View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19878_low_118 (Length: 239)
Name: NF19878_low_118
Description: NF19878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19878_low_118 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 30873789 - 30873995
Alignment:
| Q |
15 |
caaaggaccaacaacatttcctcccacaacttgaccttggcctccgccaaggaacacactcaaacttgtagctcctggaggagctggtggtggtagaaac |
114 |
Q |
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| T |
30873789 |
caaaggaccaacaacatttcctcccacaacttgaccttggcctccaccaaggaacacactcaaacttgtagctcctggaggagctggtggtggtagaaac |
30873888 |
T |
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| Q |
115 |
gatccggacaaagaaagtatttcaaaccttccgtgtaaagtcactacagatcctgcggcagctggctgtcgcagggtcacgttagtgactgttccactcc |
214 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
30873889 |
gatccggacaaagaaagtatttcaaaccttccatgtaaagtcactacagatcctgcggcagctggctgtcgcaaggtcacgttagtgactgttccactcc |
30873988 |
T |
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| Q |
215 |
cactaag |
221 |
Q |
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| T |
30873989 |
cactaag |
30873995 |
T |
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