View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19878_high_87 (Length: 299)

Name: NF19878_high_87
Description: NF19878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19878_high_87
NF19878_high_87
[»] chr3 (36 HSPs)
chr3 (18-219)||(44765230-44765431)
chr3 (26-205)||(47510716-47510895)
chr3 (217-289)||(40908268-40908340)
chr3 (223-286)||(8476310-8476373)
chr3 (223-289)||(24574578-24574644)
chr3 (223-289)||(26849025-26849091)
chr3 (223-289)||(47114859-47114925)
chr3 (216-289)||(11239115-11239188)
chr3 (223-289)||(6231503-6231569)
chr3 (223-289)||(20414467-20414533)
chr3 (223-289)||(28124438-28124504)
chr3 (223-289)||(44952311-44952377)
chr3 (225-289)||(33217917-33217981)
chr3 (31-175)||(54153869-54154013)
chr3 (223-282)||(9320450-9320509)
chr3 (218-289)||(20297796-20297867)
chr3 (49-175)||(42005348-42005474)
chr3 (32-204)||(4195301-4195473)
chr3 (222-289)||(1099201-1099268)
chr3 (215-289)||(48339751-48339825)
chr3 (50-175)||(3432611-3432736)
chr3 (218-289)||(31435920-31435991)
chr3 (217-283)||(43715304-43715370)
chr3 (240-289)||(31611004-31611053)
chr3 (34-172)||(32375193-32375332)
chr3 (218-289)||(43132154-43132225)
chr3 (105-162)||(25118634-25118691)
chr3 (26-70)||(47138843-47138887)
chr3 (229-289)||(53165733-53165793)
chr3 (215-266)||(28693420-28693471)
chr3 (223-270)||(45826798-45826845)
chr3 (114-200)||(9248375-9248461)
chr3 (246-287)||(9320405-9320446)
chr3 (236-289)||(10822733-10822786)
chr3 (152-209)||(25118835-25118892)
chr3 (223-267)||(29512704-29512748)
[»] chr1 (53 HSPs)
chr1 (31-175)||(12188634-12188778)
chr1 (223-289)||(46666712-46666778)
chr1 (218-289)||(2430500-2430571)
chr1 (218-289)||(8332018-8332089)
chr1 (218-289)||(39329612-39329683)
chr1 (223-289)||(3572567-3572633)
chr1 (223-289)||(20260088-20260154)
chr1 (224-289)||(36361786-36361851)
chr1 (217-289)||(1597338-1597410)
chr1 (48-200)||(2193255-2193407)
chr1 (218-289)||(6978774-6978845)
chr1 (223-289)||(2632856-2632922)
chr1 (223-289)||(9115841-9115907)
chr1 (223-289)||(25789767-25789833)
chr1 (31-205)||(26701498-26701672)
chr1 (223-289)||(39930461-39930527)
chr1 (31-175)||(4448979-4449124)
chr1 (217-289)||(52630777-52630849)
chr1 (223-286)||(5806293-5806356)
chr1 (223-289)||(6911497-6911563)
chr1 (223-289)||(9831872-9831938)
chr1 (223-289)||(47037461-47037527)
chr1 (223-289)||(49822919-49822985)
chr1 (225-289)||(38964683-38964747)
chr1 (222-289)||(32824926-32824993)
chr1 (223-289)||(12190179-12190245)
chr1 (223-289)||(14788727-14788793)
chr1 (81-202)||(8772420-8772541)
chr1 (31-171)||(44603632-44603772)
chr1 (224-289)||(51445083-51445148)
chr1 (223-283)||(35187466-35187526)
chr1 (223-289)||(4683376-4683442)
chr1 (223-289)||(5518506-5518572)
chr1 (81-170)||(15330851-15330939)
chr1 (223-284)||(32202333-32202394)
chr1 (50-205)||(42723901-42724058)
chr1 (220-287)||(50190764-50190831)
chr1 (223-289)||(48916024-48916090)
chr1 (223-283)||(1007757-1007817)
chr1 (50-175)||(8376327-8376455)
chr1 (55-175)||(29020087-29020207)
chr1 (230-289)||(37436630-37436689)
chr1 (82-175)||(4489290-4489384)
chr1 (82-175)||(7330543-7330636)
chr1 (80-175)||(19703789-19703885)
chr1 (217-289)||(52699462-52699534)
chr1 (223-270)||(29091689-29091736)
chr1 (227-289)||(30241013-30241075)
chr1 (224-270)||(31806759-31806805)
chr1 (75-137)||(50014186-50014248)
chr1 (123-172)||(16632762-16632811)
chr1 (227-283)||(13653861-13653917)
chr1 (81-133)||(14490006-14490058)
[»] chr4 (56 HSPs)
chr4 (31-175)||(37626717-37626861)
chr4 (48-175)||(33395334-33395461)
chr4 (31-175)||(11086268-11086416)
chr4 (223-289)||(27762901-27762967)
chr4 (216-289)||(41859042-41859115)
chr4 (48-206)||(41259990-41260148)
chr4 (223-289)||(45747798-45747864)
chr4 (50-175)||(53654294-53654419)
chr4 (223-283)||(55968002-55968062)
chr4 (218-289)||(42773955-42774026)
chr4 (223-289)||(40435907-40435973)
chr4 (223-289)||(48518893-48518959)
chr4 (223-289)||(48879332-48879398)
chr4 (50-175)||(21865189-21865313)
chr4 (50-175)||(21921050-21921174)
chr4 (56-173)||(52837941-52838058)
chr4 (63-175)||(14124201-14124313)
chr4 (217-289)||(27555417-27555489)
chr4 (217-289)||(39730289-39730361)
chr4 (218-289)||(936133-936204)
chr4 (218-289)||(18931760-18931831)
chr4 (223-289)||(6279923-6279989)
chr4 (223-289)||(23686794-23686860)
chr4 (223-289)||(34049599-34049665)
chr4 (223-289)||(35999693-35999759)
chr4 (216-289)||(25932448-25932521)
chr4 (220-289)||(41744219-41744288)
chr4 (216-289)||(43723271-43723344)
chr4 (225-289)||(27942750-27942814)
chr4 (218-289)||(18405231-18405302)
chr4 (223-289)||(13229991-13230057)
chr4 (223-289)||(39835309-39835375)
chr4 (223-289)||(47670369-47670435)
chr4 (223-280)||(25916037-25916094)
chr4 (223-288)||(32953531-32953596)
chr4 (218-283)||(39498838-39498903)
chr4 (218-283)||(39502177-39502242)
chr4 (225-281)||(34237424-34237480)
chr4 (217-289)||(45596275-45596347)
chr4 (26-171)||(48497420-48497560)
chr4 (34-109)||(48582241-48582316)
chr4 (61-175)||(54335154-54335268)
chr4 (233-289)||(8322252-8322308)
chr4 (223-283)||(30415915-30415975)
chr4 (60-175)||(37858203-37858319)
chr4 (226-289)||(10400810-10400873)
chr4 (34-109)||(16502386-16502461)
chr4 (223-289)||(50672910-50672973)
chr4 (31-173)||(35422420-35422562)
chr4 (86-168)||(41163046-41163128)
chr4 (114-175)||(35827806-35827867)
chr4 (48-175)||(388359-388487)
chr4 (75-171)||(32906130-32906226)
chr4 (47-104)||(6462312-6462369)
chr4 (127-171)||(48582187-48582231)
chr4 (123-175)||(51088906-51088958)
[»] chr7 (48 HSPs)
chr7 (32-171)||(23070190-23070329)
chr7 (31-175)||(31860253-31860397)
chr7 (213-289)||(27248296-27248372)
chr7 (223-289)||(8419591-8419657)
chr7 (215-289)||(33378845-33378919)
chr7 (56-175)||(40019468-40019586)
chr7 (218-289)||(48314125-48314196)
chr7 (223-289)||(35488191-35488257)
chr7 (223-289)||(45265050-45265116)
chr7 (224-289)||(48341365-48341430)
chr7 (216-283)||(9814213-9814280)
chr7 (218-289)||(11329996-11330067)
chr7 (223-289)||(27213857-27213923)
chr7 (223-289)||(38544197-38544263)
chr7 (223-289)||(39554186-39554252)
chr7 (223-289)||(40212892-40212958)
chr7 (223-289)||(43949248-43949314)
chr7 (223-289)||(45045629-45045695)
chr7 (223-289)||(48160593-48160659)
chr7 (218-289)||(9946987-9947058)
chr7 (226-289)||(25924642-25924705)
chr7 (223-289)||(27419226-27419292)
chr7 (34-171)||(25240279-25240416)
chr7 (225-289)||(38396370-38396434)
chr7 (223-289)||(41632366-41632432)
chr7 (223-289)||(44566048-44566114)
chr7 (223-288)||(45723211-45723276)
chr7 (217-289)||(16825350-16825422)
chr7 (218-289)||(28904183-28904254)
chr7 (223-289)||(34930467-34930534)
chr7 (89-175)||(7833554-7833640)
chr7 (223-285)||(25098076-25098138)
chr7 (225-289)||(45448945-45449009)
chr7 (94-175)||(31245262-31245343)
chr7 (57-205)||(2256419-2256566)
chr7 (50-132)||(3338445-3338527)
chr7 (81-175)||(22680726-22680820)
chr7 (223-280)||(44820266-44820323)
chr7 (121-214)||(46302496-46302589)
chr7 (218-270)||(11000725-11000777)
chr7 (217-289)||(25045614-25045685)
chr7 (223-283)||(41684024-41684084)
chr7 (223-267)||(45440933-45440977)
chr7 (223-289)||(6656226-6656292)
chr7 (214-287)||(31921741-31921813)
chr7 (223-267)||(30685994-30686038)
chr7 (223-267)||(37534105-37534149)
chr7 (57-109)||(46302898-46302950)
[»] chr8 (36 HSPs)
chr8 (26-200)||(27982289-27982459)
chr8 (26-200)||(28039591-28039761)
chr8 (218-289)||(35818421-35818492)
chr8 (218-289)||(38364084-38364155)
chr8 (205-289)||(25837914-25837997)
chr8 (223-289)||(18726621-18726687)
chr8 (217-289)||(12710648-12710720)
chr8 (213-289)||(16313499-16313575)
chr8 (34-205)||(41168600-41168772)
chr8 (218-289)||(37392543-37392614)
chr8 (223-289)||(1554356-1554422)
chr8 (227-289)||(3050012-3050074)
chr8 (223-289)||(32660935-32661001)
chr8 (224-289)||(26601941-26602006)
chr8 (223-289)||(10896219-10896285)
chr8 (223-289)||(42755870-42755936)
chr8 (214-287)||(41228707-41228780)
chr8 (218-289)||(38132734-38132805)
chr8 (223-289)||(26062147-26062213)
chr8 (75-161)||(44167179-44167265)
chr8 (220-283)||(7931248-7931311)
chr8 (226-289)||(18298115-18298178)
chr8 (91-205)||(12956217-12956330)
chr8 (26-205)||(22488765-22488950)
chr8 (226-283)||(40197081-40197138)
chr8 (216-270)||(5020485-5020539)
chr8 (220-262)||(8635664-8635706)
chr8 (57-175)||(31505532-31505649)
chr8 (114-213)||(29374565-29374664)
chr8 (223-270)||(33444628-33444675)
chr8 (223-289)||(7317376-7317442)
chr8 (223-289)||(21137134-21137200)
chr8 (80-172)||(41086840-41086932)
chr8 (116-173)||(3423745-3423802)
chr8 (223-267)||(25899657-25899701)
chr8 (222-254)||(31117545-31117577)
[»] chr5 (37 HSPs)
chr5 (25-175)||(30251917-30252067)
chr5 (218-289)||(22935909-22935980)
chr5 (218-289)||(28602558-28602629)
chr5 (223-289)||(4765562-4765628)
chr5 (61-175)||(10511097-10511210)
chr5 (223-289)||(12970532-12970598)
chr5 (223-289)||(19065507-19065573)
chr5 (54-175)||(42641114-42641235)
chr5 (223-289)||(29543017-29543083)
chr5 (24-204)||(7736271-7736451)
chr5 (218-289)||(6091718-6091789)
chr5 (223-289)||(555708-555774)
chr5 (223-289)||(14206823-14206889)
chr5 (223-289)||(18412212-18412278)
chr5 (224-289)||(11855658-11855723)
chr5 (31-171)||(1637946-1638086)
chr5 (31-171)||(31112389-31112529)
chr5 (216-283)||(32535946-32536013)
chr5 (223-289)||(36703877-36703943)
chr5 (144-210)||(20078349-20078415)
chr5 (223-289)||(27481360-27481426)
chr5 (227-288)||(8406898-8406959)
chr5 (242-289)||(8646412-8646459)
chr5 (81-175)||(25731217-25731312)
chr5 (48-175)||(33085276-33085403)
chr5 (81-172)||(1041925-1042015)
chr5 (215-270)||(42012173-42012228)
chr5 (82-163)||(4858077-4858157)
chr5 (62-175)||(7611938-7612051)
chr5 (31-128)||(35626634-35626731)
chr5 (114-202)||(1042052-1042140)
chr5 (75-175)||(17317370-17317470)
chr5 (223-270)||(6930666-6930713)
chr5 (221-276)||(20962606-20962661)
chr5 (223-270)||(26637045-26637092)
chr5 (116-174)||(34023294-34023352)
chr5 (34-175)||(14156967-14157108)
[»] chr2 (53 HSPs)
chr2 (216-289)||(42674656-42674729)
chr2 (59-205)||(31915043-31915189)
chr2 (223-289)||(346347-346413)
chr2 (223-289)||(14777500-14777566)
chr2 (223-289)||(39995133-39995199)
chr2 (217-289)||(4559562-4559634)
chr2 (218-289)||(21737397-21737468)
chr2 (223-289)||(2521678-2521744)
chr2 (223-289)||(6171794-6171860)
chr2 (223-289)||(9733848-9733914)
chr2 (223-289)||(11071608-11071674)
chr2 (216-289)||(17965986-17966059)
chr2 (217-289)||(34356696-34356768)
chr2 (221-289)||(37192525-37192593)
chr2 (226-289)||(5770115-5770178)
chr2 (31-175)||(31598007-31598152)
chr2 (61-204)||(38373335-38373478)
chr2 (223-289)||(2050869-2050935)
chr2 (61-203)||(12800755-12800896)
chr2 (223-289)||(37533955-37534021)
chr2 (49-201)||(8033260-8033410)
chr2 (225-289)||(28311701-28311765)
chr2 (223-289)||(20426485-20426551)
chr2 (31-125)||(37519640-37519733)
chr2 (223-289)||(41729132-41729198)
chr2 (223-289)||(41750532-41750598)
chr2 (225-289)||(638596-638660)
chr2 (62-174)||(2396688-2396800)
chr2 (225-289)||(37233432-37233496)
chr2 (218-289)||(40950856-40950927)
chr2 (226-288)||(26310273-26310335)
chr2 (223-289)||(45409253-45409319)
chr2 (57-205)||(31921207-31921354)
chr2 (223-289)||(27357965-27358031)
chr2 (225-289)||(14832813-14832877)
chr2 (104-192)||(35005203-35005291)
chr2 (50-185)||(16209806-16209941)
chr2 (223-289)||(6571690-6571756)
chr2 (224-289)||(13760948-13761013)
chr2 (223-267)||(40570045-40570089)
chr2 (223-289)||(1988314-1988380)
chr2 (31-120)||(168718-168806)
chr2 (224-289)||(18713660-18713725)
chr2 (147-210)||(14845960-14846023)
chr2 (34-175)||(29140171-29140315)
chr2 (75-175)||(31645430-31645530)
chr2 (101-175)||(18967743-18967816)
chr2 (236-289)||(14253525-14253578)
chr2 (217-270)||(24499462-24499515)
chr2 (218-270)||(7007595-7007647)
chr2 (31-99)||(8793884-8793952)
chr2 (223-267)||(25455049-25455093)
chr2 (151-210)||(37519772-37519831)
[»] chr6 (16 HSPs)
chr6 (223-289)||(1317021-1317087)
chr6 (223-289)||(7053572-7053638)
chr6 (31-175)||(29694304-29694448)
chr6 (223-289)||(2657703-2657769)
chr6 (223-289)||(8029336-8029402)
chr6 (218-289)||(14171016-14171087)
chr6 (224-289)||(18897924-18897989)
chr6 (45-202)||(1407311-1407465)
chr6 (228-289)||(16968928-16968989)
chr6 (223-288)||(7344085-7344150)
chr6 (80-175)||(23131461-23131556)
chr6 (48-175)||(27673667-27673793)
chr6 (215-289)||(6705759-6705833)
chr6 (223-257)||(10246224-10246258)
chr6 (99-175)||(6454545-6454620)
chr6 (119-171)||(7592729-7592781)
[»] scaffold0006 (2 HSPs)
scaffold0006 (216-289)||(201928-202001)
scaffold0006 (227-283)||(143622-143678)
[»] scaffold0189 (1 HSPs)
scaffold0189 (226-289)||(28957-29020)
[»] scaffold0007 (1 HSPs)
scaffold0007 (85-172)||(246537-246624)
[»] scaffold0042 (1 HSPs)
scaffold0042 (81-168)||(83557-83644)


Alignment Details
Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 44765230 - 44765431
Alignment:
Q  18 cctaaaaatatgagtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttc 117  Q
    |||||||||||| || |||||||| |||  ||||||| || |||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  44765230 cctaaaaatatgggtattgctaaccagtgccctaagggcagtggttaaggattccaataatggaaactttgttttggaaatacaagtctttacttatttc 44765329  T
Q  118 ttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcctaaaaatatttac 217  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||||||||| ||| ||  |||   |||||||||||||||||||||||||||||||    
T  44765330 ttagcaataattacaccacttttcaatgcaaacttacttattttaatactttaatcaataccccaaaaataatggttaacattctcctaaaaatatttac 44765429  T
Q  218 tt 219  Q
    ||    
T  44765430 tt 44765431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 205
Target Start/End: Complemental strand, 47510895 - 47510716
Alignment:
Q  26 tatgagtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaat 125  Q
    |||| ||||||||||| |||  ||||| | ||||| || | |||| || |||| |||||| ||||||||||||||||||||||   | ||||||| ||||    
T  47510895 tatgggtcttgctaaccagtgccctaaaggcaatgattgatgattccattaatagaaactatgtcttggaaatacaaatctttgtttttttcttaacaat 47510796  T
Q  126 aattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcct 205  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||| |||  |  ||| ||||||||||| |||||||||    
T  47510795 aattacaccatttttcgatacaaacttacttattttagtactttaatcaatgccccaaaggtaatggttagcattctcct 47510716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 40908340 - 40908268
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40908340 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 40908268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 8476310 - 8476373
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcct 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8476310 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcct 8476373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 24574644 - 24574578
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24574644 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 24574578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 26849091 - 26849025
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26849091 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 26849025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 47114859 - 47114925
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47114859 gtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatg 47114925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 11239115 - 11239188
Alignment:
Q  216 acttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  11239115 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 11239188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 6231503 - 6231569
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  6231503 gtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatg 6231569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 20414467 - 20414533
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  20414467 gtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatg 20414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 28124438 - 28124504
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  28124438 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgcctatg 28124504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 44952377 - 44952311
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  44952377 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 44952311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 33217917 - 33217981
Alignment:
Q  225 gtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  33217917 gtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatg 33217981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 54154013 - 54153869
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    ||||||||||| |||  ||||||| || ||||||| |||| || ||||  |||||||||| ||||||||||| ||||||| | ||||||| |||| ||||    
T  54154013 gtcttgctaaccagtgccctaagggcagtggttaaagattccattaataaaaactttgtcatggaaatacaagtctttacttttttcttatcaatgatta 54153914  T
Q  131 caccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
     |||| |||||  | ||||||||||||||||| ||||||||||||    
T  54153913 aaccacttttcgatgcaaacttacttattttagtactttaaccaa 54153869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 9320450 - 9320509
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatat 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9320450 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatat 9320509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 20297867 - 20297796
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  20297867 ttagggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgcctatg 20297796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 175
Target Start/End: Complemental strand, 42005474 - 42005348
Alignment:
Q  49 ctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaa 148  Q
    |||||| ||||||||||||||| || |||| |||| ||| | ||| |||||||||||||||| | ||||||| ||||||||| |||||||||   | |||    
T  42005474 ctaagggcaatggttaaggattccattaatagaaattttatattgaaaatacaaatctttacttttttcttaacaataattagaccatttttagatgcaa 42005375  T
Q  149 acttacttattttaatactttaaccaa 175  Q
    ||||||||||| || ||||||||||||    
T  42005374 acttacttattgtagtactttaaccaa 42005348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 204
Target Start/End: Original strand, 4195301 - 4195473
Alignment:
Q  32 tcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctat-ttcttagcaataatta 130  Q
    |||||||||| |||  | ||||| ||||||||||||||| || |||| | || ||||| |||||||||||| ||||||| | | |||||||||| |||||    
T  4195301 tcttgctaaccagtgccttaagggcaatggttaaggattccattaatagtaattttgttttggaaatacaattctttacttttcttcttagcaa-aatta 4195399  T
Q  131 caccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcc 204  Q
    ||||||||||   | ||||||||||||||||| ||||||||||||  |  |||| | |||||||| ||||||||    
T  4195400 caccatttttttatgcaaacttacttattttagtactttaaccaatgccccaagagcaatggttagcattctcc 4195473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 1099268 - 1099201
Alignment:
Q  222 agtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||||    
T  1099268 agtgtgtttgttttaagttataattgttgattcccgggaataaaatgatagaaatgtatatccctatg 1099201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 48339751 - 48339825
Alignment:
Q  215 tacttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||    
T  48339751 tacttaggatgtgtttgtttcaagttataattgttgatttccgggaataaaatgatataaatgtatatgcctatg 48339825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 3432736 - 3432611
Alignment:
Q  50 taaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaa 149  Q
    |||||||||||||||| |||| || |||| |||||||| ||||| ||||| || | ||||| |  |||||||||||||||||| |||||||   | ||||    
T  3432736 taaggacaatggttaatgattccattaatagaaactttatcttgaaaatataagtgtttactttgttcttagcaataattacatcattttttgatgcaaa 3432637  T
Q  150 cttacttattttaatactttaaccaa 175  Q
    |||| |||||||| ||||||||||||    
T  3432636 cttatttattttagtactttaaccaa 3432611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 31435920 - 31435991
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| ||||||||||||||||||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  31435920 ttagggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgatagaaatgtatatgcctatg 31435991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 43715304 - 43715370
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||||    
T  43715304 cttagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatg 43715370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 31611004 - 31611053
Alignment:
Q  240 tataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31611004 tataattgttgattcccgggaataaaatgattggaatgtatatgtctatg 31611053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 32375193 - 32375332
Alignment:
Q  34 ttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatcttta-cctatttcttagcaataattaca 132  Q
    |||||||| |||  ||||||| ||||||||||||||| || ||||   || ||||||||| |||| ||| | ||||   | |||||||||||||||||||    
T  32375193 ttgctaaccagtgccctaagggcaatggttaaggattccattaataagaattttgtcttgaaaattcaagtatttattttttttcttagcaataattaca 32375292  T
Q  133 ccatttttcagtacaaacttacttattttaatactttaac 172  Q
    ||| |||||| | | ||||||||||||||| |||||||||    
T  32375293 ccacttttcaatgctaacttacttattttagtactttaac 32375332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 43132154 - 43132225
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| ||||||||||||||||||||| |||||||||| || ||||||||| || ||||| ||||||||||||    
T  43132154 ttagggtgtgtttgtttcaagttatatttgttgattctcgagaataaaataataggaatatatatgcctatg 43132225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 25118634 - 25118691
Alignment:
Q  105 ctttacctatttcttagcaataattacaccatttttcagtacaaacttacttatttta 162  Q
    |||||| | |||||||||||| ||||||||| |||||| | |||||||||||||||||    
T  25118634 ctttacttttttcttagcaatgattacaccacttttcaatgcaaacttacttatttta 25118691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 47138843 - 47138887
Alignment:
Q  26 tatgagtcttgctaactagtatcctaaggacaatggttaaggatt 70  Q
    |||||||||||||||| |||||||||| || ||||||||||||||    
T  47138843 tatgagtcttgctaacgagtatcctaatgataatggttaaggatt 47138887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 53165733 - 53165793
Alignment:
Q  229 ttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||| ||||||||||||   ||||||||||| ||||| ||||||| ||||    
T  53165733 ttgtttcaagttatatttgttgattcccataaataaaatgataggaatatatatgcttatg 53165793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 28693420 - 28693471
Alignment:
Q  215 tacttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaa 266  Q
    ||||||||||||||||||||||||||||| |  | |||||||| ||||||||    
T  28693420 tacttagagtgtgtttgtttcaagttatattcatagattcccgagaataaaa 28693471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 45826845 - 45826798
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    ||||||||||||||||||||  |||| |||||| ||||||||||||||    
T  45826845 gtgtgtttgtttcaagttatcgttgtagattccagggaataaaatgat 45826798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 9248461 - 9248375
Alignment:
Q  114 tttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacatt 200  Q
    ||||||| |||| |||| |||| |||||  | |||||||| |||||||||||||||||||||  |  ||| ||||||||||| ||||    
T  9248461 tttcttatcaatgattataccacttttcgatgcaaacttatttattttaatactttaaccaatgccccaaaggtaatggttagcatt 9248375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 9320405 - 9320446
Alignment:
Q  246 tgttgattcccgggaataaaatgattggaatgtatatgccta 287  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||    
T  9320405 tgttgattctcgggaataaaatgataggaatgtatataccta 9320446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 10822733 - 10822786
Alignment:
Q  236 aagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||| ||||||||| |||||||||||||||| | | |||||||| |||||    
T  10822733 aagttatatttgttgatttccgggaataaaatgatagaagtgtatatgtctatg 10822786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 25118835 - 25118892
Alignment:
Q  152 tacttattttaatactttaaccaacactacaagggtaatggttaacattctcctaaaa 209  Q
    ||||||||||| |||||||||||| ||  ||||| ||||||||||||||  |||||||    
T  25118835 tacttattttagtactttaaccaatacctcaaggataatggttaacatttccctaaaa 25118892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 29512748 - 29512704
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 267  Q
    |||||||||||||||||||||||| || ||| | |||||||||||    
T  29512748 gtgtgtttgtttcaagttataatttttaatttctgggaataaaat 29512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 12188778 - 12188634
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    |||||||||| ||||  ||||||  |||| |||||||||| || |||| ||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  12188778 gtcttgctaattagtgccctaagagcaatcgttaaggattccattaatagaaactttgtcttggaaatacaaatttttacttttttcttagcaataatta 12188679  T
Q  131 caccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    |||||||||||| |||||| |||||||||||| ||||||| ||||    
T  12188678 caccatttttcaatacaaaattacttattttagtactttatccaa 12188634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 46666778 - 46666712
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46666778 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 46666712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 2430571 - 2430500
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2430571 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 2430500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 8332089 - 8332018
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8332089 ttagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatg 8332018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 39329683 - 39329612
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39329683 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgtctatg 39329612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 3572567 - 3572633
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3572567 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 3572633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 20260088 - 20260154
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20260088 gtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatg 20260154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 36361851 - 36361786
Alignment:
Q  224 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36361851 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 36361786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 1597338 - 1597410
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  1597338 cttagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatg 1597410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 200
Target Start/End: Original strand, 2193255 - 2193407
Alignment:
Q  48 cctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtaca 147  Q
    |||||| ||||| ||||||||||  | |||| |||||||| ||||| ||||| |||||||||| | ||||||| |||| ||||||||| |||||  |  |    
T  2193255 cctaagaacaatagttaaggattctattaatagaaactttatcttgaaaatataaatctttacttttttcttatcaatgattacaccacttttcgatgta 2193354  T
Q  148 aacttacttattttaatactttaaccaacactacaagggtaatggttaacatt 200  Q
    || |||||||||||||||||||||||||  | ||||||| |||||||||||||    
T  2193355 aatttacttattttaatactttaaccaatgccacaagggcaatggttaacatt 2193407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 6978845 - 6978774
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  6978845 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 6978774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 2632922 - 2632856
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  2632922 gtgtgtttgtttcaagttataattgttgattcccgggaataaaataataggaatgtatatgcctatg 2632856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 9115907 - 9115841
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  9115907 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 9115841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 25789833 - 25789767
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  25789833 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 25789767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 26701498 - 26701672
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    ||||||||||| | | |||||||| ||||||||||  || ||| |||| |||||||| ||||| |||||||||||||||| | ||||||| |||| ||||    
T  26701498 gtcttgctaaccattgtcctaagggcaatggttaaaaatctcattaatagaaactttctcttgaaaatacaaatctttacttttttcttatcaatcatta 26701597  T
Q  131 caccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcct 205  Q
    || || |||||  | ||||||||||||||| | ||||||||||||    |||| |  ||||||||||||||||||    
T  26701598 catcacttttcgatgcaaacttacttatttaagtactttaaccaatgtcacaatgacaatggttaacattctcct 26701672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 39930527 - 39930461
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  39930527 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 39930461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 4448979 - 4449124
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaacttt-gtcttggaaatacaaatctttacctatttcttagcaataatt 129  Q
    ||||||||||| | | |||||||| ||||||||||||||| || |||  |||||||| ||||| ||||||||| | || |  | ||||||| ||||||||    
T  4448979 gtcttgctaaccaatgtcctaagggcaatggttaaggattccattaacagaaacttttgtcttagaaatacaagttttaatttttttcttaacaataatt 4449078  T
Q  130 acaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    ||||||||||||| ||||||| || |||||||| ||||||||||||    
T  4449079 acaccatttttcaatacaaacctatttattttagtactttaaccaa 4449124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 52630849 - 52630777
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  52630849 cttagggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgtctatg 52630777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 5806293 - 5806356
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcct 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  5806293 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcct 5806356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 6911563 - 6911497
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  6911563 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataagaatgtatatgcctatg 6911497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 9831872 - 9831938
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  9831872 gtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatg 9831938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 47037527 - 47037461
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  47037527 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatg 47037461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 49822919 - 49822985
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  49822919 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatg 49822985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 38964683 - 38964747
Alignment:
Q  225 gtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  38964683 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcttatg 38964747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 32824993 - 32824926
Alignment:
Q  222 agtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| || ||||||||||||||||||    
T  32824993 agtgtgtttgtttcaagttataattgttgatttccggaaataaaataataggaatgtatatgcctatg 32824926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 12190179 - 12190245
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||||||||    
T  12190179 gtgtgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtacatgcctatg 12190245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 14788793 - 14788727
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| |||||    
T  14788793 gtgtgtttgtttcaagttataatttttgattcccgggaataaaataataggaatgtatatgtctatg 14788727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 202
Target Start/End: Original strand, 8772420 - 8772541
Alignment:
Q  81 aaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaacacta 180  Q
    ||||||||||||| |||||||| ||||||| | | |||| ||||||||||||||| |||||  | |||| |||||||||||| ||||||||||||  |      
T  8772420 aaactttgtcttgaaaatacaagtctttacttttgtcttggcaataattacaccacttttcgatgcaaatttacttattttagtactttaaccaatgccc 8772519  T
Q  181 caagggtaatggttaacattct 202  Q
    |||||| |||||||| ||||||    
T  8772520 caagggcaatggttagcattct 8772541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 44603772 - 44603632
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    ||||||||||| |||  ||||||| ||||||||||||||  || ||||  ||||||||||||| || ||||||||||||  | |||||||||||| ||||    
T  44603772 gtcttgctaaccagtgccctaagggcaatggttaaggatcccattaatataaactttgtcttgaaagtacaaatctttatttttttcttagcaatcatta 44603673  T
Q  131 cacca-tttttcagtacaaacttacttattttaatactttaa 171  Q
    ||||| ||||| ||  ||||||||||||||| | ||||||||    
T  44603672 caccactttttgag-gcaaacttacttatttaagtactttaa 44603632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 51445083 - 51445148
Alignment:
Q  224 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||    
T  51445083 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatacctatg 51445148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 35187526 - 35187466
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  35187526 gtgtgtttttttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatg 35187466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 4683376 - 4683442
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||| |||||||||||||||||| | ||||||||||| ||||||||||||||||||    
T  4683376 gtgtctttgtttcaatttataattgttgattcccagaaataaaatgataggaatgtatatgcctatg 4683442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 5518506 - 5518572
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| | ||| ||||||||||||    
T  5518506 gtgtgtttgtttcaagttatatttgttgattcccaggaataaaatgatagaaatatatatgcctatg 5518572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 15330939 - 15330851
Alignment:
Q  81 aaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatacttta 170  Q
    ||||||||||  | |||||||||||||||| | |||||||||||||||||||| |||||||  | ||||||| |||||||||||||||||    
T  15330939 aaactttgtcacgaaaatacaaatctttactt-tttcttagcaataattacacaatttttcgatgcaaactttcttattttaatacttta 15330851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 32202333 - 32202394
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgc 284  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| | |||||||||||    
T  32202333 gtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgc 32202394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 42724058 - 42723901
Alignment:
Q  50 taaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatct--ttacctattt-cttagcaataattacaccatttttcagtac 146  Q
    ||||| ||||||||||||||| || |||| ||||||||||||| ||||||||  |||  |||| | ||| |||| ||||||||||| | |||||  || |    
T  42724058 taagggcaatggttaaggattccattaatagaaactttgtctttgaaatacacgtctctttactttttttcttaacaataattacatcttttttg-gtgc 42723960  T
Q  147 aaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcct 205  Q
    ||||||| |||||||| || |||||||||  || |||||| |||| |||||||||||||    
T  42723959 aaacttatttattttagtaatttaaccaatgctccaagggcaatgattaacattctcct 42723901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 50190764 - 50190831
Alignment:
Q  220 agagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgccta 287  Q
    ||||||||||||||||||| |||||||||| ||| |||| ||||||||| | ||||||||||||||||    
T  50190764 agagtgtgtttgtttcaagatataattgttaatttccggaaataaaatgctaggaatgtatatgccta 50190831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 48916024 - 48916090
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||| |||||||||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  48916024 gtgtgtttatttcaagttatatttgttgattccagagaataaaatgatagaaatgtatatgcctatg 48916090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 1007817 - 1007757
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||  |||| ||||||    
T  1007817 gtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgatatgaatatatatg 1007757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 8376455 - 8376327
Alignment:
Q  50 taaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccat---ttttcagtac 146  Q
    |||||||||| |||||| |||||| |||| |||| ||| | ||||||||| || | ||||| | |||  || |||||||||||||||   ||||   | |    
T  8376455 taaggacaattgttaagaatttcattaatagaaattttattttggaaatataagtttttactttttttctaacaataattacaccattttttttttatgc 8376356  T
Q  147 aaacttacttattttaatactttaaccaa 175  Q
    |||||||||||||||||||||||||||||    
T  8376355 aaacttacttattttaatactttaaccaa 8376327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 29020207 - 29020087
Alignment:
Q  55 acaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttc-ttagcaataattacaccatttttcagtacaaactta 153  Q
    |||||| ||||||| |||| || | |||| |||||||| ||||||||||| |||||| ||  | |||||||||||||||| | |||| | |  ||| |||    
T  29020207 acaatgattaaggaattcattagtagaaattttgtcttagaaatacaaatttttacc-atcactttagcaataattacacaactttttattgtaaaatta 29020109  T
Q  154 cttattttaatactttaaccaa 175  Q
    ||||||||||||||||||||||    
T  29020108 cttattttaatactttaaccaa 29020087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 37436630 - 37436689
Alignment:
Q  230 tgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||| |||||| |||||||||| || |||||||||||| ||||||||||||| ||||    
T  37436630 tgtttcatgttatatttgttgattcacgagaataaaatgataggaatgtatatgcatatg 37436689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 4489290 - 4489384
Alignment:
Q  82 aactttgtcttggaaatacaaatctttacc-tatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    |||||||| ||||||||| || |||||||  | ||||||| |||| ||||||  | |||||  | ||||||||||||||||||||||||||||||    
T  4489290 aactttgtattggaaatataagtctttactatttttcttatcaatgattacataacttttctttgcaaacttacttattttaatactttaaccaa 4489384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 7330636 - 7330543
Alignment:
Q  82 aactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    |||||| ||||| |||||||| | ||| | | |||||||||||||||| || || |||||| | ||  ||||||||||||| ||||||||||||    
T  7330636 aactttatcttgaaaatacaagtatttgcttttttcttagcaataattgcatcacttttcaatgcatgcttacttattttagtactttaaccaa 7330543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 175
Target Start/End: Original strand, 19703789 - 19703885
Alignment:
Q  80 gaaactttgtcttggaaatacaaatctttacctat-ttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    |||| ||||||||| ||||||| || ||||| | | || ||||||||| |||||||||||||   ||||| |||| |||||||| ||||||||||||    
T  19703789 gaaaatttgtcttgtaaatacatatttttacttttgtttttagcaatagttacaccattttttgatacaagcttatttattttagtactttaaccaa 19703885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 52699462 - 52699534
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| ||| ||||||||||||||||| | || |||||| |||||||||||||| |||||  | |||||||||    
T  52699462 cttagggtgcgtttgtttcaagttatattcgtagattcctgggaataaaatgataggaatacacatgcctatg 52699534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 29091736 - 29091689
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    ||||||||||||||||||||| ||||||||||| |  |||||||||||    
T  29091736 gtgtgtttgtttcaagttatatttgttgattcctgataataaaatgat 29091689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 30241075 - 30241013
Alignment:
Q  227 gtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||| |||||||||   || ||||||||||| | ||| ||||||||||||    
T  30241075 gtttgtttcaagttatatttgttgatttttggtaataaaatgatagaaatatatatgcctatg 30241013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 31806759 - 31806805
Alignment:
Q  224 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    |||||||||||||||||||| |||| |||||| | ||||||||||||    
T  31806759 tgtgtttgtttcaagttatatttgtagattcctgagaataaaatgat 31806805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 50014186 - 50014248
Alignment:
Q  75 taatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatt 137  Q
    |||| |||||||||| || ||||||||||| ||||  | | ||||||||||||||||||||||    
T  50014186 taatagaaactttgtttttgaaatacaaatttttatttttgtcttagcaataattacaccatt 50014248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 16632762 - 16632811
Alignment:
Q  123 aataattacaccatttttcagtacaaacttacttattttaatactttaac 172  Q
    ||||||||||| |||||| | |||||| || |||||||||||||||||||    
T  16632762 aataattacacaattttttattacaaagttgcttattttaatactttaac 16632811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 13653917 - 13653861
Alignment:
Q  227 gtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    ||||||||||||||| | ||||||||||| | |||||||||||| | ||| ||||||    
T  13653917 gtttgtttcaagttaaatttgttgattcctgagaataaaatgatagaaatatatatg 13653861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 14490058 - 14490006
Alignment:
Q  81 aaactttgtcttggaaatacaaatctttacctatttcttagcaataattacac 133  Q
    ||||||||||||| ||||| |||| || |||| | ||||||||||||||||||    
T  14490058 aaactttgtcttgaaaatataaattttgacctttatcttagcaataattacac 14490006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 9e-36; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 37626861 - 37626717
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    ||||||||||||||| |||| ||| |||||||||||||||||| ||||  |||||||||||||||||||||| ||||||| | ||||||| |||| || |    
T  37626861 gtcttgctaactagtgtcctgagggcaatggttaaggatttcattaatataaactttgtcttggaaatacaagtctttacttttttcttatcaatgatca 37626762  T
Q  131 caccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    ||||| |||||  | ||||||||||||||||| ||||||||||||    
T  37626761 caccacttttcgatgcaaacttacttattttagtactttaaccaa 37626717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 33395461 - 33395334
Alignment:
Q  48 cctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtaca 147  Q
    ||||||| |||||||||| |||| |||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| |||| ||||   |  |    
T  33395461 cctaagggcaatggttaatgattccaataatggaaactttatcttggaaatacaagtctttacttatttcttagcaataattataccactttttgatgta 33395362  T
Q  148 aacttacttattttaatactttaaccaa 175  Q
    |||||||| |||||||||||||||||||    
T  33395361 aacttactcattttaatactttaaccaa 33395334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 11086416 - 11086268
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    ||||||||||| |||  ||||||| |||||||||||||||||| |||| | |||||| |||||||||||||||||||||| | ||||||||||||| |||    
T  11086416 gtcttgctaaccagtgccctaagggcaatggttaaggatttcattaataggaactttatcttggaaatacaaatctttacttttttcttagcaatattta 11086317  T
Q  131 cacc----atttttcagtacaaacttacttattttaatactttaaccaa 175  Q
     |||     |||||   ||||||||||||||||||||||||||||||||    
T  11086316 tacctaatttttttttatacaaacttacttattttaatactttaaccaa 11086268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 27762901 - 27762967
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27762901 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 27762967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 41859042 - 41859115
Alignment:
Q  216 acttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41859042 acttagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatg 41859115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 206
Target Start/End: Original strand, 41259990 - 41260148
Alignment:
Q  48 cctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtaca 147  Q
    ||||||| ||||||||||||||| || |||| |||||||||||||| |||||||| ||||||  | ||| ||| |||| ||||||||| |||||  | ||    
T  41259990 cctaagggcaatggttaaggattccattaatagaaactttgtcttgaaaatacaagtctttattttttttttatcaatgattacaccacttttcgatgca 41260089  T
Q  148 aacttacttattttaatactttaaccaacactacaagggtaatggttaacattctccta 206  Q
    |||||||||||||||||||||||||| |  |  |||||  ||||||||||||| |||||    
T  41260090 aacttacttattttaatactttaaccgatgcaccaaggacaatggttaacattttccta 41260148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 45747798 - 45747864
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45747798 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 45747864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 53654419 - 53654294
Alignment:
Q  50 taaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaa 149  Q
    |||||| |||||||||  ||| ||  ||| |||||||||||||| |||||||| ||||||| | |||||| |||||||||||||||||||||  | ||||    
T  53654419 taaggataatggttaaaaattccataaatagaaactttgtcttgtaaatacaagtctttacttttttcttcgcaataattacaccatttttcgatgcaaa 53654320  T
Q  150 cttacttattttaatactttaaccaa 175  Q
    | ||||||||||||||||||||||||    
T  53654319 catacttattttaatactttaaccaa 53654294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 55968002 - 55968062
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55968002 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 55968062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 42774026 - 42773955
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  42774026 ttagggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatg 42773955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 40435973 - 40435907
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  40435973 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 40435907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 48518893 - 48518959
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  48518893 gtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatg 48518959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 48879398 - 48879332
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  48879398 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 48879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 21865313 - 21865189
Alignment:
Q  50 taaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaa 149  Q
    ||||| ||||| ||||||||| || |||| | || ||| |||||||||||||||| ||||| | |||||||||||| |||||||||||||||  | ||||    
T  21865313 taaggtcaatgcttaaggattccattaatagtaattttatcttggaaatacaaatttttactt-tttcttagcaatgattacaccatttttcgatgcaaa 21865215  T
Q  150 cttacttattttaatactttaaccaa 175  Q
    |||||||||||||| |||||||||||    
T  21865214 cttacttattttaaaactttaaccaa 21865189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 21921174 - 21921050
Alignment:
Q  50 taaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaa 149  Q
    ||||| ||||| ||||||||| || |||| | || ||| |||||||||||||||| ||||| | |||||||||||| |||||||||||||||  | ||||    
T  21921174 taaggtcaatgcttaaggattccattaatagtaattttatcttggaaatacaaatttttactt-tttcttagcaatgattacaccatttttcgatgcaaa 21921076  T
Q  150 cttacttattttaatactttaaccaa 175  Q
    |||||||||||||| |||||||||||    
T  21921075 cttacttattttaaaactttaaccaa 21921050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 52837941 - 52838058
Alignment:
Q  56 caatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttact 155  Q
    |||||||||| ||||||| |||| ||||| || | |||||||||||  ||||||| | ||||||| ||||||||| ||||||||||  | ||||||||||    
T  52837941 caatggttaaagatttcattaatagaaacattattttggaaatacatgtctttacttttttcttaacaataattataccatttttcgatgcaaacttact 52838040  T
Q  156 tattttaatactttaacc 173  Q
    ||||||||||||||||||    
T  52838041 tattttaatactttaacc 52838058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 14124313 - 14124201
Alignment:
Q  63 taaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttatttta 162  Q
    |||||||| || |||| |||||||||| ||||||||| || | ||||| | ||||||||||| ||||||||||||||||  | |||| ||||||||||||    
T  14124313 taaggattccattaatagaaactttgttttggaaatataagtttttacttttttcttagcaaaaattacaccatttttcgatgcaaatttacttatttta 14124214  T
Q  163 atactttaaccaa 175  Q
    |||||||||||||    
T  14124213 atactttaaccaa 14124201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 27555489 - 27555417
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  27555489 cttagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgtctatg 27555417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 39730289 - 39730361
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  39730289 cttagggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgtctatg 39730361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 936204 - 936133
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  936204 ttagggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgattggaatatatatccctatg 936133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 18931831 - 18931760
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||| |||||    
T  18931831 ttagagtgtgtttgtttcaagttataattgttgatttctgggaataaaatgataggaatgtatatgtctatg 18931760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 6279923 - 6279989
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  6279923 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatatgaatgtatatgtctatg 6279989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 23686860 - 23686794
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  23686860 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatg 23686794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 34049599 - 34049665
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  34049599 gtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatg 34049665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 35999759 - 35999693
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  35999759 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatg 35999693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 25932521 - 25932448
Alignment:
Q  216 acttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||| |||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||||||||||    
T  25932521 acttagggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatg 25932448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 41744219 - 41744288
Alignment:
Q  220 agagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  41744219 agagtgtgtttatttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatg 41744288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 43723344 - 43723271
Alignment:
Q  216 acttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||| |||||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||||    
T  43723344 acttagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgcctatg 43723271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 27942814 - 27942750
Alignment:
Q  225 gtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  27942814 gtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatg 27942750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 18405231 - 18405302
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| || | ||||||||||||||||    
T  18405231 ttagggtgtgtttgtttcaagttataattgttgattcccgagaataaaattatagaaatgtatatgcctatg 18405302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 13229991 - 13230057
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| | ||||||||||||||||    
T  13229991 gtgtgtttgtttcaagttataattttttattcccgggaataaaatgatagaaatgtatatgcctatg 13230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 39835309 - 39835375
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||    
T  39835309 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcatatg 39835375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 47670435 - 47670369
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| | ||||||||||||||||    
T  47670435 gtgtgtttgtttcaagttataattgttgattcctggaaataaaatgatagaaatgtatatgcctatg 47670369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 25916037 - 25916094
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtat 280  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  25916037 gtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtat 25916094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 32953596 - 32953531
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctat 288  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  32953596 gtgtgtttgtctcaagttataattgttgattcccaggaacaaaatgataggaatgtatatgcctat 32953531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 39498903 - 39498838
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  39498903 ttagggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatg 39498838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 39502242 - 39502177
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  39502242 ttagggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatg 39502177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 34237424 - 34237480
Alignment:
Q  225 gtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtata 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  34237424 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtata 34237480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 45596347 - 45596275
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| ||| |||||||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  45596347 cttagggtgcgtttgtttcaagttataattgttgattttcgggaataaaatgatagaaatgtatatgcctatg 45596275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 48497560 - 48497420
Alignment:
Q  26 tatgagtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaat 125  Q
    |||| |||||| |||| ||||  |||||||||||||||||  |||  |||||   ||||||||||||| |||||||| ||||||  | ||||||| ||||    
T  48497560 tatgggtcttgttaaccagtagtctaaggacaatggttaaccatt--aataa---aaactttgtcttgaaaatacaagtctttatttttttcttatcaat 48497466  T
Q  126 aattacaccatttttcagtacaaacttacttattttaatactttaa 171  Q
     |||| |||| |||||  |||||||||| |||||||||||||||||    
T  48497465 gattataccacttttcgatacaaacttatttattttaatactttaa 48497420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 48582316 - 48582241
Alignment:
Q  34 ttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatcttta 109  Q
    ||||||||||||||| ||||  |||| ||||||||||||| |||| |||||||| ||||| |||||||||||||||    
T  48582316 ttgctaactagtatcttaagtgcaattgttaaggatttcattaatagaaactttatcttgaaaatacaaatcttta 48582241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 54335154 - 54335268
Alignment:
Q  61 gttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacacca-tttttcagtacaaacttacttatt 159  Q
    ||||| ||||||| |||| |||| ||| |||||||||||||| ||||||| | |||||| ||||||||| ||||| |||||   | ||||||||||||||    
T  54335154 gttaaagatttcactaatagaaattttatcttggaaatacaagtctttacttgtttctt-gcaataattgcaccactttttttatgcaaacttacttatt 54335252  T
Q  160 ttaatactttaaccaa 175  Q
    ||| ||||||||||||    
T  54335253 ttagtactttaaccaa 54335268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 8322308 - 8322252
Alignment:
Q  233 ttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||| |||||||||||||| | |||||||||| |||||    
T  8322308 ttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgtctatg 8322252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 30415975 - 30415915
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||| ||||| ||||||    
T  30415975 gtgtgtttgtttcaagttatatttgttgattcccgataataaaatgataggaatatatatg 30415915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 37858319 - 37858203
Alignment:
Q  60 ggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttatt 159  Q
    |||||||||||| | |||| |||||||| ||||| |||||||| | ||||| | ||||||||||||||||| | || |||||  | ||||||| ||||||    
T  37858319 ggttaaggatttgattaatagaaactttatcttgaaaatacaagtttttacttttttcttagcaataattaaatcacttttcgatgcaaacttccttatt 37858220  T
Q  160 t-taatactttaaccaa 175  Q
    | || ||||||||||||    
T  37858219 tatagtactttaaccaa 37858203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 10400810 - 10400873
Alignment:
Q  226 tgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||| |||||||||   |||||||||||||| | |||||||||| |||||    
T  10400810 tgtttgtttcaagttatatttgttgatttttgggaataaaatgatagaaatgtatatgtctatg 10400873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 16502386 - 16502461
Alignment:
Q  34 ttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatcttta 109  Q
    |||||||| |||  ||||||| ||||||||||||| | || || | ||||||||||||||||||||||||| ||||    
T  16502386 ttgctaaccagtgccctaagggcaatggttaaggaatccattagtagaaactttgtcttggaaatacaaattttta 16502461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 50672910 - 50672973
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||| ||||||  |||||||||||| |||||||||||||| |||||||||||| |||||    
T  50672910 gtgtgtttgttttaagtta--attgttgattcc-gggaataaaatgataggaatgtatatgtctatg 50672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 35422562 - 35422420
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    |||||||||||||||  ||||||  |||||||||| || |||  ||||  ||||||||  ||||||||| || |   ||| | | ||||| |||||||||    
T  35422562 gtcttgctaactagtgccctaagagcaatggttaaagaattctttaataaaaactttgcattggaaatataagtaactacttttgtcttatcaataatta 35422463  T
Q  131 caccatttttcagtacaaacttacttattttaatactttaacc 173  Q
    ||| |||||| | | |||||||||| ||||||| |||||||||    
T  35422462 cactattttttaatgcaaacttactaattttaacactttaacc 35422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 41163128 - 41163046
Alignment:
Q  86 ttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactt 168  Q
    ||||||| ||||||||| | ||||| | |||||||||||||||||||||| |||||  |  ||||| |||||||||| |||||    
T  41163128 ttgtcttagaaatacaagtatttacttttttcttagcaataattacaccacttttcgatgtaaactaacttattttagtactt 41163046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 35827806 - 35827867
Alignment:
Q  114 tttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    ||||||| ||||||||||| ||||||||    |||||||||||||||||||| |||||||||    
T  35827806 tttcttaacaataattacatcatttttcgaagcaaacttacttattttaatattttaaccaa 35827867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 388359 - 388487
Alignment:
Q  48 cctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttac-ctatttcttagcaataattacaccatttttcagtac 146  Q
    ||||||| ||||| |||| |||| || |||  |||||||||||||| ||||| || |||||||  | |||||| ||||||||| ||||  |||||  | |    
T  388359 cctaagggcaatgattaatgattccattaaaagaaactttgtcttgaaaatataagtctttacattttttcttcgcaataattgcacccattttccatgc 388458  T
Q  147 aaacttacttattttaatactttaaccaa 175  Q
    ||| ||| |||||||| ||||||||||||    
T  388459 aaatttatttattttagtactttaaccaa 388487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 32906130 - 32906226
Alignment:
Q  75 taatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaa 171  Q
    ||||||||| ||| ||||| ||||| || | ||||  | | ||||||||||||||||| ||||||| | | |||||||||| ||||||| |||||||    
T  32906130 taatggaaagtttatcttgtaaatataagtttttatttttgtcttagcaataattacaacattttttaatgcaaacttactaattttaacactttaa 32906226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 6462312 - 6462369
Alignment:
Q  47 tcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaat 104  Q
    ||||||||||||||||||||||||  | |||| |||| ||||||||  ||||||||||    
T  6462312 tcctaaggacaatggttaaggattctattaatagaaaatttgtcttcaaaatacaaat 6462369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 48582231 - 48582187
Alignment:
Q  127 attacaccatttttcagtacaaacttacttattttaatactttaa 171  Q
    |||||||||||||||  | ||||||||||||||||| ||||||||    
T  48582231 attacaccatttttcgatgcaaacttacttattttagtactttaa 48582187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 51088958 - 51088906
Alignment:
Q  123 aataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    ||||||||||| |||||| | |||||| |||||||||||| |||| |||||||    
T  51088958 aataattacacaattttttattacaaagttacttattttagtactctaaccaa 51088906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 23070190 - 23070329
Alignment:
Q  32 tcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattac 131  Q
    |||||||||| |||  ||||||||||||||||||| ||| || |||| ||||||||||||||||||||||| ||||||| | |||||||||||| |||||    
T  23070190 tcttgctaaccagtgccctaaggacaatggttaagaattccattaatagaaactttgtcttggaaatacaagtctttacttttttcttagcaatgattac 23070289  T
Q  132 accatttttcagtacaaacttacttattttaatactttaa 171  Q
    |||| |||||  | |||| |||||||||||||||||||||    
T  23070290 accacttttcgatgcaaatttacttattttaatactttaa 23070329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 31860253 - 31860397
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    ||||||||||| |||  ||||||| |||||||||| ||||  ||||||| |||||||||||||||||||||| ||||||| |  |||||| |||||||||    
T  31860253 gtcttgctaaccagtgccctaagggcaatggttaaagattctaataatgaaaactttgtcttggaaatacaagtctttactttcttcttatcaataatta 31860352  T
Q  131 caccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    |||||||||||  | |||||||||| |||||| ||||||||||||    
T  31860353 caccatttttcgatgcaaacttactcattttagtactttaaccaa 31860397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 27248372 - 27248296
Alignment:
Q  213 tttacttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27248372 tttatttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 27248296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 8419591 - 8419657
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8419591 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 8419657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 33378919 - 33378845
Alignment:
Q  215 tacttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33378919 tacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 33378845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 40019468 - 40019586
Alignment:
Q  56 caatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttact 155  Q
    ||||||||||||||| || ||||  |||||||||||||||||||||| ||||||| | |||||||||||||| |||| || |||||| | |||||||| |    
T  40019468 caatggttaaggattccattaataaaaactttgtcttggaaatacaagtctttacttttttcttagcaataa-tacatcacttttcaatgcaaacttatt 40019566  T
Q  156 tattttaatactttaaccaa 175  Q
    ||||||||||||||||||||    
T  40019567 tattttaatactttaaccaa 40019586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 48314196 - 48314125
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48314196 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 48314125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 35488191 - 35488257
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35488191 gtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatg 35488257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 45265050 - 45265116
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45265050 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgattggaatgtatatgcctatg 45265116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 48341430 - 48341365
Alignment:
Q  224 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48341430 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 48341365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 9814213 - 9814280
Alignment:
Q  216 acttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9814213 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatg 9814280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 11330067 - 11329996
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  11330067 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 11329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 27213857 - 27213923
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  27213857 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 27213923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 38544263 - 38544197
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  38544263 gtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgcctatg 38544197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 39554252 - 39554186
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  39554252 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 39554186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 40212958 - 40212892
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  40212958 gtgtgtttgtttcaagttataattgttgattcgcgggaataaaatgataggaatgtatatgcctatg 40212892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 43949314 - 43949248
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  43949314 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 43949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 45045695 - 45045629
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45045695 gtgtgtttgttttaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 45045629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 48160593 - 48160659
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  48160593 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 48160659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 9946987 - 9947058
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  9946987 ttagggtgtgtttgtttaaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatg 9947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 25924642 - 25924705
Alignment:
Q  226 tgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  25924642 tgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 25924705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 27419226 - 27419292
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||    
T  27419226 gtgtgtttgtttcaagttataattgctgattcccgggaataaaatgatagaaatgtatatgcctatg 27419292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 25240416 - 25240279
Alignment:
Q  34 ttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacac 133  Q
    |||||||| ||| |||||||||||||||||||| |||  | |||| |||| ||||||||||||| |||||||||||  | ||||||| |||| |||||||    
T  25240416 ttgctaaccagtgtcctaaggacaatggttaagaattctattaatagaaattttgtcttggaaaaacaaatctttatttttttcttatcaatgattacac 25240317  T
Q  134 catttttcagtacaaacttacttattttaatactttaa 171  Q
    || | |||  | ||||||||||||||||  ||||||||    
T  25240316 cactgttcgatgcaaacttacttattttcgtactttaa 25240279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 38396370 - 38396434
Alignment:
Q  225 gtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  38396370 gtgtttgttccaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 38396434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 41632366 - 41632432
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||||||    
T  41632366 gtgtgtttgtttcaagttataattgttgattcctgagaataaaatgatagaaatgtatatgcctatg 41632432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 44566114 - 44566048
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||||    
T  44566114 gtgtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatg 44566048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 45723276 - 45723211
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctat 288  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |||||||||||    
T  45723276 gtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgataggaatatatatgcctat 45723211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 16825350 - 16825422
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| ||||||||||||||||||||||||||| |||||  ||||||||||||| | ||||||||||||||||    
T  16825350 cttagggtgtgtttgtttcaagttataattgttaattcctaggaataaaatgatagaaatgtatatgcctatg 16825422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 28904183 - 28904254
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||||||||| | |||||||||| |||||    
T  28904183 ttagggtgtgtttgttttaagttataattgttgattcccgagaataaaatgatagaaatgtatatgtctatg 28904254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 34930467 - 34930534
Alignment:
Q  223 gtgtgtttgtttcaa-gttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  34930467 gtgtgtttgtttcaaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatg 34930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 7833554 - 7833640
Alignment:
Q  89 tcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    |||||||||||||| ||||||| | ||||||||||||||||||| |||||||   | |||||||| |||||||| ||||||||||||    
T  7833554 tcttggaaatacaagtctttacttttttcttagcaataattacatcatttttttatgcaaacttatttattttagtactttaaccaa 7833640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 25098138 - 25098076
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcc 285  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||    
T  25098138 gtgtgtttgtttcaagttataatttttgattttcgggaataaaatgataggaatgtatatgcc 25098076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 45449009 - 45448945
Alignment:
Q  225 gtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||| |||||    
T  45449009 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtagatgtctatg 45448945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 31245262 - 31245343
Alignment:
Q  94 gaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    ||||||||| |||| || | | ||||||||||||||||||||||||||  | ||||||||||||||||| ||||| ||||||    
T  31245262 gaaatacaagtcttcacttttgtcttagcaataattacaccatttttcgatgcaaacttacttattttagtacttcaaccaa 31245343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 205
Target Start/End: Original strand, 2256419 - 2256566
Alignment:
Q  57 aatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttactt 156  Q
    |||| ||||||||| || |||| |||||| |||||| ||||| ||| | ||||  | |||||||| ||| ||||||||| |||||  | |||||||||||    
T  2256419 aatgattaaggattccattaatagaaactatgtcttagaaatgcaagtatttattt-tttcttaggaatgattacaccacttttcgatgcaaacttactt 2256517  T
Q  157 attttaatactttaaccaacactacaagggtaatggttaacattctcct 205  Q
    |||||||||||| |||||| | | |||| | |||||||| |||| ||||    
T  2256518 attttaatacttcaaccaatattccaagagcaatggttagcattatcct 2256566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 3338445 - 3338527
Alignment:
Q  50 taaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattaca 132  Q
    ||||||||||| ||||||||| || ||||  |||| |||||||| |||||||||| ||||| | | |||||||||||||||||    
T  3338445 taaggacaatgattaaggattccattaataaaaacattgtcttgaaaatacaaatttttacttttgtcttagcaataattaca 3338527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 22680820 - 22680726
Alignment:
Q  81 aaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    |||| |||||||| ||||| || ||||||  | |||||||||||| ||||||||| |||||  | ||||||||||||||| | ||||||||||||    
T  22680820 aaacattgtcttgaaaataaaagtctttatttttttcttagcaatcattacaccacttttcgatgcaaacttacttatttaagtactttaaccaa 22680726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 44820323 - 44820266
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtat 280  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||| | |||||||    
T  44820323 gtgtgtttgtttcaagttataattgttgattttcaggaataaaatgatagaaatgtat 44820266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 46302589 - 46302496
Alignment:
Q  121 gcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcctaaaaatatt 214  Q
    ||||||||| || || |||||| | |||||||||| |||||| || |||||||||    | ||||| |||||||||||||||||||||||||||    
T  46302589 gcaataattgcatcagttttcaatgcaaacttactaattttagtattttaaccaatgtcataagggcaatggttaacattctcctaaaaatatt 46302496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 11000777 - 11000725
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    |||| |||||||||||||||||||||  |||||||||| || |||||||||||    
T  11000777 ttagggtgtgtttgtttcaagttatatatgttgattcctggaaataaaatgat 11000725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 25045614 - 25045685
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| ||||||||||||||||||||| ||||||||| | ||| |||||| ||| ||||| ||||||| ||||    
T  25045614 cttagggtgtgtttgtttcaagttatatttgttgatt-ctggggataaaaagataggaatatatatgcatatg 25045685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 41684024 - 41684084
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    ||||||||||||||||||||| ||||||||||| | |||||| ||||| | ||| ||||||    
T  41684024 gtgtgtttgtttcaagttatatttgttgattcctgagaataatatgatagaaatatatatg 41684084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 45440977 - 45440933
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 267  Q
    |||||||||||||||||||||||||| |||||  |||||||||||    
T  45440977 gtgtgtttgtttcaagttataattgtagattcttgggaataaaat 45440933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 6656226 - 6656292
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||| |||||||||   || |||||||||||  |||| ||||| ||||||    
T  6656226 gtgtgtttgtttcaagttatatttgttgatttttggaaataaaatgatatgaatatatatacctatg 6656292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 31921741 - 31921813
Alignment:
Q  214 ttacttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgccta 287  Q
    ||||| || ||||||||||||||||||||| ||||| |||  ||| ||||||||||| | ||| ||||||||||    
T  31921741 ttactaagggtgtgtttgtttcaagttatatttgttcatt-tcggaaataaaatgatagaaatatatatgccta 31921813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 30685994 - 30686038
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 267  Q
    |||||||||||||||||||||||||| |||||   ||||||||||    
T  30685994 gtgtgtttgtttcaagttataattgtagattcgttggaataaaat 30686038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 37534105 - 37534149
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 267  Q
    |||||||||||||| ||||||||||| |||||| || ||||||||    
T  37534105 gtgtgtttgtttcatgttataattgtagattcctggaaataaaat 37534149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 46302950 - 46302898
Alignment:
Q  57 aatggttaaggatttcaataatggaaactttgtcttggaaatacaaatcttta 109  Q
    |||||||||||||| || |||| ||||  ||||||||||||||||| ||||||    
T  46302950 aatggttaaggattccattaatagaaatattgtcttggaaatacaagtcttta 46302898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 6e-34; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 26 - 200
Target Start/End: Complemental strand, 27982459 - 27982289
Alignment:
Q  26 tatgagtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaat 125  Q
    |||| ||||||||||| |||  ||||||| ||||| ||||||||| || |||| ||||||||||||||||||||||| ||||||| | |||||||| |||    
T  27982459 tatgggtcttgctaaccagtgccctaagggcaatgattaaggattccattaatagaaactttgtcttggaaatacaagtctttacttttttcttagtaat 27982360  T
Q  126 aattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacatt 200  Q
     ||||||||| |||||    ||||||||||||||||| ||||||||||||  |  |||||| |||||||||||||    
T  27982359 gattacaccacttttc----caaacttacttattttagtactttaaccaatgccccaagggcaatggttaacatt 27982289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 26 - 200
Target Start/End: Complemental strand, 28039761 - 28039591
Alignment:
Q  26 tatgagtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaat 125  Q
    |||| ||||||||||| |||  ||||||| ||||| ||||||||| || |||| ||||||||||||||||||||||| ||||||| | |||||||| |||    
T  28039761 tatgggtcttgctaaccagtgccctaagggcaatgattaaggattccattaatagaaactttgtcttggaaatacaagtctttacttttttcttagtaat 28039662  T
Q  126 aattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacatt 200  Q
     ||||||||| |||||    ||||||||||||||||| ||||||||||||  |  |||||| |||||||||||||    
T  28039661 gattacaccacttttc----caaacttacttattttagtactttaaccaatgccccaagggcaatggttaacatt 28039591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 35818421 - 35818492
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35818421 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 35818492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 38364155 - 38364084
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38364155 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 38364084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 205 - 289
Target Start/End: Complemental strand, 25837997 - 25837914
Alignment:
Q  205 taaaaatatttacttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  25837997 taaaaatatt-acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtacatgcctatg 25837914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 18726621 - 18726687
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18726621 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 18726687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 12710720 - 12710648
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  12710720 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 12710648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 16313499 - 16313575
Alignment:
Q  213 tttacttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  16313499 tttacttagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatacctatg 16313575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 205
Target Start/End: Original strand, 41168600 - 41168772
Alignment:
Q  34 ttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagc-aataattaca 132  Q
    |||||||| ||| | |||| || |||||||||||||| || ||||  |||| ||||||||||||||||| ||||||| | | ||||||| ||||||||||    
T  41168600 ttgctaaccagtgttctaaagataatggttaaggattccattaataaaaacattgtcttggaaatacaagtctttacttttgtcttagcaaataattaca 41168699  T
Q  133 ccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcct 205  Q
     || |||||| | ||||||||||||||||| ||||||||| || |    ||||| ||||||||||||||||||    
T  41168700 tcacttttcaatgcaaacttacttattttagtactttaactaatatcctaagggcaatggttaacattctcct 41168772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 37392543 - 37392614
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37392543 ttagggtgtatttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 37392614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 1554356 - 1554422
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  1554356 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 1554422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 3050074 - 3050012
Alignment:
Q  227 gtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3050074 gtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 3050012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 32660935 - 32661001
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  32660935 gtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatg 32661001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 26601941 - 26602006
Alignment:
Q  224 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26601941 tgtgtttgtttcaaattataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 26602006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 10896219 - 10896285
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  10896219 gtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatg 10896285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 42755936 - 42755870
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  42755936 gtgtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatg 42755870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 41228707 - 41228780
Alignment:
Q  214 ttacttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgccta 287  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  41228707 ttacatagggtgtgtttgtttcaagttataattgttaattcccgggaataaaatggtaggaatgtatatgccta 41228780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 38132734 - 38132805
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||| |||||    
T  38132734 ttagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgtctatg 38132805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 26062213 - 26062147
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||||    
T  26062213 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatattcctatg 26062147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 44167179 - 44167265
Alignment:
Q  75 taatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttatttt 161  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||||| ||||||| | |||||  | ||||||||||||||||    
T  44167179 taatagaaactttgtcttggaaatacaaatctttacttttttcttagcaatgattacacaacttttcgatgcaaacttacttatttt 44167265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 7931311 - 7931248
Alignment:
Q  220 agagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  7931311 agagagtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatg 7931248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 18298178 - 18298115
Alignment:
Q  226 tgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| ||||||    
T  18298178 tgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtatatacctatg 18298115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 12956330 - 12956217
Alignment:
Q  91 ttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaat 190  Q
    |||||||||||| ||||||  | |||||||||||| ||||||||| |||||  | |||||||||||| |||| ||||||||||||  |  |||| |||||    
T  12956330 ttggaaatacaattctttattt-tttcttagcaatgattacaccaattttcgatgcaaacttacttactttagtactttaaccaatgccccaagagtaat 12956232  T
Q  191 ggttaacattctcct 205  Q
    |||||||||||||||    
T  12956231 ggttaacattctcct 12956217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 205
Target Start/End: Complemental strand, 22488950 - 22488765
Alignment:
Q  26 tatgagtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaat 125  Q
    |||||||||||||||| |||  |||||||  |||||||||||||| || |||| |||||||||| |||||||||||| | || || | ||||||||||||    
T  22488950 tatgagtcttgctaaccagtgccctaagggtaatggttaaggattccattaatagaaactttgttttggaaatacaagttttcacttttttcttagcaat 22488851  T
Q  126 aatta------caccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcct 205  Q
    | |||      | ||| |||||  |  |||||||||||||| | ||||||||||||  |  |||||| |||||||| |||||||||    
T  22488850 agttaccccacccccacttttcgatgtaaacttacttatttaagtactttaaccaatgccccaagggcaatggttagcattctcct 22488765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 40197081 - 40197138
Alignment:
Q  226 tgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  40197081 tgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatg 40197138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 5020485 - 5020539
Alignment:
Q  216 acttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  5020485 acttagagtgtgtttgtttcaagttatatttgttgattcatgggaataaaatgat 5020539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 8635706 - 8635664
Alignment:
Q  220 agagtgtgtttgtttcaagttataattgttgattcccgggaat 262  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  8635706 agagtgtgtttgtttcaagttataattgttgattcccaggaat 8635664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 31505649 - 31505532
Alignment:
Q  57 aatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttactt 156  Q
    |||| ||||||||| |  |||| ||||  ||||||| ||||||| | ||||||| | | ||||| |||||||||||  |||||| | |||||| ||||||    
T  31505649 aatgattaaggattccgttaatagaaatattgtcttagaaataccagtctttacttttgtcttaacaataattacattatttttaa-tacaaatttactt 31505551  T
Q  157 attttaatactttaaccaa 175  Q
    |||||||||||||||||||    
T  31505550 attttaatactttaaccaa 31505532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 29374565 - 29374664
Alignment:
Q  114 tttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcctaaaaatat 213  Q
    |||||||||||||||||||||| |||||  |  ||| |||||||||||| ||||||||||||     ||||| ||||||||| ||||||| | |||||||    
T  29374565 tttcttagcaataattacaccacttttcgatgtaaatttacttattttactactttaaccaatgtctcaaggataatggttagcattctctttaaaatat 29374664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 33444628 - 33444675
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    ||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  33444628 gtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgat 33444675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 7317442 - 7317376
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||| |||||||||  |   ||||||||||| ||||| ||||||||||||    
T  7317442 gtgtgtttgtttcaagttatatttgttgattttcaaaaataaaatgataggaatatatatgcctatg 7317376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 21137134 - 21137200
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||| |||||||| ||||||||||| | ||||||||| || | ||| ||||||||||||    
T  21137134 gtgtgtttgtttgaagttatatttgttgattcctgagaataaaataatagaaatatatatgcctatg 21137200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 41086840 - 41086932
Alignment:
Q  80 gaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaac 172  Q
    ||||||||||||||||||||||||| ||||| | | |||| | ||||||||||| |  ||| | || ||| |||||||||||  |||||||||    
T  41086840 gaaactttgtcttggaaatacaaatttttacttttatcttggtaataattacacaacattttattaaaaaattacttattttggtactttaac 41086932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 3423802 - 3423745
Alignment:
Q  116 tcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaacc 173  Q
    |||||||||||||||||| | ||||   |||||| |||||||||||| ||||||||||    
T  3423802 tcttagcaataattacacaagttttagttacaaaattacttattttagtactttaacc 3423745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 25899701 - 25899657
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 267  Q
    ||||||||||||||| ||||| |||| |||||| |||||||||||    
T  25899701 gtgtgtttgtttcaaattatatttgtagattcctgggaataaaat 25899657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 31117545 - 31117577
Alignment:
Q  222 agtgtgtttgtttcaagttataattgttgattc 254  Q
    |||||||||||||||||||||| ||||||||||    
T  31117545 agtgtgtttgtttcaagttatatttgttgattc 31117577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 25 - 175
Target Start/End: Original strand, 30251917 - 30252067
Alignment:
Q  25 atatgagtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaa 124  Q
    ||||| |||||| |||| |||  ||||||| ||||||||||||||| || |||| |||| |||||||||||||||||| ||||||| | |||||||||||    
T  30251917 atatgggtcttggtaaccagtgccctaagggcaatggttaaggattccattaatagaaattttgtcttggaaatacaagtctttacttttttcttagcaa 30252016  T
Q  125 taattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    ||||||||||| |||||  ||||||  || |||||||| ||||||||||||    
T  30252017 taattacaccacttttcgatacaaatatatttattttagtactttaaccaa 30252067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 22935909 - 22935980
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22935909 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 22935980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 28602629 - 28602558
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28602629 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 28602558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 4765562 - 4765628
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4765562 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 4765628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 175
Target Start/End: Complemental strand, 10511210 - 10511097
Alignment:
Q  61 gttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattt 160  Q
    |||||||||| |||||||||||||||||  |||||||||||| |||| || | ||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  10511210 gttaaggattccaataatggaaactttgctttggaaatacaagtctt-acttttttcttagcaataattacaccatttttcaatgcaaagttactcattt 10511112  T
Q  161 taatactttaaccaa 175  Q
    || ||||||||||||    
T  10511111 tactactttaaccaa 10511097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 12970532 - 12970598
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12970532 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 12970598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 19065507 - 19065573
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19065507 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 19065573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 42641235 - 42641114
Alignment:
Q  54 gacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaactta 153  Q
    |||||| ||||||||||  | |||| |||||||||||||| |||||||| ||||||| | ||||||| |||| |||||||||||||||  | ||||||||    
T  42641235 gacaatagttaaggattctattaatagaaactttgtcttgaaaatacaagtctttacttttttcttatcaatgattacaccatttttcgatgcaaactta 42641136  T
Q  154 cttattttaatactttaaccaa 175  Q
    ||||||||| ||||||||||||    
T  42641135 cttattttagtactttaaccaa 42641114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 29543017 - 29543083
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  29543017 gtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgtctatg 29543083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 24 - 204
Target Start/End: Complemental strand, 7736451 - 7736271
Alignment:
Q  24 aatatgagtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagca 123  Q
    |||||| ||||||||||| |||  ||||||| |||||||||| |||  || |||| |||||||| ||||| |||||||| ||||||  | ||||||||||    
T  7736451 aatatgggtcttgctaaccagtgccctaagggcaatggttaaagatcccattaatagaaactttatcttgaaaatacaagtctttaattttttcttagca 7736352  T
Q  124 ataattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcc 204  Q
    || ||||| ||| |||||| |  |||||||||||||| | ||||||||||||     |||||| |||||||| ||||||||    
T  7736351 atcattacgccacttttcaatggaaacttacttatttaagtactttaaccaatgtcccaagggcaatggttagcattctcc 7736271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 6091789 - 6091718
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  6091789 ttagagcgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcctatg 6091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 555708 - 555774
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||    
T  555708 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 14206823 - 14206889
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  14206823 gtgtgtttgtttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatg 14206889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 18412278 - 18412212
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  18412278 gtgtgtttgtttcaagttataattattgattcctgggaataaaatgataggaatgtatatgcctatg 18412212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 11855658 - 11855723
Alignment:
Q  224 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  11855658 tgtgtttgtttcaagttataattgttgattcctgagaataaaatgataggaatgtatatgcctatg 11855723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 1637946 - 1638086
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    ||||||||||| |||||| ||||| |||||||||| ||||  | ||||  ||| |||||||||||||||||||| ||||| | |||||||||||||||||    
T  1637946 gtcttgctaaccagtatcttaagggcaatggttaatgattctattaatataaattttgtcttggaaatacaaatttttacttttttcttagcaataatta 1638045  T
Q  131 caccatttttcagtacaaacttacttattttaatactttaa 171  Q
    ||| | ||||   | |||||||| |||||||| | ||||||    
T  1638046 cacaactttttgatgcaaacttatttattttagttctttaa 1638086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 31112389 - 31112529
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    ||||||||||| |||  ||||||| |||||||||| |||| || |||| ||||  |||||||  ||||||||  |||||| | ||| | |  ||||||||    
T  31112389 gtcttgctaaccagtgccctaagggcaatggttaatgattccattaatagaaatattgtcttaaaaatacaaggctttacatttttttaaataataatta 31112488  T
Q  131 caccatttttcagtacaaacttacttattttaatactttaa 171  Q
    |||||| ||||| |||||||||||||||||||||| |||||    
T  31112489 caccatatttcaatacaaacttacttattttaatagtttaa 31112529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 32536013 - 32535946
Alignment:
Q  216 acttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  32536013 actttgagtgtgtttgttttaagttataattgttgattcccaggaataaaatgatagaaatgtatatg 32535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 36703943 - 36703877
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| | |||||||||| |||||    
T  36703943 gtgtgtttgtttcaagttataattgttgattatcgggaataaaatgatagaaatgtatatgtctatg 36703877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 20078349 - 20078415
Alignment:
Q  144 tacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattctcctaaaaa 210  Q
    |||||| |||||||||||| ||||||||||||  || ||||||||||||||||||||||||| ||||    
T  20078349 tacaaatttacttattttagtactttaaccaatgctccaagggtaatggttaacattctccttaaaa 20078415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 27481426 - 27481360
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||| ||||||   || ||||||||||| ||||||||||||||||||    
T  27481426 gtgtgtttgtttcaagttataatttttgatttttggaaataaaatgataggaatgtatatgcctatg 27481360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 8406959 - 8406898
Alignment:
Q  227 gtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctat 288  Q
    |||||||||||||||||||||||||||  || |||||||||||| |||||||| ||||||||    
T  8406959 gtttgtttcaagttataattgttgattttcgagaataaaatgataggaatgtacatgcctat 8406898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 8646412 - 8646459
Alignment:
Q  242 taattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  8646412 taattgttgattcccgggaataaaatgataggaatgtatatgtctatg 8646459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 25731312 - 25731217
Alignment:
Q  81 aaactttgtcttggaaatacaaatctttacctattt-cttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    ||||||||||||  |||| ||||||||||  | ||| ||||||||||||||||| | |||||  | ||||||||||||||||| ||||||||||||    
T  25731312 aaactttgtcttaaaaattcaaatctttattttttttcttagcaataattacacaacttttctatgcaaacttacttattttagtactttaaccaa 25731217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 33085403 - 33085276
Alignment:
Q  48 cctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtaca 147  Q
    ||||||| || |||||||||| | || || | |||||||||||||| ||||| |||| ||||| | | |||||||||||| ||||||| ||||   | ||    
T  33085403 cctaagggcattggttaaggaatccattagtagaaactttgtcttgaaaatataaatttttacttttgtcttagcaataactacaccacttttgtatgca 33085304  T
Q  148 aacttacttattttaatactttaaccaa 175  Q
    ||||| || ||||||| |||||||||||    
T  33085303 aacttgctaattttaacactttaaccaa 33085276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 1041925 - 1042015
Alignment:
Q  81 aaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaac 172  Q
    |||||| |||||| ||||| || | ||||| | |||||||||||| ||||||||| |||||  ||||||||||||| ||||| |||||||||    
T  1041925 aaacttagtcttgaaaatataagt-tttacttttttcttagcaattattacaccaattttcgatacaaacttactttttttagtactttaac 1042015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 42012173 - 42012228
Alignment:
Q  215 tacttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    ||||||| |||||||||||| ||| |||| |||||||||| |||||||||||||||    
T  42012173 tacttagggtgtgtttgtttgaagctatatttgttgattctcgggaataaaatgat 42012228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 4858157 - 4858077
Alignment:
Q  82 aactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaa 163  Q
    |||||||||||  ||||| |||| ||||| | | ||||||||||||||||| ||||||| | |||||||||||| |||||||    
T  4858157 aactttgtcttataaatataaatttttacttttgtcttagcaataattacatcattttt-aatacaaacttactaattttaa 4858077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 7611938 - 7612051
Alignment:
Q  62 ttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttatttt 161  Q
    ||||||| |||| |||| |||||||| ||||| ||||| |||  ||||| | | | ||||||||||||| || |||||| | | | || || ||||||||    
T  7611938 ttaaggaattcattaatagaaactttatcttgaaaataaaaaaatttacttttgttttagcaataattaaacaattttttattgcgaagttgcttatttt 7612037  T
Q  162 aatactttaaccaa 175  Q
    ||||||||||||||    
T  7612038 aatactttaaccaa 7612051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 35626731 - 35626634
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataat 128  Q
    |||||||||||||||  ||||||||||||||||||||| | || |||| |||| ||||| ||| ||||| || | ||||| | | ||||| |||||||    
T  35626731 gtcttgctaactagtgccctaaggacaatggttaaggaatccattaatagaaattttgttttgaaaatataagtttttacttttgtcttaccaataat 35626634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 1042052 - 1042140
Alignment:
Q  114 tttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattct 202  Q
    |||||||||||| ||||||||| |||||  | ||||||||||| ||||| ||||||||| ||  |  ||| || |||||||||||||||    
T  1042052 tttcttagcaattattacaccaattttcgatgcaaacttactttttttagtactttaactaatgccccaaaggcaatggttaacattct 1042140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 17317470 - 17317370
Alignment:
Q  75 taatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaacca 174  Q
    |||| ||||||||||||||||||||||||  ||||||| | |||||  |||||| |||||| ||||   | |||| ||| | ||||||| ||||||||||    
T  17317470 taatagaaactttgtcttggaaatacaaacttttacctttgtcttaataataatcacaccactttttgatgcaaatttattaattttaacactttaacca 17317371  T
Q  175 a 175  Q
    |    
T  17317370 a 17317370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 6930713 - 6930666
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    |||||||| |||||||||||| ||||||||||| | ||||||||||||    
T  6930713 gtgtgtttatttcaagttatatttgttgattcctgagaataaaatgat 6930666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 20962661 - 20962606
Alignment:
Q  221 gagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaat 276  Q
    ||||||||||||||||||||||| | || |||||  |||||||||||||| |||||    
T  20962661 gagtgtgtttgtttcaagttatattcgtagattcttgggaataaaatgataggaat 20962606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 26637045 - 26637092
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    ||||||||||||||||||||| |||||||||   ||||||||||||||    
T  26637045 gtgtgtttgtttcaagttatatttgttgattaatgggaataaaatgat 26637092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 34023294 - 34023352
Alignment:
Q  116 tcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaacca 174  Q
    ||||||||||||||| |||| |||| | |||||||||| ||||||||  ||||||||||    
T  34023294 tcttagcaataattataccactttttaatacaaacttaattattttagaactttaacca 34023352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 14156967 - 14157108
Alignment:
Q  34 ttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacac 133  Q
    |||||||| ||| |||||| |||| || |||| || | |  |||| |||| ||| ||||| |||||||||| ||||| | | ||||| |||||||||||     
T  14156967 ttgctaacaagtgtcctaaagacattgattaatgaatcctttaatagaaattttatcttgtaaatacaaatttttacttttgtcttatcaataattacat 14157066  T
Q  134 catttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    || || |   | |||||||||||||||||  |||||||||||    
T  14157067 cacttattgatgcaaacttacttattttacaactttaaccaa 14157108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 42674656 - 42674729
Alignment:
Q  216 acttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42674656 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 42674729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 59 - 205
Target Start/End: Original strand, 31915043 - 31915189
Alignment:
Q  59 tggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttat 158  Q
    |||||||||||| || |||| |||||||||||||| |||||||| ||||||| | |||| ||| ||||||||||||| |||||  | |||||||||||||    
T  31915043 tggttaaggattccattaatagaaactttgtcttgaaaatacaagtctttacttttttcatagaaataattacaccacttttcgatgcaaacttacttat 31915142  T
Q  159 tttaatactttaaccaacactacaagggtaatggttaacattctcct 205  Q
    |||||||||||||||||  |  |||||  |||||||| |||||||||    
T  31915143 tttaatactttaaccaatgccccaaggacaatggttaccattctcct 31915189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 346347 - 346413
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  346347 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 346413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 14777500 - 14777566
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14777500 gtgtgtttgtttcaatttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 14777566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 39995133 - 39995199
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39995133 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 39995199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 4559634 - 4559562
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  4559634 cttagggtgtgtttgtttcaagttataattgttgattcccaagaataaaatgattggaatgtatatgcctatg 4559562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 21737397 - 21737468
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  21737397 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 21737468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 2521744 - 2521678
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  2521744 gtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgattggaatgtatatgcctatg 2521678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 6171860 - 6171794
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  6171860 gtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatg 6171794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 9733848 - 9733914
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  9733848 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 9733914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 11071674 - 11071608
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  11071674 gtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatg 11071608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 17966059 - 17965986
Alignment:
Q  216 acttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  17966059 acttagggtgtgtttgtttcaagttataattgttgattcccgataataaaatgattggaatgtatatgtctatg 17965986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 34356696 - 34356768
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||    
T  34356696 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 34356768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 37192593 - 37192525
Alignment:
Q  221 gagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||    
T  37192593 gagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 37192525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 5770115 - 5770178
Alignment:
Q  226 tgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  5770115 tgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatg 5770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 31598007 - 31598152
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttac--ctatttcttagcaataat 128  Q
    ||||||||||  | || |||||||||||| |||||||||| || |||| ||||||||||||||||||| |||||||||||   | |||||||||||||||    
T  31598007 gtcttgctaatcaataccctaaggacaatagttaaggattccattaatagaaactttgtcttggaaattcaaatctttacttttttttcttagcaataat 31598106  T
Q  129 tacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    || ||||  ||||  | ||||||||||||||||| || |||||||||    
T  31598107 tatacca-ctttcgatgcaaacttacttattttagtattttaaccaa 31598152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 204
Target Start/End: Original strand, 38373335 - 38373478
Alignment:
Q  61 gttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattt 160  Q
    ||||| |||| || |||| |||||||| |||||||||||||| | ||||| | | ||||||||||||||||||||||||||  | |||| ||||||||||    
T  38373335 gttaatgattccattaatagaaactttatcttggaaatacaagtttttacttttatcttagcaataattacaccatttttcgatgcaaatttacttattt 38373434  T
Q  161 taatactttaaccaacactacaagggtaatggttaacattctcc 204  Q
    ||||| |||||||||  || |||| | |||||| | ||||||||    
T  38373435 taatattttaaccaatgctccaagagcaatggtaatcattctcc 38373478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 2050935 - 2050869
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  2050935 gtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatacctatg 2050869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 203
Target Start/End: Complemental strand, 12800896 - 12800755
Alignment:
Q  61 gttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattt 160  Q
    ||||| |||| || |||| |||||||||||||| ||||| |||| ||||| | ||||||| ||||||||| |||| |||||  |||||| |||||||| |    
T  12800896 gttaatgattccattaatagaaactttgtcttgaaaatataaat-tttacttttttcttaacaataattagaccaattttcgatacaaatttacttatct 12800798  T
Q  161 taatactttaaccaacactacaagggtaatggttaacattctc 203  Q
    |||||||||||||||  |  ||| |||||||||||||||||||    
T  12800797 taatactttaaccaatgcctcaaaggtaatggttaacattctc 12800755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 37534021 - 37533955
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||    
T  37534021 gtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgtctatg 37533955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 8033260 - 8033410
Alignment:
Q  49 ctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaa 148  Q
    |||| ||||||| |||||||||||| |||| |||||||| ||||| |||||||| | ||||| | ||| ||| |||||||||||||| |||||  | |||    
T  8033260 ctaaagacaatgattaaggatttcattaatagaaactttatcttgaaaatacaagt-tttactttttt-ttatcaataattacaccacttttcgatgcaa 8033357  T
Q  149 acttacttattttaatactttaaccaacactacaagggtaatggttaacattc 201  Q
    | |||||||||||||||||||||||||  |  |||||| |||||||| |||||    
T  8033358 atttacttattttaatactttaaccaatgccccaagggcaatggttagcattc 8033410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 28311701 - 28311765
Alignment:
Q  225 gtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  28311701 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaatatatatgcctatg 28311765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 20426485 - 20426551
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  20426485 gtgtgtttgtttcaaattatatttgttgattcccgggaataaaatgataggaatttatatgcctatg 20426551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 37519640 - 37519733
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaat 125  Q
    |||||||||||||||  ||||||||||||||||||||||| || ||||  |||||||||||| ||||||||| ||||||||| ||||||| ||||    
T  37519640 gtcttgctaactagtgccctaaggacaatggttaaggattccattaatataaactttgtctt-gaaatacaagtctttacctttttcttaacaat 37519733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 41729132 - 41729198
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||| |||||||||||    
T  41729132 gtgtgtttgtttcaagttataattttttattcccgggaataaaatgataggaatggatatgcctatg 41729198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 41750598 - 41750532
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||||||||||    
T  41750598 gtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatg 41750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 638660 - 638596
Alignment:
Q  225 gtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||||    
T  638660 gtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatg 638596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 174
Target Start/End: Original strand, 2396688 - 2396800
Alignment:
Q  62 ttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttatttt 161  Q
    ||||||||| || ||||  ||||||||||||||| ||| |||||||||| | ||||||  |||| ||||||||| |||| | |||||| |||||||||||    
T  2396688 ttaaggattccattaataaaaactttgtcttggagatataaatctttacttttttcttgacaatgattacaccactttttaatacaaaattacttatttt 2396787  T
Q  162 aatactttaacca 174  Q
    | |||||||||||    
T  2396788 agtactttaacca 2396800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 37233496 - 37233432
Alignment:
Q  225 gtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||||||||||||    
T  37233496 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaacatatatgcctatg 37233432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 40950856 - 40950927
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||| ||||    
T  40950856 ttagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatatatatgcttatg 40950927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 26310335 - 26310273
Alignment:
Q  226 tgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctat 288  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  26310335 tgtttgtttaaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctat 26310273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 45409319 - 45409253
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||| ||||||||||||  | |||||||||| ||||||||||||||||||    
T  45409319 gtgtgtttgtttcaagttatatttgttgattcccaagtataaaatgataggaatgtatatgcctatg 45409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 205
Target Start/End: Complemental strand, 31921354 - 31921207
Alignment:
Q  57 aatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttactt 156  Q
    ||||||||| |||  || |||| |||||||||||||| |||||||| | ||||  | |||||||||||| ||||||||| |||||    |||||||||||    
T  31921354 aatggttaatgatcccattaatagaaactttgtcttgaaaatacaagtatttattt-tttcttagcaatcattacaccacttttcgaggcaaacttactt 31921256  T
Q  157 attttaatactttaaccaacactacaagggtaatggttaacattctcct 205  Q
    |||| | ||||||||||||  |   ||||| ||||||||||||||||||    
T  31921255 atttaagtactttaaccaatgccctaagggcaatggttaacattctcct 31921207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 27357965 - 27358031
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||| || ||||||||| |||||    
T  27357965 gtgtgtttgtttcaagttatatttgttgattcccaggtataaaatgatagggatgtatatgtctatg 27358031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 14832877 - 14832813
Alignment:
Q  225 gtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||| | ||| ||||||||||||    
T  14832877 gtgtttgtttcaagttatatttgttgattcctaggaataaaatgatagaaatatatatgcctatg 14832813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 35005291 - 35005203
Alignment:
Q  104 tctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaacactacaagggtaatgg 192  Q
    ||||||| | |||||||||||| ||||||||| |||||  | ||||||||||||||||| ||||||||||||  |  ||||||||||||    
T  35005291 tctttacttttttcttagcaatgattacaccacttttcgatgcaaacttacttattttagtactttaaccaatgccccaagggtaatgg 35005203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 16209806 - 16209941
Alignment:
Q  50 taaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaa 149  Q
    ||||| ||||||||||| | | ||||| | |||||||||| |||||||||||| | ||||| | | ||||||||||| |||||| | ||||   |  |||    
T  16209806 taagggcaatggttaagaaatccaatagtagaaactttgttttggaaatacaagtgtttacttttgtcttagcaatagttacacaactttttgttttaaa 16209905  T
Q  150 cttacttattttaatactttaaccaacactacaagg 185  Q
     |||||||||||| ||||||||||||  ||||||||    
T  16209906 gttacttattttagtactttaaccaatgctacaagg 16209941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 6571756 - 6571690
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| ||||||| |||||||| ||||||||| |||| ||||||||||| ||||| ||||||||||||    
T  6571756 gtgtatttgtttaaagttatatttgttgatttccggaaataaaatgataggaatatatatgcctatg 6571690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 13761013 - 13760948
Alignment:
Q  224 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||| ||||| ||| | ||||||    
T  13761013 tgtgtttgtttcaagttataattattgattttcgggaataaaatgataggaatatatgtacctatg 13760948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 40570089 - 40570045
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 267  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  40570089 gtgtgtttgtttcaagttataattgtagattcctgggaataaaat 40570045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 1988380 - 1988314
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||| |||||||| ||||||||| | |||||||||||||| | ||| || |||||||||    
T  1988380 gtgtgtttgtttgaagttatatttgttgatttctgggaataaaatgatagaaatatacatgcctatg 1988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 168806 - 168718
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttctta 120  Q
    ||||||||||| |||  ||||||| ||||| ||||||||| || |||| |||| ||| |||| ||||||||||||||||| | |||||||    
T  168806 gtcttgctaacaagtgccctaagggcaatg-ttaaggattccattaatagaaattttatcttagaaatacaaatctttacttttttctta 168718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 18713660 - 18713725
Alignment:
Q  224 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||| ||||||||||  || |||||||||||   ||| ||||||||||||    
T  18713660 tgtgtttgtttcaagttatatttgttgattcatggtaataaaatgatataaatatatatgcctatg 18713725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 14845960 - 14846023
Alignment:
Q  147 aaacttacttattttaatactttaaccaa-cactacaagggtaatggttaacattctcctaaaaa 210  Q
    |||||||||||||||||||||||||||||  ||| |||||| |||||||| ||||||||| ||||    
T  14845960 aaacttacttattttaatactttaaccaatgact-caagggcaatggttagcattctccttaaaa 14846023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 29140315 - 29140171
Alignment:
Q  34 ttgctaactagtatcctaaggacaatggttaaggatt-tcaataa-tggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattac 131  Q
    |||||||||||| ||||   ||||||||||||||| | || |||| | |||| |||||| || |||||||| | ||||  | || |||||||||||||||    
T  29140315 ttgctaactagtgtcctggagacaatggttaaggaatatccataaatagaaattttgtcctgaaaatacaagtttttattttttccttagcaataattac 29140216  T
Q  132 accatttttcagta-caaacttacttattttaatactttaaccaa 175  Q
    || ||||||  ||  |||| |||||||||||| ||||||||||||    
T  29140215 acaatttttttgtttcaaaattacttattttagtactttaaccaa 29140171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 31645530 - 31645430
Alignment:
Q  75 taatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaacca 174  Q
    |||| |||| |||||||| |||||| |||| ||||  | | ||||| ||||||||||||||||||| | |||||| ||| | | ||||| ||||||||||    
T  31645530 taatcgaaattttgtcttagaaatataaatttttaattttgtcttatcaataattacaccattttttaatacaaatttattaaatttaacactttaacca 31645431  T
Q  175 a 175  Q
    |    
T  31645430 a 31645430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 18967743 - 18967816
Alignment:
Q  101 aaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    |||||||||| | ||||||| |||||||||||| | |||||  | ||||||||| |||||||||| |||||||||    
T  18967743 aaatctttactt-tttcttaacaataattacacaacttttcgttgcaaacttacgtattttaatattttaaccaa 18967816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 14253578 - 14253525
Alignment:
Q  236 aagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||| |||||||||| ||||||||||||||| | ||| |||||| |||||    
T  14253578 aagttatatttgttgattctcgggaataaaatgatagaaatatatatgtctatg 14253525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 24499515 - 24499462
Alignment:
Q  217 cttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    |||| |||||||||||||||||||||| ||||||||||   | |||||||||||    
T  24499515 cttaaagtgtgtttgtttcaagttatatttgttgattcatagaaataaaatgat 24499462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 7007647 - 7007595
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgat 270  Q
    |||| |||||||| |||||||||||| ||||||||||  ||| ||||||||||    
T  7007647 ttagggtgtgtttatttcaagttatatttgttgattcttggggataaaatgat 7007595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 8793952 - 8793884
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaata 99  Q
    ||||||||||| |||  ||||||| || |||||||||| |  | |||| ||||||||||||||||||||    
T  8793952 gtcttgctaaccagtgccctaagggcattggttaaggaatctactaatagaaactttgtcttggaaata 8793884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 25455093 - 25455049
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 267  Q
    ||||||||||||||||||||| |||| |||||| | |||||||||    
T  25455093 gtgtgtttgtttcaagttatatttgtagattcctgagaataaaat 25455049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 37519772 - 37519831
Alignment:
Q  151 ttacttattttaatactttaaccaa-cactacaagggtaatggttaacattctcctaaaaa 210  Q
    |||||||||||||||||||||||||  ||| |||||| |||||||| ||||||||| ||||    
T  37519772 ttacttattttaatactttaaccaatgact-caagggcaatggttagcattctccttaaaa 37519831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 1317087 - 1317021
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1317087 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 1317021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 7053572 - 7053638
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7053572 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 7053638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 29694448 - 29694304
Alignment:
Q  31 gtcttgctaactagtatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataatta 130  Q
    ||||||||||||||| || |||||||||||||||||||||  | |||| ||||  || |||||||||||||| | ||||  | | ||||| |||||||||    
T  29694448 gtcttgctaactagtgtcttaaggacaatggttaaggattctattaatagaaatattatcttggaaatacaagtttttatttttgtcttaacaataatta 29694349  T
Q  131 caccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    || || |||||| | ||||||||||||||||| ||||||||||||    
T  29694348 catcacttttcaatgcaaacttacttattttagtactttaaccaa 29694304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 2657769 - 2657703
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  2657769 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatacctatg 2657703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 8029402 - 8029336
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  8029402 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 8029336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 14171087 - 14171016
Alignment:
Q  218 ttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  14171087 ttagggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatctatatgcctatg 14171016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 18897989 - 18897924
Alignment:
Q  224 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| | ||||||||||||||||    
T  18897989 tgtgtttgtttcaagttataattgttgattcccggaaataaagtgatagaaatgtatatgcctatg 18897924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 1407311 - 1407465
Alignment:
Q  45 tatcctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagt 144  Q
    |||||||||| |||||||||| ||||||| || | ||||||  |||||  |||||||  ||||||  | |||||||| |||||||||| || |||||  |    
T  1407311 tatcctaagggcaatggttaatgatttcattattagaaact--gtcttaaaaatacatgtctttattt-tttcttagtaataattacatcacttttcgat 1407407  T
Q  145 acaaacttacttattttaatactttaaccaacactacaagggtaatggttaacattct 202  Q
     ||||||||||||||||| |||||||| | | ||||||||   |||||||||||||||    
T  1407408 gcaaacttacttattttagtactttaatcgatactacaagaacaatggttaacattct 1407465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 16968989 - 16968928
Alignment:
Q  228 tttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||| |||||| |||||    
T  16968989 tttgtttcaagttataattgttgattcctgagaataaaatgataggaatctatatgtctatg 16968928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 7344085 - 7344150
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctat 288  Q
    ||||||| ||||||| ||||||||||  ||| ||| |||||||||||| |||||||||||||||||    
T  7344085 gtgtgttcgtttcaaattataattgtaaatttccgagaataaaatgataggaatgtatatgcctat 7344150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 175
Target Start/End: Original strand, 23131461 - 23131556
Alignment:
Q  80 gaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    |||||||||||||| ||||| |||| ||||| | | | |||||||||||||| | | |||| | | |||| |||||||||||| ||||||||||||    
T  23131461 gaaactttgtcttgaaaatataaatttttacttttgttttagcaataattacgcaactttttattgcaaaattacttattttagtactttaaccaa 23131556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 27673667 - 27673793
Alignment:
Q  48 cctaaggacaatggttaaggatttcaataatggaaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtaca 147  Q
    ||||||| ||||| |||| |||| || || | ||||  ||||||||||||||||| ||||||  | || |||||||||||||| |||| | |||  || |    
T  27673667 cctaagggcaatgattaaagattccattactagaaatgttgtcttggaaatacaagtctttattttttgcttagcaataatta-accactcttcgatata 27673765  T
Q  148 aacttacttattttaatactttaaccaa 175  Q
    ||||||||||||||| || |||||||||    
T  27673766 aacttacttattttactaatttaaccaa 27673793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 6705759 - 6705833
Alignment:
Q  215 tacttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||| ||||||||||||||||||||| ||||||||||   ||||||||||| | | ||| |||||| |||||    
T  6705759 tacttagggtgtgtttgtttcaagttatatttgttgattcattggaataaaatggtagaaatatatatgtctatg 6705833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 257
Target Start/End: Original strand, 10246224 - 10246258
Alignment:
Q  223 gtgtgtttgtttcaagttataattgttgattcccg 257  Q
    |||||||||||||||||||||||||||||||||||    
T  10246224 gtgtgtttgtttcaagttataattgttgattcccg 10246258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 6454620 - 6454545
Alignment:
Q  99 acaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaaccaa 175  Q
    |||||||||||||| ||||||| |||||||||||| | |||  | | ||||||||||||||||| || |||||||||    
T  6454620 acaaatctttacctttttcttaacaataattacacaactttcga-tgcaaacttacttattttagtattttaaccaa 6454545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 7592781 - 7592729
Alignment:
Q  119 tagcaataattacaccatttttcagtacaaacttacttattttaatactttaa 171  Q
    |||||||||||||| || |||| | |  |||||||||||||||||||||||||    
T  7592781 tagcaataattacatcactttttaatttaaacttacttattttaatactttaa 7592729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 202001 - 201928
Alignment:
Q  216 acttagagtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  202001 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 201928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 143678 - 143622
Alignment:
Q  227 gtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 283  Q
    ||||||||||||||| | ||||||||||| | |||||||||||| | ||| ||||||    
T  143678 gtttgtttcaagttaaatttgttgattcctgagaataaaatgatagaaatatatatg 143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 28957 - 29020
Alignment:
Q  226 tgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 289  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  28957 tgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtatatgcctatg 29020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 246537 - 246624
Alignment:
Q  85 tttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactttaac 172  Q
    ||||||||| |||||||| | ||||| | ||||| |||||||||||||||| |||||  | ||||||||||||||||| |||||||||    
T  246537 tttgtcttgaaaatacaagtttttacttttttctgagcaataattacaccacttttcgatgcaaacttacttattttagtactttaac 246624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 83557 - 83644
Alignment:
Q  81 aaactttgtcttggaaatacaaatctttacctatttcttagcaataattacaccatttttcagtacaaacttacttattttaatactt 168  Q
    |||||||||||| |||||| |||| ||||| | | ||||| |||||||||||| | |||| | | |||||||||| ||||||||||||    
T  83557 aaactttgtcttcgaaatataaatttttacttttgtcttatcaataattacactactttttaatgcaaacttactaattttaatactt 83644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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