View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19874_low_38 (Length: 239)

Name: NF19874_low_38
Description: NF19874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19874_low_38
NF19874_low_38
[»] chr3 (31 HSPs)
chr3 (1-224)||(3648788-3649011)
chr3 (4-57)||(7601909-7601962)
chr3 (59-119)||(13778552-13778612)
chr3 (4-57)||(10872764-10872817)
chr3 (59-119)||(10811255-10811315)
chr3 (59-119)||(27089864-27089924)
chr3 (6-58)||(38677559-38677611)
chr3 (2-57)||(30197518-30197573)
chr3 (59-114)||(48346946-48347001)
chr3 (4-50)||(45736779-45736825)
chr3 (4-61)||(47334633-47334690)
chr3 (6-57)||(331892-331943)
chr3 (8-59)||(7882274-7882325)
chr3 (6-57)||(8504845-8504896)
chr3 (60-119)||(9753339-9753398)
chr3 (9-59)||(7829140-7829190)
chr3 (7-57)||(9170107-9170157)
chr3 (4-54)||(12744899-12744949)
chr3 (4-57)||(22497043-22497096)
chr3 (6-55)||(30578316-30578365)
chr3 (4-57)||(40202406-40202459)
chr3 (4-53)||(42929005-42929054)
chr3 (28-57)||(42930131-42930160)
chr3 (4-57)||(52215875-52215928)
chr3 (28-60)||(12708796-12708828)
chr3 (6-50)||(35237774-35237818)
chr3 (6-54)||(40639803-40639851)
chr3 (6-58)||(43818856-43818908)
chr3 (6-50)||(43818947-43818991)
chr3 (6-62)||(48191705-48191761)
chr3 (28-60)||(52215996-52216028)
[»] chr8 (19 HSPs)
chr8 (4-57)||(44521340-44521393)
chr8 (6-57)||(13496529-13496580)
chr8 (6-57)||(24287780-24287831)
chr8 (6-57)||(40640273-40640324)
chr8 (6-60)||(2296466-2296520)
chr8 (4-58)||(10117062-10117116)
chr8 (6-59)||(33070158-33070211)
chr8 (6-58)||(33070259-33070311)
chr8 (59-119)||(33604973-33605033)
chr8 (59-119)||(39211161-39211221)
chr8 (4-51)||(33385263-33385310)
chr8 (8-58)||(10934597-10934647)
chr8 (26-60)||(11322675-11322709)
chr8 (4-57)||(3444617-3444670)
chr8 (6-43)||(11335576-11335613)
chr8 (6-51)||(27502902-27502947)
chr8 (4-52)||(7258677-7258725)
chr8 (59-119)||(12284161-12284221)
chr8 (6-58)||(27518409-27518461)
[»] chr7 (16 HSPs)
chr7 (6-57)||(6455544-6455595)
chr7 (4-58)||(45002070-45002124)
chr7 (4-57)||(2943304-2943357)
chr7 (6-59)||(9555354-9555407)
chr7 (4-57)||(21886462-21886515)
chr7 (6-57)||(10095714-10095765)
chr7 (4-58)||(6847270-6847324)
chr7 (28-58)||(21103362-21103392)
chr7 (4-58)||(23797440-23797494)
chr7 (4-54)||(43813123-43813173)
chr7 (6-59)||(5950288-5950341)
chr7 (8-57)||(7295152-7295201)
chr7 (8-57)||(43103067-43103116)
chr7 (5-57)||(31319609-31319661)
chr7 (4-60)||(34840753-34840809)
chr7 (6-58)||(39012970-39013022)
[»] chr1 (18 HSPs)
chr1 (4-55)||(34953988-34954039)
chr1 (4-57)||(6758541-6758594)
chr1 (6-57)||(33939391-33939442)
chr1 (4-58)||(42761447-42761501)
chr1 (6-55)||(3013704-3013753)
chr1 (8-57)||(36486534-36486583)
chr1 (4-57)||(39216098-39216151)
chr1 (4-57)||(46412780-46412833)
chr1 (4-57)||(48083596-48083649)
chr1 (6-50)||(31998283-31998327)
chr1 (6-57)||(9590739-9590790)
chr1 (6-57)||(45115264-45115315)
chr1 (6-57)||(46412698-46412749)
chr1 (6-57)||(49586084-49586135)
chr1 (4-57)||(15351710-15351763)
chr1 (6-59)||(23398412-23398465)
chr1 (4-53)||(39940578-39940627)
chr1 (6-54)||(8338673-8338721)
[»] chr4 (27 HSPs)
chr4 (4-58)||(3511703-3511757)
chr4 (4-59)||(10308228-10308283)
chr4 (6-57)||(14450952-14451003)
chr4 (6-57)||(33376128-33376179)
chr4 (6-57)||(54713093-54713144)
chr4 (4-57)||(19934730-19934783)
chr4 (4-57)||(36072565-36072618)
chr4 (4-57)||(50686097-50686150)
chr4 (59-119)||(37060435-37060495)
chr4 (4-59)||(3669549-3669604)
chr4 (6-57)||(16537259-16537310)
chr4 (4-59)||(26920764-26920819)
chr4 (6-57)||(35151656-35151707)
chr4 (6-57)||(49481875-49481926)
chr4 (6-57)||(53176303-53176354)
chr4 (28-58)||(30869057-30869087)
chr4 (4-58)||(33377507-33377561)
chr4 (59-113)||(56557851-56557905)
chr4 (4-57)||(12672442-12672495)
chr4 (4-57)||(33036956-33037009)
chr4 (4-57)||(38539473-38539526)
chr4 (4-57)||(54164905-54164958)
chr4 (4-57)||(54508164-54508217)
chr4 (25-57)||(4983332-4983364)
chr4 (59-111)||(18518351-18518403)
chr4 (4-60)||(29006827-29006883)
chr4 (8-52)||(38381976-38382020)
[»] chr6 (12 HSPs)
chr6 (6-58)||(31398320-31398372)
chr6 (8-59)||(18097053-18097104)
chr6 (6-57)||(32254915-32254966)
chr6 (4-57)||(11637165-11637218)
chr6 (4-61)||(29418925-29418982)
chr6 (6-60)||(6560751-6560805)
chr6 (4-50)||(30916956-30917002)
chr6 (4-57)||(8449668-8449721)
chr6 (4-57)||(8458472-8458525)
chr6 (4-45)||(13281541-13281582)
chr6 (28-61)||(15517082-15517115)
chr6 (28-57)||(26527185-26527214)
[»] chr5 (14 HSPs)
chr5 (59-119)||(14532624-14532684)
chr5 (59-119)||(29463115-29463175)
chr5 (6-57)||(26141750-26141801)
chr5 (4-57)||(71254-71307)
chr5 (4-57)||(26045260-26045313)
chr5 (4-57)||(33075060-33075113)
chr5 (4-60)||(14772638-14772694)
chr5 (23-58)||(35942066-35942101)
chr5 (6-57)||(43117381-43117432)
chr5 (28-57)||(71377-71406)
chr5 (4-57)||(31691351-31691404)
chr5 (70-119)||(42643116-42643165)
chr5 (6-54)||(7330071-7330119)
chr5 (6-58)||(27314469-27314521)
[»] chr2 (20 HSPs)
chr2 (4-60)||(40204432-40204488)
chr2 (6-57)||(26234118-26234169)
chr2 (8-54)||(32143404-32143450)
chr2 (16-57)||(1961304-1961345)
chr2 (4-57)||(41805269-41805322)
chr2 (59-119)||(38821484-38821544)
chr2 (6-57)||(31102043-31102094)
chr2 (6-57)||(42530586-42530637)
chr2 (7-61)||(31101940-31101994)
chr2 (8-57)||(6074809-6074858)
chr2 (1-58)||(11726490-11726546)
chr2 (26-59)||(13994303-13994336)
chr2 (4-57)||(15446774-15446827)
chr2 (4-45)||(32143498-32143539)
chr2 (28-57)||(32308375-32308404)
chr2 (4-57)||(38181852-38181905)
chr2 (4-45)||(38618487-38618528)
chr2 (28-57)||(44089421-44089450)
chr2 (6-50)||(37182910-37182954)
chr2 (4-60)||(38465881-38465937)
[»] scaffold0631 (1 HSPs)
scaffold0631 (4-57)||(4342-4395)
[»] scaffold0149 (1 HSPs)
scaffold0149 (6-56)||(24700-24750)
[»] scaffold0020 (1 HSPs)
scaffold0020 (6-58)||(139290-139342)


Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 3648788 - 3649011
Alignment:
Q  1 ttgattgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtacttctttgtatgtttaggttgtctcataaatcgtcaacaaaaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  3648788 ttgattgaatgaatgtaaaatataaagttttgcttataatagtgatcagaggatgtacttctttgtatatttaggttgtctcataaatcgtcaacaaaaa 3648887  T
Q  101 tggttgttcaaatatcacttatcttaaatatcnnnnnnncttcgtccattgaatatttttccgtgactcactgagttgggttatgtcattatgttttgta 200  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3648888 tggttgttcaaatatcacttatcttaaatatcaaaaaaacttcgtccattgaatatttttccgtgactcactgagttgggttatgtcattatgttttgta 3648987  T
Q  201 tatttgaaattcatgtgacattta 224  Q
    ||||||||||||||||||||||||    
T  3648988 tatttgaaattcatgtgacattta 3649011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 7601962 - 7601909
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  7601962 attgaatgaatctaaaattcaaagttttgcttataatagtgatcggagggtgta 7601909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 13778552 - 13778612
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||| ||||| |||||||| |||| ||||||||||||||||||||||||| ||||    
T  13778552 ttctttgtatatttagattgtctcacaaattgtcaacaaaaatggttgttcaaataacact 13778612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 10872764 - 10872817
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||| |||||||||||||||||| |||||||||||    
T  10872764 attgaatgaatctaaaatataaatttttgcttataatagtgaccggagggtgta 10872817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 10811255 - 10811315
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||| ||||||||||| || || | ||||||||||||||||||||||||| ||||    
T  10811255 ttctttgtatatttaggttgtcccaaaagttgtcaacaaaaatggttgttcaaataacact 10811315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 27089924 - 27089864
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||| ||||| ||||| || |||| ||||||||||||||||||||||||| ||||    
T  27089924 ttctttgtatatttagattgtcccagaaattgtcaacaaaaatggttgttcaaataacact 27089864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 38677611 - 38677559
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||| |||||| |||| |||||||||||||||||| ||||||||||||    
T  38677611 tgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgtac 38677559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 30197518 - 30197573
Alignment:
Q  2 tgattgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||||| |||||| || | ||||||||||||||||||||| ||||||||    
T  30197518 tgattgaatgaatataaaatatagatttttgcttataatagtgatcgaagggtgta 30197573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 48346946 - 48347001
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaata 114  Q
    |||||||||| ||||||||||| || |||| |||||||||||| ||||||||||||    
T  48346946 ttctttgtatatttaggttgtcccacaaattgtcaacaaaaatagttgttcaaata 48347001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 45736779 - 45736825
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcgga 50  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||||    
T  45736779 attgaatgaatttaaaatataaaattttgcttataatagtgatcgga 45736825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 47334690 - 47334633
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtacttc 61  Q
    ||||||||||| ||||||  |||||||||||||||||| ||| ||||| |||||||||    
T  47334690 attgaatgaatttaaaatacaaagttttgcttataatactgaccggagagtgtacttc 47334633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 331892 - 331943
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| | || |||||||||||||||||| |||||||||||    
T  331892 tgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgta 331943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 7882325 - 7882274
Alignment:
Q  8 aatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtact 59  Q
    ||||||| |||||| | || |||||||||||||||||| |||||||||||||    
T  7882325 aatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgtact 7882274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 8504896 - 8504845
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| || | |||||||||||||||||| |||||||||||    
T  8504896 tgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggtgta 8504845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 9753339 - 9753398
Alignment:
Q  60 tctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    ||||||||| ||||||||||| || || | ||||||||||||| ||||||||||| ||||    
T  9753339 tctttgtatatttaggttgtcccacaagttgtcaacaaaaatgattgttcaaataacact 9753398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 7829140 - 7829190
Alignment:
Q  9 atgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtact 59  Q
    |||||| |||||| | || ||| ||||||||||||||||||||||||||||    
T  7829140 atgaatctaaaatgttaattttagcttataatagtgatcggagggtgtact 7829190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 9170157 - 9170107
Alignment:
Q  7 gaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||||||| |||||| |||  |||||||||||||||||| |||||||||||    
T  9170157 gaatgaatctaaaatgtaattttttgcttataatagtgaccggagggtgta 9170107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 12744949 - 12744899
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggt 54  Q
    ||||||||||| |||||| |||  |||||||||||||||||| ||||||||    
T  12744949 attgaatgaatctaaaatgtaagtttttgcttataatagtgaccggagggt 12744899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 22497043 - 22497096
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| ||||||||||||| || |||||| |||| ||||||    
T  22497043 attgaatgaatctaaaatgtaaagttttgcttttattagtgaccggaaggtgta 22497096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 30578316 - 30578365
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtg 55  Q
    ||||||||| ||||||  ||||||||||||||||||||||  ||||||||    
T  30578316 tgaatgaatctaaaatacaaagttttgcttataatagtgacaggagggtg 30578365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 40202459 - 40202406
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||||||||||| ||||| |||| |||||||||||||||| | | |||||||||    
T  40202459 attgaatgaatgcaaaatgtaaatttttgcttataatagttaccagagggtgta 40202406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 42929054 - 42929005
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggaggg 53  Q
    ||||||||||| |||||| || | |||||||||||||||||| |||||||    
T  42929054 attgaatgaatataaaatttagaattttgcttataatagtgaccggaggg 42929005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 42930131 - 42930160
Alignment:
Q  28 ttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||||||||||||||||||||||    
T  42930131 ttttgcttataatagtgatcggagggtgta 42930160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 52215928 - 52215875
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||| |||||| |||||| |||| |||||||||||||||||| |||||| ||||    
T  52215928 attgcatgaatctaaaatgtaaatttttgcttataatagtgaccggaggatgta 52215875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 12708796 - 12708828
Alignment:
Q  28 ttttgcttataatagtgatcggagggtgtactt 60  Q
    |||||||||||||||||| ||||||||||||||    
T  12708796 ttttgcttataatagtgaccggagggtgtactt 12708828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 35237774 - 35237818
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcgga 50  Q
    ||||||||| |||| | |||| |||||||||||||||||||||||    
T  35237774 tgaatgaatttaaagtataaaattttgcttataatagtgatcgga 35237818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 40639803 - 40639851
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggt 54  Q
    ||||||||| |||||| | || |||||||||||||||||| ||||||||    
T  40639803 tgaatgaatttaaaatgttaatttttgcttataatagtgaccggagggt 40639851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 43818908 - 43818856
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||| ||||||  ||| ||||||||||| |||||| ||||||||||||    
T  43818908 tgaatgaatctaaaatgcaaaattttgcttatagtagtgaccggagggtgtac 43818856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 43818947 - 43818991
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcgga 50  Q
    ||||||||| ||||||  |||||||||||||||||||||| ||||    
T  43818947 tgaatgaatctaaaatgcaaagttttgcttataatagtgaccgga 43818991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 48191761 - 48191705
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtacttct 62  Q
    ||||||||| |||||| | || ||||| |||||||||||| |||||| |||||||||    
T  48191761 tgaatgaatctaaaatgttaatttttgtttataatagtgaccggaggatgtacttct 48191705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 52215996 - 52216028
Alignment:
Q  28 ttttgcttataatagtgatcggagggtgtactt 60  Q
    |||||||||||||||||| ||||||||||||||    
T  52215996 ttttgcttataatagtgaccggagggtgtactt 52216028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 44521340 - 44521393
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  44521340 attgaatgaatctaaaattcaaagttttgcttataatagtgatcggagggtgta 44521393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 13496529 - 13496580
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| |||| |||||||||||||||||| |||||||||||    
T  13496529 tgaatgaatttaaaatgtaaatttttgcttataatagtgaccggagggtgta 13496580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 24287831 - 24287780
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| ||||||  |||||||||||||||||||||| |||||||||||    
T  24287831 tgaatgaatctaaaatgcaaagttttgcttataatagtgaccggagggtgta 24287780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 40640324 - 40640273
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| ||||||  |||||||||||||||||||||| |||||||||||    
T  40640324 tgaatgaatctaaaatacaaagttttgcttataatagtgaccggagggtgta 40640273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 2296520 - 2296466
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtactt 60  Q
    ||||||||| |||||| |||| |||||||||||||| |||||||||| |||||||    
T  2296520 tgaatgaatctaaaatgtaaaattttgcttataataatgatcggaggatgtactt 2296466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 10117062 - 10117116
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||||| |||||| |||| |||||||||||||||||| |||| |||||||    
T  10117062 attgaatgaatctaaaatgtaaatttttgcttataatagtgaccggatggtgtac 10117116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 33070211 - 33070158
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtact 59  Q
    ||||||||| ||||||  |||||||||||||||| ||||| |||||||||||||    
T  33070211 tgaatgaatctaaaatacaaagttttgcttataacagtgaccggagggtgtact 33070158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 33070259 - 33070311
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||| ||||||  ||| |||||||||||||||||| ||||||||||||    
T  33070259 tgaatgaatctaaaatgcaaaattttgcttataatagtgaccggagggtgtac 33070311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 33605033 - 33604973
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||| ||||||||||| || |||| ||||||||||||  ||||||||||| ||||    
T  33605033 ttctttgtatatttaggttgtcccaaaaattgtcaacaaaaataattgttcaaataacact 33604973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 39211161 - 39211221
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||| ||||| |||||||| || | ||||||||||||| ||||||||||| ||||    
T  39211161 ttctttgtatatttagattgtctcacaagttgtcaacaaaaatgattgttcaaataacact 39211221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 33385263 - 33385310
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggag 51  Q
    ||||||||||| |||||| ||| ||||||||||||||| |||||||||    
T  33385263 attgaatgaatctaaaatgtaaggttttgcttataatattgatcggag 33385310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 10934647 - 10934597
Alignment:
Q  8 aatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    |||||||||||||| ||   |||||||||||||||||| ||||||||||||    
T  10934647 aatgaatgtaaaatatagttttttgcttataatagtgaccggagggtgtac 10934597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 11322675 - 11322709
Alignment:
Q  26 agttttgcttataatagtgatcggagggtgtactt 60  Q
    |||||||||||||||||||||||||||| ||||||    
T  11322675 agttttgcttataatagtgatcggagggagtactt 11322709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 3444670 - 3444617
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||| ||||| |||||||||||||| || ||||||    
T  3444670 attgaatgaatataaaatgtaaatttttgtttataatagtgatctgaaggtgta 3444617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 11335613 - 11335576
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagt 43  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  11335613 tgaatgaatctaaaatgtaaagttttgcttataatagt 11335576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 27502947 - 27502902
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggag 51  Q
    ||||||||| |||||| | || ||||||||||||||||||||||||    
T  27502947 tgaatgaatttaaaatgttaatttttgcttataatagtgatcggag 27502902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 7258677 - 7258725
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagg 52  Q
    ||||||||||| |||||| |||| |||| ||||||||||||| ||||||    
T  7258677 attgaatgaatctaaaatgtaaaattttacttataatagtgaccggagg 7258725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 12284221 - 12284161
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||| |||| | |||| || || | ||||||||||||||||||||||||| ||||    
T  12284221 ttctttgtatatttaagctgtcccacaagttgtcaacaaaaatggttgttcaaataacact 12284161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 27518409 - 27518461
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||| |||||| || | ||||| |||||||||||| ||||||||||||    
T  27518409 tgaatgaatctaaaatgtagatttttgtttataatagtgaccggagggtgtac 27518461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 6455595 - 6455544
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  6455595 tgaatgaatctaaaatgtaaatttttgcttataatagtgatcggagggtgta 6455544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 45002124 - 45002070
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||||| |||||| |||||||||| ||||||||||||  |||||||||||    
T  45002124 attgaatgaatttaaaatgtaaagttttgtttataatagtgactggagggtgtac 45002070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 2943304 - 2943357
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||||||||||||||||| |||  |||||||||||||||||| |||| ||||||    
T  2943304 attgaatgaatgtaaaatataattttttgcttataatagtgaccggaaggtgta 2943357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 9555354 - 9555407
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtact 59  Q
    ||||||||| |||||| ||||||||||||||||||| ||| ||||| |||||||    
T  9555354 tgaatgaatctaaaatgtaaagttttgcttataataatgaccggagtgtgtact 9555407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 21886515 - 21886462
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||| |||||||||||||| ||| |||||||||||    
T  21886515 attgaatgaatctaaaatataaatttttgcttataataatgaccggagggtgta 21886462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 10095765 - 10095714
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| | || |||||||||||||||||| |||||||||||    
T  10095765 tgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgta 10095714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 6847324 - 6847270
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||| ||| ||||||  ||| ||||||||||||||||||||||| |||||||    
T  6847324 attgaataaatataaaatgcaaatttttgcttataatagtgatcggaaggtgtac 6847270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 21103362 - 21103392
Alignment:
Q  28 ttttgcttataatagtgatcggagggtgtac 58  Q
    |||||||||||||||||||||||||||||||    
T  21103362 ttttgcttataatagtgatcggagggtgtac 21103392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 23797440 - 23797494
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||||| ||||||  ||| |||| ||||||||||||| ||||||||||||    
T  23797440 attgaatgaatctaaaatgcaaaattttacttataatagtgaccggagggtgtac 23797494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 43813173 - 43813123
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggt 54  Q
    ||||||||||| |||||  |||| |||||||||||||||||| ||||||||    
T  43813173 attgaatgaatctaaaaattaaatttttgcttataatagtgaccggagggt 43813123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 5950288 - 5950341
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtact 59  Q
    ||||||||| |||||| | |  |||||||||||||||||| |||||||||||||    
T  5950288 tgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtgtact 5950341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 7295152 - 7295201
Alignment:
Q  8 aatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||||||||||||| | || ||||| |||||||| |||||||||||||||    
T  7295152 aatgaatgtaaaatgttaatttttgtttataataatgatcggagggtgta 7295201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 43103116 - 43103067
Alignment:
Q  8 aatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||| |||||| | || |||||||||||||||||| |||||||||||    
T  43103116 aatgaatttaaaatgttaatttttgcttataatagtgaccggagggtgta 43103067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 31319609 - 31319661
Alignment:
Q  5 ttgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||||||||| |||||  || | |||| |||||||||||||||||||||||||    
T  31319609 ttgaatgaatctaaaaaatatatttttccttataatagtgatcggagggtgta 31319661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 34840753 - 34840809
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtactt 60  Q
    ||||||||||  |||||| | || ||||||||||||||||||||||| || ||||||    
T  34840753 attgaatgaacctaaaatgtcaacttttgcttataatagtgatcggaaggagtactt 34840809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 39013022 - 39012970
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||| |||||| | || |||||||||||||||| |||||| |||||||    
T  39013022 tgaatgaatttaaaatattaatttttgcttataatagtaatcggatggtgtac 39012970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 34953988 - 34954039
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtg 55  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  34953988 attgaatgaatctaaaatataaatttttgcttataatagtgatcggagggtg 34954039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 6758594 - 6758541
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||||||||||  |||||||||||||||||||||| |||||| ||||    
T  6758594 attgaatgaatgtaaaatgcaaagttttgcttataatagtgaccggaggatgta 6758541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 33939391 - 33939442
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| |||| |||||||||||||||||| |||||||||||    
T  33939391 tgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgta 33939442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 42761501 - 42761447
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| |||| |||||||    
T  42761501 attgaatgaatctaaaatgtaaagttttgcttataataatgaccggaaggtgtac 42761447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 3013704 - 3013753
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtg 55  Q
    |||||||||||||||| | || |||||||||||||||||| |||||||||    
T  3013704 tgaatgaatgtaaaatgttaatttttgcttataatagtgaccggagggtg 3013753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 36486583 - 36486534
Alignment:
Q  8 aatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||| ||||||||||| ||||||||||| |||||| |||||||||||    
T  36486583 aatgaatctaaaatctaaatttttgcttatagtagtgaacggagggtgta 36486534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 39216151 - 39216098
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| | ||||||  |||||||||||||||||||||| |||||||||||    
T  39216151 attgaatgagtctaaaatgcaaagttttgcttataatagtgaccggagggtgta 39216098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 46412780 - 46412833
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||||||||||  ||||| |||| |||| |||||||||||||||||||||||||    
T  46412780 attgaatgaatccaaaatgtaaatttttacttataatagtgatcggagggtgta 46412833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 48083596 - 48083649
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||||||||||||||| ||||||  ||||||||||    
T  48083596 attgaatgaatctaaaatataaagttttgcttatattagtgactggagggtgta 48083649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 31998283 - 31998327
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcgga 50  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||    
T  31998283 tgaatgaatctaaaatgcaaagttttgcttataatagtgatcgga 31998327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 9590790 - 9590739
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| ||||||  ||| |||||||||||||||||||||||| |||||    
T  9590790 tgaatgaatctaaaatgcaaaattttgcttataatagtgatcggagagtgta 9590739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 45115264 - 45115315
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| || | |||||||||||||||||| |||||||||||    
T  45115264 tgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggtgta 45115315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 46412749 - 46412698
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| | || ||||||||||||||||||||||| ||||||    
T  46412749 tgaatgaatctaaaatattaatttttgcttataatagtgatcggatggtgta 46412698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 49586135 - 49586084
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| |||| |||||||||||||||||| |||||| ||||    
T  49586135 tgaatgaatttaaaatgtaaacttttgcttataatagtgaccggaggatgta 49586084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 15351763 - 15351710
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||| ||||||||||| | |||| |||||||||||    
T  15351763 attgaatgaatttaaaatataaatttttgcttatatttgtgaccggagggtgta 15351710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 23398465 - 23398412
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtact 59  Q
    ||||||||| |||||| | |  |||||||||||||||||| |||||||||||||    
T  23398465 tgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtgtact 23398412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 39940578 - 39940627
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggaggg 53  Q
    ||||||||||| |||||  |||| |||| |||||||||||||||||||||    
T  39940578 attgaatgaatctaaaaagtaaatttttacttataatagtgatcggaggg 39940627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 8338721 - 8338673
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggt 54  Q
    ||||||||| |||||| || | |||||||||||||||||| ||||||||    
T  8338721 tgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggt 8338673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 3511757 - 3511703
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||    
T  3511757 attgaatgaatctaaaatgtaaagttttgcttatattagtgatcggaaggtgtac 3511703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 10308283 - 10308228
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtact 59  Q
    ||||||||||| |||||| ||||||||||||||||| ||||| || ||||||||||    
T  10308283 attgaatgaatctaaaatataaagttttgcttataacagtgaccgaagggtgtact 10308228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 14451003 - 14450952
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| || | ||||||||||||||||||||||||||||||    
T  14451003 tgaatgaatctaaaatgtagatttttgcttataatagtgatcggagggtgta 14450952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 33376179 - 33376128
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||| |||||    
T  33376179 tgaatgaatctaaaatgcaaagttttgcttataatagtgatcggagagtgta 33376128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 54713144 - 54713093
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| |||| |||||||||||||||||| |||||||||||    
T  54713144 tgaatgaatctaaaatgtaaatttttgcttataatagtgaccggagggtgta 54713093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 19934730 - 19934783
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||  || | ||||||||||||||||||||||||||||||    
T  19934730 attgaatgaatctaaaaaatagatttttgcttataatagtgatcggagggtgta 19934783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 36072618 - 36072565
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| ||||||  ||| |||||||||||||||||| |||||||||||    
T  36072618 attgaatgaatctaaaatgcaaaattttgcttataatagtgaccggagggtgta 36072565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 50686097 - 50686150
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||| | |||||||| |||||||||||||||||||    
T  50686097 attgaatgaatctaaaatataaaatgttgcttatgatagtgatcggagggtgta 50686150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 37060435 - 37060495
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||  |||||||||||||| || | |||||||||||||||| |||||||| ||||    
T  37060435 ttctttgtaaatttaggttgtctcaaaagttgtcaacaaaaatggttattcaaataacact 37060495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 3669604 - 3669549
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtact 59  Q
    ||||||||||| |||||| ||||  ||||||||||||||||| | |||||||||||    
T  3669604 attgaatgaatctaaaatataaatatttgcttataatagtgaccagagggtgtact 3669549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 16537310 - 16537259
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| || |||  ||||||||||||||||||||||||||||| ||||    
T  16537310 tgaatgaatctataatgcaaagttttgcttataatagtgatcggaggatgta 16537259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 26920764 - 26920819
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtact 59  Q
    ||||||||||| ||||||  |||||||| ||||||||||||| |||||| ||||||    
T  26920764 attgaatgaatctaaaatgcaaagttttacttataatagtgagcggaggatgtact 26920819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 35151707 - 35151656
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| |||| |||| ||||||||||||| |||||||||||    
T  35151707 tgaatgaatctaaaatataaaattttacttataatagtgaccggagggtgta 35151656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 49481926 - 49481875
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| |||| |||||||||||||||||| |||||| ||||    
T  49481926 tgaatgaatctaaaatgtaaacttttgcttataatagtgaccggaggatgta 49481875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 53176354 - 53176303
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| | || |||| |||||||||||||||||||||||||    
T  53176354 tgaatgaatataaaatgttaatttttacttataatagtgatcggagggtgta 53176303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 30869087 - 30869057
Alignment:
Q  28 ttttgcttataatagtgatcggagggtgtac 58  Q
    |||||||||||||||||||||||||||||||    
T  30869087 ttttgcttataatagtgatcggagggtgtac 30869057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 33377507 - 33377561
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||||| ||||||  ||| |||| |||||||||||| |||||||||||||    
T  33377507 attgaatgaatctaaaatgcaaaattttacttataatagtggtcggagggtgtac 33377561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 56557851 - 56557905
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaat 113  Q
    |||||| ||| ||||||||||| || || | ||||||||||||||||||||||||    
T  56557851 ttctttctatatttaggttgtcccaaaagttgtcaacaaaaatggttgttcaaat 56557905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 12672495 - 12672442
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||| ||||| |||||||| |||||||| ||||||    
T  12672495 attgaatgaatctaaaatgtaaatttttgtttataataatgatcggaaggtgta 12672442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 33036956 - 33037009
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||||||||||  ||||| | || |||||||||||||||||| |||||||||||    
T  33036956 attgaatgaatagaaaatgttaaattttgcttataatagtgaccggagggtgta 33037009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 38539526 - 38539473
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||| ||| |||||| |||| ||||||||||||||||||| ||| ||||||    
T  38539526 attgaataaatttaaaatataaatttttgcttataatagtgattggaaggtgta 38539473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 54164905 - 54164958
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||  || | |||||||||||||||||| |||||||||||    
T  54164905 attgaatgaatctaaaaaatagatttttgcttataatagtgaccggagggtgta 54164958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 54508217 - 54508164
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||| ||||||||||| |  |||||||||||||||    
T  54508217 attgaatgaatctaaaatataaatttttgcttatatttatgatcggagggtgta 54508164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 4983332 - 4983364
Alignment:
Q  25 aagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||||||||||||||||||| |||||    
T  4983332 aagttttgcttataatagtgatcggagagtgta 4983364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 18518403 - 18518351
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaa 111  Q
    |||||||||| ||||||||||| || || |||| ||||||||| |||||||||    
T  18518403 ttctttgtatatttaggttgtcccacaagtcgttaacaaaaattgttgttcaa 18518351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 29006883 - 29006827
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtactt 60  Q
    ||||||||||| |||||  || | |||||||||||||||||| |||| |||||||||    
T  29006883 attgaatgaatctaaaaaatagatttttgcttataatagtgaccggatggtgtactt 29006827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 38382020 - 38381976
Alignment:
Q  8 aatgaatgtaaaatctaaagttttgcttataatagtgatcggagg 52  Q
    ||||||| |||||| |||| |||||||||||||||||| ||||||    
T  38382020 aatgaatctaaaatgtaaatttttgcttataatagtgaccggagg 38381976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 31398320 - 31398372
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||| |||||| |||| |||||||||||||||||| ||||||||||||    
T  31398320 tgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgtac 31398372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 18097104 - 18097053
Alignment:
Q  8 aatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtact 59  Q
    ||||||| |||||| |||| |||||||||||||||||| |||||||||||||    
T  18097104 aatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgtact 18097053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 32254915 - 32254966
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| | || ||||||||||||||||||||||||||||||    
T  32254915 tgaatgaatctaaaatattaacttttgcttataatagtgatcggagggtgta 32254966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 11637218 - 11637165
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| ||||| |||||    
T  11637218 attgaatgaatttaaaatgtaatgttttgcttataatagtgaccggagagtgta 11637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 29418982 - 29418925
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtacttc 61  Q
    ||||||| |||||||||| |||  |||||||||||||||||| | |||||||||||||    
T  29418982 attgaattaatgtaaaatgtaattttttgcttataatagtgaacagagggtgtacttc 29418925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 6560751 - 6560805
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtactt 60  Q
    ||||||||| |||||| |||  ||||||||||| |||||| ||||||||||||||    
T  6560751 tgaatgaatctaaaatgtaattttttgcttatattagtgaccggagggtgtactt 6560805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 30917002 - 30916956
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcgga 50  Q
    ||||||| |||||||||| |||  |||||||||||||||||||||||    
T  30917002 attgaataaatgtaaaatgtaattttttgcttataatagtgatcgga 30916956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 8449668 - 8449721
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| | || |||||||||||||||||| |||||| ||||    
T  8449668 attgaatgaatctaaaatattaatttttgcttataatagtgaccggaggatgta 8449721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 8458472 - 8458525
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| | || |||||||||||||||||| |||||| ||||    
T  8458472 attgaatgaatctaaaatattaatttttgcttataatagtgaccggaggatgta 8458525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 13281582 - 13281541
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtga 45  Q
    ||||||||||| ||||||||| | ||||||||||||||||||    
T  13281582 attgaatgaatctaaaatctagatttttgcttataatagtga 13281541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 15517115 - 15517082
Alignment:
Q  28 ttttgcttataatagtgatcggagggtgtacttc 61  Q
    |||||||||||||||||| |||||||||||||||    
T  15517115 ttttgcttataatagtgaccggagggtgtacttc 15517082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 26527214 - 26527185
Alignment:
Q  28 ttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||||||||||||||||||||||    
T  26527214 ttttgcttataatagtgatcggagggtgta 26527185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 14532624 - 14532684
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||| |||||||| ||||| |||| |||||| |||||||||||||||||| ||||    
T  14532624 ttctttgtatatttaggttatctcacaaattgtcaacgaaaatggttgttcaaataacact 14532684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 29463115 - 29463175
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||| ||||||||||| || || | ||||||||||||||||||||||||| ||||    
T  29463115 ttctttgtatatttaggttgtcccacaagttgtcaacaaaaatggttgttcaaataacact 29463175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 26141801 - 26141750
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| |||| |||||||||||||||||| |||||||||||    
T  26141801 tgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgta 26141750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 71307 - 71254
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| || | |||||||||||||||||| |||||||||||    
T  71307 attgaatgaatctaaaatatagatttttgcttataatagtgaccggagggtgta 71254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 26045313 - 26045260
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||| |||||||||||||||| | |||||||||||    
T  26045313 attgaatgaatctaaaatataaatttttgcttataatagtaaccggagggtgta 26045260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 33075113 - 33075060
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||||||||||||||| ||||||  ||||||||||    
T  33075113 attgaatgaatctaaaatataaagttttgcttatattagtgactggagggtgta 33075060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 14772638 - 14772694
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtactt 60  Q
    ||||||| ||| |||||| ||||||||||||||||||||||| |||  |||||||||    
T  14772638 attgaattaatctaaaatataaagttttgcttataatagtgaccggctggtgtactt 14772694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 35942101 - 35942066
Alignment:
Q  23 taaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||||||||||||||||||| ||||||||||    
T  35942101 taaagttttgcttataatagtgatcagagggtgtac 35942066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 43117432 - 43117381
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| |  | ||||||||||||||||||||||||||||||    
T  43117432 tgaatgaatctaaaatattgatttttgcttataatagtgatcggagggtgta 43117381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 71377 - 71406
Alignment:
Q  28 ttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||||||||||||||||||||||    
T  71377 ttttgcttataatagtgatcggagggtgta 71406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 31691351 - 31691404
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| | |||| |||| |||| ||||||||||||||||||| |||||    
T  31691351 attgaatgaatctcaaatataaatttttacttataatagtgatcggagtgtgta 31691404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 42643165 - 42643116
Alignment:
Q  70 tttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||||||| || | |||||||||||| |||||||||||| ||||    
T  42643165 tttaggttgtctcacaagttgtcaacaaaaatagttgttcaaataacact 42643116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 7330071 - 7330119
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggt 54  Q
    ||||||||| ||||||  |||||||||||||||||| ||| ||||||||    
T  7330071 tgaatgaatctaaaatgcaaagttttgcttataataatgaccggagggt 7330119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 27314521 - 27314469
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    ||||||||| ||||| | ||| ||||||||||| |||||| ||||||||||||    
T  27314521 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtac 27314469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 40204488 - 40204432
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtactt 60  Q
    |||||||||||||| ||| || | ||||||||||||||||||||||||| |||||||    
T  40204488 attgaatgaatgtataatatagatttttgcttataatagtgatcggaggatgtactt 40204432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 26234118 - 26234169
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| |||||| |||| |||||||||||||||||| |||||||||||    
T  26234118 tgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgta 26234169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 32143450 - 32143404
Alignment:
Q  8 aatgaatgtaaaatctaaagttttgcttataatagtgatcggagggt 54  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  32143450 aatgaatttaaaatgtaaagttttgcttataatagtgaccggagggt 32143404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 1961345 - 1961304
Alignment:
Q  16 taaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  1961345 taaaatgtaaatttttgcttataatagtgatcggagggtgta 1961304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 41805322 - 41805269
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| ||||||  ||| |||||||||||||||||| |||||||||||    
T  41805322 attgaatgaatttaaaatgcaaaattttgcttataatagtgaccggagggtgta 41805269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 38821484 - 38821544
Alignment:
Q  59 ttctttgtatgtttaggttgtctcataaatcgtcaacaaaaatggttgttcaaatatcact 119  Q
    |||||||||| ||||||||||| || || | |||||||||||| |||||||||||| ||||    
T  38821484 ttctttgtatatttaggttgtcccaaaagttgtcaacaaaaattgttgttcaaataacact 38821544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 31102043 - 31102094
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||| ||||||  ||| |||||||||||||| |||||||||||||||    
T  31102043 tgaatgaatctaaaatgcaaacttttgcttataataatgatcggagggtgta 31102094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 42530586 - 42530637
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||||||||||||||| | || |||||||||||||||||| ||||| |||||    
T  42530586 tgaatgaatgtaaaatgttaatttttgcttataatagtgaccggagagtgta 42530637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 31101994 - 31101940
Alignment:
Q  7 gaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtacttc 61  Q
    |||||||| ||||||  |||  ||||||||||||||||| |||||||||||||||    
T  31101994 gaatgaatctaaaatgcaaacatttgcttataatagtgaccggagggtgtacttc 31101940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 6074858 - 6074809
Alignment:
Q  8 aatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||| ||||||  ||||||||| |||||||||||| |||||||||||    
T  6074858 aatgaatctaaaatgcaaagttttgtttataatagtgaccggagggtgta 6074809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11726546 - 11726490
Alignment:
Q  1 ttgattgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    |||||||||||||| |||||| | |  |||||||||||||||||| ||||||||||||    
T  11726546 ttgattgaatgaatctaaaatgttat-ttttgcttataatagtgaccggagggtgtac 11726490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 13994303 - 13994336
Alignment:
Q  26 agttttgcttataatagtgatcggagggtgtact 59  Q
    |||||||||||||||||||| |||||||||||||    
T  13994303 agttttgcttataatagtgaccggagggtgtact 13994336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 15446827 - 15446774
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||  | || |||||||||||||||||| |||||||||||    
T  15446827 attgaatgaatttaaaaaatgaatttttgcttataatagtgaccggagggtgta 15446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 32143498 - 32143539
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtga 45  Q
    ||||||||||| |||||| ||||||||||||||||| |||||    
T  32143498 attgaatgaatttaaaatgtaaagttttgcttataacagtga 32143539  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 32308375 - 32308404
Alignment:
Q  28 ttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||||||||||||||||||||||    
T  32308375 ttttgcttataatagtgatcggagggtgta 32308404  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 38181852 - 38181905
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    |||||||||||||||||| ||   |||||||||||||||| | |||||||||||    
T  38181852 attgaatgaatgtaaaatgtagttttttgcttataatagtaaccggagggtgta 38181905  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 38618487 - 38618528
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtga 45  Q
    |||||||||||||||||| |||| |||| |||||||||||||    
T  38618487 attgaatgaatgtaaaatgtaaatttttccttataatagtga 38618528  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 44089450 - 44089421
Alignment:
Q  28 ttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||||||||||||||||||||||    
T  44089450 ttttgcttataatagtgatcggagggtgta 44089421  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 37182910 - 37182954
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcgga 50  Q
    ||||||||| |||||| |||| |||||| ||||||||||||||||    
T  37182910 tgaatgaatttaaaatgtaaatttttgcgtataatagtgatcgga 37182954  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 38465881 - 38465937
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtactt 60  Q
    ||||||||||| |||||| || | ||||||||| ||||||||  |||||||||||||    
T  38465881 attgaatgaatctaaaatgtagatttttgcttacaatagtgactggagggtgtactt 38465937  T

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Target: scaffold0631 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 4395 - 4342
Alignment:
Q  4 attgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgta 57  Q
    ||||||||||| |||||| |||||||||||||||| ||||||  ||||||||||    
T  4395 attgaatgaatctaaaatataaagttttgcttatattagtgactggagggtgta 4342  T

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Target: scaffold0149 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 24700 - 24750
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgt 56  Q
    ||||||||| |||||| | || |||||||||||||||||| ||||||||||    
T  24700 tgaatgaatctaaaatattaatttttgcttataatagtgaccggagggtgt 24750  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 139342 - 139290
Alignment:
Q  6 tgaatgaatgtaaaatctaaagttttgcttataatagtgatcggagggtgtac 58  Q
    |||||||||||||||  || | |||||||||||||||||| || |||||||||    
T  139342 tgaatgaatgtaaaaaatagatttttgcttataatagtgaccgaagggtgtac 139290  T

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