View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19878_low_112 (Length: 250)
Name: NF19878_low_112
Description: NF19878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19878_low_112 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 8600779 - 8600581
Alignment:
| Q |
1 |
agctgatttcagattgtgaatgaaatacactgaaatatttataaaatagtagaatattaaccatttttattaacaatttactttccgaaat-gaaaactt |
99 |
Q |
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|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| |
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| T |
8600779 |
agctgatttcagattgagaatgaaatacactgaaatctttataaaatagtagaatattaaccatttttattaacgatttactttccaaaattgaaaactt |
8600680 |
T |
|
| Q |
100 |
tatgttgagggaaccattatttcacagaaccgaaccatcatgacttctatcctgtagcatatttatacaaattttgtaatcaaaatgttttttcttagc |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |
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| T |
8600679 |
tatgttgagggaaccattatttcacagaaccgaaccatcatgacttctatcctgtagcatgtttatacaaattttgcaatcaaaatgttttttcttagc |
8600581 |
T |
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