View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19877_low_8 (Length: 273)

Name: NF19877_low_8
Description: NF19877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19877_low_8
NF19877_low_8
[»] chr5 (6 HSPs)
chr5 (19-273)||(18964707-18964961)
chr5 (73-158)||(29642352-29642437)
chr5 (37-158)||(29647633-29647754)
chr5 (74-158)||(29597544-29597628)
chr5 (86-160)||(24330889-24330963)
chr5 (86-131)||(23086788-23086833)
[»] chr6 (7 HSPs)
chr6 (91-273)||(17369675-17369854)
chr6 (28-167)||(20770598-20770737)
chr6 (28-160)||(6921340-6921472)
chr6 (28-160)||(6947870-6948002)
chr6 (28-144)||(6954525-6954641)
chr6 (36-150)||(6935218-6935332)
chr6 (93-144)||(6942973-6943024)
[»] chr7 (50 HSPs)
chr7 (77-249)||(14076675-14076834)
chr7 (77-249)||(14386703-14386862)
chr7 (24-149)||(19604464-19604589)
chr7 (74-162)||(29874505-29874593)
chr7 (33-160)||(19344565-19344692)
chr7 (86-167)||(660830-660911)
chr7 (79-162)||(18514775-18514858)
chr7 (49-156)||(22100462-22100569)
chr7 (42-167)||(22080830-22080955)
chr7 (80-162)||(29859454-29859536)
chr7 (74-162)||(20352089-20352177)
chr7 (74-162)||(29867230-29867318)
chr7 (96-162)||(6864795-6864861)
chr7 (74-156)||(22063636-22063718)
chr7 (91-160)||(1985945-1986014)
chr7 (42-167)||(22070073-22070198)
chr7 (86-143)||(29445663-29445720)
chr7 (86-168)||(29454085-29454167)
chr7 (71-132)||(20338915-20338976)
chr7 (89-161)||(12819905-12819977)
chr7 (43-151)||(13416910-13417018)
chr7 (86-162)||(20058045-20058121)
chr7 (74-162)||(20374491-20374579)
chr7 (89-161)||(24002208-24002280)
chr7 (86-162)||(29476328-29476404)
chr7 (74-162)||(29881250-29881338)
chr7 (80-127)||(9807824-9807871)
chr7 (37-144)||(19597661-19597768)
chr7 (73-143)||(22021385-22021455)
chr7 (89-162)||(20133305-20133378)
chr7 (89-162)||(20140806-20140879)
chr7 (89-161)||(19351058-19351130)
chr7 (75-119)||(19637248-19637292)
chr7 (83-159)||(19645621-19645697)
chr7 (89-161)||(24010392-24010464)
chr7 (89-149)||(29106823-29106883)
chr7 (89-160)||(15443973-15444044)
chr7 (79-162)||(19357909-19357992)
chr7 (87-162)||(24385208-24385283)
chr7 (73-160)||(36260246-36260333)
chr7 (79-149)||(18952906-18952976)
chr7 (79-149)||(18982953-18983023)
chr7 (79-149)||(18997599-18997669)
chr7 (102-144)||(19374778-19374820)
chr7 (86-140)||(22028634-22028688)
chr7 (86-144)||(29899380-29899438)
chr7 (82-160)||(46769373-46769451)
chr7 (75-167)||(19325968-19326060)
chr7 (86-134)||(21218724-21218772)
chr7 (86-162)||(36255372-36255448)
[»] chr4 (17 HSPs)
chr4 (42-167)||(11970965-11971090)
chr4 (37-159)||(53774797-53774919)
chr4 (42-162)||(11981671-11981791)
chr4 (80-161)||(3557726-3557807)
chr4 (80-161)||(3565744-3565825)
chr4 (80-167)||(3560941-3561028)
chr4 (75-167)||(53790548-53790640)
chr4 (85-165)||(1686270-1686350)
chr4 (103-161)||(19359160-19359218)
chr4 (37-156)||(10482138-10482257)
chr4 (83-149)||(6392827-6392893)
chr4 (86-156)||(8443448-8443518)
chr4 (71-144)||(837767-837840)
chr4 (37-114)||(10467999-10468076)
chr4 (75-144)||(35767013-35767082)
chr4 (74-134)||(6372439-6372499)
chr4 (88-168)||(53430081-53430161)
[»] chr3 (3 HSPs)
chr3 (85-167)||(3625739-3625821)
chr3 (86-156)||(25901273-25901343)
chr3 (86-156)||(25915291-25915361)
[»] chr1 (8 HSPs)
chr1 (72-164)||(39379047-39379139)
chr1 (86-150)||(4570933-4570997)
chr1 (89-167)||(4366478-4366556)
chr1 (89-149)||(10218994-10219054)
chr1 (86-141)||(4014974-4015029)
chr1 (75-150)||(50645485-50645560)
chr1 (86-160)||(21855373-21855447)
chr1 (86-134)||(15961234-15961282)
[»] scaffold0867 (1 HSPs)
scaffold0867 (49-156)||(4663-4770)
[»] chr2 (8 HSPs)
chr2 (86-167)||(14514906-14514987)
chr2 (44-150)||(554440-554546)
chr2 (86-134)||(20975564-20975612)
chr2 (86-134)||(25698513-25698561)
chr2 (86-161)||(18908798-18908873)
chr2 (86-161)||(18913546-18913621)
chr2 (86-161)||(18920754-18920829)
chr2 (108-162)||(22051737-22051791)
[»] scaffold0354 (1 HSPs)
scaffold0354 (88-164)||(7471-7547)
[»] chr8 (2 HSPs)
chr8 (74-162)||(27618485-27618573)
chr8 (86-134)||(29390292-29390340)
[»] scaffold0242 (2 HSPs)
scaffold0242 (86-162)||(13718-13794)
scaffold0242 (86-162)||(22553-22629)


Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 19 - 273
Target Start/End: Complemental strand, 18964961 - 18964707
Alignment:
Q  19 actccgaccctttgtgtattgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaag 118  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18964961 actccgaccctttgtgtattgatgaattgcctttgttttactcatgatcttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaag 18964862  T
Q  119 actcttggactcaatttcttaaaatttgttatcagaatcttcaattagacgactatagactcgatgttgttcctcaagtgtttccactgtgtctctccga 218  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18964861 actcttggactcaatttcttaaaatttgttatcagaatcttcaaatagacgactatagactcgatgttgttcctcaagtgtttccactgtgtctctccga 18964762  T
Q  219 aaatggttatacattgatactggcaatcaatcattccgtattcaatataagagac 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18964761 aaatggttatacattgatactggcaatcaatcattccgtattcaatataagagac 18964707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 29642352 - 29642437
Alignment:
Q  73 aaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatct 158  Q
    |||||||||||| |||||||||||||||  ||||||||| ||||| | |||||||||||||| ||||||||| ||| |||||||||    
T  29642352 aaaactcatttcgttatatggcaaatgatagaatttggatttgaacaatcttggactcaattccttaaaattagttttcagaatct 29642437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 29647633 - 29647754
Alignment:
Q  37 ttgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttc 136  Q
    ||||||||||||||||||||  ||||  || || | |||||||||||  |||||||||||||||  ||||||||| ||||| | |||||||||||||| |    
T  29647633 ttgatggattgcctttgtttttctcaccatcttaagaaaactcattttgttatatggcaaatgatagaatttggatttgaacaatcttggactcaattcc 29647732  T
Q  137 ttaaaatttgttatcagaatct 158  Q
    |||||||| ||| ||| |||||    
T  29647733 ttaaaattagttttcaaaatct 29647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 158
Target Start/End: Complemental strand, 29597628 - 29597544
Alignment:
Q  74 aaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatct 158  Q
    ||||||||||  |||||||||||||||  ||||||||||||||| | |||||||||||||| ||||||||| ||| ||| |||||    
T  29597628 aaactcattttgttatatggcaaatgattgaatttggagttgaacaatcttggactcaattccttaaaattagttttcaaaatct 29597544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 24330963 - 24330889
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttc 160  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||| | |||||| || |||| || |||||||    
T  24330963 ttatatgggagatgaaggaatttggggttgaagattcttggactcaactccttaaagttagttaccataatcttc 24330889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 23086788 - 23086833
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactca 131  Q
    |||||||||| |||||||| ||||||||| |||| |||||||||||    
T  23086788 ttatatggcagatgaaggagtttggagttcaagagtcttggactca 23086833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 91 - 273
Target Start/End: Original strand, 17369675 - 17369854
Alignment:
Q  91 tggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattagacgactatagactcgatgttgttc 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||   |  |||||||| |||| ||||     
T  17369675 tggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttcaaata---gcttatagacttgatgatgttt 17369771  T
Q  191 ctcaagtgtttccactgtgtctctccgaaaatggttatacattgatactggcaatcaatcattccgtattcaatataagagac 273  Q
     ||||||||||||| ||||||| ||||||||||||  |||||||||| ||| ||||||| | || ||||| |||||| |||||    
T  17369772 ttcaagtgtttccattgtgtctatccgaaaatggtggtacattgatattggtaatcaataactcggtattaaatataggagac 17369854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 20770598 - 20770737
Alignment:
Q  28 ctttgtgtattgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttgga 127  Q
    |||||||| |||||||||||  |||||||  |||| ||| || |||||||| ||||  |||||||||||||||||||||||||| ||||||| || ||||    
T  20770598 ctttgtgtgttgatggattgtatttgtttttctcatgatgttaaaaaaacttattttgttatatggcaaatgaaggaatttggaattgaagagtcatgga 20770697  T
Q  128 ctcaatttcttaaaatttgttatcagaatcttcaattaga 167  Q
     |||||| ||||||||| ||||||| ||||||||| ||||    
T  20770698 ttcaattccttaaaattagttatcataatcttcaaataga 20770737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 6921472 - 6921340
Alignment:
Q  28 ctttgtgtattgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttgga 127  Q
    |||| |||||||||||||||||| | |||  || | |||| | | ||||| |||||  |||| ||||||||||||||||||||||||||||| |||||||    
T  6921472 ctttctgtattgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttgga 6921373  T
Q  128 ctcaatttcttaaaatttgttatcagaatcttc 160  Q
    ||||||| ||||||||| |||||  ||||||||    
T  6921372 ctcaattccttaaaattagttatacgaatcttc 6921340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 6948002 - 6947870
Alignment:
Q  28 ctttgtgtattgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttgga 127  Q
    |||| ||| ||||||||||||||||||||  | || |||||  | ||||| || ||  || | ||||||||||||||||||||||||||||| |||||||    
T  6948002 ctttctgtgttgatggattgcctttgtttttcacatgatttcaagaaaacccactttgttctttggcaaatgaaggaatttggagttgaagaatcttgga 6947903  T
Q  128 ctcaatttcttaaaatttgttatcagaatcttc 160  Q
    ||||||| ||||||||| |||||  ||||||||    
T  6947902 ctcaattccttaaaattagttatgtgaatcttc 6947870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 6954641 - 6954525
Alignment:
Q  28 ctttgtgtattgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttgga 127  Q
    |||| |||||||||||||||||| |||||  || | |||||  | ||||| |||||  |||| ||||||||||||||||||||||||||||| |||||||    
T  6954641 ctttctgtattgatggattgcctctgtttatcttatgatttcaacaaaacccattttgttatttggcaaatgaaggaatttggagttgaagaatcttgga 6954542  T
Q  128 ctcaatttcttaaaatt 144  Q
    |||||||  ||||||||    
T  6954541 ctcaattgattaaaatt 6954525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 6935332 - 6935218
Alignment:
Q  36 attgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaattt 135  Q
    ||||||||||||||| | |||  || | |||||| | ||||| ||||   |||| |||||||||||||||||||||||| |||| ||||||||| ||||     
T  6935332 attgatggattgcctctatttttcttatgattttaagaaaacccattatgttatttggcaaatgaaggaatttggagttcaagaatcttggactaaattc 6935233  T
Q  136 cttaaaatttgttat 150  Q
    ||||||||| |||||    
T  6935232 cttaaaattagttat 6935218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 6943024 - 6942973
Alignment:
Q  93 gcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatt 144  Q
    ||||||||||||||||||||||||||| |||| ||| ||||| |||||||||    
T  6943024 gcaaatgaaggaatttggagttgaagaatcttagacgcaattccttaaaatt 6942973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 6e-43; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 249
Target Start/End: Original strand, 14076675 - 14076834
Alignment:
Q  77 ctcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattagacgactatag 176  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||             
T  14076675 ctcatttcgttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttcaaataga--------- 14076765  T
Q  177 actcgatgttgttcctcaagtgtttccactgtgtctctccgaaaatggttatacattgatactggcaatcaat 249  Q
        |||||||||||||||||||||||| ||||||||||||| || |||  |||||||||| ||| |||||||    
T  14076766 ----gatgttgttcctcaagtgtttccattgtgtctctccgagaaaggtggtacattgatattgggaatcaat 14076834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 249
Target Start/End: Original strand, 14386703 - 14386862
Alignment:
Q  77 ctcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattagacgactatag 176  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||             
T  14386703 ctcatttcgttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttcaaataga--------- 14386793  T
Q  177 actcgatgttgttcctcaagtgtttccactgtgtctctccgaaaatggttatacattgatactggcaatcaat 249  Q
        |||||||||||||||||||||||| ||||||||||||| || |||  |||||||||| ||| |||||||    
T  14386794 ----gatgttgttcctcaagtgtttccattgtgtctctccgagaaaggtggtacattgatattgggaatcaat 14386862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 19604589 - 19604464
Alignment:
Q  24 gaccctttgtgtattgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactct 123  Q
    |||||||  ||| |||||||| | | |||||||  |||| |||||| | |||||||| || ||||||||||| ||||||||||||||||||||||||||     
T  19604589 gacccttattgtgttgatggactccatttgtttttctcatgattttcataaaactcactttattatatggcagatgaaggaatttggagttgaagactcc 19604490  T
Q  124 tggactcaatttcttaaaatttgtta 149  Q
    ||||||||||| ||||||||| ||||    
T  19604489 tggactcaattccttaaaattagtta 19604464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 29874505 - 29874593
Alignment:
Q  74 aaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||| ||||||||| ||||||| |||||||||    
T  29874505 aaactgatttcattatatggcaaatgaagaaatttggggttgaagattcttggactccattacttaaaattagttatcaaaatcttcaa 29874593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 160
Target Start/End: Complemental strand, 19344692 - 19344565
Alignment:
Q  33 tgtattgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaa 132  Q
    |||||||||||| |||||||||||  ||||  || |  | || ||||||||  |||||||||| |||| |||||||||||||||| | ||||||||||||    
T  19344692 tgtattgatggactgcctttgtttttctcacaatctcaagaacactcattttgttatatggcagatgatggaatttggagttgaacaatcttggactcaa 19344593  T
Q  133 tttcttaaaatttgttatcagaatcttc 160  Q
    |||||||||||| ||| |||||||||||    
T  19344592 tttcttaaaattagttttcagaatcttc 19344565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 660911 - 660830
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattaga 167  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| ||||||||| ||||    
T  660911 ttatatggcagatgaaggaatttcgagttgaagagtcttggactcaattccttaaaattagttatcataatcttcaaataga 660830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 18514858 - 18514775
Alignment:
Q  79 catttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||| ||||||||| |||||  ||||||||||    
T  18514858 catttcattatatggaaaatggacgaatttggagttgaaaactcttggactcaattccttaaaattagttatatgaatcttcaa 18514775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 22100462 - 22100569
Alignment:
Q  49 ctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgtt 148  Q
    ||||||||  |||| |||||  ||||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||| ||  | |||||| |||    
T  22100462 ctttgtttttctcatgatttcaaaaaaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagtt 22100561  T
Q  149 atcagaat 156  Q
    ||||||||    
T  22100562 atcagaat 22100569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 22080830 - 22080955
Alignment:
Q  42 ggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaa 141  Q
    |||||| ||||||||  |||| |||||  || |||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||  ||  | |||    
T  22080830 ggattgtctttgtttttctcatgatttcaaacaaactcattttattatatggcaaatgaagcaatttggagttcaagagtcttggactcggttattcaaa 22080929  T
Q  142 atttgttatcagaatcttcaattaga 167  Q
    ||| ||||||||||||| ||| ||||    
T  22080930 attagttatcagaatctccaaataga 22080955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 29859454 - 29859536
Alignment:
Q  80 atttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||| |||||||| | |||||| |||||||||||||||| |||||||| | ||||||||||||| ||||||| |||||||||    
T  29859454 atttcgttatatgggagatgaagaaatttggagttgaagattcttggaccccatttcttaaaattagttatcacaatcttcaa 29859536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 20352089 - 20352177
Alignment:
Q  74 aaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||||||||  | |||||| ||||||||||||||||||||||||| || ||||||||| || |||||||| ||||| | |||||||||    
T  20352089 aaactcattttgtaatatgggaaatgaaggaatttggagttgaagattcatggactcaactttttaaaattagttatgataatcttcaa 20352177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 29867230 - 29867318
Alignment:
Q  74 aaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||| |||| |||||||||||||||||| |||| || |||||||| |||||||||||||| |||| |||| |||| || |||||||||    
T  29867230 aaactgattttattatatggcaaatgaagaaattcggggttgaagattcttggactcaattccttagaattagttaccataatcttcaa 29867318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 6864861 - 6864795
Alignment:
Q  96 aatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||| | ||||||| |||||||||    
T  6864861 aatgaaggaatttggagttgaagagtcttggactcagttccttaaaactagttatcataatcttcaa 6864795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 22063636 - 22063718
Alignment:
Q  74 aaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaat 156  Q
    ||||||||||  |||||||||||||||||||||||||| || |||| ||||||||||| ||  | |||||| |||||||||||    
T  22063636 aaactcattttgttatatggcaaatgaaggaatttggatttcaagagtcttggactcagttattcaaaattagttatcagaat 22063718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 1986014 - 1985945
Alignment:
Q  91 tggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttc 160  Q
    |||||||||||||||||||| |||||||| ||||||||||||||  |||||||| |||||  ||||||||    
T  1986014 tggcaaatgaaggaatttggcgttgaagaatcttggactcaattgtttaaaattagttatatgaatcttc 1985945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 22070073 - 22070198
Alignment:
Q  42 ggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaa 141  Q
    |||||| ||||||||  |||| |||||  ||  ||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||  ||  | |||    
T  22070073 ggattgtctttgtttttctcatgatttcaaacgaactcattttattatatggcaaatgaagcaatttggagttcaagagtcttggactcggttattcaaa 22070172  T
Q  142 atttgttatcagaatcttcaattaga 167  Q
    ||| ||||| ||||||| ||| ||||    
T  22070173 attagttataagaatctccaaataga 22070198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 29445720 - 29445663
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaat 143  Q
    |||||||||| ||||||||||| || |||||||||||||||||||||||||| |||||    
T  29445720 ttatatggcagatgaaggaattaggggttgaagactcttggactcaatttctaaaaat 29445663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 29454167 - 29454085
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattagac 168  Q
    |||||||||  |||| | |||||||||||||||| ||||||||||||||  |||||||| |||||||  |||||||| |||||    
T  29454167 ttatatggcggatgatgaaatttggagttgaagattcttggactcaattctttaaaattagttatcaagatcttcaaatagac 29454085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 20338915 - 20338976
Alignment:
Q  71 aaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaa 132  Q
    |||||||||||||  | |||||| ||||||||||||| ||||||||||| ||||||||||||    
T  20338915 aaaaaactcattttgtaatatggaaaatgaaggaattaggagttgaagattcttggactcaa 20338976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 12819977 - 12819905
Alignment:
Q  89 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 161  Q
    ||||||| |||| |||||||||||||||| | || ||||||||||| ||||||||  ||| ||||||||||||    
T  12819977 tatggcagatgacggaatttggagttgaacaatcctggactcaattccttaaaatcagttgtcagaatcttca 12819905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 13417018 - 13416910
Alignment:
Q  43 gattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaa 142  Q
    ||||| ||||||||  || | |||||| | |||||  |||| || |||||||||||||||||||||||||||||||| ||||||  | ||||  ||||||    
T  13417018 gattgtctttgtttttcttatgattttaagaaaacctattttatcatatggcaaatgaaggaatttggagttgaagagtcttgggttgaattcgttaaaa 13416919  T
Q  143 tttgttatc 151  Q
    || ||||||    
T  13416918 ttagttatc 13416910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 20058121 - 20058045
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    |||||||| ||||| |||||||  |||||||||| ||||||  |||||||||||||||| ||||| | |||||||||    
T  20058121 ttatatggaaaatggaggaattcagagttgaagagtcttggtgtcaatttcttaaaattagttatgaaaatcttcaa 20058045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 20374579 - 20374491
Alignment:
Q  74 aaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||||||||  | |||||| ||||||||||||||||||||| ||| || |||| |||| || |||||||| ||||| | |||||||||    
T  20374579 aaactcattttgtaatatgggaaatgaaggaatttggagttggagattcatggattcaactttttaaaattagttataataatcttcaa 20374491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 24002208 - 24002280
Alignment:
Q  89 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 161  Q
    ||||||| |||||||| |  |||||| |||| |||||||||||||| ||||| ||| ||||||||||||||||    
T  24002208 tatggcatatgaaggagtacggagttcaagagtcttggactcaattacttaagattagttatcagaatcttca 24002280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 29476404 - 29476328
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    |||||||||| ||||||||||| ||   |||  |||||||||||||||||||||||||  ||||||| |||||||||    
T  29476404 ttatatggcagatgaaggaattagggaatgacaactcttggactcaatttcttaaaataagttatcaaaatcttcaa 29476328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 29881250 - 29881338
Alignment:
Q  74 aaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||| |||| ||| | |||||||||||| ||||||| |||||||| |||||||||||||| |||| |||| |||| || | |||||||    
T  29881250 aaactgattttattgtttggcaaatgaagaaatttggggttgaagattcttggactcaattccttagaattagttaccatagtcttcaa 29881338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 9807824 - 9807871
Alignment:
Q  80 atttcattatatggcaaatgaaggaatttggagttgaagactcttgga 127  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  9807824 atttcgttatatggcagatgaaggaatttggagttgaagagtcttgga 9807871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 19597768 - 19597661
Alignment:
Q  37 ttgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttc 136  Q
    |||||||||| |||||||||   ||| |||||| |   |||| |||| || |||||||| ||||||||||||| ||||||||| || |||||||| ||||    
T  19597768 ttgatggattccctttgtttttgtcatgattttcatggaactgattttatcatatggcagatgaaggaatttgaagttgaagagtcatggactcagtttc 19597669  T
Q  137 ttaaaatt 144  Q
    | ||||||    
T  19597668 tcaaaatt 19597661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 143
Target Start/End: Original strand, 22021385 - 22021455
Alignment:
Q  73 aaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaat 143  Q
    ||||| |||||  |||||||||| |||| ||| | |||||||||||| |||||||||||||| ||||||||    
T  22021385 aaaacccatttggttatatggcagatgatggattatggagttgaagaatcttggactcaattacttaaaat 22021455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 20133378 - 20133305
Alignment:
Q  89 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||| ||  |||| ||| | ||||| |||||||||    
T  20133378 tatggcaaatgaaagaatttggagttgaagattcttggattcagttatttaacattagctatcacaatcttcaa 20133305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 20140879 - 20140806
Alignment:
Q  89 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||||||||||||||||||||||||||| | ||||||| |||  || |||| ||| | ||||| |||||||||    
T  20140879 tatggcaaatgaaggaatttggagttgaaaattcttggattcagctttttaacattagctatcacaatcttcaa 20140806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 19351130 - 19351058
Alignment:
Q  89 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 161  Q
    ||||||| |||| ||||||||||||||| || |||||||||| ||| || |||||| ||| |||| |||||||    
T  19351130 tatggcagatgatggaatttggagttgaggagtcttggactccattcctcaaaattagttttcaggatcttca 19351058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 19637292 - 19637248
Alignment:
Q  75 aactcatttcattatatggcaaatgaaggaatttggagttgaaga 119  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||    
T  19637292 aactgattttattatatggcaaatgaaggaatttggagttcaaga 19637248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 19645697 - 19645621
Alignment:
Q  83 tcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatctt 159  Q
    |||| |||||||| ||||||||||||||| ||||||| || |||||||  || ||||||||| ||||| ||| ||||    
T  19645697 tcataatatggcagatgaaggaatttggaattgaagagtcatggactctgttacttaaaattagttatgagagtctt 19645621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 24010392 - 24010464
Alignment:
Q  89 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 161  Q
    ||||||| |||||||| |  || ||| |||| |||||||||||||| ||||| ||| ||||||||||||||||    
T  24010392 tatggcatatgaaggagtacggggttcaagagtcttggactcaattacttaagattagttatcagaatcttca 24010464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 29106823 - 29106883
Alignment:
Q  89 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgtta 149  Q
    ||||||| |||||| ||||||| |||||||| |||||||||||| || |||||||| ||||    
T  29106823 tatggcagatgaagaaatttggggttgaagagtcttggactcaactttttaaaattagtta 29106883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 15443973 - 15444044
Alignment:
Q  89 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttc 160  Q
    ||||||| |||||||| | |||||||||||| ||||||||||||||  |||| ||  |||| ||||||||||    
T  15443973 tatggcatatgaaggagtatggagttgaagagtcttggactcaattatttaagatgagttaccagaatcttc 15444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 19357909 - 19357992
Alignment:
Q  79 catttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    |||||| || ||||| | |||| ||||||||||||| |||| ||||||||||||||  | |||||| ||| |||| ||||||||    
T  19357909 catttcgttttatggaagatgatggaatttggagttcaagagtcttggactcaattcttaaaaattagttttcaggatcttcaa 19357992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 24385208 - 24385283
Alignment:
Q  87 tatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||||| | |||||| | |||||||||||| | ||||||| || ||||||||||||| || |||| |||||||||    
T  24385208 tatatggaagatgaagaactttggagttgaaaagtcttggagtcgatttcttaaaattagtcatcataatcttcaa 24385283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 36260246 - 36260333
Alignment:
Q  73 aaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttc 160  Q
    |||||| ||||  |||||||| | ||| | ||||||||||||||||| ||||||| |||| || |||||||| | ||||| |||||||    
T  36260246 aaaactgattttgttatatggaagatggaagaatttggagttgaagagtcttggattcaacttattaaaattagctatcaaaatcttc 36260333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 18952976 - 18952906
Alignment:
Q  79 catttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgtta 149  Q
    ||||| || |||||||| ||||||||||||||||||||  | || |||||||| || ||||||||| ||||    
T  18952976 cattttatcatatggcagatgaaggaatttggagttgacaagtcatggactcagttccttaaaattagtta 18952906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 18983023 - 18982953
Alignment:
Q  79 catttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgtta 149  Q
    ||||| || |||||||| ||||||||||||||||||||  | || |||||||| || ||||||||| ||||    
T  18983023 cattttatcatatggcagatgaaggaatttggagttgacaagtcctggactcagttccttaaaattagtta 18982953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 18997669 - 18997599
Alignment:
Q  79 catttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgtta 149  Q
    ||||| || |||||||| ||||||||||||||||||||  | || |||||||| || ||||||||| ||||    
T  18997669 cattttatcatatggcagatgaaggaatttggagttgacaagtcctggactcagttccttaaaattagtta 18997599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 19374778 - 19374820
Alignment:
Q  102 ggaatttggagttgaagactcttggactcaatttcttaaaatt 144  Q
    ||||||||||||||||   ||||||||||||||||||||||||    
T  19374778 ggaatttggagttgaacggtcttggactcaatttcttaaaatt 19374820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 22028634 - 22028688
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaa 140  Q
    |||||||| |||||| ||| | |||||||||||| |||||||||||||| |||||    
T  22028634 ttatatggaaaatgacggattatggagttgaagagtcttggactcaattacttaa 22028688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 29899380 - 29899438
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatt 144  Q
    |||||||||| |||||| ||||||| |||||||| || |||||||||||| | ||||||    
T  29899380 ttatatggcagatgaagaaatttggggttgaagagtcctggactcaatttttaaaaatt 29899438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 46769373 - 46769451
Alignment:
Q  82 ttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttc 160  Q
    |||||||| ||||| |||||   ||| |||||||||||  ||||||||||| ||||||||||| |||| || |||||||    
T  46769373 ttcattatgtggcagatgaaaatattcggagttgaagagccttggactcaacttcttaaaattagttaccaaaatcttc 46769451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 19326060 - 19325968
Alignment:
Q  75 aactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattaga 167  Q
    |||||||||  |||||||||| |||  |||||||||||| ||| | ||||||||||||||  | |||||  ||| ||||||| ||||| ||||    
T  19326060 aactcattttgttatatggcatatgtcggaatttggagtagaacaatcttggactcaattcatcaaaatcagttttcagaatgttcaagtaga 19325968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 21218772 - 21218724
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatt 134  Q
    ||||||||||||||| ||||||||||| |||  | ||||||||||||||    
T  21218772 ttatatggcaaatgacggaatttggagatgataagtcttggactcaatt 21218724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 36255372 - 36255448
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    |||||||| ||||| |  |||||||||||||||| |||||||||||| |  ||||| || | ||||| |||||||||    
T  36255372 ttatatggaaaatggaaaaatttggagttgaagagtcttggactcaactcattaaagttagctatcaaaatcttcaa 36255448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 167
Target Start/End: Complemental strand, 11971090 - 11970965
Alignment:
Q  42 ggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaa 141  Q
    |||||| ||||||||  |||| ||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |    
T  11971090 ggattgtctttgtttttctcatgattttgaacaaactcattttgttatatggcaaatgaaggaatttggagtggaagagtcttggactcaatttcttaga 11970991  T
Q  142 atttgttatcagaatcttcaattaga 167  Q
    ||| ||||||| ||||||||| ||||    
T  11970990 attagttatcataatcttcaaataga 11970965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 53774797 - 53774919
Alignment:
Q  37 ttgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttc 136  Q
    |||||||||||  |||||||  || | |||||| || ||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  53774797 ttgatggattgtatttgtttttcttatgattttaaagaaactcattttgttatatggcaaatgaaggaatttggagttgaagagtcttggactcaattcc 53774896  T
Q  137 ttaaaatttgttatcagaatctt 159  Q
    |||||||| ||||||||||||||    
T  53774897 ttaaaattagttatcagaatctt 53774919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 11981791 - 11981671
Alignment:
Q  42 ggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaa 141  Q
    |||||| ||||||||  |||| |||||| || ||||||||||  |||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||    
T  11981791 ggattgtctttgtttttctcatgattttcaacaaactcattttgttatatggcaaatgaaggaatttggagtggaagagtcctggactcgatttcttaaa 11981692  T
Q  142 atttgttatcagaatcttcaa 162  Q
    ||| ||||||  |||||||||    
T  11981691 attagttatcttaatcttcaa 11981671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 3557726 - 3557807
Alignment:
Q  80 atttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 161  Q
    |||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||  |||||||    
T  3557726 attttattatatggcatatgaaggaatttggggttgaagagtcttggactcaatttcttaaaattagttatcatgatcttca 3557807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 3565744 - 3565825
Alignment:
Q  80 atttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 161  Q
    |||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||  |||||||    
T  3565744 attttattatatggcagatgaaggaatttggggttgaagagtcttggactcaatttcttaaaattagttatcatgatcttca 3565825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 3561028 - 3560941
Alignment:
Q  80 atttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattaga 167  Q
    |||| ||||| ||||| |||||  ||||||| |||||||| |||||||||||||||||||||||| |||||||  |||||||||||||    
T  3561028 attttattatttggcagatgaaaaaatttggggttgaagagtcttggactcaatttcttaaaattagttatcatgatcttcaattaga 3560941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 53790548 - 53790640
Alignment:
Q  75 aactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattaga 167  Q
    ||||||||| ||||||||| | ||||   |||||||| ||||| | |||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  53790548 aactcattttattatatggaagatgacaaaatttggatttgaacaatcttggactcaatttcttaaaattagttttcagaatcttcaagtaga 53790640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 1686350 - 1686270
Alignment:
Q  85 attatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaatta 165  Q
    ||||||||||| |||||||||||||| ||||| || |||||||||||||||||||||  | ||||| |  |||||||||||    
T  1686350 attatatggcagatgaaggaatttggcgttgacgagtcttggactcaatttcttaaatatagttattatgatcttcaatta 1686270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 19359160 - 19359218
Alignment:
Q  103 gaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 161  Q
    ||||||||||||||||| |||||||||||| || |||||||| | ||||| ||||||||    
T  19359160 gaatttggagttgaagagtcttggactcaacttattaaaattaggtatcaaaatcttca 19359218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 10482138 - 10482257
Alignment:
Q  37 ttgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttc 136  Q
    ||||||||||| ||||||||   ||| |||| |||  ||||| ||||  ||||||||||||||||||| ||||||||| |    ||||||| ||||||      
T  10482138 ttgatggattgtctttgttttggtcatgattatgaggaaacttattttgttatatggcaaatgaaggattttggagttcagtcgtcttggattcaattat 10482237  T
Q  137 ttaaaatttgttatcagaat 156  Q
    ||||||||  ||||||||||    
T  10482238 ttaaaattacttatcagaat 10482257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 6392827 - 6392893
Alignment:
Q  83 tcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgtta 149  Q
    |||| ||||||||||||||||| ||||||||| | || ||||||| ||||||  |||||||| ||||    
T  6392827 tcatcatatggcaaatgaaggattttggagttcacgagtcttggattcaattatttaaaattagtta 6392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 8443518 - 8443448
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaat 156  Q
    |||| ||||| |||||||| ||||||||| | || ||||||| ||||||  |||||||| |||||||||||    
T  8443518 ttatttggcagatgaaggattttggagttcacgagtcttggattcaattatttaaaattagttatcagaat 8443448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 837767 - 837840
Alignment:
Q  71 aaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatt 144  Q
    ||||||| |||||  ||||||||||||||||| | ||||| ||| |||| ||||||| ||||||  ||||||||    
T  837767 aaaaaacccattttgttatatggcaaatgaagaattttggtgttcaagagtcttggattcaattatttaaaatt 837840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 10467999 - 10468076
Alignment:
Q  37 ttgatggattgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagtt 114  Q
    ||||||||||| ||||||||   ||| |||| |||  ||||| ||||  ||||||||||||||||||| |||||||||    
T  10467999 ttgatggattgtctttgtttcggtcatgattatgaggaaacttattttgttatatggcaaatgaaggattttggagtt 10468076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 35767013 - 35767082
Alignment:
Q  75 aactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatt 144  Q
    |||||||||  |||||||| | ||| | ||||||||||||||||| ||||||| |||| | |||||||||    
T  35767013 aactcattttgttatatggaagatggaagaatttggagttgaagagtcttggattcaactccttaaaatt 35767082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 6372439 - 6372499
Alignment:
Q  74 aaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatt 134  Q
    |||| ||||| |||||||||||||||||||| | ||||||| |||| |||| || ||||||    
T  6372439 aaacccattttattatatggcaaatgaaggattctggagttcaagagtcttagattcaatt 6372499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 53430161 - 53430081
Alignment:
Q  88 atatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattagac 168  Q
    |||||||| |||||| ||| ||| |  ||||| |||||||||||||| ||||||||| |||| ||  |||||||| |||||    
T  53430161 atatggcagatgaagaaatatggggccgaagattcttggactcaattccttaaaattagttaccaacatcttcaagtagac 53430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 3625739 - 3625821
Alignment:
Q  85 attatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattaga 167  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  3625739 attatatggcaaatgaagaaatttggggttgaagagtcttggactcaatttcttaaaattagttatcaaaatcttcaattaga 3625821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 25901343 - 25901273
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaat 156  Q
    |||||||| |||||||||| ||| ||||| |||| ||||||| ||||||  | |||||| |||||||||||    
T  25901343 ttatatggaaaatgaaggattttcgagttcaagagtcttggattcaattgttaaaaattagttatcagaat 25901273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 25915361 - 25915291
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaat 156  Q
    |||||||| |||||||||| ||| ||||| |||| ||||||| ||||||  | |||||| |||||||||||    
T  25915361 ttatatggaaaatgaaggattttcgagttcaagagtcttggattcaattgttaaaaattagttatcagaat 25915291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 39379139 - 39379047
Alignment:
Q  72 aaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaatt 164  Q
    ||||||| |||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||  |||||||  ||||||||||    
T  39379139 aaaaactgattttattatatggcagatgaaggaatttggggttgaagagtcttggactcaatttcttaaaatcagttatcatgatcttcaatt 39379047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 4570933 - 4570997
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttat 150  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||| |||||    
T  4570933 ttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 4570997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 4366556 - 4366478
Alignment:
Q  89 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattaga 167  Q
    ||||||| |||||| |||| || |||||||| |||||||||| |||||||||| || |||| |||||||||||| ||||    
T  4366556 tatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaataga 4366478  T

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Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 10218994 - 10219054
Alignment:
Q  89 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgtta 149  Q
    |||||||||||||| |||||||  ||||||| |||||||||||||| ||||||||| ||||    
T  10218994 tatggcaaatgaagaaatttgggattgaagattcttggactcaattacttaaaattagtta 10219054  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 4015029 - 4014974
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaa 141  Q
    |||||||||| |||||| ||||||| |||||||| |||||||||||||| ||||||    
T  4015029 ttatatggcagatgaagaaatttggggttgaagattcttggactcaattccttaaa 4014974  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 50645560 - 50645485
Alignment:
Q  75 aactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttat 150  Q
    |||||||||  |||| |||||||||||||| ||||||||| |||| ||||||| ||||||  |||||||| |||||    
T  50645560 aactcattttgttatgtggcaaatgaaggattttggagttcaagagtcttggattcaattatttaaaattagttat 50645485  T

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Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 21855447 - 21855373
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttc 160  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||| | |||||| || |||| || |||||||    
T  21855447 ttatatgggagatgaaggaatttggggttgaagattcttggactcaactccttaaagttagttaccataatcttc 21855373  T

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Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 15961234 - 15961282
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatt 134  Q
    |||||||| |||||||| ||||||||| |||||| ||||||||||||||    
T  15961234 ttatatggaaaatgaagaaatttggagctgaagaatcttggactcaatt 15961282  T

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Target: scaffold0867 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 4770 - 4663
Alignment:
Q  49 ctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgtt 148  Q
    ||||||||  |||| |||||  ||||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||| ||  | |||||| |||    
T  4770 ctttgtttttctcatgatttcaaaaaaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagtt 4671  T
Q  149 atcagaat 156  Q
    ||||||||    
T  4670 atcagaat 4663  T

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Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 14514906 - 14514987
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaattaga 167  Q
    |||||||| ||||| | ||||||||||||||||| |||||||||||||| ||||||||| |||||  |||||||||| ||||    
T  14514906 ttatatggaaaatggatgaatttggagttgaagattcttggactcaattccttaaaattagttatatgaatcttcaaataga 14514987  T

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Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 554440 - 554546
Alignment:
Q  44 attgcctttgtttgactcaagattttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaat 143  Q
    |||| ||||||||  |||| ||||||||   ||| ||| | ||||||||||||||||  |||| ||||||| |||| |||||||||||||| ||||||||    
T  554440 attgtctttgtttttctcacgattttgagggaacccatcttattatatggcaaatgatagaatatggagttaaagagtcttggactcaattacttaaaat 554539  T
Q  144 ttgttat 150  Q
    | |||||    
T  554540 tagttat 554546  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 20975564 - 20975612
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatt 134  Q
    ||||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  20975564 ttatatggcaaatgagggaatttggagttgaagattcttggattcaatt 20975612  T

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Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 25698513 - 25698561
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatt 134  Q
    |||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  25698513 ttatatggcaaatgagagaatttggagttgaagactcttggactaaatt 25698561  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 18908873 - 18908798
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 161  Q
    |||||||| | |||| ||||||||||||| |||| |||||||||||||| || |||||| ||| ||| ||||||||    
T  18908873 ttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagttttcaaaatcttca 18908798  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 18913621 - 18913546
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 161  Q
    |||||||| | |||| ||||||||||||| |||| |||||||||||||| || |||||| ||| ||| ||||||||    
T  18913621 ttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagttttcaaaatcttca 18913546  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 18920829 - 18920754
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttca 161  Q
    |||||||| | |||| ||||||||||||| |||| |||||||||||||| || |||||| ||| ||| ||||||||    
T  18920829 ttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagttttcaaaatcttca 18920754  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 22051791 - 22051737
Alignment:
Q  108 tggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||||| |||| | ||||||||||||| | |||||| |||||||||||||||||    
T  22051791 tggagttcaagaatattggactcaatttttcaaaattagttatcagaatcttcaa 22051737  T

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Target: scaffold0354 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 7471 - 7547
Alignment:
Q  88 atatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaatt 164  Q
    ||||||||||||||||||||||||||||| || ||||||  |||||| ||||||||| | |||| ||||||||||||    
T  7471 atatggcaaatgaaggaatttggagttgatgagtcttgggttcaattccttaaaattagctatcggaatcttcaatt 7547  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 27618485 - 27618573
Alignment:
Q  74 aaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    ||||||||||  |||||||| ||||| | ||| | ||||||||||| ||||||||||| || |||||| || |||||||||||||||||    
T  27618485 aaactcattttgttatatggaaaatggaagaactcggagttgaagagtcttggactcagttgcttaaagttagttatcagaatcttcaa 27618573  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 29390292 - 29390340
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatt 134  Q
    |||||||||| |||| |||||||||||||||||| ||||| ||| ||||    
T  29390292 ttatatggcagatgagggaatttggagttgaagaatcttgaactaaatt 29390340  T

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Target: scaffold0242 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 13794 - 13718
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    |||||||||| ||||||||||| |||  ||| || ||||||||||| |||||||||||  | ||||| |||||||||    
T  13794 ttatatggcagatgaaggaattaggaaatgatgaatcttggactcagtttcttaaaataaggtatcaaaatcttcaa 13718  T

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Target: scaffold0242; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 22629 - 22553
Alignment:
Q  86 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaa 162  Q
    |||||||||| ||||||||||| |||  ||| || ||||||||||| |||||||||||  | ||||| |||||||||    
T  22629 ttatatggcagatgaaggaattaggaaatgatgaatcttggactcagtttcttaaaataaggtatcaaaatcttcaa 22553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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