View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19875_high_1 (Length: 898)
Name: NF19875_high_1
Description: NF19875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19875_high_1 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 818; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 818; E-Value: 0
Query Start/End: Original strand, 15 - 880
Target Start/End: Original strand, 35183702 - 35184567
Alignment:
| Q |
15 |
caaaggcattctggtacaccccgctctgttttcgtacatgagatggatcaacatcataaaaaatagggaaaacagtctgtttcaattctatatgacattc |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
35183702 |
caaaggcattctggtacaccccgctctgttttcgtacatgagatggatcggcatcataaaaaatagggaaaacagtctgtttcaattctgtatgatattc |
35183801 |
T |
 |
| Q |
115 |
agcaatagtggccatctcttccaaacaccatgttgactccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtagaagt |
214 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35183802 |
agcaatagtggccatctcttccaaacataatgttgactccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtagaagt |
35183901 |
T |
 |
| Q |
215 |
tgcggcgaaagggattctcctttttcaagtcttttgtcatccttgaaagcgaaaatacccttagttgttagatgagcataaagatgatcaacaaaagtgt |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
35183902 |
tgcggcgaaagggattctcctttttcaagtcttttgtcatccttgaaagcgaaaatacccttagttgttagatgagcatgaagatgatcaacaaaagtgc |
35184001 |
T |
 |
| Q |
315 |
tgcgggtgtcagcaccacggaaactgataaacacatcatatctatagctttggatgctattggaatcactggaagaacctatatctccctgacccaaatg |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35184002 |
tgcgggtgtcagcaccacggaaactgataaacacatcatatctatagctttggatgctattggaatcactggaagaacctatatctccctgacccaaatg |
35184101 |
T |
 |
| Q |
415 |
gatcaaatcggaagatgtcaaacgactctgtggtcgaaacagtggcaggagcatggacttctatgagagcaacatgtctggtgatataagaaatgaaaat |
514 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35184102 |
gatcaaatcggaagatgtcaaacgactctgtggtcgaaacagtggcaggagcatggacttctatgagagcaacatgtctggtgatataagaaatgaaaat |
35184201 |
T |
 |
| Q |
515 |
gcatctcatcaattaaatattaatgacaataagagttaaccttcaatttaggtcctagtccctgaactataaaaatacaataaatagtccttacaacatt |
614 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35184202 |
gcatctcatcaattaaatattaatgacaataagagttaactttcaatttagttcctagtccctgaactataaaaatacaataaatagtccttacaacatt |
35184301 |
T |
 |
| Q |
615 |
ctcaattcatcatgtttgtcccttatttactttgaaaataagatagaaactgaaagtaatagttcagagactactttgatagattgagaatagtataggg |
714 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35184302 |
ctcaattcatcatgtttgtcccttatttactttgaaaataggatagaaactgaaagtaatagttcagagactactttgatagattgagaatagtataggg |
35184401 |
T |
 |
| Q |
715 |
actttttattacatttatttagttcaaggaccaaagaataaagtggcggtacgtagtttaggaaccgaaatgaaggcctactctaaaaaactaatgttat |
814 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35184402 |
actttttattacatttatttagttcaaggaccaaagaataaagtggcggtacgtagtttaggaaccgaaatgaaggcctactctaaaaaactaatgttat |
35184501 |
T |
 |
| Q |
815 |
atgtaaattactgaataaaccatcaatttgatcattaaactagcactttctctccaagttagtccc |
880 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35184502 |
atgtaaattactgaataaaccatcaatttgatccttaaactagcactttctctccaagttagtccc |
35184567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 44 - 366
Target Start/End: Original strand, 35105782 - 35106104
Alignment:
| Q |
44 |
tttcgtacatgagatggatcaacatcataaaaaatagggaaaacagtctgtttcaattctatatgacattcagcaatagtggccatctcttccaaacacc |
143 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| | || | |||||||||| ||| ||||||||||||||||||| |
|
|
| T |
35105782 |
tttcgaacatgagatggatcaacatcataaaaaacagggaaaacagtttgtttcaatcttttacggcattcagcaacagtagccatctcttccaaacacc |
35105881 |
T |
 |
| Q |
144 |
atgttgactccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtagaagttgcggcgaaagggattctcctttttcaag |
243 |
Q |
| |
|
|||||||||| ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35105882 |
atgttgactcggcatatctttcagagaagacaacaatagaaacccgagaattttgaattgcttgaagaagttgcggcgaaagggattctcctttctcaag |
35105981 |
T |
 |
| Q |
244 |
tcttttgtcatccttgaaagcgaaaatacccttagttgttagatgagcataaagatgatcaacaaaagtgttgcgggtgtcagcaccacggaaactgata |
343 |
Q |
| |
|
|||| ||||||||||| || ||||||||||| || |||||||||||||||||||||| |||||||||||||| ||||| | ||| | |||||||||| |
|
|
| T |
35105982 |
cctttgatcatccttgaaggcaaaaataccctttctttttagatgagcataaagatgatcgacaaaagtgttgcgcgtgtctggacctctgaaactgata |
35106081 |
T |
 |
| Q |
344 |
aacacatcatatctatagctttg |
366 |
Q |
| |
|
||||| || |||||||||||||| |
|
|
| T |
35106082 |
aacacgtcgtatctatagctttg |
35106104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 15 - 393
Target Start/End: Original strand, 35177704 - 35178082
Alignment:
| Q |
15 |
caaaggcattctggtacaccccgctctgttttcgtacatgagatggatcaacatcataaaaaatagggaaaacagtctgtttcaattctatatgacattc |
114 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||||||| | ||||||||||| |||||||||||| ||| || | || ||||||| |
|
|
| T |
35177704 |
caaaggcattctggtacacaccgttctgttttcgtacatgagatggattgatatcataaaaaacagggaaaacagtttgtaagaaattgctacgacattc |
35177803 |
T |
 |
| Q |
115 |
agcaatagtggccatctcttccaaacaccatgttgactccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtagaagt |
214 |
Q |
| |
|
| ||||||| ||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| ||||| ||||| ||| || |||||||||| ||||| |
|
|
| T |
35177804 |
aacaatagtagccatttcttccaaacaccatgttgactcagcatatctttctgagaagacaacgatagatatccgtgaatttgcaattgcttgtcgaagt |
35177903 |
T |
 |
| Q |
215 |
tgcggcgaaagggattctcctttttcaagtcttttgtcatccttgaaagcgaaaatacccttagttgttagatgagcataaagatgatcaacaaaagtgt |
314 |
Q |
| |
|
||| |||||||| |||||||||| || || ||||| ||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
35177904 |
tgcagcgaaaggcattctcctttctcgagccttttatcatccttgaacgcaaaaataccttttcttgttagatgagcataaagatgatcaacaaaagtgt |
35178003 |
T |
 |
| Q |
315 |
tgcgggtgtcagcaccacggaaactgataaacacatcatatctatagctttggatgctattggaatcactggaagaacc |
393 |
Q |
| |
|
|||||||||| | ||| | ||||||||||||||| || ||| ||||||| || | | | |||||||| |||||||||| |
|
|
| T |
35178004 |
tgcgggtgtctggacctctgaaactgataaacacgtcgtatttatagctatgcactccactggaatcaatggaagaacc |
35178082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 15 - 362
Target Start/End: Original strand, 35169413 - 35169760
Alignment:
| Q |
15 |
caaaggcattctggtacaccccgctctgttttcgtacatgagatggatcaacatcataaaaaatagggaaaacagtctgtttcaattctatatgacattc |
114 |
Q |
| |
|
||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||| ||||||||| | ||| ||| || || | ||| |
|
|
| T |
35169413 |
caaaggcattctggtacacaccattctcttttcgtacatgagatggatcaatatcataaaaaacagggaaaactattcgttgcaaatcgttacatctttc |
35169512 |
T |
 |
| Q |
115 |
agcaatagtggccatctcttccaaacaccatgttgactccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtagaagt |
214 |
Q |
| |
|
| |||| || ||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||| || |||||||||| || || |
|
|
| T |
35169513 |
aacaatggtagccatttcttccaaacaccatgttgactcagcatatctttctgagaagacaacaatagaaatccgtgaatttgtaattgcttgtcgatgt |
35169612 |
T |
 |
| Q |
215 |
tgcggcgaaagggattctcctttttcaagtcttttgtcatccttgaaagcgaaaatacccttagttgttagatgagcataaagatgatcaacaaaagtgt |
314 |
Q |
| |
|
|||| |||| | |||||||||| || || ||||| ||||||||||| ||||||| |||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
35169613 |
tgcgttgaaaagcattctcctttctctagccttttatcatccttgaaggcgaaaacaccctttctagttagatgagcataaagatgatcaacaaaagtgt |
35169712 |
T |
 |
| Q |
315 |
tgcgggtgtcagcaccacggaaactgataaacacatcatatctatagc |
362 |
Q |
| |
|
| ||||||||||| || | |||||||||||||||||| ||| |||||| |
|
|
| T |
35169713 |
tacgggtgtcagcgcctctgaaactgataaacacatcgtatttatagc |
35169760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 21 - 348
Target Start/End: Original strand, 35054846 - 35055173
Alignment:
| Q |
21 |
cattctggtacaccccgctctgttttcgtacatgagatggatcaacatcataaaaaatagggaaaacagtctgtttcaattctatatgacattcagcaat |
120 |
Q |
| |
|
||||||| || ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||| || ||||| || | | ||| |||||||| |
|
|
| T |
35054846 |
cattctgatataccccactctgctttcgtacatcagatggatcaacatcataaaaaatagggaaaactgtttgtttgaaatactcacaacaatcagcaat |
35054945 |
T |
 |
| Q |
121 |
agtggccatctcttccaaacaccatgttgactccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtagaagttgcggc |
220 |
Q |
| |
|
| |||||||||||||||||||| ||||| || ||||| |||||||||||||||||||| |||| || ||| || |||||||||||||||| ||||| |
|
|
| T |
35054946 |
tgcagccatctcttccaaacaccaagttgattcggcatatgttttagagaagacaacaataaaaattcgcgaatttcgaattgcttgtagaagctgcggt |
35055045 |
T |
 |
| Q |
221 |
gaaagggattctcctttttcaagtcttttgtcatccttgaaagcgaaaatacccttagttgttagatgagcataaagatgatcaacaaaagtgttgcggg |
320 |
Q |
| |
|
|||| |||||||||| ||||| ||||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||||| | ||||| | |
|
|
| T |
35055046 |
gaaataaattctcctttctcaagacttttgtcatccttgaaggcaaaaataccttttcttgttagatgagcataaagatgatcaacaaaactattgcgag |
35055145 |
T |
 |
| Q |
321 |
tgtcagcaccacggaaactgataaacac |
348 |
Q |
| |
|
|||||| ||| | |||||||| ||||| |
|
|
| T |
35055146 |
tgtcaggacctctaaaactgatgaacac |
35055173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 80; Significance: 5e-37; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 50 - 381
Target Start/End: Complemental strand, 25484582 - 25484251
Alignment:
| Q |
50 |
acatgagatggatcaacatcataaaaaatagggaaaacagtctgtttcaattctatatgacattcagcaatagtggccatctcttccaaacaccatgttg |
149 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||| | ||| | |||| ||||| ||||| || |||||||||||||||| |
|
|
| T |
25484582 |
acatgagatggatcaacatcataaaaaacagggaaaacaacttgtttcaaatttattctagattcgctaatagcagccatttcatccaaacaccatgttg |
25484483 |
T |
 |
| Q |
150 |
actccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtagaagttgcggcgaaagggattctcctttttcaagtctttt |
249 |
Q |
| |
|
| ||||||| ||| ||||| ||||| |||||||| || || ||||||||||||||||||||| || |||| || ||||||||| | || || |
|
|
| T |
25484482 |
aagaagcataatctttggagaaaacaacgatagaaatgcgtgactgttgaattgcttgtagaagttggggtgaaatggcttctcctttctgtagctgctt |
25484383 |
T |
 |
| Q |
250 |
gtcatccttgaaagcgaaaatacccttagttgttagatgagcataaagatgatcaacaaaagtgttgcgggtgtcagcaccacggaaactgataaacaca |
349 |
Q |
| |
|
|||||||||||| | ||||||||| || | | |||||||| || ||||| |||||||| | || |||||||||| ||| | ||||||||| |||||| |
|
|
| T |
25484382 |
gtcatccttgaaggtgaaaataccttttctattgagatgagcgtagagatggtcaacaaaggaattacgggtgtcagaacctctgaaactgatgaacaca |
25484283 |
T |
 |
| Q |
350 |
tcatatctatagctttggatgctattggaatc |
381 |
Q |
| |
|
|| ||||||||||||||| ||||||| ||||| |
|
|
| T |
25484282 |
tcgtatctatagctttggttgctattagaatc |
25484251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 111 - 363
Target Start/End: Complemental strand, 25636762 - 25636510
Alignment:
| Q |
111 |
attcagcaatagtggccatctcttccaaacaccatgttgactccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtag |
210 |
Q |
| |
|
||||| |||||| ||||| || ||||||||||||||||| ||||||| ||| |||||||||| ||||||| ||| ||| || |||||| || | |
|
|
| T |
25636762 |
attcatcaatagcagccatttcatccaaacaccatgttgatgaagcataatctttggagaagacaatgatagaaacccgcgaatctttaattgcctgcaa |
25636663 |
T |
 |
| Q |
211 |
aagttgcggcgaaagggattctcctttttcaagtcttttgtcatccttgaaagcgaaaatacccttagttgttagatgagcataaagatgatcaacaaaa |
310 |
Q |
| |
|
|||||| | |||| |||||| ||||| | ||| ||||||||||||||| | ||||||| || | || ||||||||||| ||||| |||||||| |
|
|
| T |
25636662 |
aagttggagtgaaatggattcgcctttctgaagcgatttgtcatccttgaaggtcgaaataccttttctagtgagatgagcatagagatggtcaacaaag |
25636563 |
T |
 |
| Q |
311 |
gtgttgcgggtgtcagcaccacggaaactgataaacacatcatatctatagct |
363 |
Q |
| |
|
|||||||||||||||| ||| | |||||||||||| ||||||||| ||||||| |
|
|
| T |
25636562 |
gtgttgcgggtgtcaggacctctgaaactgataaatacatcatatttatagct |
25636510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 41 - 373
Target Start/End: Original strand, 25436248 - 25436580
Alignment:
| Q |
41 |
tgttttcgtacatgagatggatcaacatcataaaaaatagggaaaacagtctgtttcaattctatatgacattcagcaatagtggccatctcttccaaac |
140 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||| |||||| ||| |||||||||| | | | ||||| |||||| ||||| || ||||||| |
|
|
| T |
25436248 |
tgttttcgaacatgagatggatcgacatcataaaaaacagggaatacaacttgtttcaatttttttctagattcatcaatagcagccatttcatccaaac |
25436347 |
T |
 |
| Q |
141 |
accatgttgactccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtagaagttgcggcgaaagggattctcctttttc |
240 |
Q |
| |
|
|||||||||| ||||||| | | ||||| |||| ||| ||| ||| || | | ||||||||||||||||||| || |||| || ||||||||||| |
|
|
| T |
25436348 |
accatgttgatgaagcataatctcttgagaaaacaatgatacaaacccgtgaccgtcgaattgcttgtagaagttggggtgaaatggcttctcctttttg |
25436447 |
T |
 |
| Q |
241 |
aagtcttttgtcatccttgaaagcgaaaatacccttagttgttagatgagcataaagatgatcaacaaaagtgttgcgggtgtcagcaccacggaaactg |
340 |
Q |
| |
|
|| |||||||||||||| | |||||||| || | |||||||| | |||||||||||||||| |||||||| |||| ||| | |||||| |
|
|
| T |
25436448 |
gagctgcttgtcatccttgaaggtaaaaataccttttctaactagatgagagtggagatgatcaacaaaagaattgcgggtctcagaacctctaaaactg |
25436547 |
T |
 |
| Q |
341 |
ataaacacatcatatctatagctttggatgcta |
373 |
Q |
| |
|
|| |||||||| ||| ||| | ||| ||||||| |
|
|
| T |
25436548 |
atgaacacatcgtatttatggttttcgatgcta |
25436580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 111 - 359
Target Start/End: Complemental strand, 25442570 - 25442322
Alignment:
| Q |
111 |
attcagcaatagtggccatctcttccaaacaccatgttgactccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtag |
210 |
Q |
| |
|
||||| |||||| ||||| || ||||||||||||||||| ||||||| ||| |||||||||| ||||||| ||| ||| || |||||| || | |
|
|
| T |
25442570 |
attcatcaatagcagccatttcatccaaacaccatgttgatgaagcataatctttggagaagacaatgatagaaacccgcgaatctttaattgcctgcaa |
25442471 |
T |
 |
| Q |
211 |
aagttgcggcgaaagggattctcctttttcaagtcttttgtcatccttgaaagcgaaaatacccttagttgttagatgagcataaagatgatcaacaaaa |
310 |
Q |
| |
|
|||||| | |||| |||||| ||||| | ||| ||||||||||||||| |||||||||| || | || |||||| | || ||||| |||||||| |
|
|
| T |
25442470 |
aagttggagtgaaatggattcgcctttctgaagcgatttgtcatccttgaagacgaaaataccttttctagtgagatgatcgtagagatggtcaacaaag |
25442371 |
T |
 |
| Q |
311 |
gtgttgcgggtgtcagcaccacggaaactgataaacacatcatatctat |
359 |
Q |
| |
|
| ||||||||||||| ||| | |||||||| |||||||| ||||||| |
|
|
| T |
25442370 |
gaattgcgggtgtcaggacctctaaaactgatgaacacatcgtatctat |
25442322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 360
Target Start/End: Original strand, 25478730 - 25479049
Alignment:
| Q |
41 |
tgttttcgtacatgagatggatcaacatcataaaaaatagggaaaacagtctgtttcaattctatatgacattcagcaatagtggccatctcttccaaac |
140 |
Q |
| |
|
|||||||| |||||||||||||| |||| ||| |||| ||| |||||| | ||||| | || | || | || || |||||| | ||| || ||||||| |
|
|
| T |
25478730 |
tgttttcggacatgagatggatcgacataatagaaaacaggtaaaacaatttgttttagttttgtaaggcagtcggcaataacagtcatttcatccaaac |
25478829 |
T |
 |
| Q |
141 |
accatgttgactccgcataatttttagagaagacaacaatagaaatccgagaactttgaattgcttgtagaagttgcggcgaaagggattctcctttttc |
240 |
Q |
| |
|
|||| ||||| | ||||||| || ||||||||||| ||||||| || || ||||||||| ||| ||||||| | |||| |||||| ||||| || |
|
|
| T |
25478830 |
accaagttgagccagcataatcttctgagaagacaactatagaaagacgcgattgttgaattgcctgtcgaagttggagtgaaatggattcccctttctc |
25478929 |
T |
 |
| Q |
241 |
aagtcttttgtcatccttgaaagcgaaaatacccttagttgttagatgagcataaagatgatcaacaaaagtgttgcgggtgtcagcaccacggaaactg |
340 |
Q |
| |
|
|| | ||||||| |||| | ||||||||| || | || ||||||||||| ||||| ||| |||| || || ||||||||| ||| | ||||||| |
|
|
| T |
25478930 |
gagctgctggtcatccatgaacgtgaaaataccttttctagtgagatgagcatagagatggtcagcaaaggttttacgggtgtcaatacctctgaaactg |
25479029 |
T |
 |
| Q |
341 |
ataaacacatcatatctata |
360 |
Q |
| |
|
|||||||| || |||||||| |
|
|
| T |
25479030 |
ataaacacgtcgtatctata |
25479049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 65; Significance: 4e-28; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 500356 - 500444
Alignment:
| Q |
284 |
agatgagcataaagatgatcaacaaaagtgttgcgggtgtcagcaccacggaaactgataaacacatcatatctatagctttggatgct |
372 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||| | ||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
500356 |
agatgagcatagagatgatcaacaaaagtgttgcgtgtgtcggaacctctgaaactgataaacacatcatatctatagctttggatgct |
500444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 16466136 - 16466182
Alignment:
| Q |
130 |
ctcttccaaacaccatgttgactccgcataatttttagagaagacaa |
176 |
Q |
| |
|
|||||||||||||||| ||||| ||||||| ||||||||||| |||| |
|
|
| T |
16466136 |
ctcttccaaacaccattttgacaccgcatagtttttagagaaaacaa |
16466182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University