacaacaaaattatcccaaaagttgtagcaaaaaagttgttcaaatatca 79  Q
    ||||||||||||||||||| ||||||||| | || ||  |||||  | ||||||| || ||| ||||||||||||||||    
T  17302 tccattgtttttgaccaataaaaaaagagaaaaagaaggttatcatataagttgtcgctaaatagttgttcaaatatca 17224  T

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