View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19878_high_39 (Length: 425)

Name: NF19878_high_39
Description: NF19878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19878_high_39
NF19878_high_39
[»] chr3 (51 HSPs)
chr3 (1-414)||(34060802-34061214)
chr3 (12-96)||(18834-18912)
chr3 (12-96)||(18975-19053)
chr3 (16-93)||(45899595-45899672)
chr3 (8-100)||(3304972-3305063)
chr3 (2-94)||(8847489-8847581)
chr3 (2-88)||(13647073-13647162)
chr3 (2-65)||(34750294-34750357)
chr3 (1-94)||(36730189-36730282)
chr3 (2-94)||(37509091-37509183)
chr3 (2-93)||(35306313-35306404)
chr3 (7-66)||(44695713-44695772)
chr3 (2-59)||(4759887-4759944)
chr3 (2-59)||(51817349-51817406)
chr3 (2-94)||(44570423-44570515)
chr3 (14-94)||(51256123-51256202)
chr3 (9-56)||(49976185-49976232)
chr3 (7-65)||(39974848-39974906)
chr3 (1-59)||(41345990-41346048)
chr3 (1-59)||(52570797-52570855)
chr3 (2-59)||(8715538-8715595)
chr3 (2-59)||(9067425-9067482)
chr3 (7-60)||(11316980-11317033)
chr3 (1-94)||(12051018-12051111)
chr3 (8-101)||(21324489-21324582)
chr3 (1-66)||(29213396-29213461)
chr3 (1-100)||(11675287-11675384)
chr3 (2-94)||(25102359-25102450)
chr3 (2-94)||(32415549-32415641)
chr3 (147-202)||(2008525-2008580)
chr3 (2-93)||(10854840-10854931)
chr3 (1-99)||(4542389-4542487)
chr3 (152-202)||(25199073-25199123)
chr3 (7-53)||(26850536-26850582)
chr3 (152-202)||(39170905-39170955)
chr3 (16-66)||(50420692-50420742)
chr3 (1-66)||(12060095-12060160)
chr3 (2-59)||(20227417-20227474)
chr3 (154-202)||(1994781-1994829)
chr3 (5-49)||(4298362-4298406)
chr3 (5-60)||(8498075-8498131)
chr3 (154-202)||(45805455-45805503)
chr3 (3-42)||(32070681-32070720)
chr3 (14-60)||(35069657-35069703)
chr3 (1-42)||(39436497-39436538)
chr3 (11-60)||(46160526-46160575)
chr3 (2-59)||(46317501-46317558)
chr3 (7-59)||(12905324-12905376)
chr3 (3-55)||(15502674-15502726)
chr3 (14-94)||(31647284-31647364)
chr3 (8-60)||(48313881-48313933)
[»] chr4 (71 HSPs)
chr4 (8-125)||(35675233-35675350)
chr4 (2-94)||(51018416-51018508)
chr4 (12-99)||(39158373-39158460)
chr4 (2-100)||(966556-966654)
chr4 (1-93)||(20456550-20456642)
chr4 (1-93)||(36486722-36486814)
chr4 (2-85)||(3769802-3769885)
chr4 (2-100)||(23260678-23260777)
chr4 (7-106)||(52341569-52341668)
chr4 (8-94)||(31494704-31494790)
chr4 (1-94)||(15986246-15986339)
chr4 (18-94)||(23690972-23691048)
chr4 (2-94)||(31754918-31755010)
chr4 (2-94)||(50514650-50514742)
chr4 (1-93)||(51266905-51266997)
chr4 (1-96)||(46823450-46823545)
chr4 (2-103)||(23765549-23765650)
chr4 (1-94)||(26040396-26040489)
chr4 (1-94)||(30475405-30475498)
chr4 (2-66)||(34016633-34016697)
chr4 (2-94)||(54339093-54339184)
chr4 (1-103)||(29462772-29462874)
chr4 (1-59)||(33951715-33951773)
chr4 (16-93)||(1457586-1457663)
chr4 (1-94)||(31010463-31010556)
chr4 (7-60)||(35927316-35927369)
chr4 (1-94)||(48513599-48513692)
chr4 (1-94)||(55120072-55120164)
chr4 (2-94)||(19328965-19329057)
chr4 (2-70)||(30199823-30199891)
chr4 (1-106)||(3472098-3472196)
chr4 (2-105)||(13966528-13966631)
chr4 (8-99)||(30617924-30618015)
chr4 (147-202)||(46550632-46550687)
chr4 (1-59)||(26831822-26831880)
chr4 (2-128)||(45688689-45688815)
chr4 (8-65)||(10567322-10567379)
chr4 (7-60)||(32584561-32584614)
chr4 (2-94)||(34316759-34316852)
chr4 (1-94)||(52895704-52895797)
chr4 (1-93)||(3684529-3684620)
chr4 (2-101)||(27544481-27544577)
chr4 (1-49)||(35511216-35511264)
chr4 (8-92)||(40593584-40593667)
chr4 (1-100)||(21760544-21760643)
chr4 (2-60)||(27545876-27545934)
chr4 (2-83)||(20811254-20811335)
chr4 (2-83)||(31168125-31168206)
chr4 (2-103)||(35808433-35808534)
chr4 (1-94)||(47188701-47188794)
chr4 (8-64)||(1801613-1801668)
chr4 (1-94)||(2362609-2362704)
chr4 (7-59)||(10100155-10100207)
chr4 (138-202)||(41844169-41844233)
chr4 (2-94)||(41956250-41956342)
chr4 (1-65)||(49483106-49483170)
chr4 (2-94)||(55669719-55669811)
chr4 (16-59)||(25928454-25928497)
chr4 (144-203)||(41464730-41464789)
chr4 (147-202)||(47541737-47541792)
chr4 (7-49)||(20435832-20435874)
chr4 (3-45)||(29722119-29722161)
chr4 (1-59)||(32131157-32131215)
chr4 (2-94)||(45088050-45088139)
chr4 (2-60)||(52021046-52021104)
chr4 (6-59)||(40436096-40436149)
chr4 (8-65)||(52937289-52937346)
chr4 (1-70)||(53484619-53484688)
chr4 (22-70)||(13498174-13498222)
chr4 (8-56)||(42627142-42627189)
chr4 (1-61)||(44478714-44478774)
[»] chr2 (56 HSPs)
chr2 (1-94)||(11659242-11659335)
chr2 (4-105)||(2239551-2239652)
chr2 (2-93)||(10900287-10900378)
chr2 (13-94)||(12695286-12695366)
chr2 (2-65)||(13997941-13998004)
chr2 (7-94)||(27495103-27495190)
chr2 (1-94)||(33726360-33726453)
chr2 (154-202)||(9009115-9009163)
chr2 (1-66)||(747527-747592)
chr2 (5-94)||(44299721-44299810)
chr2 (6-94)||(17095107-17095195)
chr2 (11-59)||(34220692-34220740)
chr2 (2-95)||(34392589-34392678)
chr2 (14-90)||(40798372-40798448)
chr2 (1-59)||(9201531-9201589)
chr2 (2-59)||(35445327-35445385)
chr2 (1-94)||(6999182-6999275)
chr2 (14-59)||(15004942-15004987)
chr2 (1-94)||(33848966-33849059)
chr2 (2-59)||(39401572-39401628)
chr2 (1-94)||(41436458-41436551)
chr2 (2-59)||(44173134-44173191)
chr2 (1-93)||(862570-862662)
chr2 (2-82)||(2966532-2966612)
chr2 (6-94)||(17056098-17056186)
chr2 (6-94)||(17068545-17068633)
chr2 (2-94)||(39085829-39085921)
chr2 (152-203)||(3870158-3870209)
chr2 (7-106)||(14120864-14120963)
chr2 (7-66)||(29260170-29260229)
chr2 (2-72)||(33864357-33864427)
chr2 (7-65)||(34512655-34512713)
chr2 (2-59)||(765187-765244)
chr2 (2-99)||(2136411-2136508)
chr2 (1-118)||(5671485-5671602)
chr2 (6-59)||(17074528-17074581)
chr2 (1-66)||(23685688-23685753)
chr2 (16-61)||(32949520-32949565)
chr2 (7-96)||(34334203-34334292)
chr2 (154-203)||(34480054-34480103)
chr2 (36-105)||(41890182-41890251)
chr2 (11-103)||(2958515-2958607)
chr2 (1-65)||(3454734-3454797)
chr2 (1-41)||(37230253-37230293)
chr2 (11-66)||(10001832-10001887)
chr2 (17-128)||(16242002-16242113)
chr2 (147-202)||(37721574-37721629)
chr2 (1-60)||(2805395-2805456)
chr2 (1-42)||(9965091-9965132)
chr2 (146-199)||(28733717-28733770)
chr2 (152-197)||(30706213-30706258)
chr2 (2-59)||(43140360-43140417)
chr2 (1-65)||(1729494-1729557)
chr2 (2-38)||(11445328-11445364)
chr2 (2-66)||(17603819-17603883)
chr2 (16-56)||(30831636-30831676)
[»] chr6 (32 HSPs)
chr6 (10-103)||(34780023-34780116)
chr6 (14-103)||(6507438-6507527)
chr6 (3-105)||(31220365-31220467)
chr6 (1-103)||(12226367-12226469)
chr6 (138-202)||(994864-994928)
chr6 (6-93)||(21186058-21186145)
chr6 (2-92)||(14232528-14232618)
chr6 (1-94)||(10855413-10855505)
chr6 (138-203)||(26606207-26606272)
chr6 (1-70)||(27127543-27127612)
chr6 (1-94)||(29964281-29964374)
chr6 (2-101)||(20775030-20775129)
chr6 (8-66)||(28014643-28014701)
chr6 (2-59)||(7875218-7875275)
chr6 (2-59)||(8324141-8324198)
chr6 (1-105)||(26539081-26539186)
chr6 (1-61)||(5029488-5029548)
chr6 (7-59)||(7880469-7880521)
chr6 (7-66)||(6866923-6866982)
chr6 (8-71)||(21427287-21427350)
chr6 (1-40)||(29692377-29692416)
chr6 (8-94)||(12191473-12191559)
chr6 (8-70)||(21479861-21479923)
chr6 (156-202)||(33009751-33009797)
chr6 (2-94)||(5578254-5578346)
chr6 (3-42)||(19646029-19646068)
chr6 (7-94)||(26572119-26572206)
chr6 (1-55)||(12775129-12775183)
chr6 (1-70)||(20027310-20027379)
chr6 (8-65)||(32251362-32251418)
chr6 (1-49)||(12175584-12175632)
chr6 (26-94)||(16437643-16437711)
[»] chr7 (55 HSPs)
chr7 (2-105)||(32204151-32204254)
chr7 (8-94)||(10575802-10575888)
chr7 (8-110)||(34835828-34835930)
chr7 (9-99)||(44296945-44297035)
chr7 (8-94)||(48879650-48879736)
chr7 (1-98)||(4686079-4686176)
chr7 (7-103)||(35003577-35003672)
chr7 (7-105)||(16082474-16082572)
chr7 (1-94)||(30388696-30388789)
chr7 (2-87)||(40763236-40763321)
chr7 (21-105)||(35404310-35404394)
chr7 (13-69)||(43189685-43189741)
chr7 (12-99)||(6548505-6548592)
chr7 (7-94)||(27053535-27053622)
chr7 (1-107)||(1907625-1907730)
chr7 (7-93)||(29687457-29687543)
chr7 (1-118)||(5240368-5240485)
chr7 (2-62)||(40774279-40774339)
chr7 (16-94)||(16931871-16931949)
chr7 (16-94)||(16937254-16937332)
chr7 (1-59)||(42222236-42222294)
chr7 (1-59)||(49069570-49069628)
chr7 (2-59)||(3681709-3681766)
chr7 (2-94)||(8380421-8380513)
chr7 (7-94)||(1910224-1910311)
chr7 (1-64)||(5543056-5543119)
chr7 (3-94)||(7322991-7323082)
chr7 (7-61)||(5977757-5977811)
chr7 (1-83)||(8258674-8258756)
chr7 (19-105)||(18800202-18800288)
chr7 (1-59)||(29034702-29034760)
chr7 (1-59)||(31626077-31626135)
chr7 (1-59)||(43567542-43567600)
chr7 (2-103)||(41188823-41188924)
chr7 (2-59)||(46478593-46478649)
chr7 (2-50)||(36279143-36279191)
chr7 (1-65)||(41141033-41141097)
chr7 (1-92)||(41769684-41769776)
chr7 (14-65)||(14718167-14718218)
chr7 (28-83)||(16957656-16957711)
chr7 (7-94)||(24359750-24359837)
chr7 (147-202)||(30783412-30783467)
chr7 (3-66)||(35239825-35239888)
chr7 (1-44)||(40066953-40066996)
chr7 (3-104)||(42552510-42552610)
chr7 (2-98)||(3720151-3720247)
chr7 (2-94)||(8292725-8292817)
chr7 (3-95)||(44260541-44260632)
chr7 (147-202)||(45627340-45627395)
chr7 (8-42)||(48454865-48454899)
chr7 (3-49)||(48705656-48705702)
chr7 (1-70)||(1566968-1567037)
chr7 (2-42)||(5348009-5348049)
chr7 (8-60)||(18529196-18529248)
chr7 (4-44)||(28452835-28452875)
[»] chr1 (68 HSPs)
chr1 (8-94)||(43168121-43168207)
chr1 (8-94)||(44359712-44359798)
chr1 (8-94)||(14331817-14331903)
chr1 (1-99)||(17402923-17403021)
chr1 (2-100)||(40920159-40920259)
chr1 (1-62)||(41898892-41898953)
chr1 (1-101)||(51424130-51424230)
chr1 (1-127)||(22346270-22346396)
chr1 (1-59)||(40845266-40845324)
chr1 (1-94)||(8892804-8892897)
chr1 (1-94)||(43433755-43433848)
chr1 (2-94)||(28277516-28277608)
chr1 (7-103)||(48938607-48938702)
chr1 (2-94)||(41147512-41147604)
chr1 (2-101)||(28850944-28851042)
chr1 (4-93)||(27210705-27210795)
chr1 (1-94)||(25177482-25177575)
chr1 (1-66)||(50295466-50295531)
chr1 (2-94)||(27209755-27209847)
chr1 (16-96)||(34644143-34644223)
chr1 (147-198)||(26764623-26764674)
chr1 (14-97)||(27160139-27160222)
chr1 (2-92)||(47655405-47655495)
chr1 (1-59)||(47895349-47895407)
chr1 (2-59)||(4656031-4656088)
chr1 (2-59)||(42607358-42607415)
chr1 (153-202)||(47370041-47370090)
chr1 (2-94)||(34874547-34874639)
chr1 (1-68)||(11385843-11385910)
chr1 (2-93)||(26469616-26469707)
chr1 (2-93)||(33929947-33930038)
chr1 (2-56)||(4940774-4940828)
chr1 (10-60)||(6519293-6519343)
chr1 (7-65)||(8414856-8414914)
chr1 (2-56)||(31975505-31975559)
chr1 (152-202)||(34690134-34690184)
chr1 (152-202)||(34694662-34694712)
chr1 (2-94)||(45721735-45721824)
chr1 (1-59)||(49901941-49901999)
chr1 (2-59)||(2125741-2125798)
chr1 (6-59)||(7190513-7190566)
chr1 (1-66)||(10160999-10161064)
chr1 (2-59)||(32213923-32213980)
chr1 (11-60)||(41492923-41492972)
chr1 (26-107)||(46296243-46296324)
chr1 (2-42)||(5945452-5945492)
chr1 (2-94)||(11385961-11386053)
chr1 (1-65)||(21268328-21268391)
chr1 (154-202)||(21356922-21356970)
chr1 (13-53)||(44286893-44286933)
chr1 (16-56)||(47466378-47466418)
chr1 (154-201)||(15390402-15390449)
chr1 (8-63)||(16691305-16691360)
chr1 (147-202)||(24241603-24241658)
chr1 (1-104)||(27935055-27935158)
chr1 (7-81)||(30222613-30222688)
chr1 (26-65)||(49559745-49559784)
chr1 (3-42)||(51046679-51046718)
chr1 (147-189)||(41725497-41725539)
chr1 (1-59)||(52396458-52396515)
chr1 (1-66)||(15444964-15445029)
chr1 (2-55)||(49508768-49508820)
chr1 (2-59)||(50154488-50154545)
chr1 (2-94)||(6170585-6170677)
chr1 (1-65)||(10832239-10832303)
chr1 (1-65)||(12381207-12381271)
chr1 (1-65)||(12385274-12385338)
chr1 (3-55)||(32268028-32268080)
[»] chr5 (54 HSPs)
chr5 (2-128)||(38610329-38610456)
chr5 (2-94)||(12914155-12914247)
chr5 (1-66)||(37243855-37243920)
chr5 (2-99)||(17168651-17168748)
chr5 (1-94)||(39167576-39167668)
chr5 (2-94)||(4422001-4422093)
chr5 (6-82)||(10163667-10163743)
chr5 (2-106)||(20184585-20184689)
chr5 (1-96)||(678428-678523)
chr5 (1-59)||(338800-338858)
chr5 (13-71)||(3242001-3242059)
chr5 (1-50)||(27823283-27823332)
chr5 (2-59)||(34546793-34546850)
chr5 (1-65)||(24288496-24288560)
chr5 (1-65)||(24373661-24373725)
chr5 (1-61)||(39069312-39069372)
chr5 (159-202)||(11774535-11774578)
chr5 (6-101)||(19894791-19894886)
chr5 (2-93)||(39567884-39567975)
chr5 (1-94)||(25017327-25017420)
chr5 (2-59)||(35653292-35653349)
chr5 (1-70)||(38632112-38632181)
chr5 (2-59)||(43414101-43414158)
chr5 (7-59)||(5058760-5058812)
chr5 (147-199)||(22472083-22472135)
chr5 (2-94)||(39692990-39693082)
chr5 (1-56)||(1759835-1759890)
chr5 (1-96)||(10406766-10406860)
chr5 (14-65)||(17605970-17606021)
chr5 (6-65)||(39335482-39335541)
chr5 (159-201)||(21239003-21239045)
chr5 (1-50)||(27535118-27535168)
chr5 (1-63)||(28996224-28996286)
chr5 (7-60)||(3015092-3015145)
chr5 (1-42)||(12068210-12068251)
chr5 (2-59)||(13951273-13951330)
chr5 (2-59)||(25568329-25568386)
chr5 (2-59)||(35945261-35945318)
chr5 (2-94)||(3639112-3639203)
chr5 (6-50)||(40099356-40099400)
chr5 (28-71)||(6823816-6823859)
chr5 (8-59)||(28143166-28143217)
chr5 (7-62)||(34278841-34278896)
chr5 (6-56)||(1446976-1447025)
chr5 (16-66)||(8454571-8454621)
chr5 (16-66)||(10979834-10979884)
chr5 (2-59)||(1479173-1479230)
chr5 (24-81)||(4293890-4293947)
chr5 (2-59)||(4962553-4962610)
chr5 (2-59)||(5151504-5151561)
chr5 (7-56)||(12349586-12349635)
chr5 (1-66)||(28599690-28599755)
chr5 (27-94)||(15915018-15915083)
chr5 (11-63)||(28992944-28992996)
[»] chr8 (47 HSPs)
chr8 (9-99)||(20212433-20212523)
chr8 (8-104)||(39972195-39972291)
chr8 (1-83)||(24304933-24305014)
chr8 (1-94)||(11295500-11295593)
chr8 (2-91)||(38869987-38870076)
chr8 (1-80)||(11332830-11332909)
chr8 (1-94)||(19389346-19389439)
chr8 (2-94)||(6433524-6433616)
chr8 (2-94)||(45337984-45338076)
chr8 (3-98)||(4308785-4308880)
chr8 (7-118)||(6396315-6396426)
chr8 (1-94)||(10694787-10694880)
chr8 (2-59)||(25249378-25249435)
chr8 (1-96)||(7532765-7532858)
chr8 (6-70)||(17319995-17320059)
chr8 (1-56)||(8018779-8018834)
chr8 (2-93)||(21016094-21016185)
chr8 (152-203)||(34173553-34173604)
chr8 (147-202)||(34514570-34514625)
chr8 (2-93)||(37433247-37433337)
chr8 (1-59)||(21016249-21016307)
chr8 (14-99)||(5300198-5300278)
chr8 (2-59)||(6939173-6939230)
chr8 (2-59)||(26195410-26195467)
chr8 (2-66)||(30351599-30351664)
chr8 (6-87)||(31639584-31639665)
chr8 (14-101)||(7444251-7444338)
chr8 (147-202)||(30208324-30208379)
chr8 (1-92)||(34713957-34714048)
chr8 (1-59)||(26892801-26892859)
chr8 (147-201)||(31333091-31333145)
chr8 (6-56)||(31596462-31596512)
chr8 (14-72)||(33741523-33741581)
chr8 (2-59)||(18068977-18069034)
chr8 (8-65)||(34421361-34421418)
chr8 (1-61)||(7473586-7473646)
chr8 (13-49)||(39491855-39491891)
chr8 (2-42)||(44874357-44874397)
chr8 (7-82)||(37922972-37923046)
chr8 (11-57)||(8210167-8210213)
chr8 (8-66)||(8810507-8810565)
chr8 (5-63)||(43285216-43285274)
chr8 (56-117)||(31554831-31554892)
chr8 (154-203)||(40719820-40719869)
chr8 (2-42)||(5129493-5129533)
chr8 (14-106)||(11264397-11264489)
chr8 (152-200)||(16782313-16782361)
[»] scaffold0144 (1 HSPs)
scaffold0144 (1-94)||(39569-39660)
[»] scaffold0289 (1 HSPs)
scaffold0289 (155-201)||(12397-12443)
[»] scaffold0101 (1 HSPs)
scaffold0101 (6-63)||(11088-11145)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-59)||(392169-392226)
[»] scaffold2122 (1 HSPs)
scaffold2122 (1-63)||(654-716)
[»] scaffold0169 (1 HSPs)
scaffold0169 (3-55)||(9046-9098)
[»] scaffold0161 (1 HSPs)
scaffold0161 (7-105)||(8773-8872)
[»] scaffold0062 (3 HSPs)
scaffold0062 (7-94)||(16813-16900)
scaffold0062 (7-94)||(26981-27068)
scaffold0062 (7-94)||(37147-37234)
[»] scaffold0045 (2 HSPs)
scaffold0045 (3-49)||(62616-62662)
scaffold0045 (3-49)||(69948-69994)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-63)||(97788-97849)


Alignment Details
Target: chr3 (Bit Score: 278; Significance: 1e-155; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 414
Target Start/End: Original strand, 34060802 - 34061214
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||     
T  34060802 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacaaactacttttaatttccttaacaagtgc 34060901  T
Q  101 ccttaaagcattggttaggaaaacccttnnnnnnnnntacttgtccatgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttc 200  Q
    | |||   |||||||||| |||||||||         |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34060902 cattaggacattggttagaaaaacccttaaaaaaaa-tacttgtctatgtttatgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttc 34061000  T
Q  201 tccgatatatagtatcaggtttctctctcatcatgcacatagtgtgcatgtgtgtatcatctgatctattagtacagaaaaatttaaccctaattttcat 300  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  34061001 tccggtatatggtatcaggtttctctttcatcatgcacatagtgtgcatgtgtgtatcatctcatctattagtacggaaaaatttaaccctaattttcat 34061100  T
Q  301 cgacaattaactatcgttgattaaaatttatagacaattgactaccgattaagttattttaatatttttgtagcgttttccatattcatttcatatggac 400  Q
    ||  ||||||||||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  34061101 cggtaattaactatcatcgattaaaatttataggcaattgactaccgattaggttattttaatatttttgtagtgttttccatactcatttcatatggac 34061200  T
Q  401 acaacaatattctt 414  Q
    |||||||| |||||    
T  34061201 acaacaattttctt 34061214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 18834 - 18912
Alignment:
Q  12 ggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaa 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||      |||||||||||||| ||||||||    
T  18834 ggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatccaatgt------actacttttgatttacttaacaa 18912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 18975 - 19053
Alignment:
Q  12 ggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaa 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||      |||||||||||||| ||||||||    
T  18975 ggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatccaatgt------actacttttgatttacttaacaa 19053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 45899595 - 45899672
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||| | |||||||||| |||||||||    
T  45899595 aaaagtgatgaatttaaatttttaaaagtcaaaatattgttgaattcaatgtaaacatactacttttggtttccttaa 45899672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 3304972 - 3305063
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    ||||| |||||| |||||||||||| |||||||||||| ||||||| || |||||||| |||||| ||||||| |||||||||||||||||||    
T  3304972 aaatgatgaaaaatgatgaatttaattttttaaaaattgaaatatt-ttaaattcaatataaatatactacttatgatttccttaacaagtgt 3305063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 8847489 - 8847581
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||| |  ||||||||| ||||||||||    
T  8847489 attggaaaatggtaaaaagtgattaatttaactttttaaaagttaaaatattgttgaaaacaatgtaaacatgctacttttggtttccttaac 8847581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 13647073 - 13647162
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttt---taaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttc 88  Q
    |||||||||| |||||||||||||||||||||||||   |||||||||||| ||||||||||||||| ||||   |||||||||| ||||    
T  13647073 attgaaaaatagtgaaaagtgatgaatttaactttttactaaaaattaaaacattgttgaattcaatataaacctactacttttggtttc 13647162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 34750294 - 34750357
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  34750294 attggaaactggtgaaaagtgatgaatttaactttttataaattaaaatattgttgaatccaat 34750357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 36730189 - 36730282
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||  ||||| ||| |  |||||||||  |||||||||    
T  36730189 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaac 36730282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 37509183 - 37509091
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| ||||| |||||||||||| ||||||||||||||||| | ||||||||||||||  ||||| |||||   ||||||||| |||||||||    
T  37509183 attggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaatatgttacttttgacttccttaac 37509091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 35306404 - 35306313
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    |||| |||||| ||||||||||| ||||||||||||||||| ||||||| || ||||| |||||| ||| |  ||||||||| |||||||||    
T  35306404 attggaaaatgatgaaaagtgataaatttaactttttaaaagttaaaatgttattgaaatcaatgcaaacatgctacttttggtttccttaa 35306313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 44695713 - 44695772
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| |||||||| ||||||    
T  44695713 aaaatggtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaatcaatg 44695772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 4759887 - 4759944
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  4759887 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 4759944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 51817349 - 51817406
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  51817349 attggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 51817406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 44570423 - 44570515
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||||||||||||||| | ||||||||||||||| | ||||| |||||||| |||||| ||| |  |||||||||  |||||||||    
T  44570423 attggaaaatggtgaaaagtgataactttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaacatgctacttttggcttccttaac 44570515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 51256123 - 51256202
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||| ||||| |||||||||||| | |||| ||||||||||||||| |||||| || ||||||| ||||||||||    
T  51256123 tgaaaagtgaagaatt-aactttttaaaagtcaaaacattgttgaattcaatataaatataccacttttggtttccttaac 51256202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 49976185 - 49976232
Alignment:
Q  9 aatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||    
T  49976185 aatggtgaaaagtgatgaatttaactttttaaaagtcaaaatattgtt 49976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 39974848 - 39974906
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  39974848 aaaatgatgagaagtgatgaatttaactttttaaaagttaaaatagtgttgaatccaat 39974906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41346048 - 41345990
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||| ||||||||| || ||||||| ||||||||| ||||||||||||||||    
T  41346048 tattgaaaaatagtgaaaagtaataaatttaattttttaaaagttaaaatattgttgaa 41345990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 52570855 - 52570797
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||| |||||||||||||||||| ||| ||||||||||||| | ||||||||||||||    
T  52570855 tattggaaaatggtgaaaagtgataaatataactttttaaaagtcaaaatattgttgaa 52570797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 8715538 - 8715595
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  8715538 attggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 8715595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 9067425 - 9067482
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  9067425 attggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 9067482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 11317033 - 11316980
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||| ||||||    
T  11317033 aaaatggtgaaaagttatgaatttaactttttaaaagtcaaaatattattgaat 11316980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12051111 - 12051018
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| |||||  |||||| |||| ||||||||||||||||||||||||| ||||||||  ||||| ||| |  |||||||||  |||||||||    
T  12051111 tattgtaaaataatgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaaacatgctacttttggcttccttaac 12051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 21324582 - 21324489
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    ||||| |||||||||||  |||||||||||||||| ||||||||||||||||| | ||| ||  | | |||||||  |||| ||||||||||||    
T  21324582 aaatgatgaaaagtgatagatttaactttttaaaagttaaaatattgttgaatccgatgcaatcatattacttttagtttctttaacaagtgtc 21324489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29213396 - 29213461
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||||||||||||||||| ||||  |||| ||||||||||| |||||| |||| |||||||||||    
T  29213396 tattgaaaaatggtgaaaaatgatagatttgactttttaaaagttaaaaaattgctgaattcaatg 29213461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11675384 - 11675287
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    |||||||||||||| |||  ||| |||||||||||||||||  | ||||||||||||||| |||||  ||   || ||||||| ||||||||||||||||    
T  11675384 tattgaaaaatggtaaaa--tgacgaatttaactttttaaatgtcaaaatattgttgaatccaatgctaacctaccacttttggtttccttaacaagtgt 11675287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 25102359 - 25102450
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||||| ||||||||| |||| || ||||| ||| ||||||||||||||||  ||||| |||||  ||||||||| ||||||||||    
T  25102359 attggaaaatggtaaaaagtgataaatt-aatttttttaaagttaaaatattgttgaaaccaatgcaaatatgctacttttggtttccttaac 25102450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 32415641 - 32415549
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||| ||||||||| || ||||||||||||||||| | ||||| ||||||||  ||||| ||| |   |||||||| ||||||||||    
T  32415641 attgaaaaattgtgaaaagtcataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggtttccttaac 32415549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 2008525 - 2008580
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||| |||||| ||||||||||||| ||||||| ||||||||| ||||||||||||    
T  2008525 atgtgtgtgtggccaaacactatttctttggtcctgtgaccatattagaatttctc 2008580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 10854931 - 10854840
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    |||| ||||||||||||| | || ||||||||||||||||| ||||||| ||||||||  ||||| ||| |  |||||||||  ||||||||    
T  10854931 attggaaaatggtgaaaactaataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaa 10854840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4542389 - 4542487
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    |||| ||| ||| |||||| |||||||||| ||||||||||| || |||||||||||||| ||||| |||   |||| ||||| ||| |||| ||||||    
T  4542389 tattaaaagatgatgaaaaatgatgaatttgactttttaaaagtttaaatattgttgaatccaatggaaacctactatttttggttttcttagcaagtg 4542487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 25199073 - 25199123
Alignment:
Q  152 tgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||||||||||||||| ||| ||||||| ||||||||| ||||||||||||    
T  25199073 tgtgtgaccaaacactttttctttggtcctgtgaccatattagaatttctc 25199123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 26850536 - 26850582
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatatt 53  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  26850536 aaaatggtaaaaagtgatgaatttaattttttaaaagttaaaatatt 26850582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 39170955 - 39170905
Alignment:
Q  152 tgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||||||||||||| ||||| |||| |||||||||||| ||||||||||||    
T  39170955 tgtgtgaccaaacattatttatttgatcttgtgaccatattagaatttctc 39170905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 50420742 - 50420692
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||||||||  |||||||||||||||| |||||| ||||||||||||||||    
T  50420742 aaaagtgatagatttaactttttaaaagttaaaaaattgttgaattcaatg 50420692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12060095 - 12060160
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||| |||||| |||||||||||  |||| | ||||||||| |||||| ||||||||||||||||    
T  12060095 tattggaaaatgatgaaaagtgatagatttgagtttttaaaagttaaaaaattgttgaattcaatg 12060160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 20227417 - 20227474
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||| ||||||||||| |||||||||| |||||| ||||||| || |||||    
T  20227417 attgaaaaatgatgaaaagtgataaatttaacttcttaaaagttaaaatgttattgaa 20227474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 1994829 - 1994781
Alignment:
Q  154 tgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  1994829 tgtgaccaaatactatttctttggtcatgtgaccatattagaatttctc 1994781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 4298406 - 4298362
Alignment:
Q  5 gaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaa 49  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  4298406 gaaaaatggtgaaaagtgatagatttgactttttaaaaattaaaa 4298362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 8498075 - 8498131
Alignment:
Q  5 gaaaaatggtgaaaagtgatgaatttaactttt-taaaaattaaaatattgttgaat 60  Q
    |||||||||||||||| | ||||||||||||||  ||||| ||||||||||||||||    
T  8498075 gaaaaatggtgaaaagcgttgaatttaacttttgaaaaaaataaaatattgttgaat 8498131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 45805503 - 45805455
Alignment:
Q  154 tgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||||||||||||| ||| ||||||| ||||||||| ||||||||||||    
T  45805503 tgtgaccaaacactttttatttggtcatgtgaccatattagaatttctc 45805455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 32070720 - 32070681
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  32070720 ttgaaaagtggtgaaaagtgatgaattcaactttttaaaa 32070681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 35069657 - 35069703
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    ||||||||||||||||||| ||||||||| || ||||||| ||||||    
T  35069657 tgaaaagtgatgaatttaaatttttaaaagtttaaatattattgaat 35069703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39436538 - 39436497
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    ||||||||||||||||||| | | ||||||||||||||||||    
T  39436538 tattgaaaaatggtgaaaaataaagaatttaactttttaaaa 39436497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 46160575 - 46160526
Alignment:
Q  11 tggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    |||||||||||||||||| |||||||| |||  |||||| ||||||||||    
T  46160575 tggtgaaaagtgatgaatgtaacttttaaaaggttaaaaaattgttgaat 46160526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 46317558 - 46317501
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||| |||||| |||| ||||||||||||||||| | ||||| ||||||||    
T  46317558 attggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaa 46317501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 12905324 - 12905376
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||||| |||| |||||||| |||||||| | ||||| ||||||||    
T  12905324 aaaatggtgaaaaatgataaatttaacattttaaaagtcaaaatgttgttgaa 12905376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 15502674 - 15502726
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgt 55  Q
    |||||||||||| |||| || |||||| |||||||||||| |||||| |||||    
T  15502674 ttgaaaaatggtaaaaaatgttgaattcaactttttaaaagttaaaaaattgt 15502726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 31647364 - 31647284
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||| |||| ||||||||||||||||| | ||||| || ||||| |||||| ||| |  |||||||||  |||||||||    
T  31647364 tgaaaaatgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaacatgctacttttggcttccttaac 31647284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 48313881 - 48313933
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    ||||||||||||| ||  ||||| ||||||||||||| |||| ||||||||||    
T  48313881 aaatggtgaaaagcgaaaaatttgactttttaaaaatcaaaacattgttgaat 48313933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 35675233 - 35675350
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtccttaaa 107  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||||||||| ||||||||||| | ||||     
T  35675233 aaatagtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacatactacttttgattttcttaacaagtgcctttaag 35675332  T
Q  108 gcattggttaggaaaacc 125  Q
    ||||||||||| ||||||    
T  35675333 gcattggttagcaaaacc 35675350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 51018416 - 51018508
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| |||||    
T  51018416 attgaaaaatggtgaaaagtgaagaatttaactttttaaaaattaaaacattgttgaattcaatgtaaatatactacttttaatttctttaac 51018508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 39158373 - 39158460
Alignment:
Q  12 ggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    |||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  39158373 ggtgaaaagtgatctatttaactttttaaaaattaaaatattgttcaattcaatgtaaacatactacttttgatttccttaacaagtg 39158460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 966654 - 966556
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    ||||||||||| | |||| | |||||||||||||||||||||||||||||||||||||| ||||| |||   |||||||||||||||||||||||||||    
T  966654 attgaaaaatgataaaaaattatgaatttaactttttaaaaattaaaatattgttgaatccaatgaaaaactactacttttgatttccttaacaagtgt 966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 20456642 - 20456550
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    |||||||||||| |||||||| |||||||||| ||||||||  ||||||||||||||||||||||| ||| |  |||||||||||||||||||    
T  20456642 tattgaaaaatgatgaaaagttatgaatttaaatttttaaatgttaaaatattgttgaattcaatgcaaacatgctacttttgatttccttaa 20456550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36486722 - 36486814
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    ||||| ||||||||||||||||| |||||||| ||||||||| | |||||||| |||||||| ||||||||| | ||| ||||||||||||||    
T  36486722 tattggaaaatggtgaaaagtgaagaatttaattttttaaaagtcaaaatattattgaattctatgtaaatatattacgtttgatttccttaa 36486814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 3769885 - 3769802
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgat 85  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||| |||   ||||||||||||    
T  3769885 attgaaaaatggtgaaaagtgataaatttgactttttaaaagttaaaatattgttaaattcaatgcaaacctactacttttgat 3769802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 23260777 - 23260678
Alignment:
Q  2 attgaaaaatggtgaaaag-tgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    ||||| ||||||||||||| |||||||||||||||||||||| |||||||||| || |||||||| |||||  ||| |||||| |||| |||||||||||    
T  23260777 attgagaaatggtgaaaagctgatgaatttaactttttaaaagttaaaatattattaaattcaatttaaatttacttcttttggtttctttaacaagtgt 23260678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 52341668 - 52341569
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtccttaa 106  Q
    |||||| |||||| |||||||||||||||||||||| | ||||| ||||||||| ||||| ||| | |||| ||||| ||||||||||||||||| ||||    
T  52341668 aaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatgcaaacatactaattttggtttccttaacaagtgtctttaa 52341569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 31494704 - 31494790
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||| |||||||||||||||||    |||| |||||||||||||||||||||| | |||||||| ||||||||||    
T  31494704 aaatggtgaaaagtgaagaatttaactttttaaatgacaaaacattgttgaattcaatgtaaatatattacttttggtttccttaac 31494790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15986339 - 15986246
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||||||||| ||||||||| ||||||||| | | ||||||||||||||||||| ||| |  ||||||||  ||||||||||    
T  15986339 tattgaaaaatggtgaaaagtggtgaatttaaatttttaaaagtcagaatattgttgaattcaatgcaaacattctacttttagtttccttaac 15986246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 23690972 - 23691048
Alignment:
Q  18 aagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||| ||||||||| |||||||||| |||| |||||||||||||||||||||| |||| ||||| ||||||||||    
T  23690972 aagtgaagaatttaaccttttaaaaatcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaac 23691048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 31755010 - 31754918
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||  ||||| ||| |  |||||||||| |||||||||    
T  31755010 attgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgacttccttaac 31754918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 50514650 - 50514742
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||  ||||| ||| |  ||||||||| ||||||||||    
T  50514650 attgaaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggtttccttaac 50514742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 51266997 - 51266905
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| |||||||| |||||  ||| |  |||||||||| ||||||||    
T  51266997 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatacaaacatgctacttttgacttccttaa 51266905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 46823545 - 46823450
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaa 96  Q
    ||||| ||||||||||||||| |||||||||||||||||||| | |||| |||||||| |||||||| ||   |||| ||||| ||||||||||||    
T  46823545 tattggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaaaattgttgatttcaatgtcaacctactatttttggtttccttaacaa 46823450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 23765650 - 23765549
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    |||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||  ||||| ||| |  ||||||||   ||||||||||| ||||    
T  23765650 attggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttccttaacaattgtc 23765551  T
Q  102 ct 103  Q
    ||    
T  23765550 ct 23765549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26040396 - 26040489
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| |||||||||||||||||| | ||||||||||||||| | ||||||||||||||  ||||| |||||  |||||||||  |||||||||    
T  26040396 tattggaaaatggtgaaaagtgataagtttaactttttaaaagtcaaaatattgttgaagccaatgcaaatatgctacttttggcttccttaac 26040489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 30475498 - 30475405
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||  ||||| ||| | | ||||||||  |||||||||    
T  30475498 tattgaaaaatggtgaaaagtgataaatttaactttttaaatgtcaaaatattgttgaaaccaatgcaaacatattacttttggcttccttaac 30475405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 34016697 - 34016633
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||| |||||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||||    
T  34016697 attggaaaatggtgaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaaatcaatg 34016633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 54339184 - 54339093
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||||| |||| ||||||| ||||||||| | |||||||| |||||  |||||||||||  |||||||||| |||||||||    
T  54339184 attgaaaaatggtgaaaa-tgataaatttaattttttaaaagtcaaaatatttttgaaaccaatgtaaatatgctacttttgacttccttaac 54339093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29462874 - 29462772
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    |||||||||||| |||||| ||| |||||| | ||||| ||| | ||||| ||||||||| ||||||||| | | || ||| ||||||||||||||||||    
T  29462874 tattgaaaaatgatgaaaaatgaggaattttattttttcaaagtcaaaatgttgttgaatccaatgtaaacatattaatttcgatttccttaacaagtgt 29462775  T
Q  101 cct 103  Q
    |||    
T  29462774 cct 29462772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33951773 - 33951715
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  33951773 tattggaaaattgtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaa 33951715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 1457586 - 1457663
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    |||| |||| ||||||| ||||||||| ||||||||||||||||||||||| |||   | ||||||||||||||||||    
T  1457586 aaaattgataaatttaattttttaaaagttaaaatattgttgaattcaatgcaaacttattacttttgatttccttaa 1457663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31010463 - 31010556
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||| ||||| | |||||||| |||||||||||||||||| | |||| |||| ||||||  |||||||||  ||||||||||||| ||||||    
T  31010463 tattgagaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgctgaattatatgtaaatatgctacttttgattttcttaac 31010556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 35927316 - 35927369
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  35927316 aaaatggtgaaaaacgatgaatttaactttttaaaagttaaaatattgttgaat 35927369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 48513692 - 48513599
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||| ||||||||||   |||||||||||||||| | |||| |||||||||||||||| || || || | ||||| ||||||||||    
T  48513692 tattgaaaaatgatgaaaagtgaaagatttaactttttaaaagtcaaaacattgttgaattcaatgcaagtataccaattttggtttccttaac 48513599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 55120164 - 55120072
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||| ||||||| ||| |||||| ||||||||||| | |||| ||||||||||||||  |||||| |||| ||||||||| ||||||    
T  55120164 tattgaaaaatagtgaaaaatgaagaatttgactttttaaaagtcaaaacattgttgaattcaacataaatatacta-ttttgattttcttaac 55120072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 19328965 - 19329057
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||||||||| ||||| ||||||||||||||||| | ||||||||||||||  ||||| ||| |  |||||||||  |||||||||    
T  19328965 attggaaaatggtgaaatgtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgccttccttaac 19329057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 30199823 - 30199891
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaa 70  Q
    ||||||||||| | |||||||||||| |||| ||||||||| |||||||||| |||||| |||||||||    
T  30199823 attgaaaaatgataaaaagtgatgaaattaattttttaaaagttaaaatattattgaatccaatgtaaa 30199891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3472196 - 3472098
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    |||| ||||||||||| ||||| ||||||||||||||||||| |||||| |||||| |||| ||| |||       ||||||||||| ||||||||||||    
T  3472196 tattaaaaaatggtgacaagtgttgaatttaactttttaaaagttaaaacattgttaaatttaatataa-------acttttgattttcttaacaagtgt 3472104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 13966631 - 13966528
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    |||| |||||||| |||| | |||||||| ||||||||||| || | |||||||||||| |||||||| |  |||| ||||| |||||||||||| || |    
T  13966631 attggaaaatggtaaaaaataatgaatttgactttttaaaagttgacatattgttgaatccaatgtaactctactatttttggtttccttaacaaatgcc 13966532  T
Q  102 ctta 105  Q
    ||||    
T  13966531 ctta 13966528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 30618015 - 30617924
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    ||||| |||||||  |||||||||||||||||||| || |||||||||||||| ||||| ||    |||||||||| ||||||||| |||||    
T  30618015 aaatgatgaaaagcaatgaatttaactttttaaaagttcaaatattgttgaatccaatgcaatcctactacttttggtttccttaataagtg 30617924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 46550687 - 46550632
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  46550687 atgtgtgtgtgaccaaacactttttctttggtcttgtgaccatattagaatttctc 46550632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26831822 - 26831880
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||| |||||||| ||||||||| |||||| |||||||||||||||||| ||||||||    
T  26831822 tattgtaaaatggtaaaaagtgataaatttatctttttaaaaattaaaatgttgttgaa 26831880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 45688815 - 45688689
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    ||||||||||| ||||||||||| ||||||||||||||||| | ||||| ||||||||   |||| ||| |  |||||||||  ||||||||| | || |    
T  45688815 attgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttggcttccttaactattgcc 45688716  T
Q  102 cttaaagcattggttaggaaaaccctt 128  Q
    || || ||| ||||||| || ||||||    
T  45688715 ctgaatgcaatggttagcaagaccctt 45688689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 10567322 - 10567379
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||||| ||||||||| |||| |||||||||||||||||| |||||| ||||||||    
T  10567322 aaatggtggaaagtgatggatttgactttttaaaaattaaaaaattgttaaattcaat 10567379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 32584561 - 32584614
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    |||||||| |||||| ||||||| |||||||||||| |||||||||||||||||    
T  32584561 aaaatggtaaaaagtaatgaattcaactttttaaaagttaaaatattgttgaat 32584614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 34316759 - 34316852
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaa-tttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||| |||||||||||| || ||||||||||||||| | ||||||||||||||  ||||| ||| |  |||||||||  |||||||||    
T  34316759 attgaaaaatagtgaaaagtgataaaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaac 34316852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 52895797 - 52895704
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||| |||| |||||||||||  | ||||||||||||||| | |||| ||  ||||| |||||||||||| ||||| |||| ||||||||||    
T  52895797 tattgagaaattgtgaaaagtgaaaattttaactttttaaaagtcaaaacatgcttgaactcaatgtaaatatactacatttggtttccttaac 52895704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 3684620 - 3684529
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    |||||| ||||| |||||| |||| |||||||||||||||||| ||||| ||| ||||||||||| |||| | | |||||||| ||| |||||    
T  3684620 tattgagaaatgatgaaaaatgatcaatttaactttttaaaaa-taaaaaattattgaattcaatataaacataatacttttggttttcttaa 3684529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 27544577 - 27544481
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    ||||||||||| | ||||||||||||||| | ||||||||| |||||||||||||||||   ||  ||||  |||||||||||||| || ||||||||||    
T  27544577 attgaaaaatgat-aaaagtgatgaatttgaatttttaaaagttaaaatattgttgaat--gatacaaatctactacttttgattttctaaacaagtgtc 27544481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35511216 - 35511264
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaa 49  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  35511216 tattggaaaatggtgaaaagtgatgaatttgactttttaaaagttaaaa 35511264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 40593667 - 40593584
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttcctta 92  Q
    |||| ||||||||||||||||||||| |||||||| | | ||| ||||| |||||||||||||   |||||||||||| ||||||    
T  40593667 aaatagtgaaaagtgatgaatttaac-ttttaaaagtcataatgttgtttaattcaatgtaaaattactacttttgatctcctta 40593584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 21760643 - 21760544
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    |||| |||||| || |||| ||||  ||||||||||| ||||||||||| ||| || ||||||||||||||  || |||||| ||||| ||||| |||||    
T  21760643 tattaaaaaatagtaaaaaatgatagatttaacttttgaaaaattaaaaaattattaaattcaatgtaaatttaccacttttaatttctttaactagtgt 21760544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 27545934 - 27545876
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaacttttt-aaaaattaaaatattgttgaat 60  Q
    ||||||||||| | ||||||||||||||||||||||| |||| |||||||||||||||||    
T  27545934 attgaaaaatgat-aaaagtgatgaatttaactttttgaaaacttaaaatattgttgaat 27545876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 20811335 - 20811254
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttg 83  Q
    |||| ||| |||||||||||||| ||||||||||||||||| | ||||| ||||| || |||||| ||| |  |||||||||    
T  20811335 attggaaattggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttaaaatcaatgcaaacatgctacttttg 20811254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 31168206 - 31168125
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttg 83  Q
    |||| |||||||||||||||||| ||||||| ||||| ||| | ||||| ||||||||  ||||||||| |  |||||||||    
T  31168206 attggaaaatggtgaaaagtgataaatttaatttttttaaagtcaaaatgttgttgaaaccaatgtaaacattctacttttg 31168125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 35808433 - 35808534
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    |||| ||||| ||||||| |||| ||||||||||||||||| | ||||| ||||||||  ||||| ||| |  |||||||||  ||||||||| | ||||    
T  35808433 attggaaaattgtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgtc 35808532  T
Q  102 ct 103  Q
    ||    
T  35808533 ct 35808534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47188701 - 47188794
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| |||||||||||||||||| |||||||||| | |||| | ||||| ||||||||  ||||| ||| |  |||||||||  |||||||||    
T  47188701 tattggaaaatggtgaaaagtgataaatttaacttctaaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaac 47188794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 1801668 - 1801613
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaa 64  Q
    |||||||||||||| || ||||||||||||| ||| |||||||||| ||||||||||    
T  1801668 aaatggtgaaaagttataaatttaacttttt-aaagttaaaatatttttgaattcaa 1801613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 2362704 - 2362609
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaa--ctttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| |||||||||||||||||| |||||||   ||||||||| | ||||| ||||| ||  ||||| ||| | ||||||||||| |||||||||    
T  2362704 tattggaaaatggtgaaaagtgataaatttaattttttttaaaagtcaaaatgttgttaaaaccaatgcaaacatactacttttgacttccttaac 2362609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 10100155 - 10100207
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||||||| || ||||||||||||||||| | ||||| ||||||||    
T  10100155 aaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgttgaa 10100207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 41844233 - 41844169
Alignment:
Q  138 tacttgtccatgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||||||  |||| |||||||||||| ||| |||||  |||||||||| ||||||||||||||||    
T  41844233 tacttgtttatgtgtgtgtgaccaaatactttttgtcgggtcttgtgaacatgttagaatttctc 41844169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 41956250 - 41956342
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||| |||||| |||| ||||||||||||||||| | ||||| ||||||||  ||||| ||| |  |||||||||  |||||||||    
T  41956250 attggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaagccaatgcaaacatgctacttttgccttccttaac 41956342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 49483170 - 49483106
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    ||||| ||||||||||||||||||  |||| ||||||| ||| |||||| ||| |||||||||||    
T  49483170 tattggaaaatggtgaaaagtgatagatttgactttttcaaagttaaaaaattattgaattcaat 49483106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 55669811 - 55669719
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| ||||||||||||| |||| ||||||||||||||||| | ||||| ||||| ||  ||||| ||| |  |||||||||  |||||||||    
T  55669811 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttaaaaacaatgcaaacatgctacttttggcttccttaac 55669719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 25928497 - 25928454
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||||||||||| |||||||  ||||||||||||||||    
T  25928497 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 25928454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 41464789 - 41464730
Alignment:
Q  144 tccatgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctcc 203  Q
    ||||||| |||||||||||||||||||| ||| ||| ||| ||||| ||| |||||||||    
T  41464789 tccatgtgtgtgtgaccaaacactatttctttagtcctgtaaccatattataatttctcc 41464730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 47541792 - 47541737
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||| |||||||||||||||| ||| |||| ||| |||||||| ||||||||||||    
T  47541792 atgtgtgtgtgaccaaacactttttctttgatctcgtgaccatattagaatttctc 47541737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 20435832 - 20435874
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaa 49  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||    
T  20435832 aaaattgtgaaaagtgaagaatttaactttttaaaaatcaaaa 20435874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 29722119 - 29722161
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaatt 45  Q
    |||||| |||||||||| |||||||||||||||||| ||||||    
T  29722119 ttgaaatatggtgaaaaatgatgaatttaactttttcaaaatt 29722161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 32131215 - 32131157
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||| |||||||||| ||||||| ||||||||||||||||| | || || ||||||||    
T  32131215 tattggaaaatggtgataagtgataaatttaactttttaaaagtcaagatgttgttgaa 32131157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 45088139 - 45088050
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||| ||||||||||| ||||||| ||||| ||| | ||||   ||||||| |||||| ||| | |||||||||| ||||||||||    
T  45088139 attggaaaatgatgaaaagtgataaatttaattttttgaaagtcaaaa---tgttgaaatcaatgcaaacatactacttttggtttccttaac 45088050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 52021104 - 52021046
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    |||||||||  || |||| |||| ||||||||||||||||  |||||||||||||||||    
T  52021104 attgaaaaactgtaaaaaatgataaatttaactttttaaatgttaaaatattgttgaat 52021046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 40436149 - 40436096
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||| |||||| | || |||||||||||||||| || ||||||||||||||    
T  40436149 aaaaatgatgaaaaataataaatttaactttttaaatatcaaaatattgttgaa 40436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 52937289 - 52937346
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||||||||| | ||||||||||| |||||||| |||| | |||||| ||||||||    
T  52937289 aaatggtgaaaaataatgaatttaacattttaaaagttaataaattgttaaattcaat 52937346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 53484688 - 53484619
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaa 70  Q
    |||||||||||||  ||||  ||||||||||||||| ||||| ||||||| |||| |||| |||| ||||    
T  53484688 tattgaaaaatgggaaaaaaagatgaatttaactttctaaaagttaaaatgttgtggaatccaatataaa 53484619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 13498174 - 13498222
Alignment:
Q  22 gatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaa 70  Q
    ||||||||||||||||||||| | ||||  ||||||||| |||||||||    
T  13498174 gatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaa 13498222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 42627142 - 42627189
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    |||||||||| | |||||||||||||||||| |||||||||| ||||||    
T  42627142 aaatggtgaagaatgatgaatttaacttttt-aaaattaaaaaattgtt 42627189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44478774 - 44478714
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatt 61  Q
    ||||| ||||| ||||||| | ||| |||||||||||||||| | |||| |||||||||||    
T  44478774 tattggaaaattgtgaaaaataatggatttaactttttaaaagtaaaaaaattgttgaatt 44478714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 8e-34; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11659335 - 11659242
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  11659335 tattgaaaaatagtgaaaagtgaagaatttaactttttaaaaattaaaatattgttgaattcaatgtaaatatactgcttttggtttccttaac 11659242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 2239652 - 2239551
Alignment:
Q  4 tgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcct 103  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||| ||||  ||||| |||||||||| | | |||||||||||| ||    
T  2239652 tgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaatattgttgaatccaatacaaatatactacttttggtattcttaacaagtgttct 2239553  T
Q  104 ta 105  Q
    ||    
T  2239552 ta 2239551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 10900287 - 10900378
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    ||||||||||| | ||||||||||||||| | ||||||||| |||||||||| |||||||||||||||||| |||| |||||||||| ||||    
T  10900287 attgaaaaatgataaaaagtgatgaattttattttttaaaagttaaaatattattgaattcaatgtaaatatactatttttgatttcattaa 10900378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 12695286 - 12695366
Alignment:
Q  13 gtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||| ||||||||||    
T  12695286 gtgaaaagtaaagaatttaactttttaaaaatcaaaacattgttgaattcaatgtaaatatactatttttg-tttccttaac 12695366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 13997941 - 13998004
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  13997941 attgaaaaattgtgaaaaatgataaatttaactttttaaaaattaaaatattgttgaaatcaat 13998004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 27495190 - 27495103
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||||| |||||||| |||||||||| ||||| ||||||||  ||||| ||| | ||||||||||| |||||||||    
T  27495190 aaaatggtgaaaagtgataaatttaacattttaaaaatcaaaatgttgttgaaaccaatgcaaacatactacttttgacttccttaac 27495103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 33726453 - 33726360
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||||||||| | || ||||||||||| ||||| |||||||||||||||| |||||  ||| |  ||| ||||||||||||||||    
T  33726453 tattgaaaaatggtgaaaaataataaatttaactttctaaaagttaaaatattgttgaaatcaatacaaacatgctatttttgatttccttaac 33726360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 9009115 - 9009163
Alignment:
Q  154 tgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9009115 tgtgaccaaacactatttgtttggtcttgtgaccatattagaatttctc 9009163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 747527 - 747592
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||| ||||| ||||||||||||  |||||||||||||||| |||||| ||||||||||||||||    
T  747527 tattggaaaatagtgaaaagtgatagatttaactttttaaaagttaaaaaattgttgaattcaatg 747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 44299721 - 44299810
Alignment:
Q  5 gaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||||||| |||||||| |||||||| | ||||||||||||||  ||||||||  | |||| |||||  |||||||||    
T  44299721 gaaaaatggtgaaaagtgataaatttaacattttaaaagtcaaaatattgttgaaaccaatgtaagcatactatttttggcttccttaac 44299810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 17095107 - 17095195
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||  ||||| |||||  ||| |||||  |||||||||    
T  17095107 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctatttttgcattccttaac 17095195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 34220692 - 34220740
Alignment:
Q  11 tggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  34220692 tggtgaaaagtgatgaatttaagtttttaaaagttaaaatattgttgaa 34220740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 34392589 - 34392678
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaaca 95  Q
    |||| |||||||| |||| ||| |||||||| ||||||||| | ||||    ||||||||||||||||||| |||||||||| |||||||||||    
T  34392589 attggaaaatggttaaaaatgaagaatttaattttttaaaagtcaaaa----gttgaattcaatgtaaatatactacttttggtttccttaaca 34392678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 40798372 - 40798448
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttcct 90  Q
    |||||||||| | |||||||||||||||| | |||| ||||||||||||||||||| || || ||||||| ||||||    
T  40798372 tgaaaagtgaaggatttaactttttaaaagtcaaaacattgttgaattcaatgtaagtataccacttttggtttcct 40798448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9201531 - 9201589
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| ||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  9201531 tattaaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 9201589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 35445327 - 35445385
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaacttttt-aaaaattaaaatattgttgaa 59  Q
    ||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||    
T  35445327 attgaaaaatggtgaaaagtgataaatttaactttttcaaaagtcaaaatattgttgaa 35445385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6999275 - 6999182
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| ||||||||||||| |||| ||||||||||||||||| | ||||| ||||||||  ||||| ||| |  |||||||||  |||||||||    
T  6999275 tattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaac 6999182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 15004987 - 15004942
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  15004987 tgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaa 15004942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 33849059 - 33848966
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||| ||||||||||||   | |||||||||||||||||| | |||  ||||||||||| ||| |||||| | |||||||| ||||||||||    
T  33849059 tattgataaatggtgaaaaaccaagaatttaactttttaaaagtcaaaccattgttgaatttaatataaatatattacttttggtttccttaac 33848966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 39401572 - 39401628
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  39401572 attgaaaaatggtgaaaagtgat-aatttaactttttaaaagtcaaaattttgttgaa 39401628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 41436551 - 41436458
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||| ||||||||||| || |||||||||||||| | ||||| ||||||||  ||||| ||| |  |||||||||| ||| |||||    
T  41436551 tattgaaaaatgatgaaaagtgataaacttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttcattaac 41436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 44173191 - 44173134
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||| |||||| |||| ||||||| ||||||||||||||||| ||||||||    
T  44173191 attgaaaaatgatgaaaaatgataaatttaattttttaaaaattaaaatgttgttgaa 44173134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 862662 - 862570
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    ||||| |||||||||||||||||| ||||||||||||||| | | ||||| ||||||||  ||||| ||| |  |||||||||  ||||||||    
T  862662 tattggaaaatggtgaaaagtgataaatttaactttttaagagtcaaaatcttgttgaaaccaatgcaaacatgctacttttggcttccttaa 862570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 2966612 - 2966532
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactactttt 82  Q
    |||| |||||||||||||||||| ||||||| ||||||||| | ||||| ||||||||  ||||| |||||  ||||||||    
T  2966612 attggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctactttt 2966532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 17056098 - 17056186
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||||||||| |||||||||||||||||   ||||| ||||||||  ||||| |||||  ||| |||||  |||||||||    
T  17056098 aaaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaaaccaatgcaaatatgctatttttggcttccttaac 17056186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 17068545 - 17068633
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||||||||| |||||||||||||||||   ||||| ||||||||  ||||| |||||  ||| |||||  |||||||||    
T  17068545 aaaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaaaccaatgcaaatatgctatttttggcttccttaac 17068633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 39085829 - 39085921
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||| | ||||||||| ||||||||||||||||| | ||||| |||||||| |||||| ||| |  || ||||||| |||||||||    
T  39085829 attggaaaatgataaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaacatgctgcttttgacttccttaac 39085921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 3870158 - 3870209
Alignment:
Q  152 tgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctcc 203  Q
    |||||||||||||||| ||| ||||||| ||||||||| |||||||||||||    
T  3870158 tgtgtgaccaaacactttttctttggtcctgtgaccatattagaatttctcc 3870209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 14120864 - 14120963
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtccttaa 106  Q
    ||||||||||||||||||  ||||| |||||||| | |||||| |||||| |||||||| |||||  || | ||||  |||||||||| | |||||||||    
T  14120864 aaaatggtgaaaagtgatagatttagctttttaatagttaaaaaattgttaaattcaatataaatttaccatttttagtttccttaactaatgtccttaa 14120963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 29260170 - 29260229
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||||||||||||||||  |||| |||||| |||| |||||| ||||||||||||||||    
T  29260170 aaaatggtgaaaagtgatagatttgacttttaaaaagttaaaaaattgttgaattcaatg 29260229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 33864427 - 33864357
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaata 72  Q
    |||| ||||||||||||||| || |||||||| |||||||| | ||||||||||||||  ||||| |||||    
T  33864427 attggaaaatggtgaaaagtaataaatttaacattttaaaagtcaaaatattgttgaaaccaatgcaaata 33864357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 34512713 - 34512655
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    ||||||||||||||||||  |||| ||||||||||| |||||| |||||| ||||||||    
T  34512713 aaaatggtgaaaagtgatagatttgactttttaaaagttaaaaaattgttaaattcaat 34512655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 765187 - 765244
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| ||||| |||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  765187 attggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 765244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 2136508 - 2136411
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    |||| |||||| |||||||||  |||||| |||||| |||| | ||||||||||||||| ||||  |||   |||| ||||| |||||||||||||||    
T  2136508 attggaaaatgatgaaaagtggagaatttgacttttgaaaagtgaaaatattgttgaatacaatacaaacctactaattttggtttccttaacaagtg 2136411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5671602 - 5671485
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    |||||| |||||||||||||||||  |||| |||||| |||| |||||| ||| ||||||| |||| |||   || | |||| ||||||||||| ||||     
T  5671602 tattgagaaatggtgaaaagtgatagatttgacttttaaaaagttaaaaaattcttgaattgaatgcaaacttaccattttttatttccttaactagtgc 5671503  T
Q  101 ccttaaagcattggttag 118  Q
    | |||  |||||||||||    
T  5671502 cattagggcattggttag 5671485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 17074528 - 17074581
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||||||||||| |||||||||||||||||   ||||| ||||||||    
T  17074528 aaaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaa 17074581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23685688 - 23685753
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||| ||||||| |||||||||| ||||||||||||||||| | ||||| || ||||| ||||||    
T  23685688 tattggaaaatggggaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaatcaatg 23685753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 32949565 - 32949520
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaatt 61  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||    
T  32949565 aaaaatgatgaatttgactttttaaaaattaaaatattgttaaatt 32949520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 34334203 - 34334292
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaa 96  Q
    |||||||| |||| |||  |||| ||||||||| |||||||||||||||||||| ||||  ||| |  ||||||||  ||||||||||||    
T  34334203 aaaatggtaaaaaatgacaaattaaactttttacaaattaaaatattgttgaatccaatacaaacatgctacttttagtttccttaacaa 34334292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 34480103 - 34480054
Alignment:
Q  154 tgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctcc 203  Q
    |||||||||||||| ||| ||||||| ||||||||| |||||||||||||    
T  34480103 tgtgaccaaacactttttctttggtcctgtgaccatattagaatttctcc 34480054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 41890182 - 41890251
Alignment:
Q  36 tttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcctta 105  Q
    ||||||| ||||||||||||||||| ||||| |||   |||||||||| |||||||||||| || |||||    
T  41890182 tttaaaagttaaaatattgttgaatccaatgcaaacctactacttttggtttccttaacaaatgccctta 41890251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 2958515 - 2958607
Alignment:
Q  11 tggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcct 103  Q
    ||||||||||| |||||||||||||||||||| ||  || |||||    |||||||||||   |||| ||||  |||||||||||||||||||    
T  2958515 tggtgaaaagttatgaatttaactttttaaaagtttgaaaattgtatttttcaatgtaaaactactatttttagtttccttaacaagtgtcct 2958607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3454734 - 3454797
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||| ||| ||||| ||||||||| | ||||||||||||||| | ||||||||||||||||||||    
T  3454734 tattaaaagatggtaaaaagtgataactttaactttttaaaagt-aaaatattgttgaattcaat 3454797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37230293 - 37230253
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaa 41  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  37230293 tattgaaaaatggtgaaaagtgataaacttaactttttaaa 37230253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 10001887 - 10001832
Alignment:
Q  11 tggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||||||||||||| ||||||| |||||||||||||||| ||| || | |||||||    
T  10001887 tggtgaaaagtgataaatttaagtttttaaaaattaaaaaattattaatttcaatg 10001832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 16242002 - 16242113
Alignment:
Q  17 aaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtccttaaagcattggtt 116  Q
    ||||||| |||||||||||||||||| | |||| ||| |||||||| |  |||||| |||||||||  |||| ||||| | |||| | || ||||| |||    
T  16242002 aaagtgaagaatttaactttttaaaagtcaaaacattattgaattccacataaatatactacttttagtttctttaaccattgtcatgaaggcattagtt 16242101  T
Q  117 aggaaaaccctt 128  Q
    || || ||||||    
T  16242102 agcaagaccctt 16242113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 37721574 - 37721629
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||| |||||||||||||||| ||| ||| |||| |||||||| ||||||||||||    
T  37721574 atgtgtgtgtgaccaaacactttttctttagtctcgtgaccatattagaatttctc 37721629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2805456 - 2805395
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaact--ttttaaaaattaaaatattgttgaat 60  Q
    |||||||||||  | |||||||||||||||||||  |||||||| | |||||||||||||||    
T  2805456 tattgaaaaataattaaaagtgatgaatttaactttttttaaaagtcaaaatattgttgaat 2805395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9965091 - 9965132
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    |||||| |||||||||||| | ||||||||||||||||||||    
T  9965091 tattgagaaatggtgaaaaattatgaatttaactttttaaaa 9965132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 28733770 - 28733717
Alignment:
Q  146 catgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaattt 199  Q
    ||||| ||| |||||||||||||||| |||| || ||||||||| |||||||||    
T  28733770 catgtatgtttgaccaaacactatttctttgatcatgtgaccatattagaattt 28733717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 30706213 - 30706258
Alignment:
Q  152 tgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaat 197  Q
    |||||| ||||||||||||  ||||||||||||||||||| |||||    
T  30706213 tgtgtgtccaaacactattgatttggtcttgtgaccatgtaagaat 30706258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 43140360 - 43140417
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||||  ||||| |||| ||||||||||||||||| | |||||||| |||||    
T  43140360 attgaaaaatgacgaaaaatgataaatttaactttttaaaattaaaaatattattgaa 43140417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1729557 - 1729494
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    ||||||||||||||||||| ||||  |||| || ||| |||| |||||| |||||||||||||||    
T  1729557 tattgaaaaatggtgaaaaatgatagatttgac-tttgaaaagttaaaaaattgttgaattcaat 1729494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 11445328 - 11445364
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaacttttt 38  Q
    |||||||||||||||||| |||| |||||||||||||    
T  11445328 attgaaaaatggtgaaaaatgataaatttaacttttt 11445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 17603883 - 17603819
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||||||||| | |||| |||| ||||||||||||||||| | ||||| || ||||| ||||||    
T  17603883 attgaaaaatgataaaaaatgataaatttaactttttaaaagtcaaaatgttattgaaatcaatg 17603819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 30831676 - 30831636
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    |||| |||||||||||||||||||||| | |||||||||||    
T  30831676 aaaaatgatgaatttaactttttaaaagtaaaaatattgtt 30831636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 34780023 - 34780116
Alignment:
Q  10 atggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcct 103  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  34780023 atggtgaaaagtgaagaatttaactttttaaaagttaaaacattgttgaattcaatgtaaatatactacttttgatttccttaaccattgtcct 34780116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 6507438 - 6507527
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcct 103  Q
    ||||||||||  ||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  6507438 tgaaaagtgaaaaatttaactttttaaaaatcaaaacattgttgaattcaatgtatatatactacttttgatttccttaaccattgtcct 6507527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 31220365 - 31220467
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcc 102  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||| || ||||||  |||| ||| | |||||||||| ||||||||| |||||| |    
T  31220365 ttgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatgttattgaataaaatgcaaacatactacttttggtttccttaataagtgttc 31220464  T
Q  103 tta 105  Q
    |||    
T  31220465 tta 31220467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12226367 - 12226469
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    |||||| ||||| | |||||||| |||||||||||||| ||| | |||| |||||||||||||||||||||| |||| ||||| |||||||||| | |||    
T  12226367 tattgagaaatgattaaaagtgaagaatttaactttttgaaagtaaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgt 12226466  T
Q  101 cct 103  Q
    |||    
T  12226467 cct 12226469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 994864 - 994928
Alignment:
Q  138 tacttgtccatgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||||||  |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  994864 tacttgtttatgtgtgtgtgaccaaacactatttatttggtcttgtgaccatgttagaatttctc 994928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 21186058 - 21186145
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||  |||| |||    |||||||||||||||||||    
T  21186058 aaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattattgaatctaatgcaaaattgctacttttgatttccttaa 21186145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 14232528 - 14232618
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttcctta 92  Q
    |||||||||||||||||||||||||||||| ||||| |||| | |||| ||||| ||||  |||||||| | |||||||||||||| ||||    
T  14232528 attgaaaaatggtgaaaagtgatgaatttagcttttcaaaagtcaaaacattgtcgaatctaatgtaaacatactacttttgattttctta 14232618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10855505 - 10855413
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||| ||||||||||| ||||||||||||||||| | ||||| ||||||||  | ||| |||||  |||||||||||||| |||||    
T  10855505 tattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa-accatgcaaatatgctacttttgatttctttaac 10855413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 26606207 - 26606272
Alignment:
Q  138 tacttgtccatgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctcc 203  Q
    |||||||  |||| |||||||||||||||| |||||| ||| ||||||||||||||||||||||||    
T  26606207 tacttgtttatgtgtgtgtgaccaaacactttttgttcggtattgtgaccatgttagaatttctcc 26606272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27127543 - 27127612
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaa 70  Q
    |||||| |||||||||||| |||||||||||||||||||||| | || |||||||||||| || ||||||    
T  27127543 tattgagaaatggtgaaaaatgatgaatttaactttttaaaagtcaagatattgttgaatccattgtaaa 27127612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 29964374 - 29964281
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||| |||||||||||| | |  ||||||||||||||||| | |||| |||||||||||||||||||||| | || |||||  |||||||||    
T  29964374 tattgagaaatggtgaaaaataaataatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatattatttttgggttccttaac 29964281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 20775030 - 20775129
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    |||||||||| ||||||| | || |||||| |||||||||  ||||||||||||| ||||||| | ||||  |||||||||  |||| ||||||||||||    
T  20775030 attgaaaaattgtgaaaaataataaatttatctttttaaaggttaaaatattgttaaattcaacgaaaatctactacttttagtttctttaacaagtgtc 20775129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 28014701 - 28014643
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||||||||||| |||||| ||| ||||||||||| ||||||||||||||||| |||||    
T  28014701 aaatggtgaaaaatgatgagtttgactttttaaaagttaaaatattgttgaatccaatg 28014643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 7875218 - 7875275
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||| ||||||||||| ||||||||||||||||| | ||||||||||||||    
T  7875218 attggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 7875275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 8324141 - 8324198
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||| |||| ||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  8324141 attgagaaattgtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaa 8324198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26539186 - 26539081
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaatt-aaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    |||||||||||| |||||| ||||  |||| |||||||||||||| |||| |||||||||||||||| |||   |||| ||||  |||||||||| ||||    
T  26539186 tattgaaaaatgatgaaaattgatagatttgactttttaaaaattaaaaaaattgttgaattcaatgcaaacttactatttttagtttccttaactagtg 26539087  T
Q  100 tcctta 105  Q
     |||||    
T  26539086 ccctta 26539081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5029488 - 5029548
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatt 61  Q
    |||||||||||||| ||| ||  ||||||||||||||||||| |||||||| |||||||||    
T  5029488 tattgaaaaatggtaaaatgttgtgaatttaactttttaaaagttaaaatagtgttgaatt 5029548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 7880469 - 7880521
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||| ||||||||||| ||||||||||||||||| | ||||||||||||||    
T  7880469 aaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 7880521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 6866982 - 6866923
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||||||||||||||||| |||||||| |||||||| | ||||| |||||||| ||||||    
T  6866982 aaaatggtgaaaagtgataaatttaaccttttaaaagtcaaaatgttgttgaaatcaatg 6866923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 21427350 - 21427287
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaat 71  Q
    |||| ||||||||||||  ||||||| |||||||| || ||| |||||||||||||||||||||    
T  21427350 aaatagtgaaaagtgattgatttaacattttaaaagtttaaagattgttgaattcaatgtaaat 21427287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29692377 - 29692416
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  29692377 tattgaaaaatggtgaaaagtgataaatttaactttttaa 29692416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 12191559 - 12191473
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||||||| ||||||| ||||||||| | ||||| |||||||| |||||  ||| |  |||||||||  |||||||||    
T  12191559 aaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaatcaatacaaacatgctacttttgccttccttaac 12191473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 21479923 - 21479861
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaa 70  Q
    |||| ||||||||||||  ||||||| |||||||| || ||| ||||||||||||||||||||    
T  21479923 aaatagtgaaaagtgattgatttaacattttaaaagtttaaagattgttgaattcaatgtaaa 21479861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 33009797 - 33009751
Alignment:
Q  156 tgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||| |||||||||||||||  |||||||||||||||||||||||||    
T  33009797 tgactaaacactatttgtttattcttgtgaccatgttagaatttctc 33009751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 5578346 - 5578254
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||  ||| || |||| ||||||||||||||||| | ||||||||||||||   |||| ||| |  |||||||||| |||||||||    
T  5578346 attgaaaaataatgagaattgataaatttaactttttaaaagtcaaaatattgttgaaacaaatgcaaacatgctacttttgacttccttaac 5578254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 19646068 - 19646029
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  19646068 ttgaaaaatggtgaaaagtgttgaattcaactttttaaaa 19646029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 26572119 - 26572206
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||| | ||||||||| |||||||  |||||||| ||||||||||||| ||  ||||| ||| |  |||||||||| |||||||||    
T  26572119 aaaatgataaaaagtgataaatttaatattttaaaagttaaaatattgttaaaaccaatgcaaacatgctacttttgacttccttaac 26572206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12775183 - 12775129
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgt 55  Q
    |||| |||| || |||||| |||| ||||||||||||||||| ||||||||||||    
T  12775183 tattaaaaactgatgaaaaatgattaatttaactttttaaaacttaaaatattgt 12775129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20027310 - 20027379
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaa 70  Q
    ||||| |||||| | |||| ||||||||| || ||||||||| | |||||||||||||  ||||||||||    
T  20027310 tattgcaaaatgataaaaattgatgaattaaattttttaaaagtcaaaatattgttgatgtcaatgtaaa 20027379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 32251418 - 32251362
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||||||||||||||| || | |||||| |||| |||||| |||||||||||||||    
T  32251418 aaatggtgaaaagtgatggatctgactttt-aaaagttaaaaaattgttgaattcaat 32251362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12175632 - 12175584
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaa 49  Q
    |||||||||||| | |||| |||| ||||||||||||||||| ||||||    
T  12175632 tattgaaaaatgataaaaactgataaatttaactttttaaaagttaaaa 12175584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 16437643 - 16437711
Alignment:
Q  26 aatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||||||| | ||||||||||||||  ||||| ||| |  ||||| ||| ||||||||||    
T  16437643 aatttaactttttaaaagtaaaaatattgttgaaaccaatgcaaacatgctactgttggtttccttaac 16437711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 32204254 - 32204151
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||  ||||  ||||||||||||||||||||||    
T  32204254 attgaaaaatgatgaaaagtgatgaatttaactttttaaaagttaaaatatttttgaatacaatgcaaatttactatctttgatttccttaacaagtgtc 32204155  T
Q  102 ctta 105  Q
    ||||    
T  32204154 ctta 32204151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 10575802 - 10575888
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||||||  ||||||||||||||||| |  |||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  10575802 aaatggtgaaaagtgaaaaatttaactttttaaaactccaaatattgttgaattcaatgaaaatatactacttttgatttctttaac 10575888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 34835930 - 34835828
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtccttaaa 107  Q
    ||||| |||||| ||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||||| ||||||||||  | |||| |||||    
T  34835930 aaatgatgaaaaatgaagaatttaactttttaaaagttaaaatattgttaaattcaatataaatatactacttttaatttccttaatcattgtctttaaa 34835831  T
Q  108 gca 110  Q
    |||    
T  34835830 gca 34835828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 44296945 - 44297035
Alignment:
Q  9 aatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||||||||    ||||||||| |||||||||||||||    
T  44296945 aatggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttccttaacaagtg 44297035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 48879736 - 48879650
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| ||||||||||| |||||||| ||||||||| |||||||||||||||||| ||||||||||  ||||||||||||| ||||||    
T  48879736 aaatagtgaaaagtgaagaatttaattttttaaaagttaaaatattgttgaatttaatgtaaatatgctacttttgattttcttaac 48879650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4686079 - 4686176
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagt 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||   |||   ||||||| |||||||||||||||||    
T  4686079 tattgaaaaatggtgaaaagtgattaatttaactttttaaaagttaaaaaagtgttgaattcaagacaaacttactacttatgatttccttaacaagt 4686176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 35003672 - 35003577
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcct 103  Q
    |||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| |||||   |||| ||||| |||| ||||||||||||||    
T  35003672 aaaatggtgaaaagtgattaatttaactttttaaaaattaaaaaagtgttgaattcaaagtaaacttacta-ttttggtttcattaacaagtgtcct 35003577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 16082474 - 16082572
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcctta 105  Q
    ||||||||||||| ||||||||||||| |||||||| ||||  ||||||||||| ||||| ||| | ||||||||||  |||||||||||||| |||||    
T  16082474 aaaatggtgaaaattgatgaatttaacgttttaaaagttaagttattgttgaatccaatgcaaacatactacttttggattccttaacaagtgccctta 16082572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30388696 - 30388789
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||||||||| |||| ||||||||||||||||| | |||||||| ||||| ||||| |||| | ||||||||||| ||| |||||    
T  30388696 tattgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaatcaatataaacatactacttttgacttctttaac 30388789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 40763321 - 40763236
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgattt 87  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||  ||||| |||||  |||||||| ||||    
T  40763321 attgaaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaatatgctactttttattt 40763236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 35404310 - 35404394
Alignment:
Q  21 tgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcctta 105  Q
    |||||||||||||||||||||| ||||||||| |||||||  ||||||||   ||||||||||||||||||||||| || |||||    
T  35404310 tgatgaatttaactttttaaaagttaaaatatcgttgaatctaatgtaaacctactacttttgatttccttaacaactgccctta 35404394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 43189685 - 43189741
Alignment:
Q  13 gtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaa 69  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  43189685 gtgaaaagtgatgaatttgactttttaaaagttaaaatattgttgaattcaatgtaa 43189741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 6548592 - 6548505
Alignment:
Q  12 ggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    |||||||| |||||||||||||||||||||| |||||||||||||| || ||||| |||   ||||||||||||| | ||||||||||    
T  6548592 ggtgaaaaatgatgaatttaactttttaaaagttaaaatattgttggatccaatgcaaacttactacttttgattcctttaacaagtg 6548505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 27053535 - 27053622
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||||||||  ||||| ||| |  ||||||||| ||||||||||    
T  27053535 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacattctacttttggtttccttaac 27053622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1907625 - 1907730
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    |||||||||||||| |||| | |||||||||| ||||||| ||| ||||||||||||||| ||||| ||| | | ||| |||| ||||||||||||||||    
T  1907625 tattgaaaaatggtaaaaaataatgaatttaattttttaataatcaaaatattgttgaatgcaatgcaaacata-tacatttggtttccttaacaagtgt 1907723  T
Q  101 ccttaaa 107  Q
    | |||||    
T  1907724 ctttaaa 1907730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 29687543 - 29687457
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||| ||| |  |||||||||  ||||||||    
T  29687543 aaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaa 29687457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5240368 - 5240485
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| || |||||  ||||| ||| |  |||||||||  ||||||||| | |||    
T  5240368 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaaccaatgcaaacatgctacttttggcttccttaaccattgt 5240467  T
Q  101 ccttaaagcattggttag 118  Q
    | | || |||||||||||    
T  5240468 cttaaaggcattggttag 5240485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 40774279 - 40774339
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattc 62  Q
    ||||||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  40774279 attgaaaaatgatgaaaattgatgaatttaactttttaaaagttaaaatattgatgaattc 40774339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 16931949 - 16931871
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||  ||||||||||||||||| | |||||||||||||||| |||||||||| |||| ||||| ||| ||||||    
T  16931949 aaaagtgaataatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatactatttttggttttcttaac 16931871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 16937332 - 16937254
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||  ||||||||||||||||| | |||||||||||||||| |||||||||| |||| ||||| ||| ||||||    
T  16937332 aaaagtgaataatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatactatttttggttttcttaac 16937254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42222294 - 42222236
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||| |||||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  42222294 tattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 42222236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 49069628 - 49069570
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| || |||||||||||    
T  49069628 tattgaaaaatggtgaaaagtgataaatctaactttttaaaaatcaatatattgttgaa 49069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 3681766 - 3681709
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  3681766 attggaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 3681709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 8380513 - 8380421
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||| ||||||||||| ||||||||||||||||| | ||||| ||||||||  ||||| ||| | ||||||||||  |||||||||    
T  8380513 attggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgaaaacatactacttttggcttccttaac 8380421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 1910311 - 1910224
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||| ||||||||   |||||||| |  |||||||||| ||| |||||    
T  1910311 aaaatggtgaaaaatgataaatttaactttttaaaagttaaaatgttgttgaaacaaatgtaaacatgctacttttgacttctttaac 1910224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5543119 - 5543056
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaa 64  Q
    |||||| |||||||||||||||||  |||| ||||||||||| |||||| ||||||||||||||    
T  5543119 tattgagaaatggtgaaaagtgatatatttgactttttaaaagttaaaaaattgttgaattcaa 5543056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 7322991 - 7323082
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||||||||| ||||||| ||||||||| | ||||| ||||||||  ||||| ||| |  |||||||||| ||| |||||    
T  7322991 ttgaaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttctttaac 7323082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 5977757 - 5977811
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatt 61  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  5977757 aaaatagtgaaaagtgatggatttaactttttaaaagttaaaaaattgttgaatt 5977811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8258674 - 8258756
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttg 83  Q
    |||||||||||||||||||||||| ||||||||||||||| | | | ||| ||||||||  ||||| ||| | ||||||||||    
T  8258674 tattgaaaaatggtgaaaagtgataaatttaactttttaatagtcataattttgttgaaaccaatgcaaacatactacttttg 8258756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 18800202 - 18800288
Alignment:
Q  19 agtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcctta 105  Q
    |||||| ||||||||||||||||||||| ||||||||||||| || |  |||   |||||||||||||| |||||||| | ||||||    
T  18800202 agtgataaatttaactttttaaaaattacaatattgttgaatccattacaaacttactacttttgattttcttaacaaatatcctta 18800288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29034760 - 29034702
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||| |||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  29034760 tattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 29034702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31626077 - 31626135
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  31626077 tattaaaaaatgatgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaa 31626135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43567542 - 43567600
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||| |||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  43567542 tattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 43567600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 41188823 - 41188924
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    |||| |||||||||||| ||||| ||||||||||||||||| | |||||  ||||||| |||||| ||| | ||||| ||||  ||||||||| | ||||    
T  41188823 attggaaaatggtgaaaggtgataaatttaactttttaaaagtcaaaatgctgttgaaatcaatgcaaacatactacatttggcttccttaaccattgtc 41188922  T
Q  102 ct 103  Q
    ||    
T  41188923 ct 41188924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 46478593 - 46478649
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||| ||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  46478593 attgaaaaatagtgaaaa-tgataaatttaactttttaaaagttaaaatattgttgaa 46478649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 36279191 - 36279143
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaat 50  Q
    |||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  36279191 attggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaat 36279143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41141097 - 41141033
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    ||||| |||||||||||||||  | ||||||||||||||||||| |||| |||||||| ||||||    
T  41141097 tattggaaaatggtgaaaagttgttaatttaactttttaaaaatcaaaaaattgttgatttcaat 41141033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 41769684 - 41769776
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaacttt-ttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttcctta 92  Q
    |||| |||||||||||||||||  |||||||| ||| |||||| | |||| ||||||||||||||||| |||| || | |||| |||||||||    
T  41769684 tattaaaaaatggtgaaaagtggagaatttaattttattaaaagtcaaaacattgttgaattcaatgttaatataccattttttatttcctta 41769776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 14718167 - 14718218
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||| | |||||||||||||||||||| |||||||||| |||||||||||    
T  14718167 tgaaaaataatgaatttaactttttaaaagttaaaatattattgaattcaat 14718218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 16957711 - 16957656
Alignment:
Q  28 tttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttg 83  Q
    ||||||||||||||| | |||||||||||||||| |||||||||| | ||||||||    
T  16957711 tttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatattacttttg 16957656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 24359750 - 24359837
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||| ||||| ||| ||||||||||||||||| ||||||| ||||||||  ||||| ||| |  |||||||||  |||||||||    
T  24359750 aaaatggtaaaaagggataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaac 24359837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 30783467 - 30783412
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||| |||||||||||||||| ||| ||||||| ||||||||| ||||||||||||    
T  30783467 atgtgtgtgtgaccaaacactttttatttggtcatgtgaccattttagaatttctc 30783412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 35239825 - 35239888
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||||||||| | ||| ||||||||||||||||||||||| |||||||  | ||||||||||||    
T  35239825 ttgaaaaatgataaaacgtgatgaatttaactttttaaaagttaaaatgctattgaattcaatg 35239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40066953 - 40066996
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaat 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  40066953 tattgaaaaatggtgaaaaatgataaatttaactttttaaaaat 40066996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 42552510 - 42552610
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcc 102  Q
    ||||||||| || |||| | ||||||| |||||||||||| | ||||||||||| ||||||||| ||| | | ||||||||||||  |||| |||| |||    
T  42552510 ttgaaaaatagtaaaaaataatgaatt-aactttttaaaagtcaaaatattgttaaattcaatgcaaacatattacttttgattttgttaataagtatcc 42552608  T
Q  103 tt 104  Q
    ||    
T  42552609 tt 42552610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 3720151 - 3720247
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagt 98  Q
    ||||| |||||||| ||| |||| ||||||||||||||||| |||||| ||| |||||| || |  ||||  |||| |||| |||||||||| ||||    
T  3720151 attgacaaatggtgtaaaatgataaatttaactttttaaaagttaaaacattcttgaatccattacaaatctactattttttatttccttaataagt 3720247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 8292817 - 8292725
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| ||||||||||||||| || |||||  |||||||||| | ||||| |||||||| |||||  ||| |  |||||||||| |||||||||    
T  8292817 attggaaaatggtgaaaagttataaatttgcctttttaaaagtcaaaatgttgttgaaatcaatccaaacatgctacttttgacttccttaac 8292725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 44260541 - 44260632
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaaca 95  Q
    |||||||||| |||||| |||||||||||| |||||||||   ||||| || ||||||| |||| ||| | |||| ||||| |||||||||||    
T  44260541 ttgaaaaatgatgaaaa-tgatgaatttaattttttaaaagccaaaatgttattgaatttaatgcaaacatactaattttggtttccttaaca 44260632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 45627395 - 45627340
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||| |||||||||||||| | ||| ||||||| ||||||||| ||||||||||||    
T  45627395 atgtgtgtgtgaccaaacagtttttatttggtcatgtgaccattttagaatttctc 45627340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 48454865 - 48454899
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  48454865 aaatggtgaaaagtgataaatttaactttttaaaa 48454899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 48705702 - 48705656
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaa 49  Q
    |||||||||||||||||||| |||||| |||||| ||||| ||||||    
T  48705702 ttgaaaaatggtgaaaagtgttgaattcaactttctaaaagttaaaa 48705656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1566968 - 1567037
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaa 70  Q
    |||||| ||| ||||||||||||| ||||| | |||| ||||| ||||| |||||||||||  |||||||    
T  1566968 tattgagaaacggtgaaaagtgataaatttgatttttgaaaaactaaaaaattgttgaattttatgtaaa 1567037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 5348009 - 5348049
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    |||| |||||| ||||||||||| |||||||||||||||||    
T  5348009 attggaaaatgatgaaaagtgataaatttaactttttaaaa 5348049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 18529196 - 18529248
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    ||||||||||||||||||||||||| |||||  || | ||||| |||||||||    
T  18529196 aaatggtgaaaagtgatgaatttaatttttttcaagtcaaaatgttgttgaat 18529248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 28452875 - 28452835
Alignment:
Q  4 tgaaaaatggtgaaaagtgatgaatttaactttttaaaaat 44  Q
    |||||||||||| ||||| ||||||||||||||||| ||||    
T  28452875 tgaaaaatggtggaaagttatgaatttaactttttacaaat 28452835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 43168207 - 43168121
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||| || ||||||||||||||| | |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  43168207 aaatggtgaaaagtgaagagtttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactacttttgatttccttaac 43168121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 44359712 - 44359798
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||| |||||||||||||||||| | |||| |||||||||||||||||||||| |||| ||||| ||||||||||    
T  44359712 aaatggtgaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaac 44359798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 14331903 - 14331817
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||| ||| |||||||||||||||||| | |||| |||||||||||||||||||||| |||| ||||| ||||||||||    
T  14331903 aaatggtgaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaac 14331817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17403021 - 17402923
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    |||| ||||||||| ||||||||||||||||||||||||||| | |||||||||||||||  ||||||||   |||||||||| ||| |||||||||||    
T  17403021 tattaaaaaatggtaaaaagtgatgaatttaactttttaaaagtcaaaatattgttgaatctaatgtaaaactactacttttggttttcttaacaagtg 17402923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 40920259 - 40920159
Alignment:
Q  2 attgaaaaatggtgaaaagtg--atgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    ||||| || ||||||||||||  || ||||||||||||||||| ||||||||||||||||| ||||| ||||  |||||||||| |||||||||||||||    
T  40920259 attgagaagtggtgaaaagtgtgattaatttaactttttaaaagttaaaatattgttgaatccaatgcaaatccactacttttggtttccttaacaagtg 40920160  T
Q  100 t 100  Q
    |    
T  40920159 t 40920159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41898892 - 41898953
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattc 62  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  41898892 tattgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattc 41898953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 51424230 - 51424130
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    ||||||||||| |  ||||||||||||||||||||||||||  |||||| |||||||||| ||||||||| | | |||||||| |||| |||||||||||    
T  51424230 tattgaaaaattgctaaaagtgatgaatttaactttttaaaggttaaaacattgttgaatccaatgtaaacatattacttttggtttctttaacaagtgt 51424131  T
Q  101 c 101  Q
    |    
T  51424130 c 51424130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22346270 - 22346396
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||  ||||| ||| |  |||||||||  ||||||||| | |||    
T  22346270 tattgaaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgt 22346369  T
Q  101 ccttaaagcattggttaggaaaaccct 127  Q
    ||| || ||| ||||||| || |||||    
T  22346370 cctcaaggcaatggttagcaagaccct 22346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40845324 - 40845266
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  40845324 tattgaaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgttgaa 40845266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 8892804 - 8892897
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| ||||||||||||||| | |||||||||||||||||| | |||| |||||| |||||||| |||||| |||||||||  ||||||||||    
T  8892804 tattggaaaatggtgaaaagtaaagaatttaactttttaaaagtcaaaacattgttaaattcaatataaatatactacttttagtttccttaac 8892897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 43433848 - 43433755
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||  ||| | ||||||||||  |||||||||    
T  43433848 tattaaaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaaacatactacttttggcttccttaac 43433755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 28277516 - 28277608
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||||||| ||||||||  ||||| ||| |   |||||||||||||||||||    
T  28277516 attgaaaaatgataaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaaacatgttacttttgatttccttaac 28277608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 48938702 - 48938607
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcct 103  Q
    |||||||||||||||||  |||||| |||||||||| | |||| ||||||||||| |||||||||| |||||||||| |||||||||| | ||||||    
T  48938702 aaaatggtgaaaagtgaaaaattta-ctttttaaaagtcaaaacattgttgaatttaatgtaaatatactacttttggtttccttaaccattgtcct 48938607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 41147512 - 41147604
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||| |||| |||| ||||||||||||||||| | ||||||||||||||  ||||| ||| |  |||||||||| |||||||||    
T  41147512 attgaaaaatggtaaaaaatgattaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgacttccttaac 41147604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 28850944 - 28851042
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    |||| |||||||||||||||||| ||||||||||||||||| | |||| |||||||||  ||||| |||||  |||||||||| || |||||||| ||||    
T  28850944 attggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa-attgttgaaaccaatgcaaatatgctacttttgactttcttaacaattgtc 28851042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 27210795 - 27210705
Alignment:
Q  4 tgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaata-ttgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||| | |||||||||| |||| ||||  | |||||||||||| |||||    
T  27210795 tgaaaaatggtgaaaaatgatcaatttaactttttaaaagttaaaaaagttgttgaatttaatgcaaatttattacttttgatttacttaa 27210705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25177482 - 25177575
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||| |||| ||||||| ||| ||| |||| ||||||||| | |||| || ||||||||||||||||||| |||||||||| |||| |||||    
T  25177482 tattgagaaatagtgaaaaatgaagaaattaattttttaaaagtcaaaacatcgttgaattcaatgtaaatatactacttttggtttctttaac 25177575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 50295466 - 50295531
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||| ||||| |||||||||||| ||||||||||||||||| | |||||||||||||| ||||||    
T  50295466 tattggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaatcaatg 50295531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 27209755 - 27209847
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| ||||||||||||| |||| ||||||||||||||||| ||||||| ||||||||  ||||| ||| |  |||||||||  |||||||||    
T  27209755 attggaaaatggtgaaaattgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatcctacttttggcttccttaac 27209847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 34644223 - 34644143
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaa 96  Q
    |||| |||||||||| ||| ||||||| |||||||||||||||||||||||||||   | || ||||| ||||||||||||    
T  34644223 aaaaatgatgaatttgactatttaaaagttaaaatattgttgaattcaatgtaaacttagtagttttggtttccttaacaa 34644143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 26764623 - 26764674
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatt 198  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  26764623 atgtgtgtgtgaccaaacactatttgtttggccttgtgaccatattagaatt 26764674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 27160139 - 27160222
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaag 97  Q
    |||||| |||||||||| |||||| |||| ||||||||| |||||||||||||||||   |||||||||| ||| | |||||||    
T  27160139 tgaaaaatgatgaatttgacttttcaaaagttaaaatatagttgaattcaatgtaaacctactacttttggttttcctaacaag 27160222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 47655405 - 47655495
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttcctta 92  Q
    |||||||||||||||||| |||| ||||||||||||||||| | ||||| ||||||||  ||||| ||| |  |||||||||  |||||||    
T  47655405 attgaaaaatggtgaaaattgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgccttcctta 47655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47895407 - 47895349
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||||||||||| ||||| ||||||||||||||||  | ||||||||||||||    
T  47895407 tattgaaaaatggtgaaaggtgataaatttaactttttaaatgtcaaaatattgttgaa 47895349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 4656088 - 4656031
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| ||||| || ||||||||| ||||||||||||||||||||||||| ||||||||    
T  4656088 attggaaaatagtaaaaagtgataaatttaactttttaaaaattaaaatgttgttgaa 4656031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 42607358 - 42607415
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||||||||||| |||| ||||||||||||||||| | ||||| ||||||||    
T  42607358 attgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaa 42607415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 47370090 - 47370041
Alignment:
Q  153 gtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  47370090 gtgtgaccaaacactttttgtttgggcttgtgaccatgttagagtttctc 47370041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 34874639 - 34874547
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||||||||||||||| ||||||| ||||||||| | ||||| ||||||||  ||||| ||| |  |||||||||  |||||||||    
T  34874639 attggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaac 34874547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11385843 - 11385910
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgta 68  Q
    ||||| ||||||||||||||| || ||||||||||||||||| | ||||| ||||||||  |||||||    
T  11385843 tattggaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgta 11385910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 26469616 - 26469707
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    ||||||||||  |||||| |||| ||||||||||||||||| | |||||||| |||||  ||||| ||| | ||||||||| | ||||||||    
T  26469616 attgaaaaataatgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaaccaatgaaaacatactacttttaacttccttaa 26469707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 33930038 - 33929947
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    |||||||||| ||||||| |||| ||||||||||||||||| | ||||| ||||||||  ||||| ||| |  |||||||||  ||||||||    
T  33930038 attgaaaaatagtgaaaactgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaa 33929947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 4940774 - 4940828
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    |||| |||||||| ||||||||| ||||||||||||||||| | |||||||||||    
T  4940774 attggaaaatggttaaaagtgataaatttaactttttaaaagtcaaaatattgtt 4940828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 6519343 - 6519293
Alignment:
Q  10 atggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    |||||||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  6519343 atggtgaaaaataatgaatttaacttttaaaaaattcaaatattgttgaat 6519293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 8414856 - 8414914
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||||||||| ||||||||||| | ||||||||| ||||||||||||| ||| ||||    
T  8414856 aaaatggtgaaatgtgatgaatttgattttttaaaagttaaaatattgttcaatccaat 8414914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 31975559 - 31975505
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    ||||||||||| | ||||||| | ||||||||||||||||||| |||||||||||    
T  31975559 attgaaaaatgataaaaagtggtaaatttaactttttaaaaatcaaaatattgtt 31975505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 34690134 - 34690184
Alignment:
Q  152 tgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||||| |||||||||||||||||| |||| ||||||||||| ||||||||    
T  34690134 tgtgtgtccaaacactatttgtttgatcttttgaccatgttaaaatttctc 34690184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 34694662 - 34694712
Alignment:
Q  152 tgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||||| |||||||||||||||||| |||| ||||||||||| ||||||||    
T  34694662 tgtgtgtccaaacactatttgtttgatcttttgaccatgttaaaatttctc 34694712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 45721824 - 45721735
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||||| |||| |||| ||||||||||||||||||| ||||   |||| || |||||| ||| |  ||||||||||||||||||||    
T  45721824 attggaaaatggtaaaaactgataaatttaactttttaaaaatcaaaa---tgttaaaatcaatgcaaacatgctacttttgatttccttaac 45721735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 49901999 - 49901941
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||| |||||||||||||||||| ||||||||||||||||  ||||||  ||||||||    
T  49901999 tattggaaaatggtgaaaagtgataaatttaactttttaaacgttaaaacgttgttgaa 49901941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 2125741 - 2125798
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||| |||||||||||| ||||||||||||||||| | ||||| ||| ||||    
T  2125741 attgaaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatgttgatgaa 2125798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 7190513 - 7190566
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||  |||||||    
T  7190513 aaaaatgatgaaaagtgataaatttaactttttaaaagttaaaatggtgttgaa 7190566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10160999 - 10161064
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||||||||||| |  |||| | ||||||||||||||||||| ||||||||| |||||||| ||||    
T  10160999 tattgaaaaatgatcgaaagaggtgaatttaactttttaaaagttaaaatatcgttgaatttaatg 10161064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 32213923 - 32213980
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||||||||||||||| ||||||| ||||||||| | ||||| ||||||||    
T  32213923 attggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaa 32213980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 41492972 - 41492923
Alignment:
Q  11 tggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    |||||||||||||||||||| || |||||||| ||||||||||| |||||    
T  41492972 tggtgaaaagtgatgaattttacattttaaaagttaaaatattgatgaat 41492923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 46296243 - 46296324
Alignment:
Q  26 aatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtccttaaa 107  Q
    ||||||||||||||||| | ||||||||||||||| ||  ||||| | |||| || |||||||||||| || | ||||||||    
T  46296243 aatttaactttttaaaagtcaaaatattgttgaatgcagcgtaaacatactagttatgatttccttaataaatatccttaaa 46296324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 5945492 - 5945452
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  5945492 attgaaaaatggtgaaaagtgataaattttactttttaaaa 5945452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 11386053 - 11385961
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||||| |||| |||| ||||||||||||||||| | ||||| ||||||||  ||||| ||| |  ||||||||| ||| ||||||    
T  11386053 attggaaaatggtaaaaattgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggttttcttaac 11385961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21268328 - 21268391
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||| |||||||||||| ||||  ||||||||||| |||| |||||| |||||||||||||||    
T  21268328 tattgagaaatggtgaaaaatgatagatttaactttt-aaaagttaaaaaattgttgaattcaat 21268391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 21356922 - 21356970
Alignment:
Q  154 tgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||||||||||||||||| |||||||| ||| |||| ||||||||||||    
T  21356922 tgtgaccaaacactatttctttggtctcgtggccatattagaatttctc 21356970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 44286933 - 44286893
Alignment:
Q  13 gtgaaaagtgatgaatttaactttttaaaaattaaaatatt 53  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  44286933 gtgaaaaatgataaatttaactttttaaaaattaaaatatt 44286893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 47466418 - 47466378
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  47466418 aaaaatgatgagtttaactttttaaaaattaaaatattgtt 47466378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 15390449 - 15390402
Alignment:
Q  154 tgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttct 201  Q
    ||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  15390449 tgtgaccaaacactatttgtttggtcccgtgaccatattagactttct 15390402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 16691360 - 16691305
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattca 63  Q
    ||||||| |||| ||| |||||||||||||||||| | |||| |||||||||||||    
T  16691360 aaatggtaaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaattca 16691305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 24241603 - 24241658
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||| |||||||||||| ||| ||| ||||||| ||||||||| ||||||||||||    
T  24241603 atgtgtgtgtgaccaaatactttttctttggtcctgtgaccatattagaatttctc 24241658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27935055 - 27935158
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgt 100  Q
    ||||| ||||||||||||| | ||| |||| | ||||||||| || ||| |||||||||||||||  |||   |||| ||||  |||||||||| |||||    
T  27935055 tattggaaaatggtgaaaaataatggatttgattttttaaaagttcaaaaattgttgaattcaatacaaacttactattttttgtttccttaacgagtgt 27935154  T
Q  101 cctt 104  Q
    ||||    
T  27935155 cctt 27935158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 30222688 - 30222613
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaa-ttaaaatattgttgaattcaatgtaaataaactacttt 81  Q
    |||||| || |||||||| ||||||| |||||||||| ||||||||||||||||  ||||| |||||  |||||||    
T  30222688 aaaatgatggaaagtgataaatttaattttttaaaaagttaaaatattgttgaaaccaatgcaaatatgctacttt 30222613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 49559745 - 49559784
Alignment:
Q  26 aatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  49559745 aatttaacttcttaaaagttaaaatattgttgaattcaat 49559784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 51046679 - 51046718
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  51046679 ttgaaaaatggtgaaaagtgttgaattcaactttttaaaa 51046718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 41725539 - 41725497
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccat 189  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||    
T  41725539 atgtttgtgtgtccaaatactatttatttggtcttgtgaccat 41725497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 52396515 - 52396458
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||||| | ||||||||| ||||||||||||||||| | |||||||| |||||    
T  52396515 tattgaaaaatgat-aaaagtgataaatttaactttttaaaagtcaaaatattattgaa 52396458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15444964 - 15445029
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||||| |||||||||||||| || || || | ||||||||| |||||| ||| ||||||||||||    
T  15444964 tattgagaaatggtgaaaagtaataaagttgattttttaaaagttaaaaaattattgaattcaatg 15445029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 49508768 - 49508820
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgt 55  Q
    |||| |||||||||||| ||||| ||||||||||||||||| | ||||||||||    
T  49508768 attggaaaatggtgaaa-gtgataaatttaactttttaaaagtcaaaatattgt 49508820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 50154545 - 50154488
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||| | |||| |||| |||||||| |||||||| ||||||| ||||||||    
T  50154545 attgaaaaatgataaaaaatgataaatttaaccttttaaaagttaaaatgttgttgaa 50154488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 6170585 - 6170677
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| ||||| | ||||| |||| ||||||||||||||||| | ||||| ||||||||  ||||| ||| |   ||||||||| |||||||||    
T  6170585 attggaaaatagagaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttgacttccttaac 6170677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10832239 - 10832303
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    ||||| ||||||||||||| || |  |||| | ||||||||| |||||| |||||||||||||||    
T  10832239 tattggaaaatggtgaaaattgctagatttgattttttaaaagttaaaaaattgttgaattcaat 10832303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12381271 - 12381207
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||| |||| |||||| |||||  |||| |||||| |||| |||||| |||||||||||||||    
T  12381271 tattgagaaatagtgaaatgtgatagatttgacttttgaaaagttaaaaaattgttgaattcaat 12381207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12385338 - 12385274
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||| |||| |||||| |||||  |||| |||||| |||| |||||| |||||||||||||||    
T  12385338 tattgagaaatagtgaaatgtgatagatttgacttttgaaaagttaaaaaattgttgaattcaat 12385274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 32268080 - 32268028
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgt 55  Q
    |||||||||||||||||||| |||||| |||||| ||||| | |||| |||||    
T  32268080 ttgaaaaatggtgaaaagtgttgaattcaactttctaaaagtcaaaaaattgt 32268028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 38610329 - 38610456
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    ||||||||||| | |||||||| |||||||||||||||||| | |||| ||||||||||| ||| ||||||||||| |||| ||||||||||| | || |    
T  38610329 attgaaaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaatttaatctaaataaactatttttaatttccttaaccattgcc 38610428  T
Q  102 cttaaag-cattggttaggaaaaccctt 128  Q
    | ||||| || ||||||| |||||||||    
T  38610429 cctaaagacactggttagcaaaaccctt 38610456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 12914247 - 12914155
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||  ||||| ||| | ||||||||||  |||||||||    
T  12914247 attgaaaaatggtgaaaagtgataaatttaattttttaaaaatcaaaatattgttgaaaccaatgcaaacatactacttttggcttccttaac 12914155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37243920 - 37243855
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  37243920 tattggaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaatcaatg 37243855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 17168748 - 17168651
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    ||||||||| |||||||| |||||||||| ||||||||||| ||||||||||| |||||||  || |||   |||||||||| || ||||||||||||    
T  17168748 attgaaaaacggtgaaaaatgatgaatttgactttttaaaatttaaaatattgctgaattccttgcaaacctactacttttggttcccttaacaagtg 17168651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 39167668 - 39167576
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| ||||||||||||||| |  ||||||||||||||||||| |||| |||||| ||||||||||||||| | |||||||| ||| ||||||    
T  39167668 tattggaaaatggtgaaaagtaaa-aatttaactttttaaaaatcaaaacattgttaaattcaatgtaaatatattacttttggttttcttaac 39167576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 4422001 - 4422093
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| |||||||||||||||||| |||||||||||||| |||| ||||| |||||||| |||||| ||| |   ||||||||| |||||||||    
T  4422001 attggaaaatggtgaaaagtgataaatttaactttttacaaatcaaaatgttgttgaagtcaatgcaaacatgttacttttgacttccttaac 4422093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 10163667 - 10163743
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactactttt 82  Q
    ||||| |||||||||||| |||||||||||||||||| | ||||||||| |||||||||| |||||| |||| ||||    
T  10163667 aaaaagggtgaaaagtgaagaatttaactttttaaaagtcaaaatattgctgaattcaatataaatatactattttt 10163743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 20184585 - 20184689
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    ||||| ||| ||||||||||||||||||| ||||||||||| |||||| ||||||||||  |||  ||  | | ||||||||||||||||||||| ||||    
T  20184585 attgagaaacggtgaaaagtgatgaatttcactttttaaaagttaaaacattgttgaatctaatacaatcatattacttttgatttccttaacaaatgtc 20184684  T
Q  102 cttaa 106  Q
     ||||    
T  20184685 gttaa 20184689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 678523 - 678428
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaa 96  Q
    ||||| ||||||||||||||| ||||||||||| |||||||| |||||| |||||||||| || ||||||    ||| ||||| ||||||||||||    
T  678523 tattggaaaatggtgaaaagtaatgaatttaaccttttaaaagttaaaaaattgttgaatccattgtaaacctgctaattttggtttccttaacaa 678428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 338800 - 338858
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||||    
T  338800 tattgaaaaatgataaaaagtgataaatttaactttttaaaaatcaaaatattgttgaa 338858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 3242001 - 3242059
Alignment:
Q  13 gtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaat 71  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  3242001 gtgaaaattgatgaattaaactttttaaaagttaaaatattgttgaattcaatgaaaat 3242059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27823332 - 27823283
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaat 50  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  27823332 tattggaaaatggtgaaaagtgataaatttaactttttaaaaattaaaat 27823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 34546850 - 34546793
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||    
T  34546850 attgaaaaatggtgaaaagtgataaatttaattttttaaaagttaaaatgttgttgaa 34546793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24288560 - 24288496
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||| |||||||||||||||||  |||||||||||||||| ||| || |||||||||||||||    
T  24288560 tattgagaaatggtgaaaagtgatagatttaactttttaaaagttacaaaattgttgaattcaat 24288496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24373661 - 24373725
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||| |||||||||||||||||  |||||||||||||||| ||| || |||||||||||||||    
T  24373661 tattgagaaatggtgaaaagtgatagatttaactttttaaaagttacaaaattgttgaattcaat 24373725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39069312 - 39069372
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatt 61  Q
    ||||| ||||| ||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  39069312 tattggaaaattgtgaaaagtgatgaatttaacattttaaaagtcaaaatattgttgaatt 39069372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 11774535 - 11774578
Alignment:
Q  159 ccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  11774535 ccaaacactatttatttggtcttgtgaccatgttagaatttctc 11774578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 19894886 - 19894791
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    ||||||||| |||  |||||||||||||||||||||| ||||||||||||| ||| ||||  |||     ||||||||||||||||||| ||||||    
T  19894886 aaaaatggttaaatatgatgaatttaactttttaaaagttaaaatattgttaaatccaattcaaaccttatacttttgatttccttaacgagtgtc 19894791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 39567975 - 39567884
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    |||| |||||| |||||| |||| ||||||||||||||||||| |||| |||||||||  ||||| ||| |  |||||||||| ||||||||    
T  39567975 attggaaaatgatgaaaaatgataaatttaactttttaaaaatcaaaacattgttgaaaccaatgcaaacatgctacttttgacttccttaa 39567884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25017327 - 25017420
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| ||||| |||||||||||| ||||||||||||||||| | ||||||| ||||||  ||||  ||| |  |||||||||| |||||||||    
T  25017327 tattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttgaaaccaatacaaacatgctacttttgacttccttaac 25017420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 35653292 - 35653349
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||    
T  35653292 attggaaaatggtgaaaagtgataaatttaactttttgaaaatcaaaatgttgttgaa 35653349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38632181 - 38632112
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaa 70  Q
    |||||| | ||||||||||| |||||||||||||| ||||||||||||||| | ||||||| ||| ||||    
T  38632181 tattgagatatggtgaaaagagatgaatttaacttcttaaaaattaaaataatattgaatttaatataaa 38632112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 43414101 - 43414158
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| ||||||||||||| |||| ||||||||||||||||||| ||||| ||||||||    
T  43414101 attggaaaatggtgaaaaatgatcaatttaactttttaaaaatcaaaatgttgttgaa 43414158  T

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Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 5058812 - 5058760
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||| |||||||||||| |||||||||||||||||||||| | |||||||||    
T  5058812 aaaattgtgaaaagtgataaatttaactttttaaaaattaacaaattgttgaa 5058760  T

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Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 22472135 - 22472083
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaattt 199  Q
    |||| ||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  22472135 atgtgtgtgtgagcaaacactatttgtttggtgttgtgaccatattagaattt 22472083  T

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Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 39693082 - 39692990
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||| |||| |||| |||| |||||| |||||||||| |||||||||||||||| |||||  ||| |   ||||||||| |||||||||    
T  39693082 attgaaaagtggtaaaaaatgataaatttatctttttaaaagttaaaatattgttgaaatcaatacaaacatgttacttttgacttccttaac 39692990  T

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Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1759890 - 1759835
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    ||||||||||||| |||||||||| ||||||||||||||||| | ||||| |||||    
T  1759890 tattgaaaaatggagaaaagtgataaatttaactttttaaaagtcaaaatgttgtt 1759835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10406860 - 10406766
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaa 96  Q
    ||||||||||||| |||||||||| ||||||| ||||| ||| | ||||||||||||||| ||||| ||| |   |||||||| |||||| |||||    
T  10406860 tattgaaaaatggagaaaagtgataaatttaa-ttttttaaattcaaaatattgttgaatccaatgcaaaaatgttacttttggtttcctaaacaa 10406766  T

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Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 17606021 - 17605970
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||| | |||||||||||||||||||| |||||||||| |||||||||||    
T  17606021 tgaaaaataatgaatttaactttttaaaagttaaaatattattgaattcaat 17605970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 39335541 - 39335482
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||| || ||||||||||||||||||||||||||| | ||||| ||||||||| ||||    
T  39335541 aaaaatagtaaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaatccaat 39335482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 21239045 - 21239003
Alignment:
Q  159 ccaaacactatttgtttggtcttgtgaccatgttagaatttct 201  Q
    ||||||||| ||||||||||||||||||||| |||||||||||    
T  21239045 ccaaacactttttgtttggtcttgtgaccatattagaatttct 21239003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27535168 - 27535118
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaa-tttaactttttaaaaattaaaat 50  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  27535168 tattgaaaaatggtgaaaagtgatgaattttaagtttttaaaagttaaaat 27535118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28996286 - 28996224
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattca 63  Q
    ||||| |||||||||||||||  |||||| |||||||||||| |||||| |||||||| ||||    
T  28996286 tattggaaaatggtgaaaagttgtgaattcaactttttaaaagttaaaaaattgttgatttca 28996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 3015092 - 3015145
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 60  Q
    ||||| ||| ||| |||| ||||||||||||||||| |||||||||||||||||    
T  3015092 aaaatagtgtaaaatgattaatttaactttttaaaagttaaaatattgttgaat 3015145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12068210 - 12068251
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  12068210 tattggaaaatggtgaaaagtgataaatttaactttttaaaa 12068251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 13951273 - 13951330
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||||||||||||||| ||||||  ||||||||| | ||||| ||||||||    
T  13951273 attgaaaaatggtgaaaagtgataaatttatttttttaaaagtcaaaatgttgttgaa 13951330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 25568329 - 25568386
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||| |||||||||||  |||||||||||||||||| ||||| || |||||    
T  25568329 attgaaaaatgatgaaaagtgatacatttaactttttaaaaatcaaaatgttattgaa 25568386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 35945318 - 35945261
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| ||||| |||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  35945318 attggaaaatagtgaaaagtgataaatttaactttttaaatgttaaaatgttgttgaa 35945261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 3639112 - 3639203
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| ||||||||||| |||||| ||||||| ||||| |||| | |||||||||||||  ||||| ||| | | ||||||||| |||||||||    
T  3639112 attggaaaatggtgaagagtgataaatttaa-ttttttaaaagtcaaatattgttgaaaccaatgcaaacatattacttttgacttccttaac 3639203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 40099400 - 40099356
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaat 50  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||    
T  40099400 aaaaatggtgaaaagtgataaatttaaccttttaaaaattgaaat 40099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 6823816 - 6823859
Alignment:
Q  28 tttaactttttaaaaattaaaatattgttgaattcaatgtaaat 71  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||    
T  6823816 tttaactttttaaaagttaaaatattgttgaatccaatgcaaat 6823859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 28143166 - 28143217
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||||||||||| | || ||||||||||||||||||| ||||| ||||||||    
T  28143166 aaatggtgaaaaataataaatttaactttttaaaaatcaaaatgttgttgaa 28143217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 34278841 - 34278896
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattc 62  Q
    ||||| |||||||||| ||||||| |  |||||||| |||||||||||||||||||    
T  34278841 aaaattgtgaaaagtgttgaatttgagattttaaaagttaaaatattgttgaattc 34278896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 1446976 - 1447025
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    |||||| ||||||| |||||||||||||| ||||||| |||||||||||||    
T  1446976 aaaaattgtgaaaa-tgatgaatttaactatttaaaagttaaaatattgtt 1447025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 8454571 - 8454621
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||||||||| ||||||||||||||| ||||||||||| || ||| |||||    
T  8454571 aaaagtgatggatttaactttttaaacattaaaatattattaaatccaatg 8454621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 10979884 - 10979834
Alignment:
Q  16 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||| ||||||||||||  ||||||||||||||||||| |||||| |||||    
T  10979884 aaaaatgatgaatttaaaattttaaaaattaaaatattattgaatccaatg 10979834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 1479173 - 1479230
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||  ||||||||||| ||||||||||||||||| | ||||| || |||||    
T  1479173 attgaaaaataatgaaaagtgataaatttaactttttaaaagtcaaaatgttattgaa 1479230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 4293890 - 4293947
Alignment:
Q  24 tgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttt 81  Q
    ||||||||||||||||||| | |||| ||| |||||| |||| |||||| ||||||||    
T  4293890 tgaatttaactttttaaaagtcaaaagattattgaatccaatataaatatactacttt 4293947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 4962553 - 4962610
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||| ||||||||||| ||||||||||||| ||| | ||||| ||||||||    
T  4962553 attggaaaatgatgaaaagtgataaatttaacttttttaaagtcaaaatgttgttgaa 4962610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 5151561 - 5151504
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||| |||||| |||| ||||||||||||||||| | ||||| ||||||||    
T  5151561 attggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaa 5151504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 12349586 - 12349635
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    ||||||||||||||||||  |||| ||||||||||| |||||| ||||||    
T  12349586 aaaatggtgaaaagtgatagatttgactttttaaaagttaaaaaattgtt 12349635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28599690 - 28599755
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||| ||||| ||||||| |||| ||||| ||||||||||| ||||||  || ||||||||||||    
T  28599690 tattggaaaatagtgaaaaatgataaatttgactttttaaaagttaaaaatttattgaattcaatg 28599755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 15915083 - 15915018
Alignment:
Q  27 atttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||| |||||||||| ||||| ||||   ||| | |||||||||| ||||||||||    
T  15915083 atttaactttttaaaagttaaaatatttttgaaatcaa--caaacatactacttttggtttccttaac 15915018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 28992996 - 28992944
Alignment:
Q  11 tggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattca 63  Q
    |||||||||||  |||||| |||||||||||| |||||| |||||||| ||||    
T  28992996 tggtgaaaagttgtgaattcaactttttaaaagttaaaaaattgttgatttca 28992944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 20212433 - 20212523
Alignment:
Q  9 aatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||||||||    ||||||||| |||||||||||||||    
T  20212433 aatggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttccttaacaagtg 20212523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 39972195 - 39972291
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcctt 104  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||||| ||| | |||| ||||| |||||||||| |||| ||||    
T  39972195 aaatggtgaaaagtgatgaatttgactttttaaaagttaaaaaattgttcaattcaatgcaaacatactatttttggtttccttaactagtgccctt 39972291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24305014 - 24304933
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttg 83  Q
    |||||||||| |||||||||||| ||||||||||||| ||| || ||||| ||||||||||||||||||||| ||||||||||    
T  24305014 tattgaaaaacggtgaaaagtgaagaatttaactttt-aaagatcaaaattttgttgaattcaatgtaaatatactacttttg 24304933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11295500 - 11295593
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||| ||||| |||||| |||||||||||||||||||||| | |||| | ||||||||||||| |||||| |||| ||||| ||||||||||    
T  11295500 tattgagaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaacaatgttgaattcaatataaatatactaattttggtttccttaac 11295593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 38870076 - 38869987
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttcctt 91  Q
    |||| |||||| |||||||||| ||||| ||| |||||||| | ||||||||| ||||||||||||||||| |||||||||| |||||||    
T  38870076 attggaaaatgatgaaaagtgaagaattcaacattttaaaagtcaaaatattgatgaattcaatgtaaatatactacttttggtttcctt 38869987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 11332830 - 11332909
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactactt 80  Q
    |||||| |||||||| ||||||| |||||||||||||||||| | |||| ||||||||||||||| |||||| |||||||    
T  11332830 tattgagaaatggtgtaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaatataaatatactactt 11332909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 19389346 - 19389439
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| ||||| |||||||||||| ||||||||||||||||| | ||||||| ||||||  ||||| ||| |  ||||||||||||||||||||    
T  19389346 tattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttgaaaacaatgcaaacatgctacttttgatttccttaac 19389439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 6433616 - 6433524
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||||||||||| |||||| || ||||||||||||||||| ||||||||||||| ||  ||||| ||| | ||||||||||  |||||||||    
T  6433616 attgaaaaatggtaaaaagttataaatttaactttttaaaagttaaaatattgttaaaaccaatgcaaagatactacttttgtcttccttaac 6433524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 45338076 - 45337984
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||||||||||||||||| |||| ||||||||||||||||||| ||||| || ||||   ||||| ||| | |||||||||| ||||||||||    
T  45338076 attgaaaaatggtgaaaaatgataaatttaactttttaaaaatcaaaatgttattgagaccaatgcaaacatactacttttggtttccttaac 45337984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 4308880 - 4308785
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagt 98  Q
    |||||||||||| |||| |||||||||||||||| ||||| |||||||| |||||||| ||||  |||   |||| ||||| ||||||||||||||    
T  4308880 ttgaaaaatggtaaaaaatgatgaatttaactttataaaagttaaaatagtgttgaatccaatacaaacctactatttttggtttccttaacaagt 4308785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 6396315 - 6396426
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtccttaa 106  Q
    ||||||||||| ||| ||||||||||| |||||||  ||||||| |||||||||  |||  ||||| |||| |||||||||| |||||||||||| | ||    
T  6396315 aaaatggtgaagagtaatgaatttaacattttaaacgttaaaatgttgttgaatctaatacaaatatactaattttgatttctttaacaagtgtcttaaa 6396414  T
Q  107 agcattggttag 118  Q
     ||||| |||||    
T  6396415 ggcatttgttag 6396426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10694880 - 10694787
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    |||| ||||||||| ||||||||| ||||||||||||||||| | ||||| |||||||| |||||| |||||   ||||||||  |||||||||    
T  10694880 tatttaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaatatgatacttttggcttccttaac 10694787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 25249378 - 25249435
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  25249378 attggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 25249435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7532858 - 7532765
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaa 96  Q
    ||||| |||||||||||||||||||||||||  ||||||||| ||  ||||||||||||| ||||  |||   |||||||||| ||||||||||||    
T  7532858 tattggaaaatggtgaaaagtgatgaatttaggtttttaaaagtt--aatattgttgaatccaattcaaacctactacttttggtttccttaacaa 7532765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 17319995 - 17320059
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaa 70  Q
    |||| |||||||||| ||||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  17319995 aaaagtggtgaaaagagatgaatttaactttttaaaagttaaaatattgttagattcattgtaaa 17320059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8018834 - 8018779
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||    
T  8018834 tattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatgttgtt 8018779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 21016094 - 21016185
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    ||||||||||||| |||||||||  |||||||||||||||| | ||||| ||||||||  ||||| ||| |  |||||||||| ||||||||    
T  21016094 attgaaaaatggttaaaagtgatagatttaactttttaaaagtcaaaatgttgttgaagccaatgcaaacatgctacttttgacttccttaa 21016185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 34173553 - 34173604
Alignment:
Q  152 tgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctcc 203  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  34173553 tgtgtgaccaaacactttttgtttagtcttgtgaccatgttaaaatttctcc 34173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 34514570 - 34514625
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||| ||||||||||||||||||||||||||||||||||| || ||| ||||||||    
T  34514570 atgtgtgtgtgaccaaacactatttgtttggtcttgtgactatattaaaatttctc 34514625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 37433337 - 37433247
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaa 93  Q
    ||||||||||| ||||||||||| ||||||||||||| ||| ||||||| ||||||||  ||||| ||| | ||||||||| | ||||||||    
T  37433337 attgaaaaatgatgaaaagtgataaatttaacttttt-aaagttaaaatgttgttgaaaccaatgcaaacatactacttttaacttccttaa 37433247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21016307 - 21016249
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||||||||||||||||  |||||||||||||||| | ||||| ||||||||    
T  21016307 tattgaaaaatggtgaaaagtgatagatttaactttttaaaagtcaaaatgttgttgaa 21016249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 5300278 - 5300198
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtg 99  Q
    |||||||||||||||     ||||||||| | ||||||||||||||||||||| |||   |||||||||| |||||||||||||||    
T  5300278 tgaaaagtgatgaat-----tttttaaaagtcaaaatattgttgaattcaatgcaaacttactacttttggtttccttaacaagtg 5300198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 6939230 - 6939173
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||||||| ||||||| ||||||||||||||||| | ||||| ||||||||    
T  6939230 attgaaaaatggtgacaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 6939173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 26195410 - 26195467
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| ||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  26195410 attggaaaattgtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 26195467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 30351664 - 30351599
Alignment:
Q  2 attgaaaaatggtgaaaa-gtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    ||||||||||||| |||| |||| || ||||||||||||||| ||||||||||||||||| |||||    
T  30351664 attgaaaaatggtaaaaaagtgacgagtttaactttttaaaagttaaaatattgttgaatccaatg 30351599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 31639665 - 31639584
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgattt 87  Q
    ||||| || |||||||| | | ||||||||||||||||||| || |||||||||||||| |||||   ||||||||||||||    
T  31639665 aaaaaaggcgaaaagtggtcattttaactttttaaaaattacaaaattgttgaattcaaggtaaacttactacttttgattt 31639584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 7444338 - 7444251
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtc 101  Q
    ||||||||| ||||||| |  |||||||| |||||||||||||||||  |||| |||   |||||||||| |||||||||||| ||||    
T  7444338 tgaaaagtggtgaatttgatgttttaaaagttaaaatattgttgaatctaatgcaaacctactacttttggtttccttaacaaatgtc 7444251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 30208324 - 30208379
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctc 202  Q
    |||| |||||||||||||||| ||| ||||||| ||||||||| ||||||||||||    
T  30208324 atgtgtgtgtgaccaaacactttttctttggtcctgtgaccatattagaatttctc 30208379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34713957 - 34714048
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttcctta 92  Q
    ||||||||||||||| |||||||| ||||| |||| |||||| | ||||| ||||||||  ||||| ||| |  |||||||||| |||||||    
T  34713957 tattgaaaaatggtgcaaagtgataaatttcacttcttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttcctta 34714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26892859 - 26892801
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||| || |||| |||| ||||||||||||||||| |||||||||| |||||    
T  26892859 tattgaaaaattgtaaaaaatgataaatttaactttttaaaagttaaaatattattgaa 26892801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 31333145 - 31333091
Alignment:
Q  147 atgtttgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttct 201  Q
    |||| |||||||||||||||||||| |||| || ||||||||| |||||||||||    
T  31333145 atgtgtgtgtgaccaaacactatttctttgatcatgtgaccatattagaatttct 31333091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 31596462 - 31596512
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgtt 56  Q
    |||||||||||||| |||||||||| ||||||||||| | |||||||||||    
T  31596462 aaaaatggtgaaaaatgatgaattttactttttaaaagtcaaaatattgtt 31596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 33741523 - 33741581
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaata 72  Q
    |||||| |||| ||||||||||||||||| ||||||||||||||||  ||||| |||||    
T  33741523 tgaaaaatgataaatttaactttttaaaagttaaaatattgttgaaaccaatgcaaata 33741581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 18069034 - 18068977
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    |||| |||||||||||||||||| ||||||||||||||||  | ||||| ||||||||    
T  18069034 attggaaaatggtgaaaagtgataaatttaactttttaaaggtcaaaatgttgttgaa 18068977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 34421361 - 34421418
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaat 65  Q
    |||||||||||| |||  |||| |||||||||||||| |||| |||||||||||||||    
T  34421361 aaatggtgaaaaatgaaaaattcaactttttaaaaatcaaaacattgttgaattcaat 34421418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7473646 - 7473586
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatt 61  Q
    ||||||| ||| ||||||| ||||| |||| ||||||||||| ||||||||||||| ||||    
T  7473646 tattgaataatagtgaaaaatgatgcatttgactttttaaaagttaaaatattgttaaatt 7473586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 39491855 - 39491891
Alignment:
Q  13 gtgaaaagtgatgaatttaactttttaaaaattaaaa 49  Q
    |||||||||||||||||||||||||||||| ||||||    
T  39491855 gtgaaaagtgatgaatttaactttttaaaagttaaaa 39491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 44874397 - 44874357
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  44874397 attgaaaaatggtgaaaagtgataaatttaaatttttaaaa 44874357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 37922972 - 37923046
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactactttt 82  Q
    |||||||| |||||| ||||||||||||||||| || | |||||||| |||||| ||||| ||| | |||||||||    
T  37922972 aaaatggt-aaaagtaatgaatttaactttttagaagtcaaaatattattgaatccaatgcaaacatactactttt 37923046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 8210213 - 8210167
Alignment:
Q  11 tggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttg 57  Q
    ||||||||| ||||||||| |||||||||||| |||||| |||||||    
T  8210213 tggtgaaaaatgatgaattcaactttttaaaagttaaaaaattgttg 8210167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 8810565 - 8810507
Alignment:
Q  8 aaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatg 66  Q
    |||||||||||||| ||  ||||||||||||||||||||||| ||| ||| ||| ||||    
T  8810565 aaatggtgaaaagtaatagatttaactttttaaaaattaaaaaattattgtatttaatg 8810507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 43285274 - 43285216
Alignment:
Q  5 gaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattca 63  Q
    ||||||||||||||||||||  |||| | |||| |||| |||||| |||||||||||||    
T  43285274 gaaaaatggtgaaaagtgatagatttgatttttgaaaagttaaaaaattgttgaattca 43285216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 31554892 - 31554831
Alignment:
Q  56 tgaattcaatgtaaataaactacttttgatttccttaacaagtgtccttaaagcattggtta 117  Q
    |||||||||||||| || || ||||||| |||||||||| | |||||||| |||| ||||||    
T  31554892 tgaattcaatgtaagtataccacttttggtttccttaaccattgtccttacagcaatggtta 31554831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 40719869 - 40719820
Alignment:
Q  154 tgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttctcc 203  Q
    |||||||||||||| ||| ||||||| || |||||| |||||||||||||    
T  40719869 tgtgaccaaacactttttctttggtcatgcgaccatattagaatttctcc 40719820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 5129493 - 5129533
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaa 42  Q
    ||||||||||| ||||||||||| ||||||| |||||||||    
T  5129493 attgaaaaatgatgaaaagtgataaatttaattttttaaaa 5129533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 11264489 - 11264397
Alignment:
Q  14 tgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtccttaa 106  Q
    |||||| | |||||||||||||||||||| || | |||||||||||| ||||  |||   |||| || | ||||||||||||| || ||||||    
T  11264489 tgaaaaataatgaatttaactttttaaaagttgatatattgttgaatccaatacaaacctactaattataatttccttaacaaatgcccttaa 11264397  T

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Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 16782361 - 16782313
Alignment:
Q  152 tgtgtgaccaaacactatttgtttggtcttgtgaccatgttagaatttc 200  Q
    |||||| ||||||||||||| ||||||||| ||| ||| ||||||||||    
T  16782361 tgtgtgtccaaacactatttatttggtcttatgatcatattagaatttc 16782313  T

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Target: scaffold0144 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 39660 - 39569
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| ||||| ||||||| ||| |||||||||||||||||| | || ||  |||||||||||||||||||| |||||||||| ||||||||||    
T  39660 tattggaaaatagtgaaaactgaagaatttaactttttaaaagtcaacat--tgttgaattcaatgtaaatatactacttttggtttccttaac 39569  T

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Target: scaffold0289 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 12397 - 12443
Alignment:
Q  155 gtgaccaaacactatttgtttggtcttgtgaccatgttagaatttct 201  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  12397 gtgaccaaatactttttgtttggtcttgtgaccatgttagaatttct 12443  T

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Target: scaffold0101 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 11088 - 11145
Alignment:
Q  6 aaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattca 63  Q
    |||| |||||||||  ||||||||||||||||||||| ||||||||||||| ||||||    
T  11088 aaaagtggtgaaaaaagatgaatttaactttttaaaagttaaaatattgttaaattca 11145  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 392169 - 392226
Alignment:
Q  2 attgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 59  Q
    ||||||||||||| ||||||||| ||||||||||||||||| | ||||| ||||||||    
T  392169 attgaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 392226  T

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Target: scaffold2122 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold2122
Description:

Target: scaffold2122; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 654 - 716
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattca 63  Q
    ||||| |||||||||||||||  |||||| |||||||||||| |||||| |||||||| ||||    
T  654 tattggaaaatggtgaaaagttgtgaattcaactttttaaaagttaaaaaattgttgatttca 716  T

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Target: scaffold0169 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 9046 - 9098
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgt 55  Q
    |||||||||||||||||||| |||||| |||||||||||| | |||| |||||    
T  9046 ttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaaaattgt 9098  T

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Target: scaffold0161 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 8773 - 8872
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaa-atattgttgaattcaatgtaaataaactacttttgatttccttaacaagtgtcctta 105  Q
    |||||| |||||| |||||||||||||||||| |||| | || |||| |||||||   ||  ||||  |||||||||||||| ||||||||||| |||||    
T  8773 aaaatgatgaaaaatgatgaatttaacttttttaaaagtcaatatatcgttgaatcttatacaaatctactacttttgattttcttaacaagtgacctta 8872  T

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Target: scaffold0062 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 16813 - 16900
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| ||||||| |||| ||| ||||||||||||| | ||||||||||||||  ||||| ||| |  |||||||||  |||||||||    
T  16813 aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaac 16900  T

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Target: scaffold0062; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 26981 - 27068
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| ||||||| |||| ||| ||||||||||||| | ||||||||||||||  ||||| ||| |  |||||||||  |||||||||    
T  26981 aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaac 27068  T

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Target: scaffold0062; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 37147 - 37234
Alignment:
Q  7 aaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattcaatgtaaataaactacttttgatttccttaac 94  Q
    ||||| ||||||| |||| ||| ||||||||||||| | ||||||||||||||  ||||| ||| |  |||||||||  |||||||||    
T  37147 aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaac 37234  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 62616 - 62662
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaa 49  Q
    |||||||||||||||||||| |||||| |||||| ||||| ||||||    
T  62616 ttgaaaaatggtgaaaagtgttgaattcaactttctaaaagttaaaa 62662  T

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Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 69948 - 69994
Alignment:
Q  3 ttgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaa 49  Q
    |||||||||||||||||||| |||||| |||||| ||||| ||||||    
T  69948 ttgaaaaatggtgaaaagtgttgaattcaactttctaaaagttaaaa 69994  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 97849 - 97788
Alignment:
Q  1 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaattca 63  Q
    |||| ||||||||||||||||||  ||||||||||| | ||| |||||||||||| |||||||    
T  97849 tattaaaaaatggtgaaaagtgaaaaatttaactttct-aaagttaaaatattgtagaattca 97788  T

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