View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19878_high_81 (Length: 315)

Name: NF19878_high_81
Description: NF19878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19878_high_81
NF19878_high_81
[»] chr2 (7 HSPs)
chr2 (13-308)||(22827354-22827643)
chr2 (91-315)||(16878472-16878695)
chr2 (91-315)||(16990605-16990828)
chr2 (90-260)||(19070-19240)
chr2 (91-307)||(6655-6870)
chr2 (97-307)||(21338553-21338763)
chr2 (142-261)||(29791054-29791174)
[»] scaffold0042 (1 HSPs)
scaffold0042 (25-310)||(10027-10313)
[»] chr1 (6 HSPs)
chr1 (17-315)||(24057867-24058158)
chr1 (101-310)||(23308208-23308417)
chr1 (179-315)||(43516598-43516734)
chr1 (128-285)||(24090356-24090512)
chr1 (137-239)||(10215863-10215965)
chr1 (137-224)||(10215991-10216078)
[»] chr7 (6 HSPs)
chr7 (97-315)||(39888526-39888742)
chr7 (97-309)||(3083319-3083529)
chr7 (20-315)||(15561776-15562055)
chr7 (142-261)||(11245506-11245626)
chr7 (90-150)||(17147486-17147546)
chr7 (90-147)||(18380601-18380658)
[»] chr8 (9 HSPs)
chr8 (17-315)||(24539761-24540054)
chr8 (22-307)||(19440678-19440962)
chr8 (22-307)||(19576828-19577112)
chr8 (80-226)||(23807823-23807971)
chr8 (141-259)||(25239280-25239399)
chr8 (141-261)||(25188805-25188926)
chr8 (137-237)||(21539458-21539558)
chr8 (200-259)||(30613627-30613686)
chr8 (90-157)||(23811003-23811070)
[»] chr4 (11 HSPs)
chr4 (17-315)||(28086368-28086669)
chr4 (91-307)||(10701973-10702188)
chr4 (91-307)||(10915743-10915958)
chr4 (166-307)||(10668933-10669073)
chr4 (166-307)||(10882572-10882712)
chr4 (97-315)||(14283001-14283216)
chr4 (91-296)||(11169594-11169801)
chr4 (98-307)||(14817315-14817523)
chr4 (90-259)||(14827135-14827304)
chr4 (91-150)||(22674684-22674743)
chr4 (141-249)||(21324010-21324120)
[»] chr6 (4 HSPs)
chr6 (15-296)||(9345273-9345556)
chr6 (179-309)||(26228320-26228449)
chr6 (91-307)||(16262010-16262224)
chr6 (235-296)||(14733262-14733323)
[»] chr3 (5 HSPs)
chr3 (91-306)||(22800918-22801134)
chr3 (179-315)||(22805791-22805927)
chr3 (179-307)||(19243688-19243816)
chr3 (179-315)||(21950542-21950678)
chr3 (187-262)||(3575746-3575821)
[»] chr5 (4 HSPs)
chr5 (92-261)||(37984590-37984761)
chr5 (17-226)||(29253145-29253351)
chr5 (159-259)||(21231260-21231361)
chr5 (91-150)||(22752537-22752597)
[»] scaffold0290 (1 HSPs)
scaffold0290 (97-226)||(5507-5636)
[»] scaffold0005 (2 HSPs)
scaffold0005 (98-307)||(22188-22396)
scaffold0005 (90-259)||(12405-12574)
[»] scaffold0047 (1 HSPs)
scaffold0047 (90-259)||(23945-24114)
[»] scaffold0627 (1 HSPs)
scaffold0627 (25-169)||(1198-1343)


Alignment Details
Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 308
Target Start/End: Original strand, 22827354 - 22827643
Alignment:
Q  13 aatatatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatccattctttatgttagaagttag 112  Q
    ||||||||||||||||||||||||||||||||||||  ||||  |||||||||||||  |||||||| ||||| |||      |||||||||||||||||    
T  22827354 aatatatcttcataacttgttctattgcataagcttattcttatctcgaaacatatcgtaatcatat-catattcatt-----tttatgttagaagttag 22827447  T
Q  113 catgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaag 212  Q
    | |||||||||||||||||| ||||||||||||||||||||  ||  | |||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  22827448 cgtgtaacaaacaacattatcttggttcattttacggagtgcttcgagaggagtaaccccgagtacattcccttacttgaccgatgaaaacctaactaag 22827547  T
Q  213 gtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataa 308  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||   | ||||||| ||||||||||||||||||||||||||||||||||    
T  22827548 gtacatcggactccctcattgacgtgcgggcctaccttgcggagcgtatctcgttcccctgacgagaacctctcgtatcccccttggcgtggataa 22827643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 91 - 315
Target Start/End: Complemental strand, 16878695 - 16878472
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| ||||||||| ||||||| |  |||||||||  |||| ||||||||||||||||||||  || ||||||||||||||||||||| ||||| ||||    
T  16878695 cattcattatgttaggagttagcgttgaacaaacaatgttatcttggttcattttacggagtgcatcgggtggagtaaccccgagtacattcccttactt 16878596  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||||| ||| | |||| | |||||||||||||||    
T  16878595 gaccgatgaaaacctagctaaggtacaccggactccctcagtgacatgcaggcctaccttgtggagcgtatcctgtttccctcg-gagaacctctcgtat 16878497  T
Q  291 cccccttggcgtggataacgaaaag 315  Q
    |||||||||||||||||||| ||||    
T  16878496 cccccttggcgtggataacggaaag 16878472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 91 - 315
Target Start/End: Complemental strand, 16990828 - 16990605
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| ||||||||| ||||||| |  |||||||||  |||| ||||||||||||||||||||  || ||||||||||||||||||||| ||||| ||||    
T  16990828 cattcattatgttaggagttagcgttgaacaaacaatgttatcttggttcattttacggagtgcatcgggtggagtaaccccgagtacattcccttactt 16990729  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||||| ||| | |||| | |||||||||||||||    
T  16990728 gaccgatgaaaacctagctaaggtacaccggactccctcagtgacatgcaggcctaccttgtggagcgtatcctgtttccctcg-gagaacctctcgtat 16990630  T
Q  291 cccccttggcgtggataacgaaaag 315  Q
    |||||||||||||||||||| ||||    
T  16990629 cccccttggcgtggataacggaaag 16990605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 90 - 260
Target Start/End: Complemental strand, 19240 - 19070
Alignment:
Q  90 ccattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcact 189  Q
    |||||| |||||||||| |||||| |  ||||||||| ||||| |  |||||||||||||||||| || ||||| |||||||||||||||||| |  ||     
T  19240 ccattcattatgttagaggttagcgttgaacaaacaatattatctgagttcattttacggagtgtatcgggtggcgtaaccccgagtacaatctcataca 19141  T
Q  190 tgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgta 260  Q
    |||||||||||  ||||||||||||||||| |||| |||||||| |||||||||| ||||||||| |||||    
T  19140 tgaccgatgaattcctagctaaggtacatcagacttcctcagtgtcgtgcgggcccaccttgcggtgcgta 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 307
Target Start/End: Complemental strand, 6870 - 6655
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| |||||||||| |||||| |  ||||||||| ||||| |  |||||||||| ||||||| || ||||||||||||| ||||||||||||  || |    
T  6870 cattcattatgttagaggttagcgttgaacaaacaatattatctgagttcattttatggagtgtatcgggtggagtaaccctgagtacaatcccatacat 6771  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    |||| |||||  ||||||||||| ||||| ||||||||||||| ||||||||||  ||||||| ||| ||| | | |||||||||| ||| | || ||||    
T  6770 gacctatgaattcctagctaaggcacatcagactccctcagtgtcgtgcgggccccccttgcgaagcttatcccgttcccctggcgtgaatcccttgtat 6671  T
Q  291 cccccttggcgtggata 307  Q
    ||||| |||||||||||    
T  6670 ccccc-tggcgtggata 6655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 97 - 307
Target Start/End: Complemental strand, 21338763 - 21338553
Alignment:
Q  97 ttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    |||||||||| |||| | |  ||||||||| ||||| |  |||||||||| ||||||| || ||||||||||||||||||||||||||  || |||||||    
T  21338763 ttatgttagaggttaacgttgaacaaacaatattatctgagttcattttatggagtgtatcgggtggagtaaccccgagtacaatcccatacatgaccga 21338664  T
Q  197 tgaaaacctagctaaggtacatcggactccctcagtgacgtgcggg-cctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccc 295  Q
    ||||  ||||||||||| |||| | |||||||||||| |||||||| ||  ||||||||||| ||| | | |||||||| | ||||| || |||||||||    
T  21338663 tgaattcctagctaaggcacattgaactccctcagtgtcgtgcgggcccccccttgcggagcttatcccgttcccctggtgtgaaccccttgtatccccc 21338564  T
Q  296 ttggcgtggata 307  Q
     |||||||||||    
T  21338563 -tggcgtggata 21338553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 29791174 - 29791054
Alignment:
Q  142 ttttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcg 240  Q
    ||||||||| | | || ||||||||||||||||||||||||||| |||| |||||||||  ||||||||||||||||| |||||| |||| || ||||||    
T  29791174 ttttacggaatctatcgggtggagtaaccccgagtacaatcccttactttaccgatgaattcctagctaaggtacatcagactcctctcaatgtcgtgcg 29791075  T
Q  241 ggcctaccttgcggagcgtat 261  Q
    || |||||||| |||||||||    
T  29791074 ggtctaccttgtggagcgtat 29791054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 25 - 310
Target Start/End: Complemental strand, 10313 - 10027
Alignment:
Q  25 taacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatc--cattctttatgttagaagttagcatgtaacaa 122  Q
    ||||||||||||||| ||||||||| ||||  || ||||||||||| |||||||||||||  |||   ||||| |||||||||  |||||| |  |||||    
T  10313 taacttgttctattggataagcttgttcttttcttgaaacatatcataatcatattcataatcatgttcattcattatgttagcggttagcgttgaacaa 10214  T
Q  123 acaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcgga 222  Q
    | || |||||||  |||||||||||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10213 aaaatattatttgagttcattttacggagtgtatctg-tggagtaaccccgagtacaatcccttacttgaccgatgaaaacctagctaaggtacatcgga 10115  T
Q  223 ctccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataacg 310  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||  ||||||||    
T  10114 ctccctcagtgacgtgcgggcctaccttgcggagcgtatcccgttcccctggcgagaacctctcgtatcccccttggcaaggataacg 10027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 3e-85; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 24058158 - 24057867
Alignment:
Q  17 tatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatccattctttatgttagaagttagcatg 116  Q
    |||||||||||||||||||||||| |||||||  ||||  |||||||||||||  |||||||| ||||| ||||      ||||||||||||||||| ||    
T  24058158 tatcttcataacttgttctattgcgtaagcttattcttatctcgaaacatatcgtaatcatat-catatacatc------ttatgttagaagttagcgtg 24058066  T
Q  117 taacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtac 216  Q
    |||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  24058065 taacaaacaacattatcttggttcattttacggagtgcatcgagtggagtaaccccgagtacaatcccttacttgaccgatgaaaatctagctaaggtac 24057966  T
Q  217 atcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    ||| ||||||||| |||||||||||||||||||| ||||||||||   | |||||| |||||||||||||||||||| ||||| |||||||||| ||||    
T  24057965 atcagactccctcggtgacgtgcgggcctaccttacggagcgtatctcgttcccctagcgagaacctctcgtatccctcttggtgtggataacggaaag 24057867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 101 - 310
Target Start/End: Complemental strand, 23308417 - 23308208
Alignment:
Q  101 gttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaa 200  Q
    |||||| ||||||||  ||||||||   |||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  23308417 gttagaggttagcattgaacaaacatagttatcttggttcattttacggagtgtatcgggtggagtaaccccgagtacaatcccttacttgaccgatgaa 23308318  T
Q  201 aacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggc 300  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| | | | ||||||||||||||||||||||||||||||||    
T  23308317 aacctagctaaggtacatcggactctctcactgacgtgcgagcctaccttgcggagcgtatcccgtttccctggcgagaacctctcgtatcccccttggc 23308218  T
Q  301 gtggataacg 310  Q
    ||||||||||    
T  23308217 gtggataacg 23308208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 43516734 - 43516598
Alignment:
Q  179 aatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgag 278  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||   | |||||| | |||    
T  43516734 aatcccttacttgaccgatgaaaacctagctaaggtacatcagactccctcagtggcgtgcgggcctaccttgcggagtgtatctcgttccccttgtgag 43516635  T
Q  279 aacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    ||||| || ||||||| |||| |||||||||| ||||    
T  43516634 aacctgtcatatccccattggtgtggataacggaaag 43516598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 128 - 285
Target Start/End: Complemental strand, 24090512 - 24090356
Alignment:
Q  128 attattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactccc 227  Q
    ||||| ||| |||||||||||||| |   ||||||||||||||| ||||| ||||||  || ||||||||||||||||||||||| ||||||||||||||    
T  24090512 attatcttgattcattttacggagagcc-caggtggagtaaccctgagtataatcccatacatgaccgatgaaaacctagctaagatacatcggactccc 24090414  T
Q  228 tcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctct 285  Q
    ||||||||||| | |||  |||||  |||| ||| | | |||||||||||||||||||    
T  24090413 tcagtgacgtgtgtgccccccttgtagagcttatcccgttcccctggcgagaacctct 24090356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 10215965 - 10215863
Alignment:
Q  137 gttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacg 236  Q
    |||||||||||||||||| || | |||||||||||||||||||||| |  || |||||||||||  ||||||||||||||||||||||||||||||| ||    
T  10215965 gttcattttacggagtgtatcggatggagtaaccccgagtacaatctcatacatgaccgatgaattcctagctaaggtacatcggactccctcagtgtcg 10215866  T
Q  237 tgc 239  Q
    |||    
T  10215865 tgc 10215863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 10216078 - 10215991
Alignment:
Q  137 gttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggact 224  Q
    |||||||||||||||||| || | |||||||||||||||||||||| |  || |||||||||||  ||||||||||||||||||||||    
T  10216078 gttcattttacggagtgtatcggatggagtaaccccgagtacaatctcatacatgaccgatgaattcctagctaaggtacatcggact 10215991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 7e-83; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 97 - 315
Target Start/End: Original strand, 39888526 - 39888742
Alignment:
Q  97 ttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||  || ||||||||||||||||||||| ||||| ||||||||||    
T  39888526 ttatgttagaagttagcgtgtaacaaacaacattatcttggttcattttacggagtgcatcgggtggagtaaccccgagtacattcccttacttgaccga 39888625  T
Q  197 tgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccct 296  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | | ||||||   |||||||||||||||||||||    
T  39888626 tgaaaacctagctaaggtacaccggactccctcagtgacgtgcgggcctaccttgcggagcgtatcccgttcccct--tgagaacctctcgtatccccct 39888723  T
Q  297 tggcgtggataacgaaaag 315  Q
    |||||||||||||| ||||    
T  39888724 tggcgtggataacggaaag 39888742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 97 - 309
Target Start/End: Original strand, 3083319 - 3083529
Alignment:
Q  97 ttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||| | ||||||||    
T  3083319 ttatgttagaagttagcgtgtaacaa-caacattatcttggttcattttacggagtgtatcaggtggagtaaccccgagtacattcccttaattgaccga 3083417  T
Q  197 tgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccct 296  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||  ||||| ||| | | |||||| | |||||||||||||||||||||    
T  3083418 tgaaaacctagctaaggtacactggactccctcagtgacgtgcgggcctaccttttggagcatatcccgttccccttg-gagaacctctcgtatccccct 3083516  T
Q  297 tggcgtggataac 309  Q
    ||| |||||||||    
T  3083517 tggtgtggataac 3083529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 15562055 - 15561776
Alignment:
Q  20 cttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatccattctttatgttagaagttagcatgtaa 119  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| |  |||||||||||||| |||    ||||||||||| |||||||  |||||    
T  15562055 cttcataacttgttctattgcataagcttgttcttaactcgaaacataacgtaatcatattcatattcat----tctttatgttataagttagtgtgtaa 15561960  T
Q  120 caaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtac--aatccctcacttgaccgatgaaaacctagctaaggtaca 217  Q
    ||||||||||||| |||||||| ||||||              || ||| |||  | |   ||| ||| ||||||||| ||| |||||||||||||||||    
T  15561959 caaacaacattatcttggttcaatttacg--------------gattaatccctggaaattaattccttacttgaccgttgagaacctagctaaggtaca 15561874  T
Q  218 tcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| | | |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  15561873 tcggactccctcaatgacgtgcgggccgaccttgcggagcgtatcccgttccccttgcgagaacctctcgtatcccccttggcgtggataacggaaag 15561776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 11245626 - 11245506
Alignment:
Q  142 ttttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcg 240  Q
    ||||||||| ||| ||  |||||||||||||||||||||||||| |||| |||||||||  |||||||||||||||||||||||| || | || ||| ||    
T  11245626 ttttacggaatgtatcgagtggagtaaccccgagtacaatcccttactttaccgatgaattcctagctaaggtacatcggactcctcttaatgccgtacg 11245527  T
Q  241 ggcctaccttgcggagcgtat 261  Q
    |||| ||||||||||||||||    
T  11245526 ggccgaccttgcggagcgtat 11245506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 17147546 - 17147486
Alignment:
Q  90 ccattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacgga 150  Q
    |||||| ||||||||| ||||||| |||||||||||||||||| ||||||| |||||||||    
T  17147546 ccattcattatgttaggagttagcgtgtaacaaacaacattatcttggttcgttttacgga 17147486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 18380601 - 18380658
Alignment:
Q  90 ccattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttac 147  Q
    |||||| ||||||||| ||||||  |||||||||||||||||| ||||||| ||||||    
T  18380601 ccattcattatgttagcagttagtgtgtaacaaacaacattatcttggttcgttttac 18380658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 3e-82; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 24539761 - 24540054
Alignment:
Q  17 tatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatccattctttatgttagaagttagcatg 116  Q
    |||||||||||||| ||||||||||||| |||| ||||| |||| ||  || |  || ||||||||||| ||| |     |||||||||| |||||  ||    
T  24539761 tatcttcataacttattctattgcataaacttgttcttgtctcgtaatgtaacgtaaacatattcatattcattc-----ttatgttagatgttagtgtg 24539855  T
Q  117 taacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtac 216  Q
    |||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24539856 taacaaacaacattatcttggttcattttacggagtgcatcgagtggagtaaccccgagtacaatcccttacttgacagatgaaaacctagctaaggtac 24539955  T
Q  217 atcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    | | ||||||||||||||||||||||| ||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24539956 accagactccctcagtgacgtgcgggcataccttgcggaccgtatccagttcccctggcgagaacctctcgtatcccccttggcgtggataacggaaag 24540054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 307
Target Start/End: Complemental strand, 19440962 - 19440678
Alignment:
Q  22 tcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatc--cattctttatgttagaagttagcatgtaa 119  Q
    ||||||||| ||||||||||| |||||| ||||| || ||||||||||| |||||||| ||||  |||   ||||| |||||||||| |||||| |  ||    
T  19440962 tcataactttttctattgcatgagcttgttcttgtcttgaaacatatcataatcatat-cataatcatgttcattcattatgttagaggttagcgttgaa 19440864  T
Q  120 caaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatc 219  Q
    ||||||| ||||| |  ||||||||||||| |||| || ||||||||||||||||||||| ||||  || |||||||||||||||||| |||||||||||    
T  19440863 caaacaatattatctgagttcattttacggggtgtatcgggtggagtaaccccgagtacactcccatacatgaccgatgaaaacctagttaaggtacatc 19440764  T
Q  220 ggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggata 307  Q
    | ||||||||| || | || |||||  ||||||||||| |||   | |||||||||| |||||||| ||||||||| |||||||||||    
T  19440763 gaactccctcaatgtcatgtgggcc-cccttgcggagcttatcgcgttcccctggcgtgaacctcttgtatccccc-tggcgtggata 19440678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 307
Target Start/End: Complemental strand, 19577112 - 19576828
Alignment:
Q  22 tcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatc--cattctttatgttagaagttagcatgtaa 119  Q
    ||||||||| ||||||||||| |||||| ||||| || ||||||||||| |||||||| ||||  |||   ||||| |||||||||| |||||| |  ||    
T  19577112 tcataactttttctattgcatgagcttgttcttgtcttgaaacatatcataatcatat-cataatcatgttcattcattatgttagaggttagcgttgaa 19577014  T
Q  120 caaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatc 219  Q
    ||||||| ||||| |  ||||||||||||| |||| || ||||||||||||||||||||| ||||  || |||||||||||||||||| |||||||||||    
T  19577013 caaacaatattatctgagttcattttacggggtgtatcgggtggagtaaccccgagtacactcccatacatgaccgatgaaaacctagttaaggtacatc 19576914  T
Q  220 ggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggata 307  Q
    | ||||||||| || | || |||||  ||||||||||| |||   | |||||||||| |||||||| ||||||||| |||||||||||    
T  19576913 gaactccctcaatgtcatgtgggcc-cccttgcggagcttatcgcgttcccctggcgtgaacctcttgtatccccc-tggcgtggata 19576828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 226
Target Start/End: Complemental strand, 23807971 - 23807823
Alignment:
Q  80 tcatatccat--ccattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagta 177  Q
    ||||||||||  |||||| |||||||||| |||||  |||||| ||||||||||| ||||||||||||||||||||| || | |||||||||||||| ||    
T  23807971 tcatatccatagccattcattatgttagaggttagtgtgtaacgaacaacattatcttggttcattttacggagtgtatcggatggagtaaccccgatta 23807872  T
Q  178 caatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc 226  Q
    |||||||| |||||| |||||||  ||||||||||||||||| ||||||    
T  23807871 caatcccttacttgatcgatgaattcctagctaaggtacatcagactcc 23807823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 25239280 - 25239399
Alignment:
Q  141 attttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgc 239  Q
    |||||||||||||| || ||||||||||||||||||| ||||||  ||||||||||||||  ||||||||||||||||| |||||| ||||||| |||||    
T  25239280 attttacggagtgtatcgggtggagtaaccccgagtataatcccatacttgaccgatgaattcctagctaaggtacatcagactcctctcagtgtcgtgc 25239379  T
Q  240 gggcctaccttgcggagcgt 259  Q
    |||||||||||| |||||||    
T  25239380 gggcctaccttgtggagcgt 25239399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 25188926 - 25188805
Alignment:
Q  141 attttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgc 239  Q
    ||||||| |||||| || |||||||||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||| || | || |||||    
T  25188926 attttacagagtgtatcgggtggagtaacctcgagtacaatcccttactttaccgatgaaatcctagctaaggtacatcggactcctcttaatgtcgtgc 25188827  T
Q  240 gggcctaccttgcggagcgtat 261  Q
    |||||||||||||||| |||||    
T  25188826 gggcctaccttgcggaacgtat 25188805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 21539558 - 21539458
Alignment:
Q  137 gttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacg 236  Q
    ||||||||||||||| |   ||||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21539558 gttcattttacggagagccccaggtggagtaaccccgagtacaatcccatacatgaccgatgaaaacctagctaaggcacatcggactccctcagtgacg 21539459  T
Q  237 t 237  Q
    |    
T  21539458 t 21539458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 30613627 - 30613686
Alignment:
Q  200 aaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgt 259  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  30613627 aaacctagctagggtacatcagactccctcagtgtcgtgcgggcctaccttgcggagcgt 30613686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 23811070 - 23811003
Alignment:
Q  90 ccattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtc 157  Q
    |||||| |||| ||||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||    
T  23811070 ccattcattattttagaggttagcgtgtaacaaataacattatcttggttcattttacggagtgtgtc 23811003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 28086368 - 28086669
Alignment:
Q  17 tatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccat--ccattctttatgttagaagttagca 114  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||| |||   ||||||||| |||||||||||||     
T  28086368 tatcgtcataacttgttctattgcataagcttgttcttaactcgaaacatatcgtaatcatattcatatgcataatcattctttaagttagaagttagcg 28086467  T
Q  115 tgtaacaaacaacattattttggttcattttacggagt-gtgtcaggtggagtaaccccg--agtacaatccctcacttgaccgatgaaaacctagctaa 211  Q
    |||||||||||||||||| ||||||||||||||||| |  |  | |||||||||||||||  |||  ||||||| |||||||||||||||||||||||||    
T  28086468 tgtaacaaacaacattatcttggttcattttacggattaatcccgggtggagtaaccccggaagt-taatcccttacttgaccgatgaaaacctagctaa 28086566  T
Q  212 ggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataacga 311  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||| |   | |||| | |||||||||||||||||||||||||||||||||||     
T  28086567 ggtacatcggactccctctgtgacgtgcgggcctaccttacggagcgtatcccatttcccttg-gagaacctctcgtatcccccttggcgtggataacgg 28086665  T
Q  312 aaag 315  Q
    ||||    
T  28086666 aaag 28086669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 91 - 307
Target Start/End: Complemental strand, 10702188 - 10701973
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| |||||||||| |||||| |  ||||||||   |||| ||||||| |||||| |||||  || ||||||||||||||||||||||||||| || |    
T  10702188 cattcattatgttagaggttagcgttgaacaaacatagttatcttggttcgttttacagagtgcatcgggtggagtaaccccgagtacaatcccttacat 10702089  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| |||||||| |||||||||||||||| | ||| |||||||||| |||||||| ||||    
T  10702088 gaccgatgaaaacctaggtaaggtacatcagactccctcagtgtcgtgcgggtctaccttgcggagcgtgtcctgttcccctggcgtgaacctcttgtat 10701989  T
Q  291 cccccttggcgtggata 307  Q
    ||||| |||||||||||    
T  10701988 ccccc-tggcgtggata 10701973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 91 - 307
Target Start/End: Complemental strand, 10915958 - 10915743
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| |||||||||| |||||| |  ||||||||   |||| ||||||| |||||| |||||  || ||||||||||||||||||||||||||| || |    
T  10915958 cattcattatgttagaggttagcgttgaacaaacatagttatcttggttcgttttacagagtgcatcgggtggagtaaccccgagtacaatcccttacat 10915859  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| |||||||| |||||||||||||||| | ||| |||||||||| |||||||| ||||    
T  10915858 gaccgatgaaaacctaggtaaggtacatcagactccctcagtgtcgtgcgggtctaccttgcggagcgtgtcctgttcccctggcgtgaacctcttgtat 10915759  T
Q  291 cccccttggcgtggata 307  Q
    ||||| |||||||||||    
T  10915758 ccccc-tggcgtggata 10915743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 166 - 307
Target Start/End: Original strand, 10668933 - 10669073
Alignment:
Q  166 taaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctg 265  Q
    |||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| | |||    
T  10668933 taaccccgagtacaatcccttacacgaccgatgaaaacctagataaggtacatcggactccctcagtgtcgtgcgggtctaccttgcggagcgtgtcctg 10669032  T
Q  266 atcccctggcgagaacctctcgtatcccccttggcgtggata 307  Q
     |||||||||| |||||||| ||||||||| |||||||||||    
T  10669033 ttcccctggcgtgaacctcttgtatccccc-tggcgtggata 10669073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 166 - 307
Target Start/End: Original strand, 10882572 - 10882712
Alignment:
Q  166 taaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctg 265  Q
    |||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| | |||    
T  10882572 taaccccgagtacaatcccttacacgaccgatgaaaacctagataaggtacatcggactccctcagtgtcgtgcgggtctaccttgcggagcgtgtcctg 10882671  T
Q  266 atcccctggcgagaacctctcgtatcccccttggcgtggata 307  Q
     |||||||||| |||||||| ||||||||| |||||||||||    
T  10882672 ttcccctggcgtgaacctcttgtatccccc-tggcgtggata 10882712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 315
Target Start/End: Complemental strand, 14283216 - 14283001
Alignment:
Q  97 ttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    |||| ||||| |||||| ||||||||||||  |||| | ||||  ||||||||||||  || |||||||||||||||| |||| ||||| |||| |||||    
T  14283216 ttatattagatgttagcgtgtaacaaacaa--ttatctgggttgcttttacggagtgcatcgggtggagtaaccccgaatacattcccttactt-accga 14283120  T
Q  197 tgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccc 295  Q
    ||||  | |||||||||| ||||||||||| || | || ||||| ||||||||||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  14283119 tgaattcttagctaaggtgcatcggactcctcttaatgccgtgcaggcctaccttgcggagcgtatcctgttccccttg-gagaacctctcgtatccccc 14283021  T
Q  296 ttggcgtggataacgaaaag 315  Q
    ||||||||||||||| ||||    
T  14283020 ttggcgtggataacggaaag 14283001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 296
Target Start/End: Original strand, 11169594 - 11169801
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggag--taaccccgagtacaatccctcac 188  Q
    ||||| |||||||||  |||||| |  ||||||||   |||| ||| ||||||||||||||||| || |||||||  |||||||||||||||||||  ||    
T  11169594 cattcattatgttaggggttagcgttgaacaaacatagttatcttgattcattttacggagtgtatcgggtggagagtaaccccgagtacaatcccatac 11169693  T
Q  189 ttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgt 288  Q
     ||||| ||||||||||| ||||||||||||||||||| |||||| ||||||| || |||||||||||| | | | | |||||||| | |||||||| ||    
T  11169694 atgacctatgaaaacctaactaaggtacatcggactccttcagtgtcgtgcggacccaccttgcggagcttgtcccgttcccctggtgtgaacctcttgt 11169793  T
Q  289 atccccct 296  Q
    ||||||||    
T  11169794 atccccct 11169801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 98 - 307
Target Start/End: Complemental strand, 14817523 - 14817315
Alignment:
Q  98 tatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    |||||||||| |||||| ||||||| ||||  |||| |  ||| |||||||||||||| || ||||||||||||||||||||||||||  || |||||||    
T  14817523 tatgttagaaagttagcgtgtaacatacaa--ttatctgagttgattttacggagtgtatcgggtggagtaaccccgagtacaatcccatacatgaccga 14817426  T
Q  197 tgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccc 295  Q
    ||||  |||||||||||||||||||||||| ||| ||| ||||| ||||||||||| ||||||| | | | |||||||  | |||||||| |||||||||    
T  14817425 tgaattcctagctaaggtacatcggactcctctcggtgccgtgcaggcctaccttgtggagcgtgtcccgttcccctgaggtgaacctcttgtatccccc 14817326  T
Q  296 ttggcgtggata 307  Q
     |||||||||||    
T  14817325 -tggcgtggata 14817315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 259
Target Start/End: Complemental strand, 14827304 - 14827135
Alignment:
Q  90 ccattctttatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcac 188  Q
    |||||| ||||||| ||| |||||| ||||||| ||||  |||| |  ||| |||||| ||||||  || |||||||||||||||||||||||| |  ||    
T  14827304 ccattcattatgttggaaagttagcgtgtaacatacaa--ttatctgagtttattttatggagtgcatcgggtggagtaaccccgagtacaatctcatac 14827207  T
Q  189 ttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgt 259  Q
     |||||||||||  |||||||||||||||||   |||| || | | |||||| |||||||||||||||||||    
T  14827206 atgaccgatgaattcctagctaaggtacatcaatctcctctgaattacgtgcaggcctaccttgcggagcgt 14827135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 22674684 - 22674743
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacgga 150  Q
    ||||| |||||||||| |||||| ||||||||||| |||||| ||||||| |||||||||    
T  22674684 cattcattatgttagaggttagcgtgtaacaaacagcattatcttggttcgttttacgga 22674743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 249
Target Start/End: Complemental strand, 21324120 - 21324010
Alignment:
Q  141 attttacggagtgtgtcaggtggagtaaccccgagtacaatccc-tcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtg 238  Q
    |||||||  ||||| || |||||||||||| ||||||||||||| | || | |||||||||  |||||||||||||||  ||||||| || | || ||||    
T  21324120 attttacaaagtgtatcgggtggagtaacctcgagtacaatcccgtaacataaccgatgaattcctagctaaggtacactggactcctcttaatgccgtg 21324021  T
Q  239 cgggcctacct 249  Q
    |||||||||||    
T  21324020 cgggcctacct 21324010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 296
Target Start/End: Original strand, 9345273 - 9345556
Alignment:
Q  15 tatatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatc--cattctttatgttagaagttag 112  Q
    |||||| ||||||||| |||||||||||||||||| ||||  || ||||||||||  |||||||||||||  ||||  |||||  ||||||||| |||||    
T  9345273 tatatcatcataacttattctattgcataagcttgttcttatcttgaaacatatcgtaatcatattcataatcatcttcattcaatatgttagaggttag 9345372  T
Q  113 catgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaag 212  Q
    | |   ||||| || ||||| |  |||||||||||||||||| || ||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  9345373 cgttggacaaaaaatattatctaagttcattttacggagtgtatcgggtggagtaaccccgagtacaatcccatacatgaccgatgaaaacctagctaag 9345472  T
Q  213 gtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccct 296  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| | | |  ||||||||  || ||||| ||||||||||    
T  9345473 gtacatcggactccctcagtgtcgtgcgggcctaccttgcggagcgtgtcccgtccccctggcatgaccctcttgtatccccct 9345556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 309
Target Start/End: Original strand, 26228320 - 26228449
Alignment:
Q  179 aatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgag 278  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | | |||||| | |||    
T  26228320 aatcccttacttgaccgatgaaaacctagctaaggtacatcggactccctcggtgacgtgcgggcctaccatgcggagcgtatcccgttccccttg-gag 26228418  T
Q  279 aacctctcgtatcccccttggcgtggataac 309  Q
    |||||||||||||||||||||||||||||||    
T  26228419 aacctctcgtatcccccttggcgtggataac 26228449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 91 - 307
Target Start/End: Original strand, 16262010 - 16262224
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| |||||||||| |||||  |  ||||||||  ||||| ||| ||||||||||| | ||  ||   ||||||||||||||||||||||||| || |    
T  16262010 cattcattatgttagaggttagtgttgaacaaacataattatcttgattcattttacgaaatgcatcgactggagtaaccccgagtacaatcccttacat 16262109  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| | | |  ||||||||| |||||||| ||||    
T  16262110 gaccgatgaaa-cctagctaaggtacatcggactccctcagtgtcgtgcgggcctaccttgcagagcgtgtcccgtccccctggcgtgaacctcttgtat 16262208  T
Q  291 cccccttggcgtggata 307  Q
     ||||||||||||||||    
T  16262209 -ccccttggcgtggata 16262224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 14733323 - 14733262
Alignment:
Q  235 cgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccct 296  Q
    ||||||||||||| |||||||||||||  ||  |||||  || |||||||||||||||||||    
T  14733323 cgtgcgggcctactttgcggagcgtatcttgtccccctaacgtgaacctctcgtatccccct 14733262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 8e-55; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 91 - 306
Target Start/End: Original strand, 22800918 - 22801134
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||| || ||||||||||||||||||||||||||  ||||    
T  22800918 cattcattatgttagaagttagcgtgtaacaaacaacattatcttcattcattttacggagtgtatcgggtggagtaaccccgagtacaatcccatactt 22801017  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcg-ta 289  Q
      || ||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||| ||||||||| | |  ||||||||| |||||||| |  |    
T  22801018 tgccaatgaaaacctagcgaaggtatatcagactccctcagtgtcgtgcgggcctaccttgtggagcgtatcccgtccccctggcgtgaacctcttgaaa 22801117  T
Q  290 tcccccttggcgtggat 306  Q
    ||||||||||| |||||    
T  22801118 tcccccttggcatggat 22801134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 179 - 315
Target Start/End: Original strand, 22805791 - 22805927
Alignment:
Q  179 aatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgag 278  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||   | |||||| | |||    
T  22805791 aatcccttacttgaccgatgaaaacctagctaaagtacatcggactccctcagtgacatgcgggcctaccttgcggagcgtatcacgttccccttgtgag 22805890  T
Q  279 aacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  22805891 aacctctcgtatcccccttggcgttgataacggaaag 22805927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 19243688 - 19243816
Alignment:
Q  179 aatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgag 278  Q
    ||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||||| |||||||||||| | | |||||| | |||    
T  19243688 aatcccttacttgaccgacgaaaacctagctaaggtatatcagactccctcagtgacgtgcgagcctaccatgcggagcgtatcccgttccccttgtgag 19243787  T
Q  279 aacctctcgtatcccccttggcgtggata 307  Q
    |||||||||||||||||||||||||||||    
T  19243788 aacctctcgtatcccccttggcgtggata 19243816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 179 - 315
Target Start/End: Original strand, 21950542 - 21950678
Alignment:
Q  179 aatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgag 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||  ||| ||| ||||||||||| ||||||||| | | |||||| | |||    
T  21950542 aatcccttacttgaccgatgaaaacctagctaaggtacatcggacttcctcaacgacttgcaggcctaccttgtggagcgtatcccgttccccttgtgag 21950641  T
Q  279 aacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    |||||||||||||||||||||||||||||||| ||||    
T  21950642 aacctctcgtatcccccttggcgtggataacggaaag 21950678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 3575746 - 3575821
Alignment:
Q  187 acttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3575746 acttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcagagcgtatt 3575821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 92 - 261
Target Start/End: Original strand, 37984590 - 37984761
Alignment:
Q  92 attctttatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    |||| ||||||||||| |||||| |||||||||||||||||| |  ||| |||| || |||||| || |||| |||||||||||||||||||| | ||||    
T  37984590 attcattatgttagaaagttagcgtgtaacaaacaacattatctgagttgatttgacagagtgtatcgggtgcagtaaccccgagtacaatcctttactt 37984689  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgtat 261  Q
    ||||||||||  |||||||||||||||||||||||| || | || |||||||||||||||||||||||||||    
T  37984690 gaccgatgaattcctagctaaggtacatcggactcctcttaatgccgtgcgggcctaccttgcggagcgtat 37984761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 226
Target Start/End: Original strand, 29253145 - 29253351
Alignment:
Q  17 tatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatccattctttatgttagaagttagcatg 116  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||||||| |||  |||||||||||||| ||| |     ||||||||||| ||||| ||    
T  29253145 tatcttcattacttgttctattgcataaacttgctcttgactcgaaacaaatcgtaatcatattcatattcattc-----ttatgttagaaattagcgtg 29253239  T
Q  117 taacaaacaacattattttggttcattttacggagt-gtgtcaggtggagtaaccccg--agtacaatccctcacttgaccgatgaaaacctagctaagg 213  Q
    ||||||| |||||||| ||||||||||||||||| |  |  |  ||||||||||||||  |||  ||||||| ||||||| |||||||||||||||||||    
T  29253240 taacaaaaaacattatcttggttcattttacggattaatcccgagtggagtaaccccggaagt-taatcccttacttgactgatgaaaacctagctaagg 29253338  T
Q  214 tacatcggactcc 226  Q
    |||||||||||||    
T  29253339 tacatcggactcc 29253351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 21231361 - 21231260
Alignment:
Q  159 ggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagc 257  Q
    |||||||||||||||| ||||||||   || | |||||| ||  ||||||||| |||||||  ||||| ||||||| ||||||||||||||||| |||||    
T  21231361 ggtggagtaaccccgattacaatcctaaacataaccgattaattcctagctaaagtacatcatactcctctcagtgtcgtgcgggcctaccttgtggagc 21231262  T
Q  258 gt 259  Q
    ||    
T  21231261 gt 21231260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 22752537 - 22752597
Alignment:
Q  91 cattctttatgttaga-agttagcatgtaacaaacaacattattttggttcattttacgga 150  Q
    ||||| |||||||||| ||||||| |||||||||||||||||| ||||||| |||||||||    
T  22752537 cattcattatgttagagagttagcgtgtaacaaacaacattatcttggttcgttttacgga 22752597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 5636 - 5507
Alignment:
Q  97 ttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    |||||||||| ||||   |||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||||||||| |||| |||||    
T  5636 ttatgttagaggttaatgtgtaacaaacaacattatcttggttcgttttacggagtgtatcgggtggagtaaccccgagtacaatcccttactttaccga 5537  T
Q  197 tgaaaacctagctaaggtacatcggactcc 226  Q
    ||||  |||||||||||||||| |||||||    
T  5536 tgaattcctagctaaggtacattggactcc 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 98 - 307
Target Start/End: Original strand, 22188 - 22396
Alignment:
Q  98 tatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    |||||||||| |||||| ||||||| ||||  |||| |  ||| |||||||||||||| || ||||||||||||||||||||||||||  || |||||||    
T  22188 tatgttagaaagttagcgtgtaacatacaa--ttatctgagttgattttacggagtgtatcgggtggagtaaccccgagtacaatcccatacatgaccga 22285  T
Q  197 tgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccc 295  Q
    ||||  |||||||||||||||||||||||| ||| ||| ||||| ||||||||||| ||||||| | | | |||||||  | |||||||| |||||||||    
T  22286 tgaattcctagctaaggtacatcggactcctctcggtgccgtgcaggcctaccttgtggagcgtgtcccgttcccctgaggtgaacctcttgtatccccc 22385  T
Q  296 ttggcgtggata 307  Q
     |||||||||||    
T  22386 -tggcgtggata 22396  T

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Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 259
Target Start/End: Original strand, 12405 - 12574
Alignment:
Q  90 ccattctttatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcac 188  Q
    |||||| ||||||| ||| |||||| ||||||| ||||  |||| |  ||| |||||| ||||||  || |||||||||||||||||||||||| |  ||    
T  12405 ccattcattatgttggaaagttagcgtgtaacatacaa--ttatctgagtttattttatggagtgcatcgggtggagtaaccccgagtacaatctcatac 12502  T
Q  189 ttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgt 259  Q
     |||||||||||  |||||||||||||||||   |||| || | | |||||| |||||||||||||||||||    
T  12503 atgaccgatgaattcctagctaaggtacatcaatctcctctgaattacgtgcaggcctaccttgcggagcgt 12574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 259
Target Start/End: Complemental strand, 24114 - 23945
Alignment:
Q  90 ccattctttatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcac 188  Q
    |||||| ||||||| ||| |||||| ||||||| ||||  |||| |  ||| |||||| ||||||  || |||||||||||||||||||||||| |  ||    
T  24114 ccattcattatgttggaaagttagcgtgtaacatacaa--ttatctgagtttattttatggagtgcatcgggtggagtaaccccgagtacaatctcatac 24017  T
Q  189 ttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgt 259  Q
     |||||||||||  |||||||||||||||||   |||| || | | |||||| |||||||||||||||||||    
T  24016 atgaccgatgaattcctagctaaggtacatcaatctcctctgaattacgtgcaggcctaccttgcggagcgt 23945  T

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Target: scaffold0627 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 1343 - 1198
Alignment:
Q  25 taacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatcca--tccattctttatgttagaagttagcatgtaacaa 122  Q
    ||||||||||||||| ||||||||| ||||  || ||||||||||| |||||||||||||  ||  | ||||| |||||||||  |||||| |  |||||    
T  1343 taacttgttctattggataagcttgttcttttcttgaaacatatcataatcatattcataatcatgttcattcattatgttagcggttagcgttgaacaa 1244  T
Q  123 acaacattattttggttcattttacggagtgtgtcaggtggagtaac 169  Q
    | |  ||||| |  |||||||||||||||||| || |||||||||||    
T  1243 aaactattatctgagttcattttacggagtgtatc-ggtggagtaac 1198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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