View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19878_high_98 (Length: 262)
Name: NF19878_high_98
Description: NF19878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19878_high_98 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 5395792 - 5396025
Alignment:
| Q |
11 |
cagagacaatgacttcttcttcttcctcaaagaacaaatcctctgtcttcctaaacacaccatgtgccaccacaaccacagtggcaacactaaccgcaac |
110 |
Q |
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| T |
5395792 |
cagaaacaatgacttcttcttcttcctcaaagaacaaatcctctgtcttcctaaacacaccatgtgccaccacaaccacagtggcaacactaaccgcaac |
5395891 |
T |
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| Q |
111 |
aacaatattaacagtagcttgcgtaagaagcaacaaagccaccgtaacaaacgccatgagaacaaccacaattcgatcatcaacaagccgaccccataaa |
210 |
Q |
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| T |
5395892 |
aacaatattaacagtagcttgcgtaagaagcaacaaagccaccgtaacaaacgccatgagaacaaccacaattcgatcatcaacaagccgaccccataaa |
5395991 |
T |
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| Q |
211 |
atcaccggctgatcacggaggaagtagaagaaca |
244 |
Q |
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| T |
5395992 |
atcaccggctgatcacggaggaagtagaagaaca |
5396025 |
T |
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