View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19877_low_7 (Length: 273)
Name: NF19877_low_7
Description: NF19877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19877_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 259
Target Start/End: Original strand, 34135011 - 34135252
Alignment:
| Q |
18 |
aaggcttacataatannnnnnngatgaaacatacctttgtttaggcatacttaagtgaaagcattacatactgatattaaacgttaacttatcttaaata |
117 |
Q |
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| T |
34135011 |
aaggcttacataatatttttttgatgaaacatacctttgtttaggcatacttaagtgaaagcattacatactgatattaaacgttaacttatcttaaata |
34135110 |
T |
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| Q |
118 |
gatcctgcgggttctttgttatgtttaggatggggtaagcggaaactatcaaacatctattattggagtgtgacttttataagaatgtttggcattaggc |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
34135111 |
gatcctgcgggttctttgttatgtttaggatggggtaagcggaaactatcaaacatctattattggagtgtgacttttataagaatgttaggcattaggt |
34135210 |
T |
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| Q |
218 |
tctttggtggcgtacatatatttaggaatgaaatttgtgttt |
259 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
34135211 |
tctttggtggcgtacatatatttaggaatgaaatttgtgttt |
34135252 |
T |
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