View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19878_low_108 (Length: 250)

Name: NF19878_low_108
Description: NF19878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19878_low_108
NF19878_low_108
[»] chr2 (22 HSPs)
chr2 (18-244)||(7661425-7661650)
chr2 (18-61)||(35429629-35429672)
chr2 (18-62)||(41492832-41492876)
chr2 (17-61)||(43214356-43214400)
chr2 (18-61)||(20919610-20919653)
chr2 (18-56)||(3596255-3596293)
chr2 (19-61)||(19958099-19958141)
chr2 (17-59)||(41939128-41939170)
chr2 (25-62)||(8742858-8742895)
chr2 (25-61)||(3446730-3446766)
chr2 (25-61)||(4183176-4183212)
chr2 (25-61)||(8250335-8250371)
chr2 (25-61)||(18694785-18694821)
chr2 (25-61)||(19281608-19281644)
chr2 (25-61)||(19684073-19684109)
chr2 (25-61)||(22653678-22653714)
chr2 (25-61)||(25857329-25857365)
chr2 (25-61)||(27297175-27297211)
chr2 (25-61)||(33228967-33229003)
chr2 (25-61)||(34613979-34614015)
chr2 (25-61)||(38400310-38400346)
chr2 (25-61)||(44948596-44948632)
[»] chr1 (44 HSPs)
chr1 (18-63)||(24874969-24875014)
chr1 (25-61)||(2754360-2754396)
chr1 (25-60)||(16182199-16182234)
chr1 (25-60)||(18534002-18534037)
chr1 (18-61)||(36666603-36666646)
chr1 (26-60)||(30360413-30360447)
chr1 (25-62)||(9866218-9866255)
chr1 (18-59)||(18607836-18607877)
chr1 (17-62)||(24084027-24084072)
chr1 (18-63)||(24874136-24874181)
chr1 (18-59)||(29204647-29204688)
chr1 (18-55)||(33843222-33843259)
chr1 (18-55)||(33950720-33950757)
chr1 (25-58)||(35121083-35121116)
chr1 (25-61)||(1151759-1151795)
chr1 (25-61)||(1570226-1570262)
chr1 (25-61)||(2352599-2352635)
chr1 (25-61)||(3269619-3269655)
chr1 (25-61)||(4482632-4482668)
chr1 (25-61)||(6438098-6438134)
chr1 (25-61)||(6702576-6702612)
chr1 (25-61)||(7166261-7166297)
chr1 (25-61)||(8865854-8865890)
chr1 (25-61)||(10664828-10664864)
chr1 (25-61)||(15819635-15819671)
chr1 (25-61)||(16343028-16343064)
chr1 (25-61)||(21265656-21265692)
chr1 (25-61)||(22563386-22563422)
chr1 (25-61)||(23545488-23545524)
chr1 (25-61)||(25999850-25999886)
chr1 (25-61)||(26584780-26584816)
chr1 (18-62)||(31401272-31401316)
chr1 (25-61)||(32594251-32594287)
chr1 (25-61)||(33207205-33207241)
chr1 (25-61)||(33254728-33254764)
chr1 (25-61)||(33274900-33274936)
chr1 (25-61)||(35605657-35605693)
chr1 (25-61)||(40519578-40519614)
chr1 (28-60)||(41709960-41709992)
chr1 (25-61)||(42054333-42054369)
chr1 (25-61)||(42490444-42490480)
chr1 (23-59)||(44068855-44068891)
chr1 (25-61)||(46965740-46965776)
chr1 (25-61)||(50899544-50899580)
[»] chr4 (48 HSPs)
chr4 (17-61)||(42002306-42002350)
chr4 (25-62)||(3815059-3815096)
chr4 (17-58)||(55260339-55260380)
chr4 (25-61)||(25235831-25235867)
chr4 (25-61)||(55238533-55238569)
chr4 (25-61)||(55853142-55853178)
chr4 (26-61)||(7686297-7686332)
chr4 (18-57)||(21863912-21863951)
chr4 (18-57)||(21919773-21919812)
chr4 (18-61)||(45849047-45849090)
chr4 (25-55)||(481579-481609)
chr4 (18-60)||(3784913-3784955)
chr4 (18-60)||(42044073-42044115)
chr4 (25-59)||(47230939-47230973)
chr4 (19-60)||(2609421-2609462)
chr4 (18-59)||(16054558-16054599)
chr4 (25-62)||(22230468-22230505)
chr4 (25-62)||(22788708-22788745)
chr4 (25-62)||(40994137-40994174)
chr4 (17-58)||(42081738-42081779)
chr4 (25-58)||(42395230-42395263)
chr4 (25-62)||(43978007-43978044)
chr4 (25-61)||(3847681-3847717)
chr4 (25-61)||(6371114-6371150)
chr4 (25-61)||(8433657-8433693)
chr4 (25-61)||(8965094-8965130)
chr4 (25-61)||(10402441-10402477)
chr4 (25-61)||(17872087-17872123)
chr4 (25-61)||(23705187-23705223)
chr4 (25-61)||(24680120-24680156)
chr4 (26-62)||(24997469-24997505)
chr4 (25-61)||(26868349-26868385)
chr4 (25-61)||(26919502-26919538)
chr4 (18-58)||(29257015-29257055)
chr4 (25-61)||(35219534-35219570)
chr4 (25-61)||(37935861-37935897)
chr4 (25-61)||(39023175-39023211)
chr4 (25-61)||(40051622-40051658)
chr4 (25-61)||(43147418-43147454)
chr4 (25-61)||(43207669-43207705)
chr4 (25-61)||(43596895-43596931)
chr4 (18-62)||(45139908-45139952)
chr4 (25-61)||(46105535-46105571)
chr4 (25-61)||(46775064-46775100)
chr4 (25-61)||(48569210-48569246)
chr4 (25-61)||(49901482-49901518)
chr4 (18-62)||(50279067-50279111)
chr4 (25-61)||(55251385-55251421)
[»] chr3 (44 HSPs)
chr3 (25-61)||(44685202-44685238)
chr3 (25-61)||(50536866-50536902)
chr3 (18-61)||(14795111-14795154)
chr3 (25-60)||(54769864-54769899)
chr3 (18-60)||(20887796-20887838)
chr3 (18-60)||(55383915-55383957)
chr3 (17-50)||(2077642-2077675)
chr3 (25-62)||(4138999-4139036)
chr3 (25-62)||(5326070-5326107)
chr3 (25-62)||(9176620-9176657)
chr3 (29-62)||(24430145-24430178)
chr3 (25-62)||(34757528-34757565)
chr3 (18-59)||(44764724-44764765)
chr3 (25-62)||(47098731-47098768)
chr3 (25-62)||(48546172-48546209)
chr3 (25-61)||(882389-882425)
chr3 (25-61)||(2522926-2522962)
chr3 (25-61)||(6919997-6920033)
chr3 (25-61)||(7269955-7269991)
chr3 (25-61)||(7920320-7920356)
chr3 (25-61)||(17608353-17608389)
chr3 (25-61)||(19550506-19550542)
chr3 (25-61)||(19999867-19999903)
chr3 (25-61)||(22472348-22472384)
chr3 (25-61)||(22501965-22502001)
chr3 (25-61)||(28550353-28550389)
chr3 (25-61)||(30555261-30555297)
chr3 (25-61)||(31327535-31327571)
chr3 (25-61)||(31327752-31327788)
chr3 (25-61)||(32144584-32144620)
chr3 (18-58)||(32776214-32776254)
chr3 (25-61)||(37800645-37800681)
chr3 (25-61)||(39966108-39966144)
chr3 (25-61)||(40192156-40192192)
chr3 (25-61)||(40548303-40548339)
chr3 (25-61)||(40933865-40933901)
chr3 (25-61)||(44652016-44652052)
chr3 (25-61)||(45701344-45701380)
chr3 (25-61)||(50496848-50496884)
chr3 (26-62)||(52046420-52046456)
chr3 (25-61)||(52410275-52410311)
chr3 (25-61)||(52945895-52945931)
chr3 (25-61)||(53163594-53163630)
chr3 (25-61)||(53347324-53347360)
[»] chr8 (34 HSPs)
chr8 (18-60)||(36358968-36359010)
chr8 (18-59)||(22437817-22437858)
chr8 (18-58)||(25890431-25890471)
chr8 (19-63)||(39974839-39974883)
chr8 (18-61)||(481011-481054)
chr8 (26-61)||(5326205-5326240)
chr8 (26-61)||(39587547-39587582)
chr8 (25-59)||(10200715-10200749)
chr8 (18-60)||(14342531-14342573)
chr8 (25-63)||(34158691-34158729)
chr8 (25-61)||(12259-12295)
chr8 (25-61)||(94545-94581)
chr8 (25-61)||(1937310-1937346)
chr8 (25-61)||(8265268-8265304)
chr8 (25-61)||(10736908-10736944)
chr8 (25-61)||(11875886-11875922)
chr8 (25-61)||(11890893-11890929)
chr8 (25-61)||(16449125-16449161)
chr8 (25-61)||(17027914-17027950)
chr8 (25-61)||(17558350-17558386)
chr8 (25-61)||(17698522-17698558)
chr8 (25-61)||(23178925-23178961)
chr8 (25-61)||(26022247-26022283)
chr8 (25-61)||(28909465-28909501)
chr8 (25-61)||(29716860-29716896)
chr8 (25-61)||(30972851-30972887)
chr8 (25-61)||(32719641-32719677)
chr8 (25-61)||(34413062-34413098)
chr8 (25-61)||(35939487-35939523)
chr8 (25-61)||(38745313-38745349)
chr8 (25-61)||(39362265-39362301)
chr8 (25-61)||(41689882-41689918)
chr8 (25-61)||(43656036-43656072)
chr8 (25-61)||(44340379-44340415)
[»] chr7 (25 HSPs)
chr7 (25-58)||(13730131-13730164)
chr7 (18-61)||(23274841-23274884)
chr7 (17-58)||(4611242-4611283)
chr7 (18-59)||(7876001-7876042)
chr7 (25-62)||(24781029-24781066)
chr7 (25-62)||(27510291-27510328)
chr7 (25-61)||(2228975-2229011)
chr7 (25-61)||(2681096-2681132)
chr7 (25-61)||(9877301-9877337)
chr7 (25-61)||(10244923-10244959)
chr7 (25-61)||(12640623-12640659)
chr7 (25-61)||(15238889-15238925)
chr7 (25-61)||(19753002-19753038)
chr7 (25-61)||(23102592-23102628)
chr7 (25-61)||(25833555-25833591)
chr7 (25-61)||(29617405-29617441)
chr7 (25-61)||(30940771-30940807)
chr7 (25-61)||(35950128-35950164)
chr7 (25-61)||(36391938-36391974)
chr7 (25-61)||(37300133-37300169)
chr7 (18-58)||(38151347-38151387)
chr7 (25-61)||(42443689-42443725)
chr7 (25-61)||(44616602-44616638)
chr7 (25-61)||(47641045-47641081)
chr7 (25-61)||(47999780-47999816)
[»] scaffold0288 (1 HSPs)
scaffold0288 (25-61)||(21264-21300)
[»] chr6 (21 HSPs)
chr6 (25-61)||(4661096-4661132)
chr6 (18-60)||(23610346-23610388)
chr6 (25-62)||(8439674-8439711)
chr6 (25-61)||(607187-607223)
chr6 (25-61)||(2251838-2251874)
chr6 (25-61)||(3794207-3794243)
chr6 (25-61)||(4408358-4408394)
chr6 (25-61)||(7207844-7207880)
chr6 (25-61)||(7545329-7545365)
chr6 (25-61)||(7865389-7865425)
chr6 (25-61)||(9246416-9246452)
chr6 (25-61)||(9372235-9372271)
chr6 (25-61)||(9435626-9435662)
chr6 (25-61)||(10934599-10934635)
chr6 (25-61)||(15091448-15091484)
chr6 (18-62)||(15963970-15964014)
chr6 (25-61)||(17441873-17441909)
chr6 (25-61)||(17454779-17454815)
chr6 (25-61)||(19953862-19953898)
chr6 (25-61)||(30885604-30885640)
chr6 (25-61)||(33573817-33573853)
[»] chr5 (34 HSPs)
chr5 (25-61)||(2328592-2328628)
chr5 (18-58)||(18928723-18928763)
chr5 (25-61)||(39919127-39919163)
chr5 (18-53)||(20145591-20145626)
chr5 (26-65)||(30819226-30819265)
chr5 (25-60)||(42885830-42885865)
chr5 (19-61)||(18049649-18049691)
chr5 (18-59)||(20501397-20501438)
chr5 (25-62)||(35515511-35515548)
chr5 (25-61)||(1269201-1269237)
chr5 (25-61)||(1743127-1743163)
chr5 (25-61)||(4417719-4417755)
chr5 (25-61)||(4745910-4745946)
chr5 (25-61)||(6518810-6518846)
chr5 (25-61)||(9125663-9125699)
chr5 (25-61)||(9688706-9688742)
chr5 (25-61)||(9835033-9835069)
chr5 (25-61)||(11897248-11897284)
chr5 (25-61)||(12463756-12463792)
chr5 (25-61)||(12891557-12891593)
chr5 (25-61)||(16603398-16603434)
chr5 (29-61)||(16971622-16971654)
chr5 (25-61)||(17545206-17545242)
chr5 (18-62)||(19985499-19985543)
chr5 (25-61)||(21918052-21918088)
chr5 (26-62)||(23292452-23292488)
chr5 (25-61)||(25472617-25472653)
chr5 (25-61)||(25648119-25648155)
chr5 (25-61)||(27765257-27765293)
chr5 (25-61)||(32505688-32505724)
chr5 (18-58)||(32550179-32550219)
chr5 (18-58)||(41083564-41083604)
chr5 (25-61)||(41179837-41179873)
chr5 (25-61)||(42320317-42320353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (18-61)||(8852-8895)
[»] scaffold0250 (1 HSPs)
scaffold0250 (18-60)||(15006-15048)
[»] scaffold0366 (1 HSPs)
scaffold0366 (25-62)||(894-931)
[»] scaffold0014 (1 HSPs)
scaffold0014 (25-62)||(12295-12332)
[»] scaffold0707 (1 HSPs)
scaffold0707 (25-61)||(54-90)
[»] scaffold0608 (1 HSPs)
scaffold0608 (25-61)||(8966-9002)
[»] scaffold0445 (1 HSPs)
scaffold0445 (25-61)||(4048-4084)
[»] scaffold0128 (1 HSPs)
scaffold0128 (25-61)||(17620-17656)
[»] scaffold0121 (1 HSPs)
scaffold0121 (25-61)||(46526-46562)
[»] scaffold0100 (1 HSPs)
scaffold0100 (25-61)||(45884-45920)
[»] scaffold0088 (1 HSPs)
scaffold0088 (25-61)||(10860-10896)
[»] scaffold0024 (1 HSPs)
scaffold0024 (25-61)||(59783-59819)
[»] scaffold0009 (1 HSPs)
scaffold0009 (25-61)||(266731-266767)


Alignment Details
Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 7661425 - 7661650
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgggactggtgacaacatttttagtgcaaagttaaccaagtagttgatagtcttatcaaa 117  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  7661425 cataaattatgcaatgtctctatcaagtgagctaagctcacgggactgctgacaacatttttagtgcaaagctaaccaagtagttgatagtgttatcaaa 7661524  T
Q  118 tatgatcttagttaacttgttcctttaaaaatagtatttatttaatttggttttggatttctcatctctactcgtatagaggaataaacttgtatttcat 217  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7661525 tatgatcttagttaacttgttcctttaaaaa-agtatttatttaatttggttttggatttctcatctctactcgtatagaggaataaacttgtatttcat 7661623  T
Q  218 tccgtaaaattttctaatattcttcga 244  Q
    ||||||||||||| |||| | ||||||    
T  7661624 tccgtaaaattttttaatttgcttcga 7661650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 35429629 - 35429672
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||| |||||||||||| |||||||||||||||    
T  35429629 cataaattatgcaatgtctctaccaactgagctaagctcacggg 35429672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 41492832 - 41492876
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||    
T  41492832 cataaattatgcaatgtctctaccaactgagctaagcttacggga 41492876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 43214400 - 43214356
Alignment:
Q  17 acataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||    
T  43214400 acataaattatgcaatatccctaccaactgagttaagctcacggg 43214356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 20919653 - 20919610
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||| || ||||||||| |||||||||||||||    
T  20919653 cataaattatgcaatgtccctaccaactgagctaagctcacggg 20919610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 3596293 - 3596255
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctc 56  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  3596293 cataaattatgcaatgtctctgccaactaagctaagctc 3596255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 19958141 - 19958099
Alignment:
Q  19 ataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    |||||||||||||| || ||||||||| |||||||||||||||    
T  19958141 ataaattatgcaatgtccctaccaactgagctaagctcacggg 19958099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 41939128 - 41939170
Alignment:
Q  17 acataaattatgcaatatctctaccaactaagctaagctcacg 59  Q
    ||||| |||||||| |||| |||||||||||||||||||||||    
T  41939128 acatatattatgcattatccctaccaactaagctaagctcacg 41939170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 8742858 - 8742895
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  8742858 tatgtaatatctctaccaactgagctaagctcacggga 8742895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 3446766 - 3446730
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  3446766 tatgcaatatccctaccaactgagctaagctcacggg 3446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 4183212 - 4183176
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  4183212 tatgcaatatccctaccaactgagctaagctcacggg 4183176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 8250335 - 8250371
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  8250335 tatgcaatatccctaccaactgagctaagctcacggg 8250371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 18694821 - 18694785
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  18694821 tatgcaatatccctaccaactgagctaagctcacggg 18694785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 19281644 - 19281608
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  19281644 tatgcaatatccctaccaactgagctaagctcacggg 19281608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 19684109 - 19684073
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  19684109 tatgcaatatccctaccaactgagctaagctcacggg 19684073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 22653678 - 22653714
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  22653678 tatgcaatatccctaccaactgagctaagctcacggg 22653714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 25857329 - 25857365
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  25857329 tatgcaatatccctaccaactgagctaagctcacggg 25857365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 27297211 - 27297175
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  27297211 tatgcaatatccctaccaactgagctaagctcacggg 27297175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 33228967 - 33229003
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  33228967 tatgcaatatccctaccaactgagctaagctcacggg 33229003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 34614015 - 34613979
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  34614015 tatgcaatatccctaccaactgagctaagctcacggg 34613979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 38400346 - 38400310
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  38400346 tatgcaatatccctaccaactgagctaagctcacggg 38400310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 44948632 - 44948596
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  44948632 tatgcaatatccctaccaactgagctaagctcacggg 44948596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 24875014 - 24874969
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgggac 63  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  24875014 cataaattatgcaatatccctaccaactgagctaagctcacgggac 24874969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 2754396 - 2754360
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| |||||||||||||||||||||||||    
T  2754396 tatgcaatatccctaccaactaagctaagctcacggg 2754360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 16182234 - 16182199
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||||||||||||| ||||||||||||||    
T  16182234 tatgcaatatctctaccaactcagctaagctcacgg 16182199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 18534037 - 18534002
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||||||||||||| ||||||||||||||    
T  18534037 tatgcaatatctctaccaactgagctaagctcacgg 18534002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 36666603 - 36666646
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||| || ||||||||| |||||||||||||||    
T  36666603 cataaattatgcaatgtccctaccaactgagctaagctcacggg 36666646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 30360447 - 30360413
Alignment:
Q  26 atgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||||||||||||||||||| |||||||    
T  30360447 atgcaatatctctaccaactaagctaaactcacgg 30360413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 9866218 - 9866255
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  9866218 tatgcaatatccctaccaactgagctaagctcacggga 9866255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 18607836 - 18607877
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacg 59  Q
    ||||||||||||||| || ||||||||| |||||||||||||    
T  18607836 cataaattatgcaatgtccctaccaactcagctaagctcacg 18607877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 24084027 - 24084072
Alignment:
Q  17 acataaattatgcaatatctctaccaactaagctaagctcacggga 62  Q
    |||||||||||||||| ||| |  ||||||||||||||||||||||    
T  24084027 acataaattatgcaatgtctatgtcaactaagctaagctcacggga 24084072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 24874181 - 24874136
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgggac 63  Q
    ||||||||||||||| || ||| ||||| |||||||||||||||||    
T  24874181 cataaattatgcaatgtccctatcaactgagctaagctcacgggac 24874136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 29204688 - 29204647
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacg 59  Q
    ||||||||||||||| || ||||||||| |||||||||||||    
T  29204688 cataaattatgcaatgtccctaccaactgagctaagctcacg 29204647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 33843222 - 33843259
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagct 55  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  33843222 cataaattatgcaatatctctatcaactgagctaagct 33843259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 33950757 - 33950720
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagct 55  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  33950757 cataaattatgcaatatctctatcaactgagctaagct 33950720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 35121083 - 35121116
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcac 58  Q
    ||||||||||| ||||||||||||||||||||||    
T  35121083 tatgcaatatcgctaccaactaagctaagctcac 35121116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 1151795 - 1151759
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  1151795 tatgcaatatccctaccaactgagctaagctcacggg 1151759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 1570226 - 1570262
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  1570226 tatgcaatatccctaccaactgagctaagctcacggg 1570262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 2352599 - 2352635
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  2352599 tatgcaatatctctatcaactgagctaagctcacggg 2352635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 3269655 - 3269619
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  3269655 tatgcaatatccctaccaactgagctaagctcacggg 3269619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 4482632 - 4482668
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  4482632 tatgcaatatccctaccaactgagctaagctcacggg 4482668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 6438098 - 6438134
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  6438098 tatgcaatatccctaccaactgagctaagctcacggg 6438134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 6702612 - 6702576
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  6702612 tatgcaatatccctaccaactgagctaagctcacggg 6702576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 7166261 - 7166297
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  7166261 tatgcaatatccctaccaactgagctaagctcacggg 7166297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 8865890 - 8865854
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  8865890 tatgcaatatccctaccaactgagctaagctcacggg 8865854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 10664828 - 10664864
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10664828 tatgcaatatccctaccaactgagctaagctcacggg 10664864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 15819635 - 15819671
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  15819635 tatgcaatatccctaccaactgagctaagctcacggg 15819671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 16343064 - 16343028
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  16343064 tatgcaatatccctaccaactgagctaagctcacggg 16343028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 21265692 - 21265656
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  21265692 tatgcaatatccctaccaactgagctaagctcacggg 21265656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 22563422 - 22563386
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  22563422 tatgcaatatccctaccaactgagctaagctcacggg 22563386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 23545488 - 23545524
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  23545488 tatgcaatatccctaccaactaagcttagctcacggg 23545524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 25999886 - 25999850
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  25999886 tatgcaatatccctaccaactgagctaagctcacggg 25999850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 26584780 - 26584816
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  26584780 tatgcaatatccctaccaactgagctaagctcacggg 26584816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 31401272 - 31401316
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||||||| || ||| ||||| ||||||||||||||||    
T  31401272 cataaattatgcaatgtccctatcaactgagctaagctcacggga 31401316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 32594287 - 32594251
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  32594287 tatgcaatatccctaccaactgagctaagctcacggg 32594251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 33207241 - 33207205
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  33207241 tatgcaatatccctaccaactgagctaagctcacggg 33207205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 33254764 - 33254728
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  33254764 tatgcaatatccctaccaactgagctaagctcacggg 33254728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 33274936 - 33274900
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  33274936 tatgcaatatccctaccaactgagctaagctcacggg 33274900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 35605657 - 35605693
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  35605657 tatgcaatatccctaccaactgagctaagctcacggg 35605693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 40519578 - 40519614
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  40519578 tatgcaatatccctaccaactgagctaagctcacggg 40519614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 41709960 - 41709992
Alignment:
Q  28 gcaatatctctaccaactaagctaagctcacgg 60  Q
    |||||||| ||||||||||||||||||||||||    
T  41709960 gcaatatccctaccaactaagctaagctcacgg 41709992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 42054369 - 42054333
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  42054369 tatgcaatatccctaccaactgagctaagctcacggg 42054333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 42490444 - 42490480
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  42490444 tatgcaatatccctaccaactgagctaagctcacggg 42490480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 44068891 - 44068855
Alignment:
Q  23 attatgcaatatctctaccaactaagctaagctcacg 59  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  44068891 attatgcattatctctaccaactaagttaagctcacg 44068855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 46965776 - 46965740
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  46965776 tatgcaatatccctaccaactgagctaagctcacggg 46965740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 50899544 - 50899580
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  50899544 tatgcaatatccctaccaactgagctaagctcacggg 50899580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 42002350 - 42002306
Alignment:
Q  17 acataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    |||||||||||||||| || |||||||||||||||||||||||||    
T  42002350 acataaattatgcaatgtccctaccaactaagctaagctcacggg 42002306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 3815096 - 3815059
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  3815096 tatgcaatatccctaccaactaagctaagctcacggga 3815059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 55260339 - 55260380
Alignment:
Q  17 acataaattatgcaatatctctaccaactaagctaagctcac 58  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  55260339 acataaattatgcaatgtccctaccaactaagctaagctcac 55260380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 25235831 - 25235867
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25235831 tatgcaatatccctaccaactaagctaagctcacggg 25235867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 55238533 - 55238569
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| |||||||||||||||||||||||||    
T  55238533 tatgcaatatccctaccaactaagctaagctcacggg 55238569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 55853142 - 55853178
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||||||||| |||||||||||||||    
T  55853142 tatgcaatatctctaccaactgagctaagctcacggg 55853178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 7686297 - 7686332
Alignment:
Q  26 atgcaatatctctaccaactaagctaagctcacggg 61  Q
    |||||||||||||||||||| |||||||||||||||    
T  7686297 atgcaatatctctaccaactgagctaagctcacggg 7686332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 21863912 - 21863951
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctca 57  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  21863912 cataaattatgcaatattcctaccaactaagctaagctca 21863951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 21919773 - 21919812
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctca 57  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  21919773 cataaattatgcaatattcctaccaactaagctaagctca 21919812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 45849090 - 45849047
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    |||||| ||||||||||| ||||||||| |||||||||||||||    
T  45849090 cataaaatatgcaatatccctaccaactgagctaagctcacggg 45849047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 481579 - 481609
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagct 55  Q
    |||||||||||||||||||||||||||||||    
T  481579 tatgcaatatctctaccaactaagctaagct 481609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 3784955 - 3784913
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgg 60  Q
    |||||||||||||||||| ||||||| | ||||||||||||||    
T  3784955 cataaattatgcaatatccctaccaattgagctaagctcacgg 3784913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 42044073 - 42044115
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||    
T  42044073 cataaattatgcaatgtctctgccaactgagctaagctcacgg 42044115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 47230939 - 47230973
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacg 59  Q
    ||||||||||||||||||||| |||||||||||||    
T  47230939 tatgcaatatctctaccaactgagctaagctcacg 47230973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 2609421 - 2609462
Alignment:
Q  19 ataaattatgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||    
T  2609421 ataaattatgcaatatccctaccaactgagctaagcttacgg 2609462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 16054558 - 16054599
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacg 59  Q
    |||| |||||||| |||||||| |||||||||||||||||||    
T  16054558 catatattatgcattatctctaacaactaagctaagctcacg 16054599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 22230468 - 22230505
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  22230468 tatgcaatatccctaccaactgagctaagctcacggga 22230505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 22788708 - 22788745
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  22788708 tatgcaatatccctaccaactgagctaagctcacggga 22788745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 40994137 - 40994174
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  40994137 tatgcaatatccctaccaactgagctaagctcacggga 40994174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 42081779 - 42081738
Alignment:
Q  17 acataaattatgcaatatctctaccaactaagctaagctcac 58  Q
    |||||||||||||||||||||| |||||| | ||||||||||    
T  42081779 acataaattatgcaatatctctgccaactgaactaagctcac 42081738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 42395263 - 42395230
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcac 58  Q
    ||||||||||| ||||||||||||||||||||||    
T  42395263 tatgcaatatccctaccaactaagctaagctcac 42395230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 43978044 - 43978007
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  43978044 tatgcaatatccctaccaactgagctaagctcacggga 43978007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 3847717 - 3847681
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  3847717 tatgcaatatccctaccaactgagctaagctcacggg 3847681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 6371150 - 6371114
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  6371150 tatgcaatatccctaccaactgagctaagctcacggg 6371114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 8433657 - 8433693
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  8433657 tatgcaatatccctaccaactgagctaagctcacggg 8433693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 8965130 - 8965094
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  8965130 tatgcaatatccctaccaactgagctaagctcacggg 8965094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 10402477 - 10402441
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||||||||| || ||||||||||||    
T  10402477 tatgcaatatctctaccaactgagttaagctcacggg 10402441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 17872123 - 17872087
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  17872123 tatgcaatatccctaccaattaagctaagctcacggg 17872087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 23705187 - 23705223
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  23705187 tatgcaatatccctaccaactgagctaagctcacggg 23705223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 24680120 - 24680156
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  24680120 tatgcaatatccctaccaactgagctaagctcacggg 24680156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 24997469 - 24997505
Alignment:
Q  26 atgcaatatctctaccaactaagctaagctcacggga 62  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  24997469 atgcaatatccctaccaactgagctaagctcacggga 24997505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 26868385 - 26868349
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  26868385 tatgcaatatccctaccaactgagctaagctcacggg 26868349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 26919502 - 26919538
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  26919502 tatgcaatatccctaccaactgagctaagctcacggg 26919538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 29257015 - 29257055
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcac 58  Q
    ||||||||||||||||||||| |||||| |||||| |||||    
T  29257015 cataaattatgcaatatctctgccaactgagctaacctcac 29257055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 35219534 - 35219570
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  35219534 tatgcaatatccctaccaactgagctaagctcacggg 35219570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 37935897 - 37935861
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  37935897 tatgcaatatccctaccaactgagctaagctcacggg 37935861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 39023211 - 39023175
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  39023211 tatgcaatatccctaccaactgagctaagctcacggg 39023175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 40051658 - 40051622
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  40051658 tatgcaatatccctaccaactgagctaagctcacggg 40051622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 43147418 - 43147454
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  43147418 tatgcaatatccctaccaactgagctaagctcacggg 43147454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 43207705 - 43207669
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  43207705 tatgcaatatccctaccaactgagctaagctcacggg 43207669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 43596931 - 43596895
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  43596931 tatgcaatatccctaccaactgagctaagctcacggg 43596895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 45139908 - 45139952
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggga 62  Q
    |||||||||| |||| || ||||||||| ||||||||||||||||    
T  45139908 cataaattatacaatgtccctaccaactgagctaagctcacggga 45139952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 46105571 - 46105535
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  46105571 tatgcaatatccctaccaactgagctaagctcacggg 46105535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 46775064 - 46775100
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  46775064 tatgcaatatccctaccaactgagctaagctcacggg 46775100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 48569210 - 48569246
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  48569210 tatgcaatatccctaccaactgagctaagctcacggg 48569246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 49901518 - 49901482
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  49901518 tatgcaatatccctaccaactgagctaagctcacggg 49901482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 50279067 - 50279111
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||||||| || ||||||||| |||||||||| |||||    
T  50279067 cataaattatgcaatgtccctaccaactgagctaagctcgcggga 50279111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 55251385 - 55251421
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  55251385 tatgcaatatccctaccaactgagctaagctcacggg 55251421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 44685202 - 44685238
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  44685202 tatgcaatatctctaccaactaagctaagctcacggg 44685238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 50536866 - 50536902
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||||||||| |||||||||||||||    
T  50536866 tatgcaatatctctaccaactgagctaagctcacggg 50536902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 14795154 - 14795111
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    |||| |||||||||| || |||||||||||||||||||||||||    
T  14795154 catatattatgcaatgtcactaccaactaagctaagctcacggg 14795111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 54769864 - 54769899
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||| ||||||||||||||||||||||||    
T  54769864 tatgcaatatccctaccaactaagctaagctcacgg 54769899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 20887796 - 20887838
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgg 60  Q
    |||||||||||||||||| ||||||||| |||||| |||||||    
T  20887796 cataaattatgcaatatccctaccaactgagctaaactcacgg 20887838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 55383915 - 55383957
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||||||| |  ||||||||||||||||||||||||    
T  55383915 cataaattatgcaatgttcctaccaactaagctaagctcacgg 55383957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 2077675 - 2077642
Alignment:
Q  17 acataaattatgcaatatctctaccaactaagct 50  Q
    ||||||||||||||||||||||||||||| ||||    
T  2077675 acataaattatgcaatatctctaccaactgagct 2077642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 4139036 - 4138999
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  4139036 tatgcaatatccctaccaactgagctaagctcacggga 4138999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 5326070 - 5326107
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  5326070 tatgcaatatcgctaccaactgagctaagctcacggga 5326107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 9176620 - 9176657
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  9176620 tatgcaatatccctaccaactgagctaagctcacggga 9176657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 24430178 - 24430145
Alignment:
Q  29 caatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||||||||| ||||||||||||||||    
T  24430178 caatatctctaccaactgagctaagctcacggga 24430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 34757565 - 34757528
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  34757565 tatgcaatatccctaccaactgagctaagctcacggga 34757528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 44764765 - 44764724
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacg 59  Q
    ||||||||||||||| || ||||||||| |||||||||||||    
T  44764765 cataaattatgcaatgtccctaccaactgagctaagctcacg 44764724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 47098768 - 47098731
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  47098768 tatgcaatatccctaccaactgagctaagctcacggga 47098731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 48546209 - 48546172
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  48546209 tatgcaatatcactaccaactgagctaagctcacggga 48546172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 882425 - 882389
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  882425 tatgcaatatccctaccaactgagctaagctcacggg 882389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 2522962 - 2522926
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  2522962 tatgcaatatccctaccaactgagctaagctcacggg 2522926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 6919997 - 6920033
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  6919997 tatgcaatatccctaccaactgagctaagctcacggg 6920033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 7269991 - 7269955
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  7269991 tatgcaatatccctaccaactgagctaagctcacggg 7269955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 7920356 - 7920320
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  7920356 tatgcaatatccctaccaactgagctaagctcacggg 7920320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 17608353 - 17608389
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  17608353 tatgcaatatccctaccaactaagttaagctcacggg 17608389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 19550542 - 19550506
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  19550542 tatgcaatatccctaccaactgagctaagctcacggg 19550506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 19999903 - 19999867
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  19999903 tatgcaatatccctaccaactgagctaagctcacggg 19999867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 22472348 - 22472384
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||||||||| || ||||||||||||    
T  22472348 tatgcaatatctctaccaactgagttaagctcacggg 22472384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 22501965 - 22502001
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  22501965 tatgcaatatccctaccaactgagctaagctcacggg 22502001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 28550353 - 28550389
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  28550353 tatgcaatatccctaccaactgagctaagctcacggg 28550389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 30555261 - 30555297
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  30555261 tatgcaatatccctaccaactgagctaagctcacggg 30555297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 31327535 - 31327571
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  31327535 tatgcaatatccctaccaactgagctaagctcacggg 31327571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 31327752 - 31327788
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  31327752 tatgcaatatccctaccaactgagctaagctcacggg 31327788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 32144620 - 32144584
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||| | |||||||||||||||||||||||||    
T  32144620 tatgcaatacccctaccaactaagctaagctcacggg 32144584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 32776254 - 32776214
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcac 58  Q
    ||||||||||||||| || ||||||||| ||||||||||||    
T  32776254 cataaattatgcaatgtccctaccaactgagctaagctcac 32776214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 37800645 - 37800681
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  37800645 tatgcaatatccctaccaactgagctaagctcacggg 37800681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 39966108 - 39966144
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  39966108 tatgcaatatccctaccaactgagctaagctcacggg 39966144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 40192192 - 40192156
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  40192192 tatgcaatatccctaccaactgagctaagctcacggg 40192156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 40548339 - 40548303
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  40548339 tatgcaatatccctaccaactgagctaagctcacggg 40548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 40933865 - 40933901
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  40933865 tatgcaatatccctaccaactgagctaagctcacggg 40933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 44652016 - 44652052
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  44652016 tatgcaatatccctaccaactgagctaagctcacggg 44652052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 45701380 - 45701344
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  45701380 tatgcaatatccctaccaactgagctaagctcacggg 45701344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 50496848 - 50496884
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  50496848 tatgcaatatccctaccaactgagctaagctcacggg 50496884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 52046420 - 52046456
Alignment:
Q  26 atgcaatatctctaccaactaagctaagctcacggga 62  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  52046420 atgcaatatccctaccaactgagctaagctcacggga 52046456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 52410275 - 52410311
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  52410275 tatgcaatatccctaccaactgagctaagctcacggg 52410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 52945931 - 52945895
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  52945931 tatgcaatatccctaccaactgagctaagctcacggg 52945895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 53163630 - 53163594
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  53163630 tatgcaatatccctaccaactgagctaagctcacggg 53163594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 53347324 - 53347360
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  53347324 tatgcaatatccctaccaactgagctaagctcacggg 53347360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 36359010 - 36358968
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgg 60  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  36359010 cataaattatgcaatatccctaccaactaagttaagctcacgg 36358968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 22437817 - 22437858
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacg 59  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  22437817 cataaattatgcaatatccctaccaactgagctaagctcacg 22437858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 25890431 - 25890471
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcac 58  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  25890431 cataaattatgcaatgtccctaccaactaagctaagctcac 25890471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 39974883 - 39974839
Alignment:
Q  19 ataaattatgcaatatctctaccaactaagctaagctcacgggac 63  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||    
T  39974883 ataaattatgcaatattcctaccaactgagctaagctcacgggac 39974839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 481054 - 481011
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||| || ||||||||| |||||||||||||||    
T  481054 cataaattatgcaatgtccctaccaactgagctaagctcacggg 481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 5326205 - 5326240
Alignment:
Q  26 atgcaatatctctaccaactaagctaagctcacggg 61  Q
    |||||||||||||||||||| |||||||||||||||    
T  5326205 atgcaatatctctaccaactgagctaagctcacggg 5326240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 39587582 - 39587547
Alignment:
Q  26 atgcaatatctctaccaactaagctaagctcacggg 61  Q
    |||||||||||||||||||| |||||||||||||||    
T  39587582 atgcaatatctctaccaactgagctaagctcacggg 39587547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 10200715 - 10200749
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacg 59  Q
    ||||||||||||||||||||| |||||||||||||    
T  10200715 tatgcaatatctctaccaactgagctaagctcacg 10200749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 14342531 - 14342573
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||||||| |||||||||||| || |||||||||||    
T  14342531 cataaattatgcaatgtctctaccaactgagttaagctcacgg 14342573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 34158691 - 34158729
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacgggac 63  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  34158691 tatgcaatatccctaccaactgagctaagctcacgggac 34158729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 12259 - 12295
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  12259 tatgcaatatccctaccaactgagctaagctcacggg 12295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 94545 - 94581
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  94545 tatgcaatatccctaccaactgagctaagctcacggg 94581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 1937346 - 1937310
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  1937346 tatgcaatatccctaccaactgagctaagctcacggg 1937310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 8265304 - 8265268
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  8265304 tatgcaatatccctaccaactgagctaagctcacggg 8265268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 10736908 - 10736944
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10736908 tatgcaatatccctaccaactgagctaagctcacggg 10736944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 11875922 - 11875886
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  11875922 tatgcaatatccctaccaactgagctaagctcacggg 11875886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 11890929 - 11890893
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  11890929 tatgcaatatccctaccaactgagctaagctcacggg 11890893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 16449161 - 16449125
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  16449161 tatgcaatatccctaccaactgagctaagctcacggg 16449125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 17027914 - 17027950
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  17027914 tatgcaatatccctaccaactgagctaagctcacggg 17027950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 17558350 - 17558386
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  17558350 tatgcaatatccctaccaactgagctaagctcacggg 17558386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 17698558 - 17698522
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  17698558 tatgcaatatccctaccaactgagctaagctcacggg 17698522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 23178925 - 23178961
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  23178925 tatgcaatatccctaccaactgagctaagctcacggg 23178961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 26022283 - 26022247
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  26022283 tatgcaatatccctaccaactgagctaagctcacggg 26022247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 28909501 - 28909465
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  28909501 tatgcaatatccctaccaactgagctaagctcacggg 28909465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 29716896 - 29716860
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  29716896 tatgcaatatccctaccaactgagctaagctcacggg 29716860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 30972851 - 30972887
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  30972851 tatgcaatatccctaccaactgagctaagctcacggg 30972887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 32719641 - 32719677
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  32719641 tatgcaatatccctaccaactgagctaagctcacggg 32719677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 34413098 - 34413062
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  34413098 tatgcaatatccctaccaactgagctaagctcacggg 34413062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 35939523 - 35939487
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  35939523 tatgcaatatccctaccaactgagctaagctcacggg 35939487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 38745313 - 38745349
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  38745313 tatgcaatatccctaccaactgagctaagctcacggg 38745349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 39362301 - 39362265
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  39362301 tatgcaatatccctaccaactgagctaagctcacggg 39362265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 41689918 - 41689882
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  41689918 tatgcaatatccctaccaactgagctaagctcacggg 41689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 43656072 - 43656036
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  43656072 tatgcaatatccctaccaactgagctaagctcacggg 43656036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 44340379 - 44340415
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  44340379 tatgcaatatccctaccaactgagctaagctcacggg 44340415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 13730131 - 13730164
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcac 58  Q
    ||||||||||||||||||||||||||||||||||    
T  13730131 tatgcaatatctctaccaactaagctaagctcac 13730164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 23274841 - 23274884
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||| || ||||||||| |||||||||||||||    
T  23274841 cataaattatgcaatgtccctaccaacttagctaagctcacggg 23274884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 4611283 - 4611242
Alignment:
Q  17 acataaattatgcaatatctctaccaactaagctaagctcac 58  Q
    |||||||||||||||| || ||||||||| ||||||||||||    
T  4611283 acataaattatgcaatgtccctaccaactgagctaagctcac 4611242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 7876042 - 7876001
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacg 59  Q
    ||||||||||||||| || ||||||||| |||||||||||||    
T  7876042 cataaattatgcaatgtccctaccaactgagctaagctcacg 7876001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 24781066 - 24781029
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  24781066 tatgcaatatccctaccaactgagctaagctcacggga 24781029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 27510291 - 27510328
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  27510291 tatgcaatatccctaccaactgagctaagctcacggga 27510328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 2229011 - 2228975
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  2229011 tatgcaatatccctaccaactgagctaagctcacggg 2228975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 2681132 - 2681096
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  2681132 tatgcaatatccctaccaactgagctaagctcacggg 2681096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 9877301 - 9877337
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9877301 tatgcaatatccctaccaactgagctaagctcacggg 9877337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 10244923 - 10244959
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10244923 tatgcaatatccctaccaactgagctaagctcacggg 10244959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 12640623 - 12640659
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  12640623 tatgcaatatccctaccaactgagctaagctcacggg 12640659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 15238925 - 15238889
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  15238925 tatgcaatatccctaccaactgagctaagctcacggg 15238889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 19753002 - 19753038
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  19753002 tatgcaatatccctaccaactgagctaagctcacggg 19753038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 23102592 - 23102628
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  23102592 tatgcaatatccctaccaactgagctaagctcacggg 23102628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 25833591 - 25833555
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  25833591 tatgcaatatccctaccaactgagctaagctcacggg 25833555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 29617441 - 29617405
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  29617441 tatgcaatatccctaccaactgagctaagctcacggg 29617405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 30940807 - 30940771
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  30940807 tatgcaatatcactaccaactgagctaagctcacggg 30940771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 35950164 - 35950128
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  35950164 tatgcaatatccctaccaactgagctaagctcacggg 35950128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 36391938 - 36391974
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  36391938 tatgcaatatccctaccaactgagctaagctcacggg 36391974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 37300133 - 37300169
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  37300133 tatgcaatatccctaccaactgagctaagctcacggg 37300169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 38151387 - 38151347
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcac 58  Q
    ||||||| |||||||||| ||||||||| ||||||||||||    
T  38151387 cataaataatgcaatatccctaccaactgagctaagctcac 38151347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 42443725 - 42443689
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  42443725 tatgcaatatccctaccaactgagctaagctcacggg 42443689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 44616638 - 44616602
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  44616638 tatgcaatatccctaccaactgagctaagctcacggg 44616602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 47641081 - 47641045
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  47641081 tatgcaatatccctaccaactgagctaagctcacggg 47641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 47999816 - 47999780
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  47999816 tatgcaatatccctaccaactgagctaagctcacggg 47999780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 21300 - 21264
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| |||||||||||||||||||||||||    
T  21300 tatgcaatatccctaccaactaagctaagctcacggg 21264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 4661132 - 4661096
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4661132 tatgcaatatccctaccaactaagctaagctcacggg 4661096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 23610346 - 23610388
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||||||| || ||||||||| ||||||||||||||    
T  23610346 cataaattatgcaatgtccctaccaactgagctaagctcacgg 23610388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 8439711 - 8439674
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  8439711 tatgcaatatccctaccaactgagctaagctcacggga 8439674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 607223 - 607187
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  607223 tatgcaatatccctaccaactgagctaagctcacggg 607187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 2251874 - 2251838
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  2251874 tatgcaatatccctaccaactgagctaagctcacggg 2251838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 3794207 - 3794243
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  3794207 tatgcaatatccctaccaactgagctaagctcacggg 3794243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 4408394 - 4408358
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  4408394 tatgcaatatccctaccaactgagctaagctcacggg 4408358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 7207880 - 7207844
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  7207880 tatgcaatatccctaccaactgagctaagctcacggg 7207844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 7545365 - 7545329
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  7545365 tatgcaatatccctaccaactgagctaagctcacggg 7545329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 7865389 - 7865425
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  7865389 tatgcaatatccctaccaactgagctaagctcacggg 7865425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 9246416 - 9246452
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9246416 tatgcaatatccctaccaactgagctaagctcacggg 9246452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 9372235 - 9372271
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9372235 tatgcaatatccctaccaactgagctaagctcacggg 9372271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 9435662 - 9435626
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9435662 tatgcaatatccctaccaactgagctaagctcacggg 9435626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 10934635 - 10934599
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10934635 tatgcaatatccctaccaactgagctaagctcacggg 10934599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 15091484 - 15091448
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  15091484 tatgcaatatccctaccaactgagctaagctcacggg 15091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 15963970 - 15964014
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggga 62  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||    
T  15963970 cataaaatatgcaatatccctaccaactgagctaagctcagggga 15964014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 17441873 - 17441909
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  17441873 tatgcaatatccctaccaactgagctaagctcacggg 17441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 17454779 - 17454815
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||||||||| || ||||||||||||    
T  17454779 tatgcaatatctctaccaactgagataagctcacggg 17454815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 19953862 - 19953898
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  19953862 tatgcaatatccctaccaactgagctaagctcacggg 19953898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 30885604 - 30885640
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  30885604 tatgcaatatccctaccaactgagctaagctcacggg 30885640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 33573853 - 33573817
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  33573853 tatgcaatatccctaccaactgagctaagctcacggg 33573817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 2328628 - 2328592
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| |||||||||||||||||||||||||    
T  2328628 tatgcaatatccctaccaactaagctaagctcacggg 2328592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 18928763 - 18928723
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcac 58  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  18928763 cataaattatgcaatatccctaccaactgagctaagctcac 18928723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 39919127 - 39919163
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| |||||||||||||||||||||||||    
T  39919127 tatgcaatatccctaccaactaagctaagctcacggg 39919163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 20145591 - 20145626
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaag 53  Q
    |||||||||||||||||| |||||||||||||||||    
T  20145591 cataaattatgcaatatccctaccaactaagctaag 20145626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 30819265 - 30819226
Alignment:
Q  26 atgcaatatctctaccaactaagctaagctcacgggactg 65  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  30819265 atgcaatatctctaccaattgagctaagctcacgggactg 30819226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 42885865 - 42885830
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||||||||||||| ||||||||||||||    
T  42885865 tatgcaatatctctaccaacttagctaagctcacgg 42885830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 18049649 - 18049691
Alignment:
Q  19 ataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||||| ||||||| | |||||||||||||||    
T  18049649 ataaattatgcaatatccctaccaattgagctaagctcacggg 18049691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 20501438 - 20501397
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacg 59  Q
    ||||||||||||||| |||||||||||| || ||||||||||    
T  20501438 cataaattatgcaatgtctctaccaactgagttaagctcacg 20501397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 35515548 - 35515511
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  35515548 tatgcaatatccctaccaactgagctaagctcacggga 35515511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 1269201 - 1269237
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||||||| | |||||||||||||||    
T  1269201 tatgcaatatctctaccaattgagctaagctcacggg 1269237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 1743163 - 1743127
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  1743163 tatgcaatatccctaccaactgagctaagctcacggg 1743127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 4417719 - 4417755
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  4417719 tatgcaatatccctaccaactgagctaagctcacggg 4417755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 4745910 - 4745946
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  4745910 tatgcaatatccctaccaactgagctaagctcacggg 4745946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 6518810 - 6518846
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  6518810 tatgcaatatccctaccaactgagctaagctcacggg 6518846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 9125699 - 9125663
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9125699 tatgcaatatcgctaccaactgagctaagctcacggg 9125663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 9688706 - 9688742
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  9688706 tatgcaatatttctacaaactaagctaagctcacggg 9688742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 9835069 - 9835033
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9835069 tatgcaatatccctaccaactgagctaagctcacggg 9835033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 11897284 - 11897248
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  11897284 tatgcaatatccctaccaactgagctaagctcacggg 11897248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 12463792 - 12463756
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  12463792 tatgcaatatccctaccaactgagctaagctcacggg 12463756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 12891593 - 12891557
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  12891593 tatgcaatatccctaccaactgagctaagctcacggg 12891557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 16603434 - 16603398
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  16603434 tatgcaatatccctaccaactgagctaagctcacggg 16603398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 16971654 - 16971622
Alignment:
Q  29 caatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||||||||| |||||||||||||||    
T  16971654 caatatctctaccaactgagctaagctcacggg 16971622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 17545206 - 17545242
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  17545206 tatgcaatatccctaccaactgagctaagctcacggg 17545242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 19985543 - 19985499
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggga 62  Q
    |||| ||||||||||||| ||||||||| ||||||| ||||||||    
T  19985543 catatattatgcaatatccctaccaactgagctaaggtcacggga 19985499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 21918088 - 21918052
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  21918088 tatgcaatatccctaccaactgagctaagctcacggg 21918052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 23292452 - 23292488
Alignment:
Q  26 atgcaatatctctaccaactaagctaagctcacggga 62  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  23292452 atgcaatatccctaccaactgagctaagctcacggga 23292488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 25472617 - 25472653
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  25472617 tatgcaatatccctaccaactgagctaagctcacggg 25472653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 25648119 - 25648155
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  25648119 tatgcaatatccctaccaactgagctaagctcacggg 25648155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 27765293 - 27765257
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  27765293 tatgcaatatccctaccaactgagctaagctcacggg 27765257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 32505724 - 32505688
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  32505724 tatgcaatatccctaccaactgagctaagctcacggg 32505688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 32550219 - 32550179
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcac 58  Q
    ||||||||||||||| |||||||||||| | ||||||||||    
T  32550219 cataaattatgcaatgtctctaccaactgaactaagctcac 32550179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 41083564 - 41083604
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcac 58  Q
    ||||||||||||||| |||||||||||| |||||| |||||    
T  41083564 cataaattatgcaatgtctctaccaactgagctaaactcac 41083604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 41179837 - 41179873
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  41179837 tatgcaatatccctaccaactgagctaagctcacggg 41179873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 42320353 - 42320317
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  42320353 tatgcaatatccctaccaactgagctaagctcacggg 42320317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 8852 - 8895
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacggg 61  Q
    |||||| ||||||||||| ||||||||| |||||||||||||||    
T  8852 cataaaatatgcaatatccctaccaactgagctaagctcacggg 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 15048 - 15006
Alignment:
Q  18 cataaattatgcaatatctctaccaactaagctaagctcacgg 60  Q
    ||||||||||||||| || ||||||||| ||||||||||||||    
T  15048 cataaattatgcaatgtccctaccaactgagctaagctcacgg 15006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 894 - 931
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  894 tatgcaatatccctaccaactgagctaagctcacggga 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 12295 - 12332
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggga 62  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  12295 tatgcaatatccctaccaactgagctaagctcacggga 12332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 54 - 90
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  54 tatgcaatatccctaccaactgagctaagctcacggg 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 9002 - 8966
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9002 tatgcaatatccctaccaactgagctaagctcacggg 8966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 4048 - 4084
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  4048 tatgcaatatccctaccaactgagctaagctcacggg 4084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 17656 - 17620
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  17656 tatgcaatatccctaccaactgagctaagctcacggg 17620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 46562 - 46526
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  46562 tatgcaatatccctaccaactgagctaagctcacggg 46526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 45920 - 45884
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  45920 tatgcaatatccctaccaactgagctaagctcacggg 45884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 10860 - 10896
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10860 tatgcaatatccctaccaactgagctaagctcacggg 10896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 59819 - 59783
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  59819 tatgcaatatccctaccaactgagctaagctcacggg 59783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 266731 - 266767
Alignment:
Q  25 tatgcaatatctctaccaactaagctaagctcacggg 61  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  266731 tatgcaatatccctaccaactgagctaagctcacggg 266767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University