View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19874_low_28 (Length: 271)
Name: NF19874_low_28
Description: NF19874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19874_low_28 |
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Alignment Details
Target: chr3 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 48450567 - 48450314
Alignment:
| Q |
1 |
aaattaaaatgaaatcaaggcctgctagtttgaaaaaagtgccagaagtgtatacagttataaaagtgtcatgttgttttcatcatgcttcctacaacca |
100 |
Q |
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| T |
48450567 |
aaattaaaatgaaatcaaggcctgctagtttgaaaaaagtgccagaagtgtatacggttataaaagtgtcatgttgttttcatcatgcttcctacaacca |
48450468 |
T |
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| Q |
101 |
tttctcctacacccaatttgtgactaactaacaaaagtggatgcagttaaaactaacttataacaaacttctaatagcacttctatgcaataactaaatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48450467 |
tttctcctacacccaatttgtgactaactaacaaaagtggatgcagttaaaactaacttataacaaacttctaatagcacttctatgcaataactaaatc |
48450368 |
T |
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| Q |
201 |
aacaattggaaactccacactaaaacaaagacaataaatttaatgagttattaa |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48450367 |
aacaattggaaactccacactaaaacaaagacaataaatttaatgagttattaa |
48450314 |
T |
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