View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19878_low_84 (Length: 315)

Name: NF19878_low_84
Description: NF19878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19878_low_84
NF19878_low_84
[»] chr2 (7 HSPs)
chr2 (13-308)||(22827354-22827643)
chr2 (91-315)||(16878472-16878695)
chr2 (91-315)||(16990605-16990828)
chr2 (90-260)||(19070-19240)
chr2 (91-307)||(6655-6870)
chr2 (97-307)||(21338553-21338763)
chr2 (142-261)||(29791054-29791174)
[»] scaffold0042 (1 HSPs)
scaffold0042 (25-310)||(10027-10313)
[»] chr1 (6 HSPs)
chr1 (17-315)||(24057867-24058158)
chr1 (101-310)||(23308208-23308417)
chr1 (179-315)||(43516598-43516734)
chr1 (128-285)||(24090356-24090512)
chr1 (137-239)||(10215863-10215965)
chr1 (137-224)||(10215991-10216078)
[»] chr7 (6 HSPs)
chr7 (97-315)||(39888526-39888742)
chr7 (97-309)||(3083319-3083529)
chr7 (20-315)||(15561776-15562055)
chr7 (142-261)||(11245506-11245626)
chr7 (90-150)||(17147486-17147546)
chr7 (90-147)||(18380601-18380658)
[»] chr8 (9 HSPs)
chr8 (17-315)||(24539761-24540054)
chr8 (22-307)||(19440678-19440962)
chr8 (22-307)||(19576828-19577112)
chr8 (80-226)||(23807823-23807971)
chr8 (141-259)||(25239280-25239399)
chr8 (141-261)||(25188805-25188926)
chr8 (137-237)||(21539458-21539558)
chr8 (200-259)||(30613627-30613686)
chr8 (90-157)||(23811003-23811070)
[»] chr4 (11 HSPs)
chr4 (17-315)||(28086368-28086669)
chr4 (91-307)||(10701973-10702188)
chr4 (91-307)||(10915743-10915958)
chr4 (166-307)||(10668933-10669073)
chr4 (166-307)||(10882572-10882712)
chr4 (97-315)||(14283001-14283216)
chr4 (91-296)||(11169594-11169801)
chr4 (98-307)||(14817315-14817523)
chr4 (90-259)||(14827135-14827304)
chr4 (91-150)||(22674684-22674743)
chr4 (141-249)||(21324010-21324120)
[»] chr6 (4 HSPs)
chr6 (15-296)||(9345273-9345556)
chr6 (179-309)||(26228320-26228449)
chr6 (91-307)||(16262010-16262224)
chr6 (235-296)||(14733262-14733323)
[»] chr3 (5 HSPs)
chr3 (91-306)||(22800918-22801134)
chr3 (179-315)||(22805791-22805927)
chr3 (179-307)||(19243688-19243816)
chr3 (179-315)||(21950542-21950678)
chr3 (187-262)||(3575746-3575821)
[»] chr5 (4 HSPs)
chr5 (92-261)||(37984590-37984761)
chr5 (17-226)||(29253145-29253351)
chr5 (159-259)||(21231260-21231361)
chr5 (91-150)||(22752537-22752597)
[»] scaffold0290 (1 HSPs)
scaffold0290 (97-226)||(5507-5636)
[»] scaffold0005 (2 HSPs)
scaffold0005 (98-307)||(22188-22396)
scaffold0005 (90-259)||(12405-12574)
[»] scaffold0047 (1 HSPs)
scaffold0047 (90-259)||(23945-24114)
[»] scaffold0627 (1 HSPs)
scaffold0627 (25-169)||(1198-1343)


Alignment Details
Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 308
Target Start/End: Original strand, 22827354 - 22827643
Alignment:
Q  13 aatatatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatccattctttatgttagaagttag 112  Q
    ||||||||||||||||||||||||||||||||||||  ||||  |||||||||||||  |||||||| ||||| |||      |||||||||||||||||    
T  22827354 aatatatcttcataacttgttctattgcataagcttattcttatctcgaaacatatcgtaatcatat-catattcatt-----tttatgttagaagttag 22827447  T
Q  113 catgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaag 212  Q
    | |||||||||||||||||| ||||||||||||||||||||  ||  | |||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  22827448 cgtgtaacaaacaacattatcttggttcattttacggagtgcttcgagaggagtaaccccgagtacattcccttacttgaccgatgaaaacctaactaag 22827547  T
Q  213 gtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataa 308  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||   | ||||||| ||||||||||||||||||||||||||||||||||    
T  22827548 gtacatcggactccctcattgacgtgcgggcctaccttgcggagcgtatctcgttcccctgacgagaacctctcgtatcccccttggcgtggataa 22827643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 91 - 315
Target Start/End: Complemental strand, 16878695 - 16878472
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| ||||||||| ||||||| |  |||||||||  |||| ||||||||||||||||||||  || ||||||||||||||||||||| ||||| ||||    
T  16878695 cattcattatgttaggagttagcgttgaacaaacaatgttatcttggttcattttacggagtgcatcgggtggagtaaccccgagtacattcccttactt 16878596  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||||| ||| | |||| | |||||||||||||||    
T  16878595 gaccgatgaaaacctagctaaggtacaccggactccctcagtgacatgcaggcctaccttgtggagcgtatcctgtttccctcg-gagaacctctcgtat 16878497  T
Q  291 cccccttggcgtggataacgaaaag 315  Q
    |||||||||||||||||||| ||||    
T  16878496 cccccttggcgtggataacggaaag 16878472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 91 - 315
Target Start/End: Complemental strand, 16990828 - 16990605
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| ||||||||| ||||||| |  |||||||||  |||| ||||||||||||||||||||  || ||||||||||||||||||||| ||||| ||||    
T  16990828 cattcattatgttaggagttagcgttgaacaaacaatgttatcttggttcattttacggagtgcatcgggtggagtaaccccgagtacattcccttactt 16990729  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||||| ||| | |||| | |||||||||||||||    
T  16990728 gaccgatgaaaacctagctaaggtacaccggactccctcagtgacatgcaggcctaccttgtggagcgtatcctgtttccctcg-gagaacctctcgtat 16990630  T
Q  291 cccccttggcgtggataacgaaaag 315  Q
    |||||||||||||||||||| ||||    
T  16990629 cccccttggcgtggataacggaaag 16990605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 90 - 260
Target Start/End: Complemental strand, 19240 - 19070
Alignment:
Q  90 ccattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcact 189  Q
    |||||| |||||||||| |||||| |  ||||||||| ||||| |  |||||||||||||||||| || ||||| |||||||||||||||||| |  ||     
T  19240 ccattcattatgttagaggttagcgttgaacaaacaatattatctgagttcattttacggagtgtatcgggtggcgtaaccccgagtacaatctcataca 19141  T
Q  190 tgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgta 260  Q
    |||||||||||  ||||||||||||||||| |||| |||||||| |||||||||| ||||||||| |||||    
T  19140 tgaccgatgaattcctagctaaggtacatcagacttcctcagtgtcgtgcgggcccaccttgcggtgcgta 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 307
Target Start/End: Complemental strand, 6870 - 6655
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| |||||||||| |||||| |  ||||||||| ||||| |  |||||||||| ||||||| || ||||||||||||| ||||||||||||  || |    
T  6870 cattcattatgttagaggttagcgttgaacaaacaatattatctgagttcattttatggagtgtatcgggtggagtaaccctgagtacaatcccatacat 6771  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    |||| |||||  ||||||||||| ||||| ||||||||||||| ||||||||||  ||||||| ||| ||| | | |||||||||| ||| | || ||||    
T  6770 gacctatgaattcctagctaaggcacatcagactccctcagtgtcgtgcgggccccccttgcgaagcttatcccgttcccctggcgtgaatcccttgtat 6671  T
Q  291 cccccttggcgtggata 307  Q
    ||||| |||||||||||    
T  6670 ccccc-tggcgtggata 6655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 97 - 307
Target Start/End: Complemental strand, 21338763 - 21338553
Alignment:
Q  97 ttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    |||||||||| |||| | |  ||||||||| ||||| |  |||||||||| ||||||| || ||||||||||||||||||||||||||  || |||||||    
T  21338763 ttatgttagaggttaacgttgaacaaacaatattatctgagttcattttatggagtgtatcgggtggagtaaccccgagtacaatcccatacatgaccga 21338664  T
Q  197 tgaaaacctagctaaggtacatcggactccctcagtgacgtgcggg-cctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccc 295  Q
    ||||  ||||||||||| |||| | |||||||||||| |||||||| ||  ||||||||||| ||| | | |||||||| | ||||| || |||||||||    
T  21338663 tgaattcctagctaaggcacattgaactccctcagtgtcgtgcgggcccccccttgcggagcttatcccgttcccctggtgtgaaccccttgtatccccc 21338564  T
Q  296 ttggcgtggata 307  Q
     |||||||||||    
T  21338563 -tggcgtggata 21338553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 29791174 - 29791054
Alignment:
Q  142 ttttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcg 240  Q
    ||||||||| | | || ||||||||||||||||||||||||||| |||| |||||||||  ||||||||||||||||| |||||| |||| || ||||||    
T  29791174 ttttacggaatctatcgggtggagtaaccccgagtacaatcccttactttaccgatgaattcctagctaaggtacatcagactcctctcaatgtcgtgcg 29791075  T
Q  241 ggcctaccttgcggagcgtat 261  Q
    || |||||||| |||||||||    
T  29791074 ggtctaccttgtggagcgtat 29791054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 25 - 310
Target Start/End: Complemental strand, 10313 - 10027
Alignment:
Q  25 taacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatc--cattctttatgttagaagttagcatgtaacaa 122  Q
    ||||||||||||||| ||||||||| ||||  || ||||||||||| |||||||||||||  |||   ||||| |||||||||  |||||| |  |||||    
T  10313 taacttgttctattggataagcttgttcttttcttgaaacatatcataatcatattcataatcatgttcattcattatgttagcggttagcgttgaacaa 10214  T
Q  123 acaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcgga 222  Q
    | || |||||||  |||||||||||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10213 aaaatattatttgagttcattttacggagtgtatctg-tggagtaaccccgagtacaatcccttacttgaccgatgaaaacctagctaaggtacatcgga 10115  T
Q  223 ctccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataacg 310  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||  ||||||||    
T  10114 ctccctcagtgacgtgcgggcctaccttgcggagcgtatcccgttcccctggcgagaacctctcgtatcccccttggcaaggataacg 10027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 3e-85; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 24058158 - 24057867
Alignment:
Q  17 tatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatccattctttatgttagaagttagcatg 116  Q
    |||||||||||||||||||||||| |||||||  ||||  |||||||||||||  |||||||| ||||| ||||      ||||||||||||||||| ||    
T  24058158 tatcttcataacttgttctattgcgtaagcttattcttatctcgaaacatatcgtaatcatat-catatacatc------ttatgttagaagttagcgtg 24058066  T
Q  117 taacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtac 216  Q
    |||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  24058065 taacaaacaacattatcttggttcattttacggagtgcatcgagtggagtaaccccgagtacaatcccttacttgaccgatgaaaatctagctaaggtac 24057966  T
Q  217 atcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    ||| ||||||||| |||||||||||||||||||| ||||||||||   | |||||| |||||||||||||||||||| ||||| |||||||||| ||||    
T  24057965 atcagactccctcggtgacgtgcgggcctaccttacggagcgtatctcgttcccctagcgagaacctctcgtatccctcttggtgtggataacggaaag 24057867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 101 - 310
Target Start/End: Complemental strand, 23308417 - 23308208
Alignment:
Q  101 gttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaa 200  Q
    |||||| ||||||||  ||||||||   |||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  23308417 gttagaggttagcattgaacaaacatagttatcttggttcattttacggagtgtatcgggtggagtaaccccgagtacaatcccttacttgaccgatgaa 23308318  T
Q  201 aacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggc 300  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| | | | ||||||||||||||||||||||||||||||||    
T  23308317 aacctagctaaggtacatcggactctctcactgacgtgcgagcctaccttgcggagcgtatcccgtttccctggcgagaacctctcgtatcccccttggc 23308218  T
Q  301 gtggataacg 310  Q
    ||||||||||    
T  23308217 gtggataacg 23308208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 43516734 - 43516598
Alignment:
Q  179 aatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgag 278  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||   | |||||| | |||    
T  43516734 aatcccttacttgaccgatgaaaacctagctaaggtacatcagactccctcagtggcgtgcgggcctaccttgcggagtgtatctcgttccccttgtgag 43516635  T
Q  279 aacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    ||||| || ||||||| |||| |||||||||| ||||    
T  43516634 aacctgtcatatccccattggtgtggataacggaaag 43516598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 128 - 285
Target Start/End: Complemental strand, 24090512 - 24090356
Alignment:
Q  128 attattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactccc 227  Q
    ||||| ||| |||||||||||||| |   ||||||||||||||| ||||| ||||||  || ||||||||||||||||||||||| ||||||||||||||    
T  24090512 attatcttgattcattttacggagagcc-caggtggagtaaccctgagtataatcccatacatgaccgatgaaaacctagctaagatacatcggactccc 24090414  T
Q  228 tcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctct 285  Q
    ||||||||||| | |||  |||||  |||| ||| | | |||||||||||||||||||    
T  24090413 tcagtgacgtgtgtgccccccttgtagagcttatcccgttcccctggcgagaacctct 24090356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 10215965 - 10215863
Alignment:
Q  137 gttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacg 236  Q
    |||||||||||||||||| || | |||||||||||||||||||||| |  || |||||||||||  ||||||||||||||||||||||||||||||| ||    
T  10215965 gttcattttacggagtgtatcggatggagtaaccccgagtacaatctcatacatgaccgatgaattcctagctaaggtacatcggactccctcagtgtcg 10215866  T
Q  237 tgc 239  Q
    |||    
T  10215865 tgc 10215863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 10216078 - 10215991
Alignment:
Q  137 gttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggact 224  Q
    |||||||||||||||||| || | |||||||||||||||||||||| |  || |||||||||||  ||||||||||||||||||||||    
T  10216078 gttcattttacggagtgtatcggatggagtaaccccgagtacaatctcatacatgaccgatgaattcctagctaaggtacatcggact 10215991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 7e-83; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 97 - 315
Target Start/End: Original strand, 39888526 - 39888742
Alignment:
Q  97 ttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||  || ||||||||||||||||||||| ||||| ||||||||||    
T  39888526 ttatgttagaagttagcgtgtaacaaacaacattatcttggttcattttacggagtgcatcgggtggagtaaccccgagtacattcccttacttgaccga 39888625  T
Q  197 tgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccct 296  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | | ||||||   |||||||||||||||||||||    
T  39888626 tgaaaacctagctaaggtacaccggactccctcagtgacgtgcgggcctaccttgcggagcgtatcccgttcccct--tgagaacctctcgtatccccct 39888723  T
Q  297 tggcgtggataacgaaaag 315  Q
    |||||||||||||| ||||    
T  39888724 tggcgtggataacggaaag 39888742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 97 - 309
Target Start/End: Original strand, 3083319 - 3083529
Alignment:
Q  97 ttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||| | ||||||||    
T  3083319 ttatgttagaagttagcgtgtaacaa-caacattatcttggttcattttacggagtgtatcaggtggagtaaccccgagtacattcccttaattgaccga 3083417  T
Q  197 tgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccct 296  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||  ||||| ||| | | |||||| | |||||||||||||||||||||    
T  3083418 tgaaaacctagctaaggtacactggactccctcagtgacgtgcgggcctaccttttggagcatatcccgttccccttg-gagaacctctcgtatccccct 3083516  T
Q  297 tggcgtggataac 309  Q
    ||| |||||||||    
T  3083517 tggtgtggataac 3083529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 15562055 - 15561776
Alignment:
Q  20 cttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatccattctttatgttagaagttagcatgtaa 119  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||| |  |||||||||||||| |||    ||||||||||| |||||||  |||||    
T  15562055 cttcataacttgttctattgcataagcttgttcttaactcgaaacataacgtaatcatattcatattcat----tctttatgttataagttagtgtgtaa 15561960  T
Q  120 caaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtac--aatccctcacttgaccgatgaaaacctagctaaggtaca 217  Q
    ||||||||||||| |||||||| ||||||              || ||| |||  | |   ||| ||| ||||||||| ||| |||||||||||||||||    
T  15561959 caaacaacattatcttggttcaatttacg--------------gattaatccctggaaattaattccttacttgaccgttgagaacctagctaaggtaca 15561874  T
Q  218 tcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| | | |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  15561873 tcggactccctcaatgacgtgcgggccgaccttgcggagcgtatcccgttccccttgcgagaacctctcgtatcccccttggcgtggataacggaaag 15561776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 11245626 - 11245506
Alignment:
Q  142 ttttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcg 240  Q
    ||||||||| ||| ||  |||||||||||||||||||||||||| |||| |||||||||  |||||||||||||||||||||||| || | || ||| ||    
T  11245626 ttttacggaatgtatcgagtggagtaaccccgagtacaatcccttactttaccgatgaattcctagctaaggtacatcggactcctcttaatgccgtacg 11245527  T
Q  241 ggcctaccttgcggagcgtat 261  Q
    |||| ||||||||||||||||    
T  11245526 ggccgaccttgcggagcgtat 11245506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 17147546 - 17147486
Alignment:
Q  90 ccattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacgga 150  Q
    |||||| ||||||||| ||||||| |||||||||||||||||| ||||||| |||||||||    
T  17147546 ccattcattatgttaggagttagcgtgtaacaaacaacattatcttggttcgttttacgga 17147486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 18380601 - 18380658
Alignment:
Q  90 ccattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttac 147  Q
    |||||| ||||||||| ||||||  |||||||||||||||||| ||||||| ||||||    
T  18380601 ccattcattatgttagcagttagtgtgtaacaaacaacattatcttggttcgttttac 18380658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 3e-82; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 24539761 - 24540054
Alignment:
Q  17 tatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatccattctttatgttagaagttagcatg 116  Q
    |||||||||||||| ||||||||||||| |||| ||||| |||| ||  || |  || ||||||||||| ||| |     |||||||||| |||||  ||    
T  24539761 tatcttcataacttattctattgcataaacttgttcttgtctcgtaatgtaacgtaaacatattcatattcattc-----ttatgttagatgttagtgtg 24539855  T
Q  117 taacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtac 216  Q
    |||||||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24539856 taacaaacaacattatcttggttcattttacggagtgcatcgagtggagtaaccccgagtacaatcccttacttgacagatgaaaacctagctaaggtac 24539955  T
Q  217 atcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    | | ||||||||||||||||||||||| ||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24539956 accagactccctcagtgacgtgcgggcataccttgcggaccgtatccagttcccctggcgagaacctctcgtatcccccttggcgtggataacggaaag 24540054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 307
Target Start/End: Complemental strand, 19440962 - 19440678
Alignment:
Q  22 tcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatc--cattctttatgttagaagttagcatgtaa 119  Q
    ||||||||| ||||||||||| |||||| ||||| || ||||||||||| |||||||| ||||  |||   ||||| |||||||||| |||||| |  ||    
T  19440962 tcataactttttctattgcatgagcttgttcttgtcttgaaacatatcataatcatat-cataatcatgttcattcattatgttagaggttagcgttgaa 19440864  T
Q  120 caaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatc 219  Q
    ||||||| ||||| |  ||||||||||||| |||| || ||||||||||||||||||||| ||||  || |||||||||||||||||| |||||||||||    
T  19440863 caaacaatattatctgagttcattttacggggtgtatcgggtggagtaaccccgagtacactcccatacatgaccgatgaaaacctagttaaggtacatc 19440764  T
Q  220 ggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggata 307  Q
    | ||||||||| || | || |||||  ||||||||||| |||   | |||||||||| |||||||| ||||||||| |||||||||||    
T  19440763 gaactccctcaatgtcatgtgggcc-cccttgcggagcttatcgcgttcccctggcgtgaacctcttgtatccccc-tggcgtggata 19440678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 307
Target Start/End: Complemental strand, 19577112 - 19576828
Alignment:
Q  22 tcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatc--cattctttatgttagaagttagcatgtaa 119  Q
    ||||||||| ||||||||||| |||||| ||||| || ||||||||||| |||||||| ||||  |||   ||||| |||||||||| |||||| |  ||    
T  19577112 tcataactttttctattgcatgagcttgttcttgtcttgaaacatatcataatcatat-cataatcatgttcattcattatgttagaggttagcgttgaa 19577014  T
Q  120 caaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatc 219  Q
    ||||||| ||||| |  ||||||||||||| |||| || ||||||||||||||||||||| ||||  || |||||||||||||||||| |||||||||||    
T  19577013 caaacaatattatctgagttcattttacggggtgtatcgggtggagtaaccccgagtacactcccatacatgaccgatgaaaacctagttaaggtacatc 19576914  T
Q  220 ggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggata 307  Q
    | ||||||||| || | || |||||  ||||||||||| |||   | |||||||||| |||||||| ||||||||| |||||||||||    
T  19576913 gaactccctcaatgtcatgtgggcc-cccttgcggagcttatcgcgttcccctggcgtgaacctcttgtatccccc-tggcgtggata 19576828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 226
Target Start/End: Complemental strand, 23807971 - 23807823
Alignment:
Q  80 tcatatccat--ccattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagta 177  Q
    ||||||||||  |||||| |||||||||| |||||  |||||| ||||||||||| ||||||||||||||||||||| || | |||||||||||||| ||    
T  23807971 tcatatccatagccattcattatgttagaggttagtgtgtaacgaacaacattatcttggttcattttacggagtgtatcggatggagtaaccccgatta 23807872  T
Q  178 caatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc 226  Q
    |||||||| |||||| |||||||  ||||||||||||||||| ||||||    
T  23807871 caatcccttacttgatcgatgaattcctagctaaggtacatcagactcc 23807823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 25239280 - 25239399
Alignment:
Q  141 attttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgc 239  Q
    |||||||||||||| || ||||||||||||||||||| ||||||  ||||||||||||||  ||||||||||||||||| |||||| ||||||| |||||    
T  25239280 attttacggagtgtatcgggtggagtaaccccgagtataatcccatacttgaccgatgaattcctagctaaggtacatcagactcctctcagtgtcgtgc 25239379  T
Q  240 gggcctaccttgcggagcgt 259  Q
    |||||||||||| |||||||    
T  25239380 gggcctaccttgtggagcgt 25239399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 25188926 - 25188805
Alignment:
Q  141 attttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgc 239  Q
    ||||||| |||||| || |||||||||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||| || | || |||||    
T  25188926 attttacagagtgtatcgggtggagtaacctcgagtacaatcccttactttaccgatgaaatcctagctaaggtacatcggactcctcttaatgtcgtgc 25188827  T
Q  240 gggcctaccttgcggagcgtat 261  Q
    |||||||||||||||| |||||    
T  25188826 gggcctaccttgcggaacgtat 25188805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 21539558 - 21539458
Alignment:
Q  137 gttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacg 236  Q
    ||||||||||||||| |   ||||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21539558 gttcattttacggagagccccaggtggagtaaccccgagtacaatcccatacatgaccgatgaaaacctagctaaggcacatcggactccctcagtgacg 21539459  T
Q  237 t 237  Q
    |    
T  21539458 t 21539458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 30613627 - 30613686
Alignment:
Q  200 aaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgt 259  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  30613627 aaacctagctagggtacatcagactccctcagtgtcgtgcgggcctaccttgcggagcgt 30613686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 23811070 - 23811003
Alignment:
Q  90 ccattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtc 157  Q
    |||||| |||| ||||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||    
T  23811070 ccattcattattttagaggttagcgtgtaacaaataacattatcttggttcattttacggagtgtgtc 23811003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 28086368 - 28086669
Alignment:
Q  17 tatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccat--ccattctttatgttagaagttagca 114  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||| |||   ||||||||| |||||||||||||     
T  28086368 tatcgtcataacttgttctattgcataagcttgttcttaactcgaaacatatcgtaatcatattcatatgcataatcattctttaagttagaagttagcg 28086467  T
Q  115 tgtaacaaacaacattattttggttcattttacggagt-gtgtcaggtggagtaaccccg--agtacaatccctcacttgaccgatgaaaacctagctaa 211  Q
    |||||||||||||||||| ||||||||||||||||| |  |  | |||||||||||||||  |||  ||||||| |||||||||||||||||||||||||    
T  28086468 tgtaacaaacaacattatcttggttcattttacggattaatcccgggtggagtaaccccggaagt-taatcccttacttgaccgatgaaaacctagctaa 28086566  T
Q  212 ggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatcccccttggcgtggataacga 311  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||| |   | |||| | |||||||||||||||||||||||||||||||||||     
T  28086567 ggtacatcggactccctctgtgacgtgcgggcctaccttacggagcgtatcccatttcccttg-gagaacctctcgtatcccccttggcgtggataacgg 28086665  T
Q  312 aaag 315  Q
    ||||    
T  28086666 aaag 28086669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 91 - 307
Target Start/End: Complemental strand, 10702188 - 10701973
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| |||||||||| |||||| |  ||||||||   |||| ||||||| |||||| |||||  || ||||||||||||||||||||||||||| || |    
T  10702188 cattcattatgttagaggttagcgttgaacaaacatagttatcttggttcgttttacagagtgcatcgggtggagtaaccccgagtacaatcccttacat 10702089  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| |||||||| |||||||||||||||| | ||| |||||||||| |||||||| ||||    
T  10702088 gaccgatgaaaacctaggtaaggtacatcagactccctcagtgtcgtgcgggtctaccttgcggagcgtgtcctgttcccctggcgtgaacctcttgtat 10701989  T
Q  291 cccccttggcgtggata 307  Q
    ||||| |||||||||||    
T  10701988 ccccc-tggcgtggata 10701973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 91 - 307
Target Start/End: Complemental strand, 10915958 - 10915743
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| |||||||||| |||||| |  ||||||||   |||| ||||||| |||||| |||||  || ||||||||||||||||||||||||||| || |    
T  10915958 cattcattatgttagaggttagcgttgaacaaacatagttatcttggttcgttttacagagtgcatcgggtggagtaaccccgagtacaatcccttacat 10915859  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| |||||||| |||||||||||||||| | ||| |||||||||| |||||||| ||||    
T  10915858 gaccgatgaaaacctaggtaaggtacatcagactccctcagtgtcgtgcgggtctaccttgcggagcgtgtcctgttcccctggcgtgaacctcttgtat 10915759  T
Q  291 cccccttggcgtggata 307  Q
    ||||| |||||||||||    
T  10915758 ccccc-tggcgtggata 10915743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 166 - 307
Target Start/End: Original strand, 10668933 - 10669073
Alignment:
Q  166 taaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctg 265  Q
    |||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| | |||    
T  10668933 taaccccgagtacaatcccttacacgaccgatgaaaacctagataaggtacatcggactccctcagtgtcgtgcgggtctaccttgcggagcgtgtcctg 10669032  T
Q  266 atcccctggcgagaacctctcgtatcccccttggcgtggata 307  Q
     |||||||||| |||||||| ||||||||| |||||||||||    
T  10669033 ttcccctggcgtgaacctcttgtatccccc-tggcgtggata 10669073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 166 - 307
Target Start/End: Original strand, 10882572 - 10882712
Alignment:
Q  166 taaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctg 265  Q
    |||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| | |||    
T  10882572 taaccccgagtacaatcccttacacgaccgatgaaaacctagataaggtacatcggactccctcagtgtcgtgcgggtctaccttgcggagcgtgtcctg 10882671  T
Q  266 atcccctggcgagaacctctcgtatcccccttggcgtggata 307  Q
     |||||||||| |||||||| ||||||||| |||||||||||    
T  10882672 ttcccctggcgtgaacctcttgtatccccc-tggcgtggata 10882712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 315
Target Start/End: Complemental strand, 14283216 - 14283001
Alignment:
Q  97 ttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    |||| ||||| |||||| ||||||||||||  |||| | ||||  ||||||||||||  || |||||||||||||||| |||| ||||| |||| |||||    
T  14283216 ttatattagatgttagcgtgtaacaaacaa--ttatctgggttgcttttacggagtgcatcgggtggagtaaccccgaatacattcccttactt-accga 14283120  T
Q  197 tgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccc 295  Q
    ||||  | |||||||||| ||||||||||| || | || ||||| ||||||||||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  14283119 tgaattcttagctaaggtgcatcggactcctcttaatgccgtgcaggcctaccttgcggagcgtatcctgttccccttg-gagaacctctcgtatccccc 14283021  T
Q  296 ttggcgtggataacgaaaag 315  Q
    ||||||||||||||| ||||    
T  14283020 ttggcgtggataacggaaag 14283001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 296
Target Start/End: Original strand, 11169594 - 11169801
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggag--taaccccgagtacaatccctcac 188  Q
    ||||| |||||||||  |||||| |  ||||||||   |||| ||| ||||||||||||||||| || |||||||  |||||||||||||||||||  ||    
T  11169594 cattcattatgttaggggttagcgttgaacaaacatagttatcttgattcattttacggagtgtatcgggtggagagtaaccccgagtacaatcccatac 11169693  T
Q  189 ttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgt 288  Q
     ||||| ||||||||||| ||||||||||||||||||| |||||| ||||||| || |||||||||||| | | | | |||||||| | |||||||| ||    
T  11169694 atgacctatgaaaacctaactaaggtacatcggactccttcagtgtcgtgcggacccaccttgcggagcttgtcccgttcccctggtgtgaacctcttgt 11169793  T
Q  289 atccccct 296  Q
    ||||||||    
T  11169794 atccccct 11169801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 98 - 307
Target Start/End: Complemental strand, 14817523 - 14817315
Alignment:
Q  98 tatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    |||||||||| |||||| ||||||| ||||  |||| |  ||| |||||||||||||| || ||||||||||||||||||||||||||  || |||||||    
T  14817523 tatgttagaaagttagcgtgtaacatacaa--ttatctgagttgattttacggagtgtatcgggtggagtaaccccgagtacaatcccatacatgaccga 14817426  T
Q  197 tgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccc 295  Q
    ||||  |||||||||||||||||||||||| ||| ||| ||||| ||||||||||| ||||||| | | | |||||||  | |||||||| |||||||||    
T  14817425 tgaattcctagctaaggtacatcggactcctctcggtgccgtgcaggcctaccttgtggagcgtgtcccgttcccctgaggtgaacctcttgtatccccc 14817326  T
Q  296 ttggcgtggata 307  Q
     |||||||||||    
T  14817325 -tggcgtggata 14817315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 259
Target Start/End: Complemental strand, 14827304 - 14827135
Alignment:
Q  90 ccattctttatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcac 188  Q
    |||||| ||||||| ||| |||||| ||||||| ||||  |||| |  ||| |||||| ||||||  || |||||||||||||||||||||||| |  ||    
T  14827304 ccattcattatgttggaaagttagcgtgtaacatacaa--ttatctgagtttattttatggagtgcatcgggtggagtaaccccgagtacaatctcatac 14827207  T
Q  189 ttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgt 259  Q
     |||||||||||  |||||||||||||||||   |||| || | | |||||| |||||||||||||||||||    
T  14827206 atgaccgatgaattcctagctaaggtacatcaatctcctctgaattacgtgcaggcctaccttgcggagcgt 14827135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 22674684 - 22674743
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacgga 150  Q
    ||||| |||||||||| |||||| ||||||||||| |||||| ||||||| |||||||||    
T  22674684 cattcattatgttagaggttagcgtgtaacaaacagcattatcttggttcgttttacgga 22674743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 249
Target Start/End: Complemental strand, 21324120 - 21324010
Alignment:
Q  141 attttacggagtgtgtcaggtggagtaaccccgagtacaatccc-tcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtg 238  Q
    |||||||  ||||| || |||||||||||| ||||||||||||| | || | |||||||||  |||||||||||||||  ||||||| || | || ||||    
T  21324120 attttacaaagtgtatcgggtggagtaacctcgagtacaatcccgtaacataaccgatgaattcctagctaaggtacactggactcctcttaatgccgtg 21324021  T
Q  239 cgggcctacct 249  Q
    |||||||||||    
T  21324020 cgggcctacct 21324010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 296
Target Start/End: Original strand, 9345273 - 9345556
Alignment:
Q  15 tatatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatc--cattctttatgttagaagttag 112  Q
    |||||| ||||||||| |||||||||||||||||| ||||  || ||||||||||  |||||||||||||  ||||  |||||  ||||||||| |||||    
T  9345273 tatatcatcataacttattctattgcataagcttgttcttatcttgaaacatatcgtaatcatattcataatcatcttcattcaatatgttagaggttag 9345372  T
Q  113 catgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaag 212  Q
    | |   ||||| || ||||| |  |||||||||||||||||| || ||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  9345373 cgttggacaaaaaatattatctaagttcattttacggagtgtatcgggtggagtaaccccgagtacaatcccatacatgaccgatgaaaacctagctaag 9345472  T
Q  213 gtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccct 296  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| | | |  ||||||||  || ||||| ||||||||||    
T  9345473 gtacatcggactccctcagtgtcgtgcgggcctaccttgcggagcgtgtcccgtccccctggcatgaccctcttgtatccccct 9345556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 309
Target Start/End: Original strand, 26228320 - 26228449
Alignment:
Q  179 aatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgag 278  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | | |||||| | |||    
T  26228320 aatcccttacttgaccgatgaaaacctagctaaggtacatcggactccctcggtgacgtgcgggcctaccatgcggagcgtatcccgttccccttg-gag 26228418  T
Q  279 aacctctcgtatcccccttggcgtggataac 309  Q
    |||||||||||||||||||||||||||||||    
T  26228419 aacctctcgtatcccccttggcgtggataac 26228449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 91 - 307
Target Start/End: Original strand, 16262010 - 16262224
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| |||||||||| |||||  |  ||||||||  ||||| ||| ||||||||||| | ||  ||   ||||||||||||||||||||||||| || |    
T  16262010 cattcattatgttagaggttagtgttgaacaaacataattatcttgattcattttacgaaatgcatcgactggagtaaccccgagtacaatcccttacat 16262109  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtat 290  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| | | |  ||||||||| |||||||| ||||    
T  16262110 gaccgatgaaa-cctagctaaggtacatcggactccctcagtgtcgtgcgggcctaccttgcagagcgtgtcccgtccccctggcgtgaacctcttgtat 16262208  T
Q  291 cccccttggcgtggata 307  Q
     ||||||||||||||||    
T  16262209 -ccccttggcgtggata 16262224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 14733323 - 14733262
Alignment:
Q  235 cgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccct 296  Q
    ||||||||||||| |||||||||||||  ||  |||||  || |||||||||||||||||||    
T  14733323 cgtgcgggcctactttgcggagcgtatcttgtccccctaacgtgaacctctcgtatccccct 14733262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 8e-55; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 91 - 306
Target Start/End: Original strand, 22800918 - 22801134
Alignment:
Q  91 cattctttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||| || ||||||||||||||||||||||||||  ||||    
T  22800918 cattcattatgttagaagttagcgtgtaacaaacaacattatcttcattcattttacggagtgtatcgggtggagtaaccccgagtacaatcccatactt 22801017  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcg-ta 289  Q
      || ||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||| ||||||||| | |  ||||||||| |||||||| |  |    
T  22801018 tgccaatgaaaacctagcgaaggtatatcagactccctcagtgtcgtgcgggcctaccttgtggagcgtatcccgtccccctggcgtgaacctcttgaaa 22801117  T
Q  290 tcccccttggcgtggat 306  Q
    ||||||||||| |||||    
T  22801118 tcccccttggcatggat 22801134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 179 - 315
Target Start/End: Original strand, 22805791 - 22805927
Alignment:
Q  179 aatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgag 278  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||   | |||||| | |||    
T  22805791 aatcccttacttgaccgatgaaaacctagctaaagtacatcggactccctcagtgacatgcgggcctaccttgcggagcgtatcacgttccccttgtgag 22805890  T
Q  279 aacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  22805891 aacctctcgtatcccccttggcgttgataacggaaag 22805927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 19243688 - 19243816
Alignment:
Q  179 aatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgag 278  Q
    ||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||||| |||||||||||| | | |||||| | |||    
T  19243688 aatcccttacttgaccgacgaaaacctagctaaggtatatcagactccctcagtgacgtgcgagcctaccatgcggagcgtatcccgttccccttgtgag 19243787  T
Q  279 aacctctcgtatcccccttggcgtggata 307  Q
    |||||||||||||||||||||||||||||    
T  19243788 aacctctcgtatcccccttggcgtggata 19243816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 179 - 315
Target Start/End: Original strand, 21950542 - 21950678
Alignment:
Q  179 aatccctcacttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgag 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||  ||| ||| ||||||||||| ||||||||| | | |||||| | |||    
T  21950542 aatcccttacttgaccgatgaaaacctagctaaggtacatcggacttcctcaacgacttgcaggcctaccttgtggagcgtatcccgttccccttgtgag 21950641  T
Q  279 aacctctcgtatcccccttggcgtggataacgaaaag 315  Q
    |||||||||||||||||||||||||||||||| ||||    
T  21950642 aacctctcgtatcccccttggcgtggataacggaaag 21950678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 3575746 - 3575821
Alignment:
Q  187 acttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcggagcgtatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3575746 acttgaccgatgaaaacctagctaaggtacatcggactccctcagtgacgtgcgggcctaccttgcagagcgtatt 3575821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 92 - 261
Target Start/End: Original strand, 37984590 - 37984761
Alignment:
Q  92 attctttatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcactt 190  Q
    |||| ||||||||||| |||||| |||||||||||||||||| |  ||| |||| || |||||| || |||| |||||||||||||||||||| | ||||    
T  37984590 attcattatgttagaaagttagcgtgtaacaaacaacattatctgagttgatttgacagagtgtatcgggtgcagtaaccccgagtacaatcctttactt 37984689  T
Q  191 gaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgtat 261  Q
    ||||||||||  |||||||||||||||||||||||| || | || |||||||||||||||||||||||||||    
T  37984690 gaccgatgaattcctagctaaggtacatcggactcctcttaatgccgtgcgggcctaccttgcggagcgtat 37984761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 226
Target Start/End: Original strand, 29253145 - 29253351
Alignment:
Q  17 tatcttcataacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatccatccattctttatgttagaagttagcatg 116  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||||||| |||  |||||||||||||| ||| |     ||||||||||| ||||| ||    
T  29253145 tatcttcattacttgttctattgcataaacttgctcttgactcgaaacaaatcgtaatcatattcatattcattc-----ttatgttagaaattagcgtg 29253239  T
Q  117 taacaaacaacattattttggttcattttacggagt-gtgtcaggtggagtaaccccg--agtacaatccctcacttgaccgatgaaaacctagctaagg 213  Q
    ||||||| |||||||| ||||||||||||||||| |  |  |  ||||||||||||||  |||  ||||||| ||||||| |||||||||||||||||||    
T  29253240 taacaaaaaacattatcttggttcattttacggattaatcccgagtggagtaaccccggaagt-taatcccttacttgactgatgaaaacctagctaagg 29253338  T
Q  214 tacatcggactcc 226  Q
    |||||||||||||    
T  29253339 tacatcggactcc 29253351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 21231361 - 21231260
Alignment:
Q  159 ggtggagtaaccccgagtacaatccctcacttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagc 257  Q
    |||||||||||||||| ||||||||   || | |||||| ||  ||||||||| |||||||  ||||| ||||||| ||||||||||||||||| |||||    
T  21231361 ggtggagtaaccccgattacaatcctaaacataaccgattaattcctagctaaagtacatcatactcctctcagtgtcgtgcgggcctaccttgtggagc 21231262  T
Q  258 gt 259  Q
    ||    
T  21231261 gt 21231260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 22752537 - 22752597
Alignment:
Q  91 cattctttatgttaga-agttagcatgtaacaaacaacattattttggttcattttacgga 150  Q
    ||||| |||||||||| ||||||| |||||||||||||||||| ||||||| |||||||||    
T  22752537 cattcattatgttagagagttagcgtgtaacaaacaacattatcttggttcgttttacgga 22752597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 5636 - 5507
Alignment:
Q  97 ttatgttagaagttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    |||||||||| ||||   |||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||||||||| |||| |||||    
T  5636 ttatgttagaggttaatgtgtaacaaacaacattatcttggttcgttttacggagtgtatcgggtggagtaaccccgagtacaatcccttactttaccga 5537  T
Q  197 tgaaaacctagctaaggtacatcggactcc 226  Q
    ||||  |||||||||||||||| |||||||    
T  5536 tgaattcctagctaaggtacattggactcc 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 98 - 307
Target Start/End: Original strand, 22188 - 22396
Alignment:
Q  98 tatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcacttgaccga 196  Q
    |||||||||| |||||| ||||||| ||||  |||| |  ||| |||||||||||||| || ||||||||||||||||||||||||||  || |||||||    
T  22188 tatgttagaaagttagcgtgtaacatacaa--ttatctgagttgattttacggagtgtatcgggtggagtaaccccgagtacaatcccatacatgaccga 22285  T
Q  197 tgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgtattctgatcccctggcgagaacctctcgtatccccc 295  Q
    ||||  |||||||||||||||||||||||| ||| ||| ||||| ||||||||||| ||||||| | | | |||||||  | |||||||| |||||||||    
T  22286 tgaattcctagctaaggtacatcggactcctctcggtgccgtgcaggcctaccttgtggagcgtgtcccgttcccctgaggtgaacctcttgtatccccc 22385  T
Q  296 ttggcgtggata 307  Q
     |||||||||||    
T  22386 -tggcgtggata 22396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 259
Target Start/End: Original strand, 12405 - 12574
Alignment:
Q  90 ccattctttatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcac 188  Q
    |||||| ||||||| ||| |||||| ||||||| ||||  |||| |  ||| |||||| ||||||  || |||||||||||||||||||||||| |  ||    
T  12405 ccattcattatgttggaaagttagcgtgtaacatacaa--ttatctgagtttattttatggagtgcatcgggtggagtaaccccgagtacaatctcatac 12502  T
Q  189 ttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgt 259  Q
     |||||||||||  |||||||||||||||||   |||| || | | |||||| |||||||||||||||||||    
T  12503 atgaccgatgaattcctagctaaggtacatcaatctcctctgaattacgtgcaggcctaccttgcggagcgt 12574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 259
Target Start/End: Complemental strand, 24114 - 23945
Alignment:
Q  90 ccattctttatgttagaa-gttagcatgtaacaaacaacattattttggttcattttacggagtgtgtcaggtggagtaaccccgagtacaatccctcac 188  Q
    |||||| ||||||| ||| |||||| ||||||| ||||  |||| |  ||| |||||| ||||||  || |||||||||||||||||||||||| |  ||    
T  24114 ccattcattatgttggaaagttagcgtgtaacatacaa--ttatctgagtttattttatggagtgcatcgggtggagtaaccccgagtacaatctcatac 24017  T
Q  189 ttgaccgatgaaaacctagctaaggtacatcggactcc-ctcagtgacgtgcgggcctaccttgcggagcgt 259  Q
     |||||||||||  |||||||||||||||||   |||| || | | |||||| |||||||||||||||||||    
T  24016 atgaccgatgaattcctagctaaggtacatcaatctcctctgaattacgtgcaggcctaccttgcggagcgt 23945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 1343 - 1198
Alignment:
Q  25 taacttgttctattgcataagcttgatcttgactcgaaacatatcagaatcatattcatatcca--tccattctttatgttagaagttagcatgtaacaa 122  Q
    ||||||||||||||| ||||||||| ||||  || ||||||||||| |||||||||||||  ||  | ||||| |||||||||  |||||| |  |||||    
T  1343 taacttgttctattggataagcttgttcttttcttgaaacatatcataatcatattcataatcatgttcattcattatgttagcggttagcgttgaacaa 1244  T
Q  123 acaacattattttggttcattttacggagtgtgtcaggtggagtaac 169  Q
    | |  ||||| |  |||||||||||||||||| || |||||||||||    
T  1243 aaactattatctgagttcattttacggagtgtatc-ggtggagtaac 1198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University