View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19880_low_2 (Length: 367)
Name: NF19880_low_2
Description: NF19880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19880_low_2 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 278; Significance: 1e-155; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 13 - 347
Target Start/End: Original strand, 37437252 - 37437586
Alignment:
| Q |
13 |
gagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaag |
112 |
Q |
| |
|
||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37437252 |
gagatgaagtgttgagaagaaaagagtttttgaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaag |
37437351 |
T |
 |
| Q |
113 |
caacaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagagcaacttacaccgattctcnnnnnnnactttgatg |
212 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37437352 |
caacaacaacgagaacaagtgaagggcaaaacaaggcaaaagaataaaaaaggaccccatttagagcaacttacaccgattctctttttttactttgatg |
37437451 |
T |
 |
| Q |
213 |
atttaggatataccaaatgattagcctctatttatataggaaacataacctgaaactaaggggcaaggaccaaaaagtctgacttattagattgtttaca |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37437452 |
atttaggatataccaaatgattagcctctatttatataggaaacataacttgaaactaaggggcaaggaccaaaaagtctgacttattagattgtttaca |
37437551 |
T |
 |
| Q |
313 |
aattcagtctagctattcccttattttaatgtggg |
347 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |
|
|
| T |
37437552 |
aattcagtctagctattcccttgttttaatgtggg |
37437586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 196
Target Start/End: Original strand, 37698344 - 37698527
Alignment:
| Q |
13 |
gagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaag |
112 |
Q |
| |
|
|||| |||||||| || ||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||| |||| || |||||| |||||||| |
|
|
| T |
37698344 |
gagacgaagtgttaactgaaaatgagtttttgaattgtaacaaggcagaactgtcatgatggttgcataatgagagtgtgtaggaagtaaaatgagtaag |
37698443 |
T |
 |
| Q |
113 |
caacaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagagcaacttacaccgattctc |
196 |
Q |
| |
|
|||||||||| |||| ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37698444 |
caacaacaacaagaaaaagtgaaaggcaaaataaggcaatagaataaaaaaggaccccatttagagcaacttacaccgattctc |
37698527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 37713175 - 37713350
Alignment:
| Q |
13 |
gagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaag |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| | |||||| | |||||||||||||| |||||| |||||||| |
|
|
| T |
37713175 |
gagatgaagtgttgacagaaaaagagtttttgaattgtaacaaggcagagttgtcatgtttgttgcacagtgagaaagtgtgggaagtaaaatgagtaag |
37713274 |
T |
 |
| Q |
113 |
caacaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagagcaacttacac |
188 |
Q |
| |
|
||||||||||||||| ||||||| || |||||||||||| ||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
37713275 |
caacaacaacgagaagaagtgaaaggtaaaataaggcaatggaataaaaaaggatcccatttagagaaacttacac |
37713350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 206 - 339
Target Start/End: Original strand, 37704379 - 37704512
Alignment:
| Q |
206 |
tttgatgatttaggatataccaaatgattagcctctatttatataggaaacataacctgaaactaaggggcaaggaccaaaaagtctgacttattagatt |
305 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
37704379 |
tttgatgatttaggatataccaattgattagcctctatttatataggaaacataacctgaaactaaggggcaaggaccaaaaaggttgacttattagatt |
37704478 |
T |
 |
| Q |
306 |
gtttacaaattcagtctagctattcccttatttt |
339 |
Q |
| |
|
|||| |||||| |||||| |||||||||||||| |
|
|
| T |
37704479 |
gtttgcaaattgagtctacgtattcccttatttt |
37704512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 37641433 - 37641604
Alignment:
| Q |
14 |
agatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaagc |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| | ||||||||||| || |||||| ||||||| | |
|
|
| T |
37641433 |
agatgaagtgttgacagaaaaagagtttttgaattgtaacaaggcagaggtgtcatgttggttgcacagtgagaaagtgtaggaagtaaaatgagtaatc |
37641532 |
T |
 |
| Q |
114 |
aacaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagagcaactta |
185 |
Q |
| |
|
||||||||| | || ||||||| || |||||||||||| ||||||||||||| ||||||||||| |||||| |
|
|
| T |
37641533 |
aacaacaacaacaagaagtgaaaggtaaaataaggcaatggaataaaaaaggatcccatttagagaaactta |
37641604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 37534651 - 37534826
Alignment:
| Q |
13 |
gagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaag |
112 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||||||| | |||||| | ||||||||||| || |||||| ||||||| |
|
|
| T |
37534651 |
gagatgaagtgctgacagaaaaagagtttttgaattgtaacaaggcagagttgtcatgtttgttgcacagtgagaaagtgtaggaagtaaaatgagtaat |
37534750 |
T |
 |
| Q |
113 |
caacaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagagcaacttacac |
188 |
Q |
| |
|
|||||||||| |||| ||||||| || |||||||||||| ||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
37534751 |
caacaacaacaagaaaaagtgaaaggtaaaataaggcaatggaataaaaaaggatcccatttagagaaacttacac |
37534826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 216 - 339
Target Start/End: Original strand, 37698571 - 37698694
Alignment:
| Q |
216 |
taggatataccaaatgattagcctctatttatataggaaacataacctgaaactaaggggcaaggaccaaaaagtctgacttattagattgtttacaaat |
315 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37698571 |
taggatataccaattgattagcctctatttatataggaaacataacctgaaactacggggaaaggaccaaaaagtttgacttattagattgtttacaaat |
37698670 |
T |
 |
| Q |
316 |
tcagtctagctattcccttatttt |
339 |
Q |
| |
|
| |||||| |||||||||||||| |
|
|
| T |
37698671 |
tgagtctaagtattcccttatttt |
37698694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 13 - 178
Target Start/End: Original strand, 37595881 - 37596049
Alignment:
| Q |
13 |
gagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagta-- |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| | |||||| ||||||||||||| || |||||| |||||| |
|
|
| T |
37595881 |
gagatgaagtgttgacagaaaaagagtttttgaattgtaacaaggcagagttgtcatgtttgttgcacaatgagaaagtgtaggaagtaaaatgagtaag |
37595980 |
T |
 |
| Q |
111 |
-agcaacaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagag |
178 |
Q |
| |
|
|||||||||||| |||| ||||||| || |||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
37595981 |
cagcaacaacaacaagaaaaagtgaaaggtaaaataaggcaatggaataaaaaaggatcccatttagag |
37596049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 37391548 - 37391375
Alignment:
| Q |
15 |
gatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaagca |
114 |
Q |
| |
|
||||||||||||||| |||| |||||||| ||||||| ||||||||| | |||||| ||||||| ||||||| ||| | || |||||| |||||||||| |
|
|
| T |
37391548 |
gatgaagtgttgacaaaaaatgagtttttgaattgtagcaaggcagagctatcatgaaggttgcacaatgagagagtataggaagtaaaatgagtaagca |
37391449 |
T |
 |
| Q |
115 |
acaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagagcaacttacac |
188 |
Q |
| |
|
|||||||| ||||||||||| || |||||||||||| | |||||| ||||||||||||||||||||||||||| |
|
|
| T |
37391448 |
acaacaacatgaacaagtgaaaggtaaaataaggcaataaaataaacaaggaccccatttagagcaacttacac |
37391375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 37704220 - 37704380
Alignment:
| Q |
14 |
agatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaagc |
113 |
Q |
| |
|
||||||||||||||||||||| |||| ||| |||||||| ||||| ||| | ||||| ||| |||| ||||||||||||| || |||||| ||||||||| |
|
|
| T |
37704220 |
agatgaagtgttgacagaaaatgagtgtttgaattgtaacaaggcggagctatcatgttggctgcacaatgagaaagtgtaggaagtaaaatgagtaagc |
37704319 |
T |
 |
| Q |
114 |
aacaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccattt |
174 |
Q |
| |
|
| ||| ||| |||||||||||| | |||||||||||| |||||||||||||||| ||||| |
|
|
| T |
37704320 |
agcaataacaagaacaagtgaaaagtaaaataaggcaatagaataaaaaaggaccgcattt |
37704380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 37380930 - 37380810
Alignment:
| Q |
15 |
gatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaagca |
114 |
Q |
| |
|
||||||||||||| |||||| |||||||| || ||||| |||||||| || ||||| |||||||| |||||||||||||||| |||||| |||||||||| |
|
|
| T |
37380930 |
gatgaagtgttgaaagaaaatgagtttttgaaatgtaacaaggcagatgtatcatgttggttgcacaatgagaaagtgtgggaagtaaaatgagtaagca |
37380831 |
T |
 |
| Q |
115 |
acaacaacgagaacaagtgaa |
135 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
37380830 |
acaacaacaagaacaagtgaa |
37380810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 37825465 - 37825582
Alignment:
| Q |
14 |
agatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaagc |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| | |||||| | ||||||||||| || |||||| ||||||| | |
|
|
| T |
37825465 |
agatgaagtgttgacagaaaaagagtttttgaattgtaacaaggcagagttgtcatgtttgttgcacagtgagaaagtgtaggaagtaaaatgagtaatc |
37825564 |
T |
 |
| Q |
114 |
aacaacaacgagaacaag |
131 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
37825565 |
aacaacaacaagaacaag |
37825582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 37441499 - 37441669
Alignment:
| Q |
15 |
gatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaagca |
114 |
Q |
| |
|
|||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| | ||| || | ||||||||| | || |||||| |||||||||| |
|
|
| T |
37441499 |
gatgaagtgttgactgaaa--gagtttttgaattgtaacaaggcagaggtgtcatgtttgtttcacagtgagaaagtataggaagtaaaatgagtaagca |
37441596 |
T |
 |
| Q |
115 |
acaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagagcaacttacac |
188 |
Q |
| |
|
|||||| |||||| ||||| || |||||||||||| | |||||||||||| ||||||||||| |||||||| |
|
|
| T |
37441597 |
gcaacaagaagaacatgtgaaaggtaaaataaggcaataaaataaaaaagga-cccatttagagatacttacac |
37441669 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 37399410 - 37399290
Alignment:
| Q |
15 |
gatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaagca |
114 |
Q |
| |
|
|||||||||| ||| |||| || ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||| || |
|
|
| T |
37399410 |
gatgaagtgtcaacaaaaaatgaatttttgaattgtaacaaggcagaggtgtcatgatggttgcatagtgagaaagtgtatgaagtaaaatgagtaatca |
37399311 |
T |
 |
| Q |
115 |
acaacaacgagaacaagtgaa |
135 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
37399310 |
acaacaacaagaacaagtgaa |
37399290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 185
Target Start/End: Complemental strand, 37411883 - 37411743
Alignment:
| Q |
45 |
aattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaagcaacaacaacgagaacaagtgaagggaaaaat |
144 |
Q |
| |
|
|||||||| |||||| || ||||||||| ||||||||||||||| |||| || |||||| ||||||| || || |||| |||||||||||| || ||||| |
|
|
| T |
37411883 |
aattgtaacaaggcaaagctgtcatgatagttgcataatgagaaggtgtaggaagtaaaatgagtaaacagcagcaacaagaacaagtgaaaggtaaaat |
37411784 |
T |
 |
| Q |
145 |
aaggcaagagaataaaaaaggaccccatttagagcaactta |
185 |
Q |
| |
|
| | ||| |||| |||| ||||||||||||||||||||||| |
|
|
| T |
37411783 |
aggacaatagaacaaaacaggaccccatttagagcaactta |
37411743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 178
Target Start/End: Original strand, 37430308 - 37430473
Alignment:
| Q |
13 |
gagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaag |
112 |
Q |
| |
|
||||||||||||||| | |||| || || || |||||||| |||||||| |||||||||| ||||| | ||| || || | || |||||| |||| || |
|
|
| T |
37430308 |
gagatgaagtgttgataaaaaatgaattcttgaattgtaacaaggcagaactgtcatgatgcttgcacattgaaaatgtataggaagtaaaaagagttag |
37430407 |
T |
 |
| Q |
113 |
caacaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagag |
178 |
Q |
| |
|
|| || |||| |||||||||||| || || |||||| || |||| | ||||||||||||||||||| |
|
|
| T |
37430408 |
cagcatcaacaagaacaagtgaaaggcaagataaggaaatagaaaacaaaaggaccccatttagag |
37430473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 37698974 - 37699033
Alignment:
| Q |
282 |
ccaaaaagtctgacttattagattgtttacaa--attcagtctagctattcccttatttt |
339 |
Q |
| |
|
||||||||| ||| |||||||||||||||||| ||| ||||||| |||||||||||||| |
|
|
| T |
37698974 |
ccaaaaagtttgagttattagattgtttacaaacattgagtctaggtattcccttatttt |
37699033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 16841488 - 16841305
Alignment:
| Q |
13 |
gagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaag |
112 |
Q |
| |
|
|||||||||||||||||||||| |||||||| || ||||| || |||||| ||||||| |||||||| ||||| |||||||| | ||||||||||||||| |
|
|
| T |
16841488 |
gagatgaagtgttgacagaaaatgagtttttgaaatgtaacaaagcagagctgtcatgttggttgcagaatgacaaagtgtgtgaagtaaagtgagtaag |
16841389 |
T |
 |
| Q |
113 |
caacaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagagcaacttacaccgattctc |
196 |
Q |
| |
|
|| || || ||||||||||||||| |||| ||||||| | |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
16841388 |
cagcagcacaaagaacaagtgaagggcaaaacaaggcaaaacaataaaaaaggaccccatttagagcaacttactccgattctc |
16841305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 24216345 - 24216181
Alignment:
| Q |
14 |
agatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaagc |
113 |
Q |
| |
|
|||||||||||||||| ||| ||||| || |||||||| || ||||| |||||||||||||||| |||||| |||||| | |||||| ||||||||| |
|
|
| T |
24216345 |
agatgaagtgttgacaacaaatgagttcttgaattgtaacaatgcagaactgtcatgatggttgcagaatgagtaagtgtaagaagtaaaatgagtaagc |
24216246 |
T |
 |
| Q |
114 |
aacaacaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagag |
178 |
Q |
| |
|
||||||||| ||||||||||| || |||| ||||| |||||||||||||| ||||| ||||| |
|
|
| T |
24216245 |
aacaacaacatgaacaagtgaaaggtcaaatgaggcattagaataaaaaaggaacccatatagag |
24216181 |
T |
 |
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Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 16841274 - 16841203
Alignment:
| Q |
204 |
actttgatgatttaggatataccaaatgattagcctc---tatttatataggaaacataacctgaaactaag |
272 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16841274 |
actttgatgatttacgatataccaactgattagcctcctctatttatataggaaacataacctgaaactaag |
16841203 |
T |
 |
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Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 188
Target Start/End: Original strand, 14554615 - 14554782
Alignment:
| Q |
18 |
gaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaagtgagtaagcaaca |
117 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||| | || |||||| ||||||||||||| |
|
|
| T |
14554615 |
gaagtgttgacagaaaaagagtttttgaattgtaacaaggcagaggtgtcatgttggttgcacaatgagaaagtataggaagtaaaatgagtaagcaaca |
14554714 |
T |
 |
| Q |
118 |
acaacgagaacaagtgaagggaaaaataaggcaagagaataaaaaaggaccccatttagagcaacttacac |
188 |
Q |
| |
|
| | |||| ||||||| || |||||||||||| |||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
14554715 |
ata---agaaaaagtgaaaggtaaaataaggcaatagaataaaaaaggatcccatttagagaaacttacac |
14554782 |
T |
 |
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