View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19881_high_3 (Length: 365)

Name: NF19881_high_3
Description: NF19881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19881_high_3
NF19881_high_3
[»] scaffold0336 (3 HSPs)
scaffold0336 (18-177)||(1967-2125)
scaffold0336 (274-348)||(2250-2324)
scaffold0336 (156-216)||(2159-2219)
[»] chr3 (97 HSPs)
chr3 (18-177)||(29656820-29656979)
chr3 (18-177)||(29671464-29671623)
chr3 (18-177)||(5709015-5709175)
chr3 (18-177)||(5719925-5720085)
chr3 (18-177)||(5730828-5730988)
chr3 (18-177)||(5761380-5761540)
chr3 (156-276)||(29656666-29656786)
chr3 (156-276)||(29671310-29671430)
chr3 (158-348)||(5709211-5709404)
chr3 (158-348)||(5720121-5720314)
chr3 (158-348)||(5731024-5731217)
chr3 (158-348)||(5761151-5761344)
chr3 (157-348)||(6226185-6226380)
chr3 (159-348)||(18218992-18219176)
chr3 (159-348)||(18234300-18234484)
chr3 (157-348)||(22491025-22491220)
chr3 (157-348)||(8220739-8220935)
chr3 (18-177)||(17903090-17903249)
chr3 (157-348)||(8205570-8205766)
chr3 (159-348)||(17975670-17975855)
chr3 (159-348)||(17991218-17991403)
chr3 (76-177)||(43716346-43716447)
chr3 (18-177)||(22120059-22120218)
chr3 (18-177)||(26684147-26684306)
chr3 (159-348)||(16401428-16401614)
chr3 (159-348)||(18217580-18217766)
chr3 (159-348)||(18251783-18251969)
chr3 (159-348)||(24321928-24322114)
chr3 (159-348)||(24337280-24337466)
chr3 (82-177)||(18218859-18218955)
chr3 (82-177)||(18234167-18234263)
chr3 (82-177)||(24321795-24321891)
chr3 (82-177)||(24337147-24337243)
chr3 (82-177)||(6210837-6210932)
chr3 (82-177)||(18324411-18324506)
chr3 (82-177)||(18339508-18339603)
chr3 (76-177)||(22490888-22490990)
chr3 (234-348)||(5600374-5600486)
chr3 (234-348)||(5615615-5615727)
chr3 (82-177)||(6226047-6226143)
chr3 (82-177)||(16401650-16401746)
chr3 (82-177)||(17975892-17975988)
chr3 (82-177)||(17991440-17991536)
chr3 (86-177)||(18217450-18217542)
chr3 (86-177)||(18251653-18251745)
chr3 (234-348)||(50140337-50140449)
chr3 (82-177)||(4715389-4715484)
chr3 (82-177)||(4730569-4730664)
chr3 (82-177)||(6186067-6186162)
chr3 (27-175)||(16601486-16601635)
chr3 (18-175)||(29139896-29140052)
chr3 (18-175)||(29154701-29154857)
chr3 (18-175)||(28107211-28107366)
chr3 (18-175)||(28122447-28122602)
chr3 (85-177)||(8205442-8205535)
chr3 (85-177)||(8220611-8220704)
chr3 (234-348)||(28348252-28348365)
chr3 (234-348)||(28107005-28107116)
chr3 (234-348)||(28122241-28122352)
chr3 (161-253)||(22119924-22120020)
chr3 (161-253)||(26684345-26684441)
chr3 (234-348)||(28333150-28333263)
chr3 (18-175)||(10387647-10387802)
chr3 (18-175)||(10405021-10405176)
chr3 (161-253)||(17903288-17903384)
chr3 (161-253)||(43716478-43716574)
chr3 (18-175)||(47197618-47197775)
chr3 (234-308)||(29139723-29139797)
chr3 (234-308)||(29154528-29154602)
chr3 (18-175)||(7067021-7067179)
chr3 (18-175)||(7081973-7082131)
chr3 (287-348)||(10387899-10387961)
chr3 (287-348)||(10405273-10405335)
chr3 (299-348)||(26427085-26427134)
chr3 (59-175)||(50140544-50140659)
chr3 (18-175)||(18283546-18283705)
chr3 (225-348)||(26680818-26680941)
chr3 (59-175)||(5600581-5600696)
chr3 (302-348)||(5007616-5007662)
chr3 (302-348)||(5022875-5022921)
chr3 (18-175)||(18298847-18299006)
chr3 (18-175)||(18314148-18314307)
chr3 (28-175)||(26426797-26426942)
chr3 (59-175)||(5615822-5615937)
chr3 (161-261)||(6186199-6186291)
chr3 (161-261)||(6210969-6211061)
chr3 (299-348)||(51776108-51776157)
chr3 (299-348)||(51791194-51791243)
chr3 (193-261)||(4715545-4715613)
chr3 (161-261)||(4730701-4730793)
chr3 (161-261)||(18324543-18324635)
chr3 (161-261)||(18339640-18339732)
chr3 (194-253)||(4410755-4410814)
chr3 (194-253)||(4426135-4426194)
chr3 (273-348)||(43716585-43716659)
chr3 (83-175)||(28332964-28333055)
chr3 (83-175)||(28348066-28348157)
[»] chr7 (48 HSPs)
chr7 (18-177)||(26499247-26499404)
chr7 (156-348)||(26521884-26522073)
chr7 (18-177)||(26598625-26598782)
chr7 (18-177)||(4136456-4136614)
chr7 (18-177)||(4151382-4151540)
chr7 (18-177)||(26521692-26521851)
chr7 (156-348)||(26499021-26499213)
chr7 (156-348)||(26598816-26599008)
chr7 (159-348)||(26689720-26689903)
chr7 (76-177)||(5138394-5138495)
chr7 (76-177)||(5151667-5151768)
chr7 (159-348)||(26660849-26661032)
chr7 (159-348)||(26676042-26676225)
chr7 (18-177)||(23832797-23832956)
chr7 (18-177)||(39352031-39352190)
chr7 (161-348)||(5138173-5138363)
chr7 (161-348)||(5151446-5151636)
chr7 (274-348)||(4136257-4136331)
chr7 (274-348)||(4151183-4151257)
chr7 (18-175)||(4273234-4273390)
chr7 (18-175)||(16160776-16160932)
chr7 (82-177)||(26661068-26661164)
chr7 (82-177)||(26676261-26676357)
chr7 (82-177)||(26687295-26687391)
chr7 (82-177)||(26689939-26690035)
chr7 (234-348)||(31118917-31119029)
chr7 (234-348)||(31133092-31133204)
chr7 (234-348)||(32999398-32999509)
chr7 (219-348)||(26686179-26686305)
chr7 (162-253)||(23832662-23832757)
chr7 (83-177)||(36880804-36880898)
chr7 (18-175)||(11028126-11028280)
chr7 (18-175)||(32999604-32999759)
chr7 (161-253)||(39351896-39351992)
chr7 (156-216)||(4136362-4136422)
chr7 (156-216)||(4151288-4151348)
chr7 (234-308)||(17241586-17241659)
chr7 (159-216)||(26687427-26687484)
chr7 (287-348)||(4273519-4273580)
chr7 (287-348)||(11027971-11028032)
chr7 (59-175)||(17241387-17241503)
chr7 (59-175)||(31118707-31118822)
chr7 (59-175)||(31132882-31132997)
chr7 (303-348)||(26265788-26265833)
chr7 (303-348)||(26325820-26325865)
chr7 (299-348)||(26696034-26696083)
chr7 (193-255)||(36880679-36880741)
chr7 (83-175)||(1592527-1592619)
[»] chr5 (93 HSPs)
chr5 (156-348)||(24675171-24675360)
chr5 (156-348)||(24717698-24717887)
chr5 (156-348)||(24733158-24733347)
chr5 (18-177)||(6868059-6868217)
chr5 (18-177)||(6883183-6883341)
chr5 (18-177)||(24674979-24675138)
chr5 (18-177)||(24717506-24717665)
chr5 (18-177)||(24732966-24733125)
chr5 (157-348)||(28912143-28912334)
chr5 (157-348)||(28927411-28927602)
chr5 (159-348)||(30143572-30143755)
chr5 (159-348)||(30177622-30177805)
chr5 (159-348)||(33510216-33510401)
chr5 (159-348)||(33525479-33525664)
chr5 (18-177)||(26771901-26772059)
chr5 (18-177)||(27282140-27282298)
chr5 (18-177)||(15649871-15650030)
chr5 (18-177)||(15665247-15665406)
chr5 (18-175)||(43071903-43072059)
chr5 (18-175)||(43087190-43087346)
chr5 (76-177)||(28572205-28572306)
chr5 (157-348)||(42136685-42136879)
chr5 (76-177)||(42136548-42136650)
chr5 (82-177)||(33510083-33510179)
chr5 (82-177)||(33525346-33525442)
chr5 (82-177)||(22990311-22990406)
chr5 (82-177)||(23005308-23005403)
chr5 (274-348)||(6868342-6868416)
chr5 (274-348)||(6883466-6883540)
chr5 (76-177)||(28912008-28912110)
chr5 (76-177)||(28927276-28927378)
chr5 (256-348)||(24786384-24786477)
chr5 (274-348)||(5632004-5632078)
chr5 (274-348)||(5646878-5646952)
chr5 (18-175)||(42065716-42065872)
chr5 (234-348)||(13315637-13315751)
chr5 (234-348)||(13330964-13331078)
chr5 (256-348)||(13433511-13433604)
chr5 (256-348)||(13444405-13444498)
chr5 (234-348)||(31425325-31425439)
chr5 (234-348)||(31440663-31440777)
chr5 (82-177)||(30143440-30143536)
chr5 (82-177)||(30177490-30177586)
chr5 (234-348)||(32587190-32587301)
chr5 (234-348)||(32605619-32605730)
chr5 (161-337)||(15649668-15649839)
chr5 (161-337)||(15665044-15665215)
chr5 (18-175)||(29893166-29893322)
chr5 (161-348)||(28572337-28572521)
chr5 (18-175)||(32605825-32605980)
chr5 (83-177)||(22443970-22444064)
chr5 (18-175)||(37725724-37725878)
chr5 (234-308)||(42065543-42065617)
chr5 (156-216)||(6868251-6868311)
chr5 (156-216)||(6883375-6883435)
chr5 (18-175)||(32587396-32587551)
chr5 (234-308)||(12056795-12056869)
chr5 (234-308)||(26772195-26772269)
chr5 (234-308)||(27282434-27282508)
chr5 (287-348)||(28643067-28643129)
chr5 (287-348)||(28658472-28658534)
chr5 (234-302)||(2504875-2504943)
chr5 (234-302)||(2520195-2520263)
chr5 (59-175)||(5631794-5631909)
chr5 (59-175)||(5646668-5646783)
chr5 (28-175)||(12056952-12057098)
chr5 (234-308)||(29892993-29893067)
chr5 (287-348)||(37725973-37726034)
chr5 (299-348)||(29973224-29973273)
chr5 (299-348)||(30023370-30023419)
chr5 (299-348)||(30038634-30038683)
chr5 (234-302)||(37662384-37662453)
chr5 (234-302)||(37677667-37677736)
chr5 (193-261)||(22990182-22990250)
chr5 (193-261)||(23005179-23005247)
chr5 (299-348)||(3783513-3783562)
chr5 (299-348)||(3798868-3798917)
chr5 (18-50)||(2504625-2504657)
chr5 (18-50)||(2519945-2519977)
chr5 (18-50)||(13315969-13316001)
chr5 (18-50)||(13331296-13331328)
chr5 (18-50)||(31425075-31425107)
chr5 (18-50)||(31440413-31440445)
chr5 (193-253)||(33873247-33873307)
chr5 (193-253)||(33884150-33884210)
chr5 (18-50)||(37662671-37662703)
chr5 (18-50)||(37677954-37677986)
chr5 (75-117)||(30145719-30145761)
chr5 (75-117)||(30160930-30160972)
chr5 (193-250)||(30145877-30145934)
chr5 (193-250)||(30161088-30161145)
chr5 (83-175)||(33873093-33873185)
chr5 (83-175)||(33883996-33884088)
[»] chr2 (80 HSPs)
chr2 (18-177)||(251717-251874)
chr2 (156-348)||(12707534-12707723)
chr2 (156-348)||(12722934-12723123)
chr2 (18-177)||(267247-267404)
chr2 (18-177)||(12707756-12707915)
chr2 (18-177)||(12723156-12723315)
chr2 (157-348)||(37942837-37943030)
chr2 (157-348)||(37368951-37369144)
chr2 (157-348)||(37386785-37386978)
chr2 (18-177)||(16159429-16159589)
chr2 (18-177)||(16170330-16170490)
chr2 (18-177)||(27797435-27797595)
chr2 (18-177)||(27812524-27812684)
chr2 (156-348)||(251490-251683)
chr2 (156-348)||(267020-267213)
chr2 (158-348)||(16159625-16159818)
chr2 (158-348)||(16170526-16170719)
chr2 (158-348)||(5799514-5799707)
chr2 (234-348)||(16963163-16963277)
chr2 (158-348)||(27797631-27797824)
chr2 (158-348)||(27812720-27812913)
chr2 (157-348)||(39042832-39043026)
chr2 (157-348)||(39058166-39058360)
chr2 (18-177)||(5799319-5799478)
chr2 (159-348)||(32043644-32043829)
chr2 (159-348)||(32058840-32059025)
chr2 (159-348)||(16820310-16820495)
chr2 (18-177)||(34272991-34273150)
chr2 (18-177)||(34299998-34300157)
chr2 (18-177)||(15707549-15707712)
chr2 (18-175)||(34184304-34184460)
chr2 (82-177)||(4729141-4729236)
chr2 (76-177)||(37943065-37943167)
chr2 (82-177)||(16820532-16820628)
chr2 (82-177)||(16875685-16875781)
chr2 (82-177)||(32043511-32043607)
chr2 (82-177)||(32058707-32058803)
chr2 (82-177)||(28273858-28273953)
chr2 (256-348)||(34801991-34802084)
chr2 (234-348)||(22919154-22919266)
chr2 (234-348)||(22932264-22932376)
chr2 (82-177)||(37368815-37368911)
chr2 (82-177)||(37386649-37386745)
chr2 (18-175)||(25910719-25910876)
chr2 (161-337)||(34273182-34273352)
chr2 (76-177)||(39043059-39043161)
chr2 (76-177)||(39058393-39058495)
chr2 (18-175)||(34152983-34153140)
chr2 (18-175)||(34163839-34163996)
chr2 (18-175)||(13820263-13820419)
chr2 (234-348)||(34280884-34280997)
chr2 (161-337)||(34300189-34300359)
chr2 (18-175)||(27114450-27114607)
chr2 (18-175)||(27125415-27125572)
chr2 (159-216)||(16875591-16875648)
chr2 (18-175)||(35762565-35762723)
chr2 (161-253)||(15707421-15707517)
chr2 (83-177)||(37677062-37677156)
chr2 (83-177)||(37692327-37692421)
chr2 (83-177)||(37707591-37707685)
chr2 (234-308)||(35762806-35762879)
chr2 (234-302)||(13820096-13820164)
chr2 (59-175)||(22919361-22919476)
chr2 (59-175)||(22932471-22932586)
chr2 (18-175)||(16963370-16963525)
chr2 (302-348)||(19407489-19407535)
chr2 (302-348)||(19422489-19422535)
chr2 (162-253)||(37676929-37677024)
chr2 (162-253)||(37692194-37692289)
chr2 (162-253)||(37707458-37707553)
chr2 (161-261)||(4729012-4729104)
chr2 (309-348)||(16875532-16875571)
chr2 (161-260)||(28273990-28274081)
chr2 (299-348)||(13927592-13927641)
chr2 (299-348)||(13942788-13942837)
chr2 (18-50)||(34280635-34280667)
chr2 (75-117)||(31869971-31870013)
chr2 (75-117)||(31885164-31885206)
chr2 (193-250)||(31870129-31870186)
chr2 (193-250)||(31885322-31885379)
[»] chr6 (68 HSPs)
chr6 (27-177)||(4518981-4519131)
chr6 (27-177)||(4534168-4534318)
chr6 (156-348)||(29566748-29566937)
chr6 (156-348)||(29582155-29582344)
chr6 (18-177)||(29566556-29566715)
chr6 (18-177)||(29581963-29582122)
chr6 (157-348)||(34455311-34455504)
chr6 (157-348)||(34469599-34469792)
chr6 (18-177)||(34455539-34455698)
chr6 (18-177)||(34469827-34469986)
chr6 (159-348)||(7986420-7986605)
chr6 (159-348)||(30564193-30564378)
chr6 (159-348)||(30548929-30549115)
chr6 (76-177)||(2651331-2651432)
chr6 (18-175)||(27038049-27038206)
chr6 (76-177)||(29543142-29543243)
chr6 (76-177)||(29558552-29558653)
chr6 (76-177)||(31544346-31544447)
chr6 (18-175)||(27066389-27066546)
chr6 (159-276)||(29495140-29495253)
chr6 (159-276)||(29510478-29510591)
chr6 (82-177)||(30549152-30549247)
chr6 (267-348)||(4519250-4519331)
chr6 (267-348)||(4534437-4534518)
chr6 (82-177)||(18938823-18938918)
chr6 (82-177)||(30977166-30977261)
chr6 (82-177)||(7986287-7986383)
chr6 (82-177)||(30564415-30564511)
chr6 (82-177)||(18938289-18938384)
chr6 (18-175)||(16996578-16996734)
chr6 (18-175)||(27211697-27211853)
chr6 (18-175)||(27237375-27237531)
chr6 (18-175)||(27308703-27308859)
chr6 (86-177)||(29495011-29495103)
chr6 (86-177)||(29510349-29510441)
chr6 (234-348)||(27017106-27017219)
chr6 (234-348)||(27001599-27001713)
chr6 (161-348)||(29543274-29543454)
chr6 (161-348)||(29558684-29558864)
chr6 (161-348)||(31544478-31544658)
chr6 (161-253)||(2651204-2651300)
chr6 (18-175)||(4452444-4452599)
chr6 (234-308)||(27211952-27212026)
chr6 (234-308)||(27237202-27237276)
chr6 (234-308)||(27308530-27308604)
chr6 (18-175)||(28978586-28978741)
chr6 (156-216)||(4519165-4519225)
chr6 (156-216)||(4534352-4534412)
chr6 (234-302)||(16996833-16996901)
chr6 (234-302)||(26782968-26783036)
chr6 (234-302)||(26794940-26795008)
chr6 (234-302)||(27478957-27479025)
chr6 (234-302)||(27494211-27494279)
chr6 (302-348)||(27620261-27620307)
chr6 (302-348)||(27635871-27635917)
chr6 (299-348)||(26107384-26107433)
chr6 (299-348)||(26122616-26122665)
chr6 (83-175)||(27001413-27001504)
chr6 (83-175)||(27016920-27017011)
chr6 (18-50)||(5245694-5245726)
chr6 (193-253)||(13515318-13515378)
chr6 (193-253)||(13526221-13526281)
chr6 (18-50)||(27478707-27478739)
chr6 (18-50)||(27493961-27493993)
chr6 (273-348)||(2651119-2651193)
chr6 (83-175)||(13515440-13515532)
chr6 (83-175)||(13526343-13526435)
chr6 (161-190)||(30977100-30977129)
[»] chr4 (47 HSPs)
chr4 (18-177)||(14728086-14728243)
chr4 (156-348)||(14728277-14728469)
chr4 (157-348)||(19367046-19367240)
chr4 (157-348)||(54842508-54842700)
chr4 (76-177)||(20329609-20329710)
chr4 (159-348)||(21963551-21963736)
chr4 (159-348)||(21978801-21978986)
chr4 (18-177)||(34195538-34195696)
chr4 (76-177)||(43150153-43150254)
chr4 (159-348)||(33664762-33664947)
chr4 (159-348)||(33683574-33683759)
chr4 (18-175)||(18791776-18791932)
chr4 (18-175)||(18806404-18806560)
chr4 (159-348)||(30747577-30747763)
chr4 (159-348)||(30762882-30763068)
chr4 (157-348)||(54827290-54827473)
chr4 (82-177)||(21963418-21963514)
chr4 (82-177)||(21978668-21978764)
chr4 (157-348)||(763073-763259)
chr4 (76-177)||(19366909-19367011)
chr4 (18-175)||(39845940-39846096)
chr4 (76-177)||(54827155-54827257)
chr4 (76-177)||(54842373-54842475)
chr4 (82-177)||(30747445-30747541)
chr4 (82-177)||(30762750-30762846)
chr4 (82-177)||(33683795-33683891)
chr4 (82-176)||(33664984-33665079)
chr4 (18-175)||(39859550-39859707)
chr4 (104-177)||(20336638-20336711)
chr4 (82-177)||(763301-763397)
chr4 (76-142)||(20336713-20336779)
chr4 (18-175)||(34180210-34180367)
chr4 (18-175)||(40566139-40566296)
chr4 (161-348)||(43150285-43150465)
chr4 (18-175)||(36321474-36321632)
chr4 (18-175)||(36335683-36335841)
chr4 (234-308)||(34195328-34195402)
chr4 (234-308)||(36321317-36321391)
chr4 (234-308)||(36335526-36335600)
chr4 (234-308)||(36350616-36350690)
chr4 (299-348)||(20329420-20329469)
chr4 (299-348)||(20336449-20336498)
chr4 (18-175)||(36350773-36350931)
chr4 (18-175)||(14750660-14750819)
chr4 (18-175)||(14769763-14769922)
chr4 (299-348)||(4565517-4565566)
chr4 (18-50)||(9481233-9481265)
[»] chr1 (24 HSPs)
chr1 (159-351)||(36506940-36507127)
chr1 (157-348)||(16671153-16671344)
chr1 (157-348)||(30728303-30728497)
chr1 (159-348)||(10971738-10971923)
chr1 (159-348)||(10937322-10937506)
chr1 (159-348)||(10956513-10956697)
chr1 (159-348)||(47200761-47200946)
chr1 (76-177)||(16671018-16671120)
chr1 (82-177)||(10971606-10971702)
chr1 (82-177)||(47200628-47200724)
chr1 (76-177)||(30728532-30728634)
chr1 (234-348)||(14893585-14893697)
chr1 (26-175)||(47766222-47766371)
chr1 (82-128)||(10933809-10933855)
chr1 (59-175)||(14893375-14893490)
chr1 (234-348)||(47766454-47766567)
chr1 (310-348)||(41784332-41784370)
chr1 (310-348)||(41799600-41799638)
chr1 (299-348)||(13768128-13768177)
chr1 (137-177)||(10937246-10937286)
chr1 (137-177)||(10956437-10956477)
chr1 (18-50)||(28578655-28578687)
chr1 (18-50)||(28594081-28594113)
chr1 (137-177)||(36506864-36506904)
[»] chr8 (38 HSPs)
chr8 (18-177)||(19199607-19199766)
chr8 (18-177)||(19214662-19214821)
chr8 (18-177)||(28353252-28353410)
chr8 (18-177)||(28368437-28368595)
chr8 (159-348)||(31349755-31349940)
chr8 (159-348)||(31363555-31363740)
chr8 (76-177)||(40008896-40008997)
chr8 (82-177)||(31349622-31349718)
chr8 (82-177)||(31363422-31363518)
chr8 (274-348)||(19199408-19199482)
chr8 (274-348)||(19214463-19214537)
chr8 (274-348)||(28353053-28353127)
chr8 (274-348)||(28368238-28368312)
chr8 (256-348)||(19510226-19510319)
chr8 (161-348)||(40008684-40008865)
chr8 (161-253)||(4818888-4818984)
chr8 (83-177)||(21338943-21339037)
chr8 (83-177)||(21378904-21378998)
chr8 (83-177)||(33240612-33240706)
chr8 (83-177)||(33251291-33251385)
chr8 (156-216)||(19199513-19199573)
chr8 (156-216)||(19214568-19214628)
chr8 (156-216)||(28353158-28353218)
chr8 (156-216)||(28368343-28368403)
chr8 (234-337)||(3987774-3987875)
chr8 (256-348)||(3338578-3338671)
chr8 (234-302)||(44570128-44570196)
chr8 (234-302)||(6054098-6054167)
chr8 (299-348)||(31480783-31480832)
chr8 (299-348)||(31495929-31495978)
chr8 (75-175)||(3335915-3336015)
chr8 (75-175)||(12083897-12083997)
chr8 (75-175)||(12099142-12099242)
chr8 (28-175)||(3338734-3338879)
chr8 (18-50)||(6054385-6054417)
chr8 (18-50)||(44569880-44569912)
chr8 (193-250)||(3335800-3335857)
chr8 (144-177)||(4819023-4819056)
[»] scaffold0418 (2 HSPs)
scaffold0418 (157-348)||(15160-15353)
scaffold0418 (18-177)||(14966-15125)
[»] scaffold1629 (2 HSPs)
scaffold1629 (234-348)||(1088-1202)
scaffold1629 (28-175)||(1281-1426)
[»] scaffold0027 (4 HSPs)
scaffold0027 (159-348)||(130584-130769)
scaffold0027 (82-177)||(130806-130902)
scaffold0027 (161-257)||(114401-114501)
scaffold0027 (83-177)||(114540-114634)
[»] scaffold0184 (2 HSPs)
scaffold0184 (18-177)||(25539-25698)
scaffold0184 (161-253)||(25411-25507)
[»] scaffold0078 (2 HSPs)
scaffold0078 (18-177)||(47146-47305)
scaffold0078 (161-253)||(47337-47433)
[»] scaffold0131 (3 HSPs)
scaffold0131 (18-177)||(23234-23392)
scaffold0131 (234-308)||(23548-23622)
scaffold0131 (123-177)||(23404-23458)
[»] scaffold1803 (2 HSPs)
scaffold1803 (159-348)||(634-820)
scaffold1803 (82-177)||(501-597)
[»] scaffold1760 (2 HSPs)
scaffold1760 (159-348)||(723-908)
scaffold1760 (82-177)||(590-686)
[»] scaffold0062 (2 HSPs)
scaffold0062 (18-177)||(56461-56624)
scaffold0062 (161-253)||(56333-56429)
[»] scaffold0166 (1 HSPs)
scaffold0166 (256-348)||(28767-28860)
[»] scaffold0252 (2 HSPs)
scaffold0252 (82-177)||(1983-2079)
scaffold0252 (157-254)||(1846-1947)
[»] scaffold1179 (1 HSPs)
scaffold1179 (256-348)||(1615-1708)
[»] scaffold0250 (2 HSPs)
scaffold0250 (234-308)||(498-572)
scaffold0250 (18-175)||(655-809)
[»] scaffold0182 (1 HSPs)
scaffold0182 (18-175)||(2777-2934)
[»] scaffold0159 (1 HSPs)
scaffold0159 (302-348)||(16881-16927)
[»] scaffold0603 (2 HSPs)
scaffold0603 (234-302)||(549-617)
scaffold0603 (18-50)||(835-867)
[»] scaffold0350 (1 HSPs)
scaffold0350 (302-348)||(13467-13512)


Alignment Details
Target: scaffold0336 (Bit Score: 148; Significance: 5e-78; HSPs: 3)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 1967 - 2125
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1967 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 2065  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2066 cggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 2125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 2250 - 2324
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2250 aaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 2324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 2159 - 2219
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  2159 acattgaagcaagctcaagcacgtaatcacagagaagtagagaaagagtcagagaagatga 2219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 7e-74; HSPs: 97)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 29656979 - 29656820
Alignment:
Q  18 caagaacacaaaa-ccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29656979 caagaacacaaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttt-gcatcaatcctcagagattcgtgtgaatcttcatca 29656881  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29656880 ccggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 29656820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 29671623 - 29671464
Alignment:
Q  18 caagaacacaaaa-ccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29671623 caagaacacaaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttt-gcatcaatcctcagagattcgtgtgaatcttcatca 29671525  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29671524 ccggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 29671464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 5709015 - 5709175
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  5709015 caagaacaaaaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 5709114  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  5709115 cggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 5709175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 5719925 - 5720085
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  5719925 caagaacaaaaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 5720024  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  5720025 cggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 5720085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 5730828 - 5730988
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  5730828 caagaacaaaaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 5730927  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  5730928 cggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 5730988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 5761540 - 5761380
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  5761540 caagaacaaaaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 5761441  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  5761440 cggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 5761380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 156 - 276
Target Start/End: Complemental strand, 29656786 - 29656666
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29656786 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagatgaagaagaggaaccggtaaaccgatttattttcggtccaaa 29656687  T
Q  256 aagcaagcaaaagaatcaaaa 276  Q
    ||||||||| ||| |||||||    
T  29656686 aagcaagcagaaggatcaaaa 29656666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 156 - 276
Target Start/End: Complemental strand, 29671430 - 29671310
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29671430 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagatgaagaagaggaaccggtaaaccgatttattttcggtccaaa 29671331  T
Q  256 aagcaagcaaaagaatcaaaa 276  Q
    ||||||||| ||| |||||||    
T  29671330 aagcaagcagaaggatcaaaa 29671310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 5709211 - 5709404
Alignment:
Q  158 attgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||| |||| |||||||||||    || |||| ||||||| |||||||||| ||||  |||||||||||||||||||||||||||||     
T  5709211 attgaagcaagctcaaacacgaaatcacagagagagaagtagaggaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc- 5709309  T
Q  254 aaaagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||  ||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5709310 aaaagcaagcaaaatcatc-aaaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaa 5709404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 5720121 - 5720314
Alignment:
Q  158 attgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||| |||| |||||||||||    || |||| ||||||| |||||||||| ||||  |||||||||||||||||||||||||||||     
T  5720121 attgaagcaagctcaaacacgaaatcacagagagagaagtagaggaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc- 5720219  T
Q  254 aaaagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||  ||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5720220 aaaagcaagcaaaatcatc-aaaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaa 5720314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 5731024 - 5731217
Alignment:
Q  158 attgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||| |||| |||||||||||    || |||| ||||||| |||||||||| ||||  |||||||||||||||||||||||||||||     
T  5731024 attgaagcaagctcaaacacgaaatcacagagagagaagtagaggaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc- 5731122  T
Q  254 aaaagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||  ||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5731123 aaaagcaagcaaaatcatc-aaaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaa 5731217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 5761344 - 5761151
Alignment:
Q  158 attgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||| |||| |||||||||||    || |||| ||||||| |||||||||| ||||  |||||||||||||||||||||||||||||     
T  5761344 attgaagcaagctcaaacacgaaatcacagagagagaagtagaggaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc- 5761246  T
Q  254 aaaagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||  ||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5761245 aaaagcaagcaaaatcatc-aaaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaa 5761151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 6226185 - 6226380
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcac----agagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    |||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||    
T  6226185 cattgaagcaagctcaagcacgtaatcactgagagagaagcagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcc 6226284  T
Q  253 aaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaag-atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||||| |||| |||||||||| |||||||  | |||||  |||||||| | |||||||||||||| |||||||||||||| | ||||||||    
T  6226285 aaaaagcaagcagaagagtcaaaaatcatcaagaac--attcaagtttttccaaatattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 6226380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 18218992 - 18219176
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  18218992 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 18219087  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag-atttccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||  |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  18219088 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 18219176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 18234300 - 18234484
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  18234300 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 18234395  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag-atttccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||  |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  18234396 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 18234484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 22491025 - 22491220
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    |||||||||||||||||| |||||||||||||||    || |||||||||||| |||||||||| |||   |||||||||||||||||||||||||||||    
T  22491025 cattgaagcaagctcaagtacgtaatcacagagagagaagtagagaaagaatcagagaagatgaagaaacagaaccggtaaaccgatttattttcggtcc 22491124  T
Q  253 aaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaag-atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||||| ||| ||||||||||| |||||||  | |||||  |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  22491125 aaaaagcaagcagaaggatcaaaaatcatcaagaac--attcaagtttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 22491220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 8220739 - 8220935
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcac----agagaagcagagaaagaatcggagaagatgaggaagaggaaccggta-aaccgatttattttcggtc 251  Q
    |||||||||||||||||||||| ||||||    ||||||| |||||||||||| |||||||||| ||||  ||||||||| |||||||||||||||||||    
T  8220739 cattgaagcaagctcaagcacgcaatcacagagagagaagtagagaaagaatcagagaagatgaagaagcagaaccggtagaaccgatttattttcggtc 8220838  T
Q  252 caaaaagca-agcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||| | || | |||||  ||| ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  8220839 caaagaacagatcaaaatcatc-aaaatcatcaagaacagaatcgaaatttccaaagatttcctccattaaaggtttcagccaaaacctcaggtaaaa 8220935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 17903090 - 17903249
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||| | ||  |||||||||| |||||   |||  |||||||||||||||||||||||||||||||||||    
T  17903090 caagaacacaaaaccctaaccgttt-ccagaaactccaaaattcatcagaaatcaacgaatttcacatcaatcctcagagattcgtgtgaatcttcatca 17903188  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  17903189 ctggattgaagattctcctgcaattctaagtgcgagctcacattgaagcaagctcaagcac 17903249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 8205570 - 8205766
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcac----agagaagcagagaaagaatcggagaagatgaggaagaggaaccggta-aaccgatttattttcggtc 251  Q
    |||||||||||||||||||||| ||||||    ||||||| |||||||||||| |||||||||| ||||  ||||||||| |||||||||||||||||||    
T  8205570 cattgaagcaagctcaagcacgcaatcacagagagagaagtagagaaagaatcagagaagatgaagaagcagaaccggtagaaccgatttattttcggtc 8205669  T
Q  252 caaaaagca-agcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||| | || | |||||  ||| ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  8205670 caaagaacagatcaaaatcatc-aaaatcatcaagaacagaatcgaaatttccaaagatttcctccattaaaggtttcagccaaaacctcaagtaaaa 8205766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 17975855 - 17975670
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||| ||||| |||||    
T  17975855 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttatttttggtcc-aaaag 17975760  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  17975759 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 17975670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 17991403 - 17991218
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||| ||||| |||||    
T  17991403 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttatttttggtcc-aaaag 17991308  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  17991307 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 17991218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 43716346 - 43716447
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  43716346 tttttgcatcaatcctcagagattcgtgtgaatcttcatcactggattgaaaattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagc 43716445  T
Q  176 ac 177  Q
    ||    
T  43716446 ac 43716447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 22120218 - 22120059
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| ||||||| |  ||  |||||||||| |||||   |||  |||||||||||||||||||||||||||||||||||    
T  22120218 caagaacacaaaaccctaaccgttt-ccagaaatcaaaaagttcatcagaaatcaacgaatttctcatcaatcctcagagattcgtgtgaatcttcatca 22120120  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  22120119 ctggattgaagattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 22120059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 26684147 - 26684306
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||| | ||  |||||||||| |||||   |||  |||||||||||||||||||||||||||||||||||    
T  26684147 caagaacacaaaaccctaaccgttt-ccagaaactccaaagttcatcagaaatcaacgaatttcacatcaatcctcagagattcgtgtgaatcttcatca 26684245  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||| ||||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  26684246 ctggattggagattctcctacaattctaagtgcgagctcacattgaagcaagctcaagcac 26684306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 16401614 - 16401428
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  16401614 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 16401519  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagatt--tccaaaga--tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| ||  ||||||||  |||||||||||||| |||||||||||||| | ||||||||    
T  16401518 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttctccaaagatttttcctccattaaaagtttcaaccaaaacttcaggtaaaa 16401428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 18217580 - 18217766
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  18217580 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 18217675  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||    |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  18217676 caagcaaaaccatc-aaaaccgtcaagaac--attcaagtttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 18217766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 18251783 - 18251969
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  18251783 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 18251878  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||    |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  18251879 caagcaaaaccatc-aaaaccgtcaagaac--attcaagtttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 18251969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 24321928 - 24322114
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  24321928 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 24322023  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||    |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  24322024 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 24322114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 24337280 - 24337466
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  24337280 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 24337375  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||    |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  24337376 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 24337466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 18218859 - 18218955
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  18218859 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 18218955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 18234167 - 18234263
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  18234167 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 18234263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 24321795 - 24321891
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  24321795 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 24321891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 24337147 - 24337243
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  24337147 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 24337243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 6210837 - 6210932
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  6210837 catcaatcctcagagattcgtgtgaaccttcatcactggattggagatttccctacaattccaagtgcgagctcacattgaagcaagctcaagcac 6210932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 18324411 - 18324506
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||| || |||||||||||||||||||||||||    
T  18324411 catcaatcctcagagattcgtgtgaatcttcatcactggattggagatttccctacaattccaagtgtgagctcacattgaagcaagctcaagcac 18324506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 18339508 - 18339603
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||| || |||||||||||||||||||||||||    
T  18339508 catcaatcctcagagattcgtgtgaatcttcatcactggattggagatttccctacaattccaagtgtgagctcacattgaagcaagctcaagcac 18339603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 22490888 - 22490990
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  22490888 ttttcgcatcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaag 22490987  T
Q  175 cac 177  Q
    |||    
T  22490988 cac 22490990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 5600486 - 5600374
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||   ||||| ||||| |||||||||||||||||||||||||||||    
T  5600486 accgatttattttcggtccaaga-gcaagcaaaggaatcaaaaaccagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaacc 5600390  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  5600389 aaaaccttaggtaaaa 5600374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 5615727 - 5615615
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||   ||||| ||||| |||||||||||||||||||||||||||||    
T  5615727 accgatttattttcggtccaaga-gcaagcaaaggaatcaaaaaccagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaacc 5615631  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  5615630 aaaaccttaggtaaaa 5615615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 6226047 - 6226143
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  6226047 catcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 6226143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 16401746 - 16401650
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  16401746 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagaattcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 16401650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 17975988 - 17975892
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  17975988 catcaatcctcagagattcgtgtgaatcttcatcactggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 17975892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 17991536 - 17991440
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  17991536 catcaatcctcagagattcgtgtgaatcttcatcactggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 17991440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 18217450 - 18217542
Alignment:
Q  86 aatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  18217450 aatcctcagagattcgtgtgaatcttcatcaccggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 18217542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 18251653 - 18251745
Alignment:
Q  86 aatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  18251653 aatcctcagagattcgtgtgaatcttcatcaccggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 18251745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 50140449 - 50140337
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||   ||||| ||||| |||||||||||||||||||||||||||||    
T  50140449 accgatttattttcggtccaaga-gcaagcaaaggaatcaaaaaccagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaacc 50140353  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  50140352 aaaaccttaggtaaaa 50140337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 4715389 - 4715484
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||| |||| ||||||||| |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  4715389 catcaatcctcagagattcgtatgaaccttcatcactggattggagatttccctacaattccaagtgcgagctcacattgaagcaagctcaagcac 4715484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 4730569 - 4730664
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||| |||| ||||||||| |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  4730569 catcaatcctcagagattcgtatgaaccttcatcactggattggagatttccctacaattccaagtgcgagctcacattgaagcaagctcaagcac 4730664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 6186067 - 6186162
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||| ||||||||||||||||||||| ||||||||| |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  6186067 catcgatcctcagagattcgtgtgaaccttcatcactggattggagatttccctacaattccaagtgcgagctcacattgaagcaagctcaagcac 6186162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 175
Target Start/End: Original strand, 16601486 - 16601635
Alignment:
Q  27 aaaaccctaaccgtttt-ccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatcaccggattg 124  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||| ||| ||||||||||||| | ||||    
T  16601486 aaaaccctaaccgtttttccagaaaccctaattttcatcagaatcaacattttttagatcaattctcagagattctgtg-gaatcttcatcacagaattg 16601584  T
Q  125 aagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |   |||  ||||||||||||  |||| ||| ||||||||||| |||||||    
T  16601585 accgtttctctgcaattccaaacgcgagctcgcattgaagcaaactcaagc 16601635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 29140052 - 29139896
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgt-gaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  29140052 caagaacacaaaaccctaaccgttt-ccagaaaccctaaaattcatcagaatcaacaatttttggatcaattctcagagattc-tgtagaatcttcatca 29139955  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  |||||||||| |  |||| ||| |||||||||||||||||||    
T  29139954 ctgaattgatcgtttctctgcaattccgaacgcgagctcgcattgaagcaagctcaagc 29139896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 29154857 - 29154701
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgt-gaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  29154857 caagaacacaaaaccctaaccgttt-ccagaaaccctaaaattcatcagaatcaacaatttttggatcaattctcagagattc-tgtagaatcttcatca 29154760  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  |||||||||| |  |||| ||| |||||||||||||||||||    
T  29154759 ctgaattgatcgtttctctgcaattccgaacgcgagctcgcattgaagcaagctcaagc 29154701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 28107366 - 28107211
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaaca-ttttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||||||||||| |  ||  |||||||||||||||| ||||||| |||||| |||||||||||   |||||||||||||    
T  28107366 caagaacacaaaaccctaaccgttttccagaaatc--aaaattcatcagaatcaacagttttttggatcaattctcagagattctgttgaatcttcatca 28107269  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
     || |||||  ||| | ||||||||||||  |||| ||| |||||||||||||||||||    
T  28107268 tcgaattgatcattct-ctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 28107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 28122602 - 28122447
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaaca-ttttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||||||||||| |  ||  |||||||||||||||| ||||||| |||||| |||||||||||   |||||||||||||    
T  28122602 caagaacacaaaaccctaaccgttttccagaaatc--aaaattcatcagaatcaacagttttttggatcaattctcagagattctgttgaatcttcatca 28122505  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
     || |||||  ||| | ||||||||||||  |||| ||| |||||||||||||||||||    
T  28122504 tcgaattgatcattct-ctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 28122447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 8205442 - 8205535
Alignment:
Q  85 caatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  8205442 caatcctcagagattcgtgtgaatcttcatcactggattgaggaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 8205535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 8220611 - 8220704
Alignment:
Q  85 caatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  8220611 caatcctcagagattcgtgtgaatcttcatcactggattgaggaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 8220704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 28348252 - 28348365
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatc-agcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaac 331  Q
    ||||||||||||||||||||| || |||||||| |||||||||| | ||||||||||   ||||| ||||| ||||||||||||||||||||||||||||    
T  28348252 accgatttattttcggtccaagaa-caagcaaaggaatcaaaaaaccagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaac 28348348  T
Q  332 caaaaccttaggtaaaa 348  Q
    |||||||||||||||||    
T  28348349 caaaaccttaggtaaaa 28348365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 28107116 - 28107005
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagattt-ccaaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||| ||   ||||| ||| |||||||||||||||||||||||||||||||    
T  28107116 accgatttattttcggtccaaaa-gcaagcagaagaatcaaaa-tcatcaagagcat--tcaagtttttccaaagatttcctccattaaaggtttcaacc 28107021  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  28107020 aaaaccttaggtaaaa 28107005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 28122352 - 28122241
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagattt-ccaaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||| ||   ||||| ||| |||||||||||||||||||||||||||||||    
T  28122352 accgatttattttcggtccaaaa-gcaagcagaagaatcaaaa-tcatcaagagcat--tcaagtttttccaaagatttcctccattaaaggtttcaacc 28122257  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  28122256 aaaaccttaggtaaaa 28122241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 22120020 - 22119924
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  22120020 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca 22119924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 26684345 - 26684441
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  26684345 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca 26684441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 28333150 - 28333263
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatc-agcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaac 331  Q
    ||||||||||||||||||||| || |||||||| |||||||||| | ||||||||||   ||||| ||||| |||||||| |||||||||||||||||||    
T  28333150 accgatttattttcggtccaagaa-caagcaaaggaatcaaaaaaccagcaagaacat--tcaagttttcccaaagattttctccattaaaggtttcaac 28333246  T
Q  332 caaaaccttaggtaaaa 348  Q
    |||||||||||||||||    
T  28333247 caaaaccttaggtaaaa 28333263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 10387647 - 10387802
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaaca-ttttttgcatcaatcctcagagattc-gtgtgaatcttcatc 115  Q
    ||||||||||||||||||||||||||||||||| |  ||  |||||||||||||||| ||||||| |||||| ||||||||||| ||| |||||||||||    
T  10387647 caagaacacaaaaccctaaccgttttccagaaatc--aaaattcatcagaatcaacagttttttggatcaattctcagagattctgtg-gaatcttcatc 10387743  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |  |||||||   || | ||||||||||||  |||| ||| |||||||||||||||||||    
T  10387744 attggattgatcgttct-ctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 10387802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 10405021 - 10405176
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaaca-ttttttgcatcaatcctcagagattc-gtgtgaatcttcatc 115  Q
    ||||||||||||||||||||||||||||||||| |  ||  |||||||||||||||| ||||||| |||||| ||||||||||| ||| |||||||||||    
T  10405021 caagaacacaaaaccctaaccgttttccagaaatc--aaaattcatcagaatcaacagttttttggatcaattctcagagattctgtg-gaatcttcatc 10405117  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |  |||||||   || | ||||||||||||  |||| ||| |||||||||||||||||||    
T  10405118 attggattgatcgttct-ctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 10405176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 17903288 - 17903384
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   |||||| |||||||||||||||||||||||    
T  17903288 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccgttaaaccgatttattttcggtcca 17903384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 43716478 - 43716574
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||| ||||||||||||    || ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  43716478 gaagcaagctcaagcacataatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca 43716574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 47197775 - 47197618
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    ||||||| ||||||||||||||||| |||||||| | ||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  47197775 caagaacgcaaaaccctaaccgttt-ccagaaactcaaaagttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatca 47197678  T
Q  117 ccggattgaagattttc-ctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
      | |||||   ||||| ||||||||||||  |||| ||| |||||||||||||||||||    
T  47197677 ttgaattgatcgttttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 47197618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 29139797 - 29139723
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  29139797 accgatttattttcggtccaaagaacaagcagaagaatcaaaaatcatcaagaacagaatcaagatttccgaaga 29139723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 29154602 - 29154528
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  29154602 accgatttattttcggtccaaagaacaagcagaagaatcaaaaatcatcaagaacagaatcaagatttccgaaga 29154528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 7067021 - 7067179
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaaca-ttttttgcatcaatcctcagagattcgtgtg-aatcttcatc 115  Q
    ||||||| ||||||||||||||||| |||||||| | ||  |||||||||||||||| ||||||| |||||| ||||||||||| |||| ||||||||||    
T  7067021 caagaacgcaaaaccctaaccgttt-ccagaaactcaaaaattcatcagaatcaacaattttttggatcaattctcagagattc-tgtggaatcttcatc 7067118  T
Q  116 accggattgaagattttc-ctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |  | |||||   ||||| ||||||||||||  |||| ||| |||||||||||||||||||    
T  7067119 attgaattgatcgttttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 7067179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 7081973 - 7082131
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaaca-ttttttgcatcaatcctcagagattcgtgtg-aatcttcatc 115  Q
    ||||||| ||||||||||||||||| |||||||| | ||  |||||||||||||||| ||||||| |||||| ||||||||||| |||| ||||||||||    
T  7081973 caagaacgcaaaaccctaaccgttt-ccagaaactcaaaaattcatcagaatcaacaattttttggatcaattctcagagattc-tgtggaatcttcatc 7082070  T
Q  116 accggattgaagattttc-ctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |  | |||||   ||||| ||||||||||||  |||| ||| |||||||||||||||||||    
T  7082071 attgaattgatcgttttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 7082131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 10387899 - 10387961
Alignment:
Q  287 acagaatcaagattt-ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10387899 acagaatcaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 10387961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 10405273 - 10405335
Alignment:
Q  287 acagaatcaagattt-ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10405273 acagaatcaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 10405335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 26427085 - 26427134
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26427085 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 26427134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 50140659 - 50140544
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcaca 158  Q
    |||||||||||||||| |||||| |||||| |||||||||||   ||||||||||||| || |||||  ||| | ||||||||||||  |||| ||| ||    
T  50140659 ttcatcagaatcaacagtttttggatcaattctcagagattctgttgaatcttcatcatcgaattgaccattct-ctgcaattccaaacgcgagctcgca 50140561  T
Q  159 ttgaagcaagctcaagc 175  Q
    |||||||||||||||||    
T  50140560 ttgaagcaagctcaagc 50140544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 18283705 - 18283546
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt--ttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcat 114  Q
    |||||||| ||||||||||||||||||||||||| | ||    |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||    
T  18283705 caagaaca-aaaaccctaaccgttttccagaaactcaaaaaagttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcat 18283608  T
Q  115 caccggattgaagattttcctgcaattc-caagtgcgaactcacattgaagcaagctcaagc 175  Q
    || || |||||  ||||  |||||||||  ||  |||| ||| |||||||||||||||||||    
T  18283607 catcgaattgatcatttctctgcaattcaaaaacgcgagctcgcattgaagcaagctcaagc 18283546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 225 - 348
Target Start/End: Complemental strand, 26680941 - 26680818
Alignment:
Q  225 aaccggtaaaccgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccatta 320  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||  | |||||    |||||||||| ||||||||||||    
T  26680941 aaccggtaaaccgatttattttcggtcc-aaaagcaagcagaagaatc-aaaatcatcaagaac--attcaagtttttttccaaagattttcctccatta 26680846  T
Q  321 aaggtttcaaccaaaaccttaggtaaaa 348  Q
    || |||||| ||||||| | ||||||||    
T  26680845 aaagtttcagccaaaacttcaggtaaaa 26680818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 5600696 - 5600581
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcaca 158  Q
    |||||||||||||||| |||||| | |||| |||||||||||   ||||||||||||| || |||||  ||| | ||||||||||||  |||| ||| ||    
T  5600696 ttcatcagaatcaacagtttttggaccaattctcagagattctgttgaatcttcatcatcgaattgatcattct-ctgcaattccaaacgcgagctcgca 5600598  T
Q  159 ttgaagcaagctcaagc 175  Q
    |||||||||||||||||    
T  5600597 ttgaagcaagctcaagc 5600581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 5007616 - 5007662
Alignment:
Q  302 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  5007616 ccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 5007662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 5022875 - 5022921
Alignment:
Q  302 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  5022875 ccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 5022921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 18299006 - 18298847
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt--ttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcat 114  Q
    |||||||| |||||||||||||||||||||| || | ||    |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||    
T  18299006 caagaaca-aaaaccctaaccgttttccagacactcaaaaaagttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcat 18298909  T
Q  115 caccggattgaagattttcctgcaattc-caagtgcgaactcacattgaagcaagctcaagc 175  Q
    || || |||||  ||||  |||||||||  ||  |||| ||| |||||||||||||||||||    
T  18298908 catcgaattgatcatttctctgcaattcaaaaacgcgagctcgcattgaagcaagctcaagc 18298847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 18314307 - 18314148
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt--ttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcat 114  Q
    |||||||| |||||||||||||||||||||| || | ||    |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||    
T  18314307 caagaaca-aaaaccctaaccgttttccagacactcaaaaaagttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcat 18314210  T
Q  115 caccggattgaagattttcctgcaattc-caagtgcgaactcacattgaagcaagctcaagc 175  Q
    || || |||||  ||||  |||||||||  ||  |||| ||| |||||||||||||||||||    
T  18314209 catcgaattgatcatttctctgcaattcaaaaacgcgagctcgcattgaagcaagctcaagc 18314148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 175
Target Start/End: Original strand, 26426797 - 26426942
Alignment:
Q  28 aaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatcaccggattgaa 126  Q
    ||||||||||||||||||||||| |  ||||  |||||||||||| | |||||| |||||| ||||||||||| ||| ||||||||||||  | ||| |     
T  26426797 aaaccctaaccgttttccagaaatcaaaatt--catcagaatcaataatttttggatcaattctcagagattctgtg-gaatcttcatcattgaattaat 26426893  T
Q  127 gattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
      |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  26426894 cgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 26426942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 5615937 - 5615822
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcaca 158  Q
    |||||||||||||||| |||||| | |||| |||||||||||   ||||||||||||| || |||||  ||| | ||||||||||||  |||| ||| |     
T  5615937 ttcatcagaatcaacagtttttggaccaattctcagagattctgttgaatcttcatcatcgaattgatcattct-ctgcaattccaaacgcgagctcgcc 5615839  T
Q  159 ttgaagcaagctcaagc 175  Q
    |||||||||||||||||    
T  5615838 ttgaagcaagctcaagc 5615822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 6186199 - 6186291
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaagca 260  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||| |||    | || ||||||||||||||||||||| |||||||||    
T  6186199 gaagcaagctcaagcacgtaatcacagagaa--------agaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggttcaaaaagca 6186290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 6210969 - 6211061
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaagca 260  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||| |||    | || ||||||||||||||||||||| |||||||||    
T  6210969 gaagcaagctcaagcacgtaatcacagagaa--------agaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggttcaaaaagca 6211060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 51776108 - 51776157
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  51776108 tttccgaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaa 51776157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 51791194 - 51791243
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  51791194 tttccgaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaa 51791243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 4715545 - 4715613
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaagcaa 261  Q
    |||||||||||||||||||||||| |||    | || ||||||||||||||||||||| ||||||||||    
T  4715545 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggttcaaaaagcaa 4715613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 4730701 - 4730793
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaagca 260  Q
    |||||||||||||||||||||||||| ||||        ||||||||||||||||| |||    | || ||||||||||||||||||||| |||||||||    
T  4730701 gaagcaagctcaagcacgtaatcacatagaa--------agaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggttcaaaaagca 4730792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 18324543 - 18324635
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaagca 260  Q
    ||||||||||||||||||||||||||||        |||||||||||||||||||| |||    | || ||||||||||||||||||||| || ||||||    
T  18324543 gaagcaagctcaagcacgtaatcacaga--------gaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggttcagaaagca 18324634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 18339640 - 18339732
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaagca 260  Q
    ||||||||||||||||||||||||||||        |||||||||||||||||||| |||    | || ||||||||||||||||||||| || ||||||    
T  18339640 gaagcaagctcaagcacgtaatcacaga--------gaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggttcagaaagca 18339731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 4410755 - 4410814
Alignment:
Q  194 agagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||    
T  4410755 agagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtcca 4410814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 4426135 - 4426194
Alignment:
Q  194 agagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||    
T  4426135 agagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtcca 4426194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 43716585 - 43716659
Alignment:
Q  273 aaaaatcagcaagaacagaatcaagatttccaaagattt-cctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||| ||||||||   ||||| ||||||||||||| ||||||| ||| |||||||||||||| | ||||||||    
T  43716585 aaaaatcatcaagaacat--tcaagttttccaaagattttcctccatcaaaagtttcaaccaaaacttcaggtaaaa 43716659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 28332964 - 28333055
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||| ||||||||||||  |||||||||||||| | |||| |  |||  ||||||||||||  |||| ||| | |||||||||||||||||    
T  28332964 atcaattctcagagattcgcatgaatcttcatcactgaattg-atctttctctgcaattccaaacgcgagctcgcgttgaagcaagctcaagc 28333055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 28348066 - 28348157
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||| ||||||||||||  |||||||||||||| | |||| |  |||  ||||||||||||  |||| ||| | |||||||||||||||||    
T  28348066 atcaattctcagagattcgcatgaatcttcatcactgaattg-atctttctctgcaattccaaacgcgagctcgcgttgaagcaagctcaagc 28348157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 3e-73; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 26499404 - 26499247
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26499404 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttt-gcatcaatcctcagagattcgtgtgaatcttcatcac 26499307  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26499306 cggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 26499247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 26521884 - 26522073
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| ||    
T  26521884 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aa 26521979  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26521980 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 26522073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 26598625 - 26598782
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26598625 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacatttt-tgcatcaatcctcagagattcgtgtgaatcttcatcac 26598722  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26598723 cggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 26598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 4136614 - 4136456
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  4136614 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttttatcaatcctcagagattcgtgtgaatcttcatcac 4136516  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4136515 cggattgaaggttttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 4136456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 4151540 - 4151382
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  4151540 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttttatcaatcctcagagattcgtgtgaatcttcatcac 4151442  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4151441 cggattgaaggttttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 4151382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 26521692 - 26521851
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaa-ttttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  26521692 caagaaca-aaaaccctaaccgttttccagaaaccctaaattttcatcagaattaacattttctgcatcaatcctcagagattcgtgtgaatcttcatca 26521790  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  26521791 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 26521851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 26499213 - 26499021
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26499213 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagatgaagaagaggaaccggtaaaccgatttattttcggtccaaa 26499114  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa---gatttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||| || |||| |||||||  | ||||     |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  26499113 aagcaagcagaagaatc-aagatcatcaagaac--attcaaacttctttccaaagattttcctccattaaa-gtttcaaccaaaacttcaggtaaaa 26499021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 26598816 - 26599008
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26598816 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagatgaagaagaggaaccggtaaaccgatttattttcggtccaaa 26598915  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa---gatttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||| || |||| |||||||  | ||||     |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  26598916 aagcaagcagaagaatc-aagatcatcaagaac--attcaaacttctttccaaagattttcctccattaaa-gtttcaaccaaaacttcaggtaaaa 26599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 26689903 - 26689720
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  26689903 ttgaagcaagctcaagcacataatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 26689808  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt-ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  26689807 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttcccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaa 26689720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 5138495 - 5138394
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5138495 tttttgcatcaatcctcagagattcgtgtgaatcttcatcactggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagc 5138396  T
Q  176 ac 177  Q
    ||    
T  5138395 ac 5138394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 5151768 - 5151667
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5151768 tttttgcatcaatcctcagagattcgtgtgaatcttcatcactggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagc 5151669  T
Q  176 ac 177  Q
    ||    
T  5151668 ac 5151667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 26661032 - 26660849
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  26661032 ttgaagcaagctcaagcacataatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 26660937  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt-ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  26660936 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttcccaaagatttcctccattaaaggtttcaaccaggaccttaggtaaaa 26660849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 26676225 - 26676042
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  26676225 ttgaagcaagctcaagcacataatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 26676130  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt-ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  26676129 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttcccaaagatttcctccattaaaggtttcaaccaggaccttaggtaaaa 26676042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 23832956 - 23832797
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||| | ||  |||||||||| |||||   |||  |||||||||||||||||||||||||||||||||||    
T  23832956 caagaacacaaaaccctaaccgttt-ccagaaactcaaaagttcatcagaaatcaacgaatttcacatcaatcctcagagattcgtgtgaatcttcatca 23832858  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  23832857 ctggattgaagattctcctgcaattctaagtgcgagctcacattgaagcaagctcaagcac 23832797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 39352190 - 39352031
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||| | ||  |||||||||| |||||   |||  |||||||||||||||||||||||||||||||||||    
T  39352190 caagaacacaaaaccctaaccgttt-ccagaaactcaaaagttcatcagaaatcaacgaatttcacatcaatcctcagagattcgtgtgaatcttcatca 39352092  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  39352091 ctggattgaagattctcctgcaattctaagtgcgagctcacattgaagcaagctcaagcac 39352031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 161 - 348
Target Start/End: Complemental strand, 5138363 - 5138173
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    |||||||||||||||||| |||||||||||    || |||||||||||| |||||||||| |||   ||||||||||||||||||||||||||||| |||    
T  5138363 gaagcaagctcaagcacgaaatcacagagagagaagtagagaaagaatcagagaagatgaagaaacagaaccggtaaaccgatttattttcggtcc-aaa 5138265  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaag--atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||| ||||||| ||||||| |||||||  | |||||   |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  5138264 agcaagcagaagaatc-aaaatcatcaagaac--attcaagttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 5138173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 161 - 348
Target Start/End: Complemental strand, 5151636 - 5151446
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    |||||||||||||||||| |||||||||||    || |||||||||||| |||||||||| |||   ||||||||||||||||||||||||||||| |||    
T  5151636 gaagcaagctcaagcacgaaatcacagagagagaagtagagaaagaatcagagaagatgaagaaacagaaccggtaaaccgatttattttcggtcc-aaa 5151538  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaag--atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||| ||||||| ||||||| |||||||  | |||||   |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  5151537 agcaagcagaagaatc-aaaatcatcaagaac--attcaagttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 5151446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 4136331 - 4136257
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4136331 aaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 4136257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 4151257 - 4151183
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4151257 aaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 4151183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 4273234 - 4273390
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||||| ||| |||||||| |||    
T  4273234 caagaaca-aaaaccctaaccgttttccagaaaccctaatttccatcagaatcaacattttttagatcaattctcagagattctgtg-gaatcttcgtca 4273331  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  4273332 ctgaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 4273390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 16160776 - 16160932
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  16160776 caagaacacaaaaccctaaccgttt-ccaaaaaccctaaatttcatcagaatcaacagtttttggatcaattctcagagattctgtg-gaatcttcatca 16160873  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  16160874 ctgaattgatcgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 16160932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 26661164 - 26661068
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaaga-ttttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  26661164 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaggagttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 26661068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 26676357 - 26676261
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaaga-ttttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  26676357 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaggagttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 26676261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 26687295 - 26687391
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaaga-ttttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  26687295 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaggagttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 26687391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 26690035 - 26689939
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaaga-ttttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  26690035 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaggagttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 26689939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 31118917 - 31119029
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||| | || |||||||| |||||||||| |||||||||||   ||||| ||||| |||||||||||||||||||||||||||||    
T  31118917 accgatttattttcggtcccagaa-caagcaaaggaatcaaaaaccagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaacc 31119013  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  31119014 aaaaccttaggtaaaa 31119029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 31133092 - 31133204
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||| | || |||||||| |||||||||| |||||||||||   ||||| ||||| |||||||||||||||||||||||||||||    
T  31133092 accgatttattttcggtcccagaa-caagcaaaggaatcaaaaaccagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaacc 31133188  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  31133189 aaaaccttaggtaaaa 31133204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 32999509 - 32999398
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||   ||||| ||||| |||| ||||||||||||||||||||||||    
T  32999509 accgatttattttcggtccaaaa-gcaagcagaagaatcaaaa-tcatcaagaacat--tcaagttttcccaaagttttcctccattaaaggtttcaacc 32999414  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  32999413 aaaaccttaggtaaaa 32999398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 348
Target Start/End: Complemental strand, 26686305 - 26686179
Alignment:
Q  219 aagaggaaccggtaaaccgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctcca 317  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||  |  ||||||||   ||||| ||||| ||||||||||||||    
T  26686305 aagatgaaccggtaaaccgatttattttcggtccaaaa-gcaagcaaaatcatcaaaac-cgtcaagaacat--tcaagttttcccaaagatttcctcca 26686210  T
Q  318 ttaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||||||||| ||||||||||||||    
T  26686209 ttaaaggtttcaaccagaaccttaggtaaaa 26686179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 23832757 - 23832662
Alignment:
Q  162 aagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  23832757 aagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca 23832662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 36880898 - 36880804
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| ||||||||||||| |||||||||||||| | ||||||||||| ||| |||||| |||||||| ||||||| |||||||||||||||||    
T  36880898 atcaattctcagagattcgtatgaatcttcatcactgaattgaagatttccctacaattctaagtgcgagctcacatcgaagcaagctcaagcac 36880804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 11028280 - 11028126
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||||||||||||||||||| |||||||| |  ||||  |||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  11028280 caagaacacaaaaccctaaccgttctccagaaatcaaaatt--catcagaatcaacagtttttggatcaattctcagagattctgtg-gaatcttcatca 11028184  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
     || |||||   || | ||||||||||||  |||| ||| |||||||||||||||||||    
T  11028183 tcgaattgatcgttct-ctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 11028126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 32999759 - 32999604
Alignment:
Q  18 caagaacacaaaaccctaaccgtttt-ccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||||||||||||||||||||| ||||||| |  ||||  |||||||||||||| |||||| |||||| |||||||||||   |||||||||||||    
T  32999759 caagaacacaaaaccctaaccgtttttccagaaatcaaaatt--catcagaatcaacagtttttggatcaattctcagagattctgttgaatcttcatca 32999662  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   || | ||||||||||||  |||| ||| |||||||||||||||||||    
T  32999661 ctgaattgatcgttct-ctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 32999604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 39351992 - 39351896
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||||||||||    || |||||| |||||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  39351992 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaggaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca 39351896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 4136422 - 4136362
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  4136422 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagagtcagagaagatga 4136362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 4151348 - 4151288
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  4151348 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagagtcagagaagatga 4151288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 17241586 - 17241659
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  17241586 accgatttattttcggtccaaagaacaagcaaaagaatcaaaaa-cagcaagaacagaatcaagttttccgaaga 17241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 26687427 - 26687484
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  26687427 ttgaagcaagctcaagcacataatcacagagaagcagagaaagaatcagagaagatga 26687484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 4273519 - 4273580
Alignment:
Q  287 acagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  4273519 acagaatccagttttccaaagattttctccattaaaggtttcaaccaaaacctcaggtaaaa 4273580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 11028032 - 11027971
Alignment:
Q  287 acagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  11028032 acagaatctagttttccaaagattttctccattaaaggtttcaaccaaaacctcaggtaaaa 11027971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 17241387 - 17241503
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcac 157  Q
    |||||||||||||||| |||||| |||||| ||||||||||| ||| |||||||||||| || |||||  ||||  ||||||||| ||  |||| ||| |    
T  17241387 ttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatcatcgaattgatcatttctctgcaattcaaaacgcgagctcgc 17241485  T
Q  158 attgaagcaagctcaagc 175  Q
    ||||||||||||||||||    
T  17241486 attgaagcaagctcaagc 17241503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 31118707 - 31118822
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcaca 158  Q
    |||||||||||||||| |||||| |||||| |||||||||||   ||||||||||||| || |||||  ||| | ||||||||||||  |||| ||| ||    
T  31118707 ttcatcagaatcaacagtttttggatcaattctcagagattctgttgaatcttcatcatcgaattgatcattct-ctgcaattccaaacgcgagctcgca 31118805  T
Q  159 ttgaagcaagctcaagc 175  Q
    || ||||||||||||||    
T  31118806 ttaaagcaagctcaagc 31118822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 31132882 - 31132997
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcaca 158  Q
    |||||||||||||||| |||||| |||||| |||||||||||   ||||||||||||| || |||||  ||| | ||||||||||||  |||| ||| ||    
T  31132882 ttcatcagaatcaacagtttttggatcaattctcagagattctgttgaatcttcatcatcgaattgatcattct-ctgcaattccaaacgcgagctcgca 31132980  T
Q  159 ttgaagcaagctcaagc 175  Q
    || ||||||||||||||    
T  31132981 ttaaagcaagctcaagc 31132997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 26265833 - 26265788
Alignment:
Q  303 caaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  26265833 caaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 26265788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 26325865 - 26325820
Alignment:
Q  303 caaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  26325865 caaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 26325820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 26696034 - 26696083
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  26696034 tttccaaagagtttctccattaaaggtttcaaccaaaaccttaggtaaaa 26696083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 36880741 - 36880679
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||||    
T  36880741 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtccaaa 36880679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 1592619 - 1592527
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattga-agattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||| ||||||||||||| |||||||||||||| | |||||  |||| | ||||||||||||  |||| ||| |||  ||||||||||||||    
T  1592619 atcaattctcagagattcgtatgaatcttcatcactgaattgatcgattct-ctgcaattccaaacgcgagctcgcatcaaagcaagctcaagc 1592527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 3e-73; HSPs: 93)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 24675171 - 24675360
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| ||    
T  24675171 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aa 24675266  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24675267 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 24675360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 24717698 - 24717887
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| ||    
T  24717698 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aa 24717793  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24717794 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 24717887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 24733158 - 24733347
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| ||    
T  24733158 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aa 24733253  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24733254 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 24733347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 6868059 - 6868217
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  6868059 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttttatcaatcctcagagattcgtgtgaatcttcatcac 6868157  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6868158 cggattgaaggttttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 6868217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 6883183 - 6883341
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  6883183 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttttatcaatcctcagagattcgtgtgaatcttcatcac 6883281  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6883282 cggattgaaggttttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 6883341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 24674979 - 24675138
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaa-ttttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  24674979 caagaaca-aaaaccctaaccgttttccagaaaccctaaattttcatcagaattaacattttctgcatcaatcctcagagattcgtgtgaatcttcatca 24675077  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  24675078 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 24675138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 24717506 - 24717665
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaa-ttttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  24717506 caagaaca-aaaaccctaaccgttttccagaaaccctaaattttcatcagaattaacattttctgcatcaatcctcagagattcgtgtgaatcttcatca 24717604  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  24717605 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 24717665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 24732966 - 24733125
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaa-ttttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  24732966 caagaaca-aaaaccctaaccgttttccagaaaccctaaattttcatcagaattaacattttctgcatcaatcctcagagattcgtgtgaatcttcatca 24733064  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  24733065 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 24733125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 28912143 - 28912334
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||     
T  28912143 cattgaagcaagctcaagcacataatcacagagaagtagagaaagaatcagagaagacgaagaagatgaaccggtaaaccgatttattttcggtccaaag 28912242  T
Q  257 agca-agcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    | || | |||||  ||| ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28912243 aacagatcaaaaccatc-aaattcatcaagaacagaatcaagttttccaaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaa 28912334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 28927411 - 28927602
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||     
T  28927411 cattgaagcaagctcaagcacataatcacagagaagtagagaaagaatcagagaagacgaagaagatgaaccggtaaaccgatttattttcggtccaaag 28927510  T
Q  257 agca-agcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    | || | |||||  ||| ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28927511 aacagatcaaaaccatc-aaattcatcaagaacagaatcaagttttccaaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaa 28927602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 30143572 - 30143755
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  30143572 ttgaagcaagctcaagcacataatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 30143667  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt-ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  30143668 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttcccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaa 30143755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 30177622 - 30177805
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  30177622 ttgaagcaagctcaagcacataatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 30177717  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt-ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  30177718 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttcccaaagatttcctccattaaaggtttcaaccagaaccttaggtaaaa 30177805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 33510216 - 33510401
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  33510216 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 33510311  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  33510312 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 33510401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 33525479 - 33525664
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  33525479 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 33525574  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  33525575 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 33525664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 26771901 - 26772059
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    ||||||||||||||||||||||||| |||||||    ||  |||||||||||||||   |||  ||||||||||||||||||||||||||||||||||||    
T  26771901 caagaacacaaaaccctaaccgttt-ccagaaatttcaaaattcatcagaatcaacgaatttcacatcaatcctcagagattcgtgtgaatcttcatcac 26771999  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
     |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  26772000 tggattgaagattctcctgcaattctaagtgcgagctcacattgaagcaagctcaagcac 26772059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 27282140 - 27282298
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    ||||||||||||||||||||||||| |||||||    ||  |||||||||||||||   |||  ||||||||||||||||||||||||||||||||||||    
T  27282140 caagaacacaaaaccctaaccgttt-ccagaaatttcaaaattcatcagaatcaacgaatttcacatcaatcctcagagattcgtgtgaatcttcatcac 27282238  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
     |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  27282239 tggattgaagattctcctgcaattctaagtgcgagctcacattgaagcaagctcaagcac 27282298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 15650030 - 15649871
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| ||||||| |  ||  ||||||| || |||||   |||  |||||||||||||||||||||||||||||||||||    
T  15650030 caagaacacaaaaccctaaccgttt-ccagaaatcaaaaagttcatcaaaaatcaactaatttcacatcaatcctcagagattcgtgtgaatcttcatca 15649932  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  15649931 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 15649871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 15665406 - 15665247
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| ||||||| |  ||  ||||||| || |||||   |||  |||||||||||||||||||||||||||||||||||    
T  15665406 caagaacacaaaaccctaaccgttt-ccagaaatcaaaaagttcatcaaaaatcaactaatttcacatcaatcctcagagattcgtgtgaatcttcatca 15665308  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  15665307 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 15665247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 43071903 - 43072059
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  43071903 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttggatcaatcctcagagattctgtg-gaatcttcatca 43072000  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  43072001 ctgaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 43072059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 43087190 - 43087346
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  43087190 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttggatcaatcctcagagattctgtg-gaatcttcatca 43087287  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  43087288 ctgaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 43087346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 28572205 - 28572306
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  28572205 tttttacatcaatcctcagagattcgtgtgaatcttcatcactggattgaagattctcctgcaattccaagtgcgagctcacattaaagcaagctcaagc 28572304  T
Q  176 ac 177  Q
    ||    
T  28572305 ac 28572306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 42136685 - 42136879
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    ||||||||||||||||| |||| |||||||||||    || |||||||||||| ||||||||||  |||  |||||||||||||||||||||||||||||    
T  42136685 cattgaagcaagctcaaacacgaaatcacagagagagaagtagagaaagaatcagagaagatgaa-aagctgaaccggtaaaccgatttattttcggtcc 42136783  T
Q  253 aaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaag--atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||| | ||| || |||| || ||||||| |||||||  | |||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42136784 aaagaacaaacagaagagtc-aaaatcatcaagaac--attcaagttttttccaaagattttcctccattaaaggtttcaaccaaaaccttaggtaaaa 42136879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 42136548 - 42136650
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  42136548 ttttcgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaag 42136647  T
Q  175 cac 177  Q
    |||    
T  42136648 cac 42136650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 33510083 - 33510179
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  33510083 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 33510179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 33525346 - 33525442
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  33525346 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 33525442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 22990406 - 22990311
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  22990406 catcaatcctcagagattcgtgtgaaccttcatcactggattggagatttccctacaattccaagtgcgagctcacattgaagcaagctcaagcac 22990311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 23005403 - 23005308
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  23005403 catcaatcctcagagattcgtgtgaaccttcatcactggattggagatttccctacaattccaagtgcgagctcacattgaagcaagctcaagcac 23005308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 6868342 - 6868416
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6868342 aaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 6868416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 6883466 - 6883540
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6883466 aaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 6883540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 28912008 - 28912110
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  28912008 tttttacatcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattatcctacaattcaaagtgcgagctcacattgaagcaagctcaag 28912107  T
Q  175 cac 177  Q
    |||    
T  28912108 cac 28912110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 28927276 - 28927378
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  28927276 tttttacatcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattatcctacaattcaaagtgcgagctcacattgaagcaagctcaag 28927375  T
Q  175 cac 177  Q
    |||    
T  28927376 cac 28927378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 24786477 - 24786384
Alignment:
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa-gatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24786477 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 24786384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 5632004 - 5632078
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5632004 aaaatcatcaagaacagaatcaagatttccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 5632078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 5646878 - 5646952
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5646878 aaaatcatcaagaacagaatcaagatttccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 5646952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 42065872 - 42065716
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgt-gaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  42065872 caagaacacaaaaccctaaccgttt-ccagaaaccctaaaattcatcagaatcaacaatttttggatcaattctcagagattc-tgtagaatcttcatca 42065775  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  |||||||||| |  |||| ||| |||||||||||||||||||    
T  42065774 ctgaattgatcgtttctctgcaattccgaacgcgagctcgcattgaagcaagctcaagc 42065716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 13315751 - 13315637
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaaga--tttccaaagatttcctccattaaaggtttcaac 331  Q
    ||||||||||||||||||||| | ||||||||||  |||||||  || ||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  13315751 accgatttattttcggtccaaca-gcaagcaaaatcatcaaaac-catcaagaacagaatcaaaagttttccaaagatttcctccattaaaggtttcaac 13315654  T
Q  332 caaaaccttaggtaaaa 348  Q
    |||||||||||||||||    
T  13315653 caaaaccttaggtaaaa 13315637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 13331078 - 13330964
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaaga--tttccaaagatttcctccattaaaggtttcaac 331  Q
    ||||||||||||||||||||| | ||||||||||  |||||||  || ||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  13331078 accgatttattttcggtccaaca-gcaagcaaaatcatcaaaac-catcaagaacagaatcaaaagttttccaaagatttcctccattaaaggtttcaac 13330981  T
Q  332 caaaaccttaggtaaaa 348  Q
    |||||||||||||||||    
T  13330980 caaaaccttaggtaaaa 13330964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 13433604 - 13433511
Alignment:
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa-gatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13433604 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattcaaggtttcaaccaaaaccttaggtaaaa 13433511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 13444498 - 13444405
Alignment:
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa-gatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13444498 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattcaaggtttcaaccaaaaccttaggtaaaa 13444405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 31425325 - 31425439
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaaga--tttccaaagatttcctccattaaaggtttcaac 331  Q
    ||||||||||||||||||||| | ||||||||||  |||||||  || ||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  31425325 accgatttattttcggtccaaca-gcaagcaaaatcatcaaaac-catcaagaacagaatcaaaagttttccaaagatttcctccattaaaggtttcaac 31425422  T
Q  332 caaaaccttaggtaaaa 348  Q
    |||||||||||||||||    
T  31425423 caaaaccttaggtaaaa 31425439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 31440663 - 31440777
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaaga--tttccaaagatttcctccattaaaggtttcaac 331  Q
    ||||||||||||||||||||| | ||||||||||  |||||||  || ||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  31440663 accgatttattttcggtccaaca-gcaagcaaaatcatcaaaac-catcaagaacagaatcaaaagttttccaaagatttcctccattaaaggtttcaac 31440760  T
Q  332 caaaaccttaggtaaaa 348  Q
    |||||||||||||||||    
T  31440761 caaaaccttaggtaaaa 31440777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 30143440 - 30143536
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  30143440 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaggaattcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 30143536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 30177490 - 30177586
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  30177490 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaggaattcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 30177586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 32587301 - 32587190
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||   ||||| ||||| |||||||||||||||||||||||||||||    
T  32587301 accgatttattttcggtccaaaa-gcaagcagaagaatcaaaa-tcatcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaacc 32587206  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  32587205 aaaaccttaggtaaaa 32587190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 32605730 - 32605619
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||   ||||| ||||| |||||||||||||||||||||||||||||    
T  32605730 accgatttattttcggtccaaaa-gcaagcagaagaatcaaaa-tcatcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaacc 32605635  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  32605634 aaaaccttaggtaaaa 32605619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 161 - 337
Target Start/End: Complemental strand, 15649839 - 15649668
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||       
T  15649839 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca--- 15649743  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaac 337  Q
           | ||||   |||||||| |||||||||||||||| |||||| |||||| ||| || ||| ||||||||||||||    
T  15649742 ------gagaagatcaaaaaatcatcaagaacagaatcaagttttccagagattttctctatcaaaagtttcaaccaaaac 15649668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 161 - 337
Target Start/End: Complemental strand, 15665215 - 15665044
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||       
T  15665215 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca--- 15665119  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaac 337  Q
           | ||||   |||||||| |||||||||||||||| |||||| |||||| ||| || ||| ||||||||||||||    
T  15665118 ------gagaagatcaaaaaatcatcaagaacagaatcaagttttccagagattttctctatcaaaagtttcaaccaaaac 15665044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 29893322 - 29893166
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||| ||| || ||||||||||| ||| ||||||||||||    
T  29893322 caagaacacaaaaccctaaccgttt-ccagaaaccctaaaattcatcagaatcaacaatttttggatcgattctcagagattctgtg-gaatcttcatca 29893225  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | ||||    ||| |||||||||||||  ||||  || |||||||||||||||||||    
T  29893224 ctgaattggtcgtttccctgcaattccaaacgcgagttcgcattgaagcaagctcaagc 29893166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 348
Target Start/End: Original strand, 28572337 - 28572521
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||| |     
T  28572337 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtccaga- 28572435  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
       |||  ||| |   |||||||| |||||||  | ||||| |||||||||| |||||||||| ||| |||||||||||||| | ||||||||    
T  28572436 --gaagataaaaa---aaaaatcatcaagaac--attcaagttttccaaagattttcctccatcaaaagtttcaaccaaaacttcaggtaaaa 28572521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 32605980 - 32605825
Alignment:
Q  18 caagaacacaaaaccctaaccgtttt-ccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||||||||||||||||||||| ||||||| |  ||||  |||||||||||||| |||||| |||||| |||||||||||   |||||||||||||    
T  32605980 caagaacacaaaaccctaaccgtttttccagaaatcaaaatt--catcagaatcaacagtttttggatcaattctcagagattctgttgaatcttcatca 32605883  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   || | |||||||||||| ||||| ||| |||||||||||||||||||    
T  32605882 ctgaattgatcgttct-ctgcaattccaaatgcgagctcgcattgaagcaagctcaagc 32605825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 22443970 - 22444064
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| ||||||||||||| |||||||||||||| | ||||||||||| ||| |||||| |||||||| ||||||| |||||||||||||||||    
T  22443970 atcaattctcagagattcgtatgaatcttcatcactgaattgaagatttccctacaattctaagtgcgagctcacatcgaagcaagctcaagcac 22444064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 37725724 - 37725878
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||||||||||||||||||| |||||||| |  ||||  |||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  37725724 caagaacacaaaaccctaaccgttctccagaaatcaaaatt--catcagaatcaacagtttttggatcaattctcagagattctgtg-gaatcttcatca 37725820  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
     || |||||   || | ||||||||||||  |||| ||| |||||||||||||||||||    
T  37725821 tcgaattgatcgttct-ctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 37725878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 42065617 - 42065543
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  42065617 accgatttattttcggtccaaagaacaagcagaagaatcaaaaatcatcaagaacagaatcaagatttccgaaga 42065543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 6868251 - 6868311
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  6868251 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagagtcagagaagatga 6868311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 6883375 - 6883435
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  6883375 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagagtcagagaagatga 6883435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 32587551 - 32587396
Alignment:
Q  18 caagaacacaaaaccctaaccgtttt-ccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||||||||||||||||||||| ||||||| |  ||||  ||| |||||||||| |||||| |||||| |||||||||||   |||||||||||||    
T  32587551 caagaacacaaaaccctaaccgtttttccagaaatcaaaatt--cattagaatcaacagtttttggatcaattctcagagattctgttgaatcttcatca 32587454  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   || | ||||||||||||  |||| ||| |||||||||||||||||||    
T  32587453 ctgaattgatcgttct-ctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 32587396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 12056869 - 12056795
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||| ||||| ||||    
T  12056869 accgatttattttcggtccaaagaacaagcagaagaatcaaaaaccagcaagaacagaatcaagttttccgaaga 12056795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 26772195 - 26772269
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||| ||||| ||||    
T  26772195 accgatttattttcggtccaaagaacaagcagaagaatcaaaaatcatcaagaacagaatcaagttttccgaaga 26772269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 27282434 - 27282508
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||| ||||| ||||    
T  27282434 accgatttattttcggtccaaagaacaagcagaagaatcaaaaatcatcaagaacagaatcaagttttccgaaga 27282508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 28643067 - 28643129
Alignment:
Q  287 acagaatcaagattt-ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28643067 acagaatcaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 28643129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 28658472 - 28658534
Alignment:
Q  287 acagaatcaagattt-ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28658472 acagaatcaagtttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 28658534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 2504875 - 2504943
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||||| ||||    
T  2504875 accgatttattttcggtccaaagaacaagcagaagcatcaaaaatcagcaagaacagaatcaagttttc 2504943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 2520195 - 2520263
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||||| ||||    
T  2520195 accgatttattttcggtccaaagaacaagcagaagcatcaaaaatcagcaagaacagaatcaagttttc 2520263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 5631794 - 5631909
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcaca 158  Q
    |||||||||||||||| |||||| |||||| |||||||||||   ||||||||||||| || |||||  ||| | ||||||||||||  |||| ||| ||    
T  5631794 ttcatcagaatcaacagtttttgaatcaattctcagagattctgttgaatcttcatcatcgaattgatcattct-ctgcaattccaaacgcgagctcgca 5631892  T
Q  159 ttgaagcaagctcaagc 175  Q
    |||||||||||||||||    
T  5631893 ttgaagcaagctcaagc 5631909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 5646668 - 5646783
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcaca 158  Q
    |||||||||||||||| |||||| |||||| |||||||||||   ||||||||||||| || |||||  ||| | ||||||||||||  |||| ||| ||    
T  5646668 ttcatcagaatcaacagtttttgaatcaattctcagagattctgttgaatcttcatcatcgaattgatcattct-ctgcaattccaaacgcgagctcgca 5646766  T
Q  159 ttgaagcaagctcaagc 175  Q
    |||||||||||||||||    
T  5646767 ttgaagcaagctcaagc 5646783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 12057098 - 12056952
Alignment:
Q  28 aaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagatt-cgtgtgaatcttcatcaccggattgaa 126  Q
    ||||||||||||||||||||||| |  ||||  |||||||||||||| |||||| |||||| ||||||||||  ||| ||||||||||||  | |||||     
T  12057098 aaaccctaaccgttttccagaaatcaaaatt--catcagaatcaacaatttttggatcaattctcagagattatgtg-gaatcttcatcattgaattgat 12057002  T
Q  127 gattttc-ctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
      ||||| ||||||||||||  |||| ||| |||||||||||||||||||    
T  12057001 cgttttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 12056952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 29893067 - 29892993
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||  ||| ||||||||||| |||||||||||||||||||||| ||||    
T  29893067 accgatttattttcggtccaaagaacaagcggaaggatcaaaaatcatcaagaacagaatcaagatttccgaaga 29892993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 37725973 - 37726034
Alignment:
Q  287 acagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  37725973 acagaatctagttttccaaagattttctccattaaaggtttcaaccaaaacctcaggtaaaa 37726034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 29973273 - 29973224
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  29973273 tttccaaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaa 29973224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 30023370 - 30023419
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  30023370 tttccaaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaa 30023419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 30038634 - 30038683
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  30038634 tttccaaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaa 30038683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 37662453 - 37662384
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatc-aaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  37662453 accgatttattttcggtccaaagaacaagcagaagcatcaaaaaatcagcaagaacagaatcaagttttc 37662384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 37677736 - 37677667
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatc-aaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  37677736 accgatttattttcggtccaaagaacaagcagaagcatcaaaaaatcagcaagaacagaatcaagttttc 37677667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 22990250 - 22990182
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaagcaa 261  Q
    |||||||||||||||||||||||| |||    | || ||||||||||||||||||||| ||||||||||    
T  22990250 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggttcaaaaagcaa 22990182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 23005247 - 23005179
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaagcaa 261  Q
    |||||||||||||||||||||||| |||    | || ||||||||||||||||||||| ||||||||||    
T  23005247 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggttcaaaaagcaa 23005179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 3783513 - 3783562
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  || ||||||| ||||||||||||||||||||||||||||    
T  3783513 tttccaaagcatttctccattgaaggtttcaaccaaaaccttaggtaaaa 3783562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 3798868 - 3798917
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  || ||||||| ||||||||||||||||||||||||||||    
T  3798868 tttccaaagcatttctccattgaaggtttcaaccaaaaccttaggtaaaa 3798917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 2504625 - 2504657
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  2504625 caagaacacaaaaccctaaccgttttccagaaa 2504657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 2519945 - 2519977
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  2519945 caagaacacaaaaccctaaccgttttccagaaa 2519977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 13316001 - 13315969
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  13316001 caagaacacaaaaccctaaccgttttccagaaa 13315969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 13331328 - 13331296
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  13331328 caagaacacaaaaccctaaccgttttccagaaa 13331296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 31425075 - 31425107
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  31425075 caagaacacaaaaccctaaccgttttccagaaa 31425107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 31440413 - 31440445
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  31440413 caagaacacaaaaccctaaccgttttccagaaa 31440445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 33873247 - 33873307
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||    
T  33873247 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtcca 33873307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 33884150 - 33884210
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||    
T  33884150 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtcca 33884210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 37662703 - 37662671
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  37662703 caagaacacaaaaccctaaccgttttccagaaa 37662671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 37677986 - 37677954
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  37677986 caagaacacaaaaccctaaccgttttccagaaa 37677954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 30145719 - 30145761
Alignment:
Q  75 ttttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||    
T  30145719 tttttcgcatcaattctcagagattcgtatgaatcttcatcac 30145761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 30160930 - 30160972
Alignment:
Q  75 ttttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||    
T  30160930 tttttcgcatcaattctcagagattcgtatgaatcttcatcac 30160972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 30145877 - 30145934
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggt 250  Q
    |||||||||||||||||||||||| |||    | || |||||||||||||||||||||    
T  30145877 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggt 30145934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 30161088 - 30161145
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggt 250  Q
    |||||||||||||||||||||||| |||    | || |||||||||||||||||||||    
T  30161088 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggt 30161145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 33873093 - 33873185
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattga-agattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||| ||||||||||||| |||||||||||||| | |||||  |||| | ||||||||||||  |||| ||| |||  ||||||||||||||    
T  33873093 atcaattctcagagattcgtatgaatcttcatcactgaattgattgattct-ctgcaattccaaacgcgagctcgcatcaaagcaagctcaagc 33873185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 33883996 - 33884088
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattga-agattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||| ||||||||||||| |||||||||||||| | |||||  |||| | ||||||||||||  |||| ||| |||  ||||||||||||||    
T  33883996 atcaattctcagagattcgtatgaatcttcatcactgaattgattgattct-ctgcaattccaaacgcgagctcgcatcaaagcaagctcaagc 33884088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 3e-73; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 251874 - 251717
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  251874 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttt-gcatcaatcctcagagattcgtgtgaatcttcatcac 251777  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  251776 cggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 251717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 12707723 - 12707534
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| ||    
T  12707723 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aa 12707628  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12707627 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 12707534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 12723123 - 12722934
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| ||    
T  12723123 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aa 12723028  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12723027 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 12722934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 267404 - 267247
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  267404 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttt-gcatcaatcctcagagattcgtgtgaatcttcatcac 267307  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  267306 cggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagatcaagcac 267247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 12707915 - 12707756
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaa-ttttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  12707915 caagaaca-aaaaccctaaccgttttccagaaaccctaaattttcatcagaattaacattttctgcatcaatcctcagagattcgtgtgaatcttcatca 12707817  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  12707816 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 12707756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 12723315 - 12723156
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaa-ttttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  12723315 caagaaca-aaaaccctaaccgttttccagaaaccctaaattttcatcagaattaacattttctgcatcaatcctcagagattcgtgtgaatcttcatca 12723217  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  12723216 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 12723156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 37943030 - 37942837
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    ||||||||||||||||| |||| |||||||||||    || |||||||||||| |||||||||| ||||  |||||||||||||||||||||||||||||    
T  37943030 cattgaagcaagctcaaacacgaaatcacagagagagaagtagagaaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc 37942931  T
Q  253 aaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||| ||||||||||  ||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37942930 aaaa-gcaagcaaaatcatcaaaa-tcatcaagaacagaatcaagatttccagagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 37942837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 37368951 - 37369144
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagaga--agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaa 254  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||    
T  37368951 cattgaagcaagctcaagcacgtaatcacagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtccaa 37369050  T
Q  255 aaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaag-atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||| ||||||||||||||| |||||||  | |||||  |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  37369051 aaagcaagcagaagaatcaaaaatcatcaagaac--attcaagtttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 37369144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 37386785 - 37386978
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagaga--agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaa 254  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||    
T  37386785 cattgaagcaagctcaagcacgtaatcacagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtccaa 37386884  T
Q  255 aaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaag-atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||| ||||||||||||||| |||||||  | |||||  |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  37386885 aaagcaagcagaagaatcaaaaatcatcaagaac--attcaagtttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 37386978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 16159429 - 16159589
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  16159429 caagaacaaaaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 16159528  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  16159529 cggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 16159589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 16170330 - 16170490
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  16170330 caagaacaaaaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 16170429  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  16170430 cggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 16170490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 27797435 - 27797595
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  27797435 caagaacaaaaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 27797534  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  27797535 cggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 27797595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 27812524 - 27812684
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  27812524 caagaacaaaaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 27812623  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  27812624 cggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 27812684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 251683 - 251490
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  251683 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagatgaagaagatgaaccggtaaaccgatttattttcggtccaaa 251584  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
     |||||||| ||||||| ||||||| |||||||  | |||||    |||||||| | |||||||||||||| |||||||||||||| | ||||||||    
T  251583 gagcaagcagaagaatc-aaaatcatcaagaac--attcaagtttctttccaaaaattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 251490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 267213 - 267020
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  267213 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagatgaagaagatgaaccggtaaaccgatttattttcggtccaaa 267114  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
     |||||||| ||||||| ||||||| |||||||  | |||||    |||||||| | |||||||||||||| |||||||||||||| | ||||||||    
T  267113 gagcaagcagaagaatc-aaaatcatcaagaac--attcaagtttctttccaaaaattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 267020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 16159625 - 16159818
Alignment:
Q  158 attgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||| |||| |||||||||||    || |||| ||||||| |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  16159625 attgaagcaagctcaaacacgaaatcacagagagagaagtagaggaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcca 16159724  T
Q  254 aaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa-gatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||| ||||||||||  ||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16159725 aaa-gcaagcaaaatcatcaaaa-tcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 16159818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 16170526 - 16170719
Alignment:
Q  158 attgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||| |||| |||||||||||    || |||| ||||||| |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  16170526 attgaagcaagctcaaacacgaaatcacagagagagaagtagaggaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcca 16170625  T
Q  254 aaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa-gatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||| ||||||||||  ||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16170626 aaa-gcaagcaaaatcatcaaaa-tcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 16170719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 5799514 - 5799707
Alignment:
Q  158 attgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||| |||| |||||||||||    || |||||||||||| |||||||||| ||||  |||||||||||||||||||||||||||||     
T  5799514 attgaagcaagctcaaacacgaaatcacagagagagaagtagagaaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc- 5799612  T
Q  254 aaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa-gatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||  ||| ||||||| |||||||| |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5799613 aaaagcaagcaaaatcatc-aaaatcatcaagaacaaaatcaaggttttccgaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 5799707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 16963277 - 16963163
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaacca 333  Q
    |||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16963277 accgatttattttcggtccaaagaacaagcaaaagaatcaaaaaccagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaacca 16963178  T
Q  334 aaaccttaggtaaaa 348  Q
    |||||||||||||||    
T  16963177 aaaccttaggtaaaa 16963163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 27797631 - 27797824
Alignment:
Q  158 attgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||| |||| |||||||||||    || |||| ||||||| |||||||||| ||||  |||||||||||||||||||||||||||||     
T  27797631 attgaagcaagctcaaacacgaaatcacagagagagaagtagaggaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc- 27797729  T
Q  254 aaaagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||  ||| ||||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27797730 aaaagcaagcaaaatcatc-aaaatcatcaagaacagaatcaaagttttccaaagatttcctccgttaaaggtttcaaccaaaaccttaggtaaaa 27797824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 27812720 - 27812913
Alignment:
Q  158 attgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||| |||| |||||||||||    || |||| ||||||| |||||||||| ||||  |||||||||||||||||||||||||||||     
T  27812720 attgaagcaagctcaaacacgaaatcacagagagagaagtagaggaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc- 27812818  T
Q  254 aaaagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||  ||| ||||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27812819 aaaagcaagcaaaatcatc-aaaatcatcaagaacagaatcaaagttttccaaagatttcctccgttaaaggtttcaaccaaaaccttaggtaaaa 27812913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 39043026 - 39042832
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagagaa----gcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    ||||||||||||||||||| |||||||||||||||    | || ||||||| | |||||||||| ||||| |||||||||||||||||||||||||||||    
T  39043026 cattgaagcaagctcaagctcgtaatcacagagaaagaagtagtgaaagaaccagagaagatgaagaagatgaaccggtaaaccgatttattttcggtcc 39042927  T
Q  253 aaaaagca-agcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||| | || | |||||  |||||   ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39042926 aaagaacagatcaaaatcatcaat--tcatcaagaacagaatcaagttttccaaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaa 39042832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 39058360 - 39058166
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagagaa----gcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    ||||||||||||||||||| |||||||||||||||    | || ||||||| | |||||||||| ||||| |||||||||||||||||||||||||||||    
T  39058360 cattgaagcaagctcaagctcgtaatcacagagaaagaagtagtgaaagaaccagagaagatgaagaagatgaaccggtaaaccgatttattttcggtcc 39058261  T
Q  253 aaaaagca-agcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||| | || | |||||  |||||   ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39058260 aaagaacagatcaaaatcatcaat--tcatcaagaacagaatcaagttttccaaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaa 39058166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 5799319 - 5799478
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| |||||||||||||||||||||||||   ||  |||||||||||||||  |||  |||||||||||||||||||||||||||||||||||||    
T  5799319 caagaaca-aaaaccctaaccgttttccagaaactgaaaaattcatcagaatcaaccatttccgcatcaatcctcagagattcgtgtgaatcttcatcac 5799417  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  5799418 cggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 5799478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 32043644 - 32043829
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  32043644 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 32043739  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  32043740 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 32043829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 32058840 - 32059025
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  32058840 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 32058935  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  32058936 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 32059025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 16820495 - 16820310
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||| ||||||||||||||||||||||| |||||    
T  16820495 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccagtaaaccgatttattttcggtcc-aaaag 16820400  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag--atttccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||   |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  16820399 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttttccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 16820310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 34272991 - 34273150
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||    ||  |||||||||| |||||   |||  |||||||||||| ||||||||||||||||||||||    
T  34272991 caagaacacaaaaccctaaccgttt-ccagaaattaaaaagttcatcagaaatcaactaatttcacatcaatcctcaaagattcgtgtgaatcttcatca 34273089  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  34273090 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 34273150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 34299998 - 34300157
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||    ||  ||||||| || |||||   |||  |||||||||||||||||||||||||||||||||||    
T  34299998 caagaacacaaaaccctaaccgttt-ccagaaattaaaaagttcatcataaatcaactaatttcacatcaatcctcagagattcgtgtgaatcttcatca 34300096  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  34300097 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 34300157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 15707712 - 15707549
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| ||||||| |  ||  |||||||||| |||||   |||  |||||||||||||||||||||||||||||||||||    
T  15707712 caagaacacaaaaccctaaccgttt-ccagaaatcaaaaagttcatcagaaatcaactaatttctcatcaatcctcagagattcgtgtgaatcttcatca 15707614  T
Q  117 ccggattgaagattttcctgcaattcc----aagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| ||||||||||||    |||||||| |||||||||||||||||||||||||    
T  15707613 ctggattgaagattctcctgcaattccaattaagtgcgagctcacattgaagcaagctcaagcac 15707549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 34184460 - 34184304
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||    
T  34184460 caagaaca-aaaaccctaaccgttttctagaaaccctaattttcatcagaatcaacattttttggatcaattctcagagattctgtg-gaatcttcatca 34184363  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  34184362 ctgaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 34184304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 4729236 - 4729141
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  4729236 catcaatcctcagagattcgtgtgaatcttcatcactggattggagatttccctacaattccaagtgcgagctcacattgaagcaagctcaagcac 4729141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 37943167 - 37943065
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  37943167 ttttcgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaag 37943068  T
Q  175 cac 177  Q
    |||    
T  37943067 cac 37943065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 16820628 - 16820532
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  16820628 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 16820532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 16875781 - 16875685
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  16875781 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 16875685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 32043511 - 32043607
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  32043511 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 32043607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 32058707 - 32058803
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  32058707 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 32058803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 28273858 - 28273953
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||||| ||||| |||||||||||||||||||    
T  28273858 catcaatcctcagagattcgtgtgaatcttcatcactggattggagatttccctacaattccaagtgcgagctcacgttgaagcaagctcaagcac 28273953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 34802084 - 34801991
Alignment:
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa-gatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34802084 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 34801991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 22919266 - 22919154
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||   ||||| ||||| |||||||||||||||||||||||||||||    
T  22919266 accgatttattttcggtccaaga-gcaagcaaaggaatcaaaaaccagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaacc 22919170  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  22919169 aaaaccttaggtaaaa 22919154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 22932376 - 22932264
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||   ||||| ||||| |||||||||||||||||||||||||||||    
T  22932376 accgatttattttcggtccaaga-gcaagcaaaggaatcaaaaaccagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaacc 22932280  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  22932279 aaaaccttaggtaaaa 22932264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 37368815 - 37368911
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  37368815 catcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 37368911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 37386649 - 37386745
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  37386649 catcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 37386745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 25910876 - 25910719
Alignment:
Q  18 caagaacacaaaaccctaaccgtttt-ccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatc 115  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||| ||| |||||||||||    
T  25910876 caagaaca-aaaaccctaaccgtttttccagaaaccctaattttcatcagaatcaacattttttagatcaattctcagagattctgtg-gaatcttcatc 25910779  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    || | |||||   |||  ||||||||||||  |||| ||| ||||||||||| |||||||    
T  25910778 acagaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaaactcaagc 25910719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 161 - 337
Target Start/End: Original strand, 34273182 - 34273352
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||| |     
T  34273182 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtccaga- 34273280  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaac 337  Q
       |||       ||||||||||| |||||||||||||||| |||||| |||||| ||| || ||| ||||||||||||||    
T  34273281 --gaag-------atcaaaaatcatcaagaacagaatcaagttttccagagattttctctatcaaaagtttcaaccaaaac 34273352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 39043161 - 39043059
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||| || ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  39043161 tttttacatcaatcctcagagattcgtgtgaatcttcatcactggattggagaattatcctacaattcaaagtgcgagctcacattgaagcaagctcaag 39043062  T
Q  175 cac 177  Q
    |||    
T  39043061 cac 39043059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 39058495 - 39058393
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||| || ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  39058495 tttttacatcaatcctcagagattcgtgtgaatcttcatcactggattggagaattatcctacaattcaaagtgcgagctcacattgaagcaagctcaag 39058396  T
Q  175 cac 177  Q
    |||    
T  39058395 cac 39058393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 34152983 - 34153140
Alignment:
Q  18 caagaacacaaaaccctaaccgtttt-ccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatc 115  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||  ||||||||||| ||| |||||||||||    
T  34152983 caagaaca-aaaaccctaaccgtttttccagaaaccctaattttcatcagaatcaacattttttagatcaactctcagagattctgtg-gaatcttcatc 34153080  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    || | |||||   |||  ||||||||||||  |||| ||| ||||||||||| |||||||    
T  34153081 acagaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaaactcaagc 34153140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 34163839 - 34163996
Alignment:
Q  18 caagaacacaaaaccctaaccgtttt-ccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatc 115  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||  ||||||||||| ||| |||||||||||    
T  34163839 caagaaca-aaaaccctaaccgtttttccagaaaccctaattttcatcagaatcaacattttttagatcaactctcagagattctgtg-gaatcttcatc 34163936  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    || | |||||   |||  ||||||||||||  |||| ||| ||||||||||| |||||||    
T  34163937 acagaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaaactcaagc 34163996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 13820419 - 13820263
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||| || ||| ||||||||||| ||| ||||||||||||    
T  13820419 caagaacacaaaaccctaaccgttt-ccagaaaccctaaaattcatcagaatcaacaatttttggattaattctcagagattctgtg-gaatcttcatca 13820322  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  |||||||||| |  |||| ||| |||||||||||||||||||    
T  13820321 ctgaattgatcgtttctctgcaattcctaacgcgagctcgcattgaagcaagctcaagc 13820263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 34280884 - 34280997
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga-tttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||  | ||||| |||||||||| |||||||||  ||| |||||||||    
T  34280884 accgatttattttcggtccaaaaagcaagcagaagaatcaaaaatcatcaagaac--attcaagttttccaaagattttcctccaccaaaagtttcaacc 34280981  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||| | ||||||||    
T  34280982 aaaacttcaggtaaaa 34280997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 337
Target Start/End: Original strand, 34300189 - 34300359
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||| |     
T  34300189 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtccagag 34300288  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaac 337  Q
    |         ||| |||||||||| |||||||| ||||||| |||||| |||||| ||| || |||  |||||||||||||    
T  34300289 a---------aga-tcaaaaatcatcaagaacataatcaagttttccagagattttctctatcaaaactttcaaccaaaac 34300359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 27114450 - 27114607
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt-ttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatc 115  Q
    |||||||| ||||||||||||||||||||||||| | ||   |||||||||||||||| |||||| |||||| ||||||||||| ||| |||||||||||    
T  27114450 caagaaca-aaaaccctaaccgttttccagaaactcaaaaagttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatc 27114547  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | || |||||  ||||  ||||||||| ||  |||| ||| |||||||||||||||||||    
T  27114548 atcgaattgatcatttctctgcaattcaaaacgcgagctcgcattgaagcaagctcaagc 27114607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 27125415 - 27125572
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt-ttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatc 115  Q
    |||||||| ||||||||||||||||||||||||| | ||   |||||||||||||||| |||||| |||||| ||||||||||| ||| |||||||||||    
T  27125415 caagaaca-aaaaccctaaccgttttccagaaactcaaaaagttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatc 27125512  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | || |||||  ||||  ||||||||| ||  |||| ||| |||||||||||||||||||    
T  27125513 atcgaattgatcatttctctgcaattcaaaacgcgagctcgcattgaagcaagctcaagc 27125572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 16875648 - 16875591
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16875648 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagatga 16875591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 35762565 - 35762723
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt-ttcatcagaatcaaca-ttttttgcatcaatcctcagagattcgtgtg-aatcttcat 114  Q
    |||||||| ||||||||||||||||||||||||| | ||   |||||||||||||||| ||||||| |||||| ||||||||||| |||| |||||||||    
T  35762565 caagaaca-aaaaccctaaccgttttccagaaactcaaaaagttcatcagaatcaacaattttttggatcaattctcagagattc-tgtggaatcttcat 35762662  T
Q  115 caccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    || || |||||  ||||  ||||||||| ||  |||| ||| |||||||||||||||||||    
T  35762663 catcgaattgatcatttctctgcaattcaaaacgcgagctcgcattgaagcaagctcaagc 35762723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 15707517 - 15707421
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||||||||||    || || ||||||||||||||||||||  ||   ||||||||||||||||||||||||||||||    
T  15707517 gaagcaagctcaagcacgtaatcacagagagagaagtagggaaagaatcggagaagatgaataaacagaaccggtaaaccgatttattttcggtcca 15707421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 37677156 - 37677062
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaa-gattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| ||||||||||||| |||||||||||||| | |||||  |||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  37677156 atcaattctcagagattcgtatgaatcttcatcactgaattgatcgattctc-tgcaattccaagtgcgagctcacattgaagcaagctcaagcac 37677062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 37692421 - 37692327
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaa-gattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| ||||||||||||| |||||||||||||| | |||||  |||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  37692421 atcaattctcagagattcgtatgaatcttcatcactgaattgatcgattctc-tgcaattccaagtgcgagctcacattgaagcaagctcaagcac 37692327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 37707685 - 37707591
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaa-gattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| ||||||||||||| |||||||||||||| | |||||  |||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  37707685 atcaattctcagagattcgtatgaatcttcatcactgaattgatcgattctc-tgcaattccaagtgcgagctcacattgaagcaagctcaagcac 37707591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 35762806 - 35762879
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  35762806 accgatttattttcggtccaaagaacaagcaaaagaatcaaaaa-cagcaagaacagaatcaagttttccgaaga 35762879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 13820164 - 13820096
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||||||||||| ||| |||||||||||||||||||||    
T  13820164 accgatttattttcggtccaaagaacaagcagaagaatcaaaactcatcaagaacagaatcaagatttc 13820096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 22919476 - 22919361
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcaca 158  Q
    |||||||||||||||| |||||| |||||| |||||||||||   ||||||||||||| || |||||  ||| | ||||||||||||  |||| ||| ||    
T  22919476 ttcatcagaatcaacagtttttggatcaattctcagagattctgttgaatcttcatcatcgaattgatcattct-ctgcaattccaaacgcgagctcgca 22919378  T
Q  159 ttgaagcaagctcaagc 175  Q
    |||||||||||||||||    
T  22919377 ttgaagcaagctcaagc 22919361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 22932586 - 22932471
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcaca 158  Q
    |||||||||||||||| |||||| |||||| |||||||||||   ||||||||||||| || |||||  ||| | ||||||||||||  |||| ||| ||    
T  22932586 ttcatcagaatcaacagtttttggatcaattctcagagattctgttgaatcttcatcatcgaattgatcattct-ctgcaattccaaacgcgagctcgca 22932488  T
Q  159 ttgaagcaagctcaagc 175  Q
    |||||||||||||||||    
T  22932487 ttgaagcaagctcaagc 22932471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 16963525 - 16963370
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    ||||||||| |||||||||||||||| |||||| |  ||||  |||||||||||||| || ||| |||||| ||||||||||| ||| ||| ||||||||    
T  16963525 caagaacaccaaaccctaaccgtttttcagaaatcaaaatt--catcagaatcaacaattgttggatcaattctcagagattctgtg-gaaccttcatca 16963429  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
      | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  16963428 ttgaattgatcgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 16963370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 19407535 - 19407489
Alignment:
Q  302 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  19407535 ccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 19407489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 19422535 - 19422489
Alignment:
Q  302 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  19422535 ccaaagttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 19422489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 37677024 - 37676929
Alignment:
Q  162 aagcaagctcaagcacgtaatcacagaga---agca-gagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||||||||||||||||   || | |||||||||||||||||||||| |||    | || ||||||||||||||||||||||||    
T  37677024 aagcaagctcaagcacgtaatcacagagagagagaaagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtcca 37676929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 37692289 - 37692194
Alignment:
Q  162 aagcaagctcaagcacgtaatcacagaga---agca-gagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||||||||||||||||   || | |||||||||||||||||||||| |||    | || ||||||||||||||||||||||||    
T  37692289 aagcaagctcaagcacgtaatcacagagagagagaaagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtcca 37692194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 37707553 - 37707458
Alignment:
Q  162 aagcaagctcaagcacgtaatcacagaga---agca-gagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||||||||||||||||   || | |||||||||||||||||||||| |||    | || ||||||||||||||||||||||||    
T  37707553 aagcaagctcaagcacgtaatcacagagagagagaaagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtcca 37707458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 4729104 - 4729012
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaagca 260  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||| |||    | || ||||||||||||||||||||| |||||||||    
T  4729104 gaagcaagctcaagcacgtaatcacagagaa--------agaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggttcaaaaagca 4729013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 348
Target Start/End: Complemental strand, 16875571 - 16875532
Alignment:
Q  309 tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16875571 tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 16875532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 28273990 - 28274081
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaagca 260  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||| |||    | || ||||||||||||||||||||| |||||||||    
T  28273990 gaagcaagctcaagcacgtaatcacagagaa--------agaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggttcaaaaagca 28274081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 13927641 - 13927592
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  || ||||||| ||||||||||||||||||||||||||||    
T  13927641 tttccaaagcatttctccattgaaggtttcaaccaaaaccttaggtaaaa 13927592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 13942837 - 13942788
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  || ||||||| ||||||||||||||||||||||||||||    
T  13942837 tttccaaagcatttctccattgaaggtttcaaccaaaaccttaggtaaaa 13942788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 34280635 - 34280667
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  34280635 caagaacacaaaaccctaaccgttttccagaaa 34280667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 31869971 - 31870013
Alignment:
Q  75 ttttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||    
T  31869971 tttttcgcatcaattctcagagattcgtatgaatcttcatcac 31870013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 31885164 - 31885206
Alignment:
Q  75 ttttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||    
T  31885164 tttttcgcatcaattctcagagattcgtatgaatcttcatcac 31885206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 31870129 - 31870186
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggt 250  Q
    |||||||||||||||||||||||| |||    | || |||||||||||||||||||||    
T  31870129 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggt 31870186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 31885322 - 31885379
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggt 250  Q
    |||||||||||||||||||||||| |||    | || |||||||||||||||||||||    
T  31885322 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggt 31885379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 4518981 - 4519131
Alignment:
Q  27 aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaa 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4518981 aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggactgaa 4519080  T
Q  127 gattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  4519081 gattttcctgcaattccaagtgcgagctcgcattgaagcaagctcaagcac 4519131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 4534168 - 4534318
Alignment:
Q  27 aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaa 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4534168 aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggactgaa 4534267  T
Q  127 gattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  4534268 gattttcctgcaattccaagtgcgagctcgcattgaagcaagctcaagcac 4534318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 29566748 - 29566937
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| ||    
T  29566748 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aa 29566843  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| |||||||||  |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29566844 aagcaagcagaagaatcaaggatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 29566937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 29582155 - 29582344
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| ||    
T  29582155 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aa 29582250  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatc-aagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| |||||||||  |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29582251 aagcaagcagaagaatcaaggatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 29582344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 29566556 - 29566715
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaa-ttttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29566556 caagaaca-aaaaccctaaccgttttccagaaaccctaaattttcatcagaatcaacattttctgcatcaatcctcagagattcgtgtgaatcttcatca 29566654  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  29566655 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 29566715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 29581963 - 29582122
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaa-ttttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29581963 caagaaca-aaaaccctaaccgttttccagaaaccctaaattttcatcagaatcaacattttctgcatcaatcctcagagattcgtgtgaatcttcatca 29582061  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  29582062 ctggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 29582122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 34455504 - 34455311
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagagaa----gcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    ||||||||||||||||| |||| ||||||||||||    | |||||||||||| |||||||||| ||||  |||||||||||||||||||||||||||||    
T  34455504 cattgaagcaagctcaaacacgaaatcacagagaaagaagtagagaaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc 34455405  T
Q  253 aaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||| ||||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34455404 aaaa-gcaagcaaaatcatcaaaa-tcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 34455311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 34469792 - 34469599
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagagaa----gcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    ||||||||||||||||| |||| ||||||||||||    | |||||||||||| |||||||||| ||||  |||||||||||||||||||||||||||||    
T  34469792 cattgaagcaagctcaaacacgaaatcacagagaaagaagtagagaaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc 34469693  T
Q  253 aaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||| ||||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34469692 aaaa-gcaagcaaaatcatcaaaa-tcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 34469599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 34455698 - 34455539
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  34455698 caagaaca-aaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 34455600  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| | |||||| |||||||||||||||||||||||||    
T  34455599 cggattgaagaattctcctacaattcaaggtgcgagctcacattgaagcaagctcaagcac 34455539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 34469986 - 34469827
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  34469986 caagaaca-aaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 34469888  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| | |||||| |||||||||||||||||||||||||    
T  34469887 cggattgaagaattctcctacaattcaaggtgcgagctcacattgaagcaagctcaagcac 34469827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 7986420 - 7986605
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  7986420 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 7986515  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  7986516 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 7986605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 30564378 - 30564193
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  30564378 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 30564283  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  30564282 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 30564193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 30549115 - 30548929
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  30549115 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 30549020  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt---ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||   ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  30549019 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 30548929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 2651432 - 2651331
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  2651432 tttttgcatcaatcctcagagattcgtgtgaatcttcatcactggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagc 2651333  T
Q  176 ac 177  Q
    ||    
T  2651332 ac 2651331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 27038049 - 27038206
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||    
T  27038049 caagaacaaaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttggatcaattctcagagattctgtg-gaatcttcatca 27038147  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  27038148 ctgaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 27038206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 29543142 - 29543243
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  29543142 tttttgcatcaatcctcagaaattcgtgtgaatcttcatcactggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagc 29543241  T
Q  176 ac 177  Q
    ||    
T  29543242 ac 29543243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 29558552 - 29558653
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  29558552 tttttgcatcaatcctcagaaattcgtgtgaatcttcatcactggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagc 29558651  T
Q  176 ac 177  Q
    ||    
T  29558652 ac 29558653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 31544346 - 31544447
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  31544346 tttttgcatcaatcctcagaaattcgtgtgaatcttcatcactggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagc 31544445  T
Q  176 ac 177  Q
    ||    
T  31544446 ac 31544447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 27066389 - 27066546
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||    
T  27066389 caagaacaaaaaaccctaaccgttttctagaaaccctaattttcatcagaatcaacattttttggatcaattctcagagattctgtg-gaatcttcatca 27066487  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  27066488 ctgaattgagcgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 27066546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 29495140 - 29495253
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  29495140 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 29495235  T
Q  259 caagcaaaagaatcaaaa 276  Q
    |||||||||  |||||||    
T  29495236 caagcaaaatcatcaaaa 29495253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 29510478 - 29510591
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  29510478 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 29510573  T
Q  259 caagcaaaagaatcaaaa 276  Q
    |||||||||  |||||||    
T  29510574 caagcaaaatcatcaaaa 29510591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 30549247 - 30549152
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||||||||    
T  30549247 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 30549152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 267 - 348
Target Start/End: Original strand, 4519250 - 4519331
Alignment:
Q  267 agaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4519250 agaatcaaaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 4519331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 267 - 348
Target Start/End: Original strand, 4534437 - 4534518
Alignment:
Q  267 agaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4534437 agaatcaaaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 4534518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 18938823 - 18938918
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  18938823 catcaatcctcagagattcgtgtgaatcttcatcactggattggagatttccctacaattccaagtgcgagctcacattgaagcaagctcaagcac 18938918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 30977261 - 30977166
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  30977261 catcaatcctcagagattcgtgtgaatcttcatcactggattggagatttccctacaattccaagtgcgagctcacattgaagcaagctcaagcac 30977166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 7986287 - 7986383
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  7986287 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 7986383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 30564511 - 30564415
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  30564511 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 30564415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 18938289 - 18938384
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  18938289 catcaatcctcagagattcgtgtgaaccttcatcactggattggagatttccctacaattccaagtgcgagctcacattgaagcaagctcaagcac 18938384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 16996578 - 16996734
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  16996578 caagaacacaaaaccctaaccgttt-ccagaaaccctaaaattcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatca 16996675  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  16996676 ctgaattgatcgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 16996734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 27211697 - 27211853
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  27211697 caagaacacaaaaccctaaccgttt-ccagaaaccctaaaattcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatca 27211794  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | ||||    ||| |||||||||||||  |||| ||| |||||||||||||||||||    
T  27211795 ctgaattggtcgtttccctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 27211853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 27237531 - 27237375
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  27237531 caagaacacaaaaccctaaccgttt-ccagaaaccctaaaattcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatca 27237434  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | ||||    ||| |||||||||||||  |||| ||| |||||||||||||||||||    
T  27237433 ctgaattggtcgtttccctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 27237375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 27308859 - 27308703
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  27308859 caagaacacaaaaccctaaccgttt-ccagaaaccctaaaattcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatca 27308762  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | ||||    ||| |||||||||||||  |||| ||| |||||||||||||||||||    
T  27308761 ctgaattggtcgtttccctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 27308703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 29495011 - 29495103
Alignment:
Q  86 aatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  29495011 aatcctcagagattcgtgtgaatcttcatcaccggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 29495103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 29510349 - 29510441
Alignment:
Q  86 aatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  29510349 aatcctcagagattcgtgtgaatcttcatcaccggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 29510441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 27017106 - 27017219
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatc-agcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaac 331  Q
    ||||||||||||||||||||| || |||||||| |||||||||| | ||||||||||   ||||| ||||| ||||||||||||||||||||||||||||    
T  27017106 accgatttattttcggtccaagaa-caagcaaaggaatcaaaaaaccagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaac 27017202  T
Q  332 caaaaccttaggtaaaa 348  Q
    |||||||||||||||||    
T  27017203 caaaaccttaggtaaaa 27017219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 27001599 - 27001713
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatc--agcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaa 330  Q
    ||||||||||||||||||||| || |||||||| |||||||||| |  ||||||||||   ||||| ||||| |||||||||||||||||||||||||||    
T  27001599 accgatttattttcggtccaagaa-caagcaaaggaatcaaaaaaccaagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaa 27001695  T
Q  331 ccaaaaccttaggtaaaa 348  Q
    ||||||||||||||||||    
T  27001696 ccaaaaccttaggtaaaa 27001713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 348
Target Start/End: Original strand, 29543274 - 29543454
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||| |||||||||||||||||||||||| |     
T  29543274 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaatagaaccagtaaaccgatttattttcggtccaga- 29543372  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
       |||       ||||||||||| |||||||  | ||||| |||||||||| |||||||||| ||| |||||||||||||| | ||||||||    
T  29543373 --gaag-------atcaaaaatcatcaagaac--attcaagttttccaaagattttcctccatcaaaagtttcaaccaaaacttcaggtaaaa 29543454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 348
Target Start/End: Original strand, 29558684 - 29558864
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||| |||||||||||||||||||||||| |     
T  29558684 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaatagaaccagtaaaccgatttattttcggtccaga- 29558782  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
       |||       ||||||||||| |||||||  | ||||| |||||||||| |||||||||| ||| |||||||||||||| | ||||||||    
T  29558783 --gaag-------atcaaaaatcatcaagaac--attcaagttttccaaagattttcctccatcaaaagtttcaaccaaaacttcaggtaaaa 29558864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 348
Target Start/End: Original strand, 31544478 - 31544658
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||| |||||||||||||||||||||||| |     
T  31544478 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaatagaaccagtaaaccgatttattttcggtccaga- 31544576  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
       |||       ||||||||||| |||||||  | ||||| |||||||||| |||||||||| ||| |||||||||||||| | ||||||||    
T  31544577 --gaag-------atcaaaaatcatcaagaac--attcaagttttccaaagattttcctccatcaaaagtttcaaccaaaacttcaggtaaaa 31544658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 2651300 - 2651204
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||| ||||||||| |||   ||||||||||||||||||||||||||||||    
T  2651300 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcgaagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca 2651204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 4452444 - 4452599
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||| |  ||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  4452444 caagaaca-aaaaccctaaccgttttccagaaa-ctaaaagttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatca 4452540  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
     || |||||  ||||  ||||||||| ||  |||| ||| |||||||||||||||||||    
T  4452541 tcgaattgatcatttctctgcaattcaaaacgcgagctcgcattgaagcaagctcaagc 4452599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 27211952 - 27212026
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  27211952 accgatttattttcggtccaaagaacaagcagaagaatcaaaaatcatcaagaacagaatcaagatttccgaaga 27212026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 27237276 - 27237202
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  27237276 accgatttattttcggtccaaagaacaagcagaagaatcaaaaatcatcaagaacagaatcaagatttccgaaga 27237202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 27308604 - 27308530
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  27308604 accgatttattttcggtccaaagaacaagcagaagaatcaaaaatcatcaagaacagaatcaagatttccgaaga 27308530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 28978741 - 28978586
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||| |  ||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  28978741 caagaaca-aaaaccctaaccgttttccagaaa-ctaaaagttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatca 28978645  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
     || |||||  ||||  ||||||||| ||  |||| ||| |||||||||||||||||||    
T  28978644 tcgaattgatcatttctctgcaattcaaaacgcgagctcgcattgaagcaagctcaagc 28978586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 4519165 - 4519225
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  4519165 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagagtcagagaagatga 4519225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 4534352 - 4534412
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  4534352 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagagtcagagaagatga 4534412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 16996833 - 16996901
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||||||||||| ||| |||||||||||||||||||||    
T  16996833 accgatttattttcggtccaaagaacaagcagaagaatcaaaactcatcaagaacagaatcaagatttc 16996901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 26782968 - 26783036
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||||| ||||    
T  26782968 accgatttattttcggtccaaagaacaagcagaagcatcaaaaatcagcaagaacagaatcaagttttc 26783036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 26794940 - 26795008
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||||| ||||    
T  26794940 accgatttattttcggtccaaagaacaagcagaagcatcaaaaatcagcaagaacagaatcaagttttc 26795008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 27478957 - 27479025
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||||| ||||    
T  27478957 accgatttattttcggtccaaagaacaagcagaagcatcaaaaatcagcaagaacagaatcaagttttc 27479025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 27494211 - 27494279
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||||| ||||    
T  27494211 accgatttattttcggtccaaagaacaagcagaagcatcaaaaatcagcaagaacagaatcaagttttc 27494279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 27620307 - 27620261
Alignment:
Q  302 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27620307 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 27620261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 27635917 - 27635871
Alignment:
Q  302 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27635917 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 27635871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 26107433 - 26107384
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  26107433 tttccaaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaa 26107384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 26122665 - 26122616
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  26122665 tttccaaagaatttctccattaaaggtttcaaccaaaaccttaggtaaaa 26122616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 27001413 - 27001504
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||| ||||||||||||| |||||||||||||| | |||||  ||| | ||||||||||||  |||| ||| |||||||||||||||||||    
T  27001413 atcaattctcagagattcgtatgaatcttcatcactgaattgatcattct-ctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 27001504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 27016920 - 27017011
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||| ||||||||||||| |||||||||||||| | |||||  ||| | ||||||||||||  |||| ||| |||||||||||||||||||    
T  27016920 atcaattctcagagattcgtatgaatcttcatcactgaattgatcattct-ctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 27017011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 5245694 - 5245726
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  5245694 caagaacacaaaaccctaaccgttttccagaaa 5245726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 13515378 - 13515318
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||    
T  13515378 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtcca 13515318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 13526281 - 13526221
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    |||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||    
T  13526281 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtcca 13526221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 27478707 - 27478739
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  27478707 caagaacacaaaaccctaaccgttttccagaaa 27478739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 27493961 - 27493993
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  27493961 caagaacacaaaaccctaaccgttttccagaaa 27493993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 2651193 - 2651119
Alignment:
Q  273 aaaaatcagcaagaacagaatcaagatttccaaagattt-cctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||| ||||||||   ||||| ||||||||||||| ||||||| ||| |||||||||||||| | ||||||||    
T  2651193 aaaaatcatcaagaacat--tcaagttttccaaagattttcctccatcaaaagtttcaaccaaaacttcaggtaaaa 2651119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 13515532 - 13515440
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattga-agattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||| ||||||||||||| |||||||||||||| | |||||  |||| | ||||||||||||  |||| ||| |||  ||||||||||||||    
T  13515532 atcaattctcagagattcgtatgaatcttcatcactgaattgattgattct-ctgcaattccaaacgcgagctcgcatcaaagcaagctcaagc 13515440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 13526435 - 13526343
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattga-agattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||| ||||||||||||| |||||||||||||| | |||||  |||| | ||||||||||||  |||| ||| |||  ||||||||||||||    
T  13526435 atcaattctcagagattcgtatgaatcttcatcactgaattgattgattct-ctgcaattccaaacgcgagctcgcatcaaagcaagctcaagc 13526343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 190
Target Start/End: Complemental strand, 30977129 - 30977100
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga 190  Q
    ||||||||||||||||||||||||||||||    
T  30977129 gaagcaagctcaagcacgtaatcacagaga 30977100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 7e-71; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 14728086 - 14728243
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14728086 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacatttt-tgcatcaatcctcagagattcgtgtgaatcttcatcac 14728183  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  14728184 cggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagcttaagcac 14728243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 14728277 - 14728469
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14728277 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagatgaagaagaggaaccggtaaaccgatttattttcggtccaaa 14728376  T
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa---gatttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||| ||||||| |||||||  | ||||     |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  14728377 aagcaagcagaagaatc-aaaatcatcaagaac--attcaaacttctttccaaagattttcctccattaaa-gtttcaaccaaaacttcaggtaaaa 14728469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 19367046 - 19367240
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    ||||||||||||||||||||||||||||||||||    || |||||||||||| ||||||||||  |||  |||||||||||||||||||||||||||||    
T  19367046 cattgaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcagagaagatgaaaaagctgaaccggtaaaccgatttattttcggtcc 19367145  T
Q  253 aaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||| | ||| || ||||||||||| ||| |||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  19367146 aaagaacaaacagaagaatcaaaa-tcatcaagaatagcatcaagatttccaaagattttctccattaaaggtttcaaccaaaacctcaggtaaaa 19367240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 54842508 - 54842700
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  54842508 cattgaagcaagctcaagcacgtgatcacagagaagtagagaaagaatcagagaagatgaagaagatgaaccggtaaaccgatttattttcggtccaaaa 54842607  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||| ||| ||| ||||||| |||||||  | |||||    |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  54842608 agcaagcagaaggatc-aaaatcatcaagaac--attcaagtttctttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 54842700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 20329710 - 20329609
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20329710 tttttgcatcaatcctcagagattcgtgtgaatcttcatcactggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagc 20329611  T
Q  176 ac 177  Q
    ||    
T  20329610 ac 20329609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 21963551 - 21963736
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  21963551 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 21963646  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  21963647 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 21963736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 21978801 - 21978986
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  21978801 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 21978896  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  21978897 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 21978986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 34195696 - 34195538
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    ||||||||||||||||||||||||| |||||||    ||  |||||||||||||||   |||  ||||||||||||||||||||||||||||||||||||    
T  34195696 caagaacacaaaaccctaaccgttt-ccagaaatttcaaaattcatcagaatcaacgaatttcacatcaatcctcagagattcgtgtgaatcttcatcac 34195598  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
     |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  34195597 tggattgaagattctcctgcaattctaagtgcgagctcacattgaagcaagctcaagcac 34195538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 43150153 - 43150254
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  43150153 tttttgcatcaatcctcagaaattcgtgtgaatcttcatcactggattgaagattctcctgcaattccaagtgcgagctcacattgaagcaagctcaagc 43150252  T
Q  176 ac 177  Q
    ||    
T  43150253 ac 43150254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 33664947 - 33664762
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  33664947 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 33664852  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagatt--tccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| ||  |||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  33664851 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttctccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 33664762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 33683759 - 33683574
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  33683759 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 33683664  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagatt--tccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| ||  |||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  33683663 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttctccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 33683574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 18791932 - 18791776
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||    
T  18791932 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttggatcaattctcagagattctgtg-gaatcttcatca 18791835  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  18791834 ctgaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 18791776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 18806560 - 18806404
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||    
T  18806560 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttggatcaattctcagagattctgtg-gaatcttcatca 18806463  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  18806462 ctgaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 18806404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 30747577 - 30747763
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  30747577 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 30747672  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||    |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  30747673 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 30747763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 30762882 - 30763068
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  30762882 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 30762977  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||    |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  30762978 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 30763068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 54827290 - 54827473
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||         |||||||||||||||||||||||||||||||||    
T  54827290 cattgaagcaagctcaagcacgtgatcacagagaagtagagaaagaatcagagaagat---------gaaccggtaaaccgatttattttcggtccaaaa 54827380  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||| ||| ||| ||||||| |||||||  | |||||    |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  54827381 agcaagcagaaggatc-aaaatcatcaagaac--attcaagtttctttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 54827473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 21963418 - 21963514
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  21963418 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 21963514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 21978668 - 21978764
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  21978668 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 21978764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 763259 - 763073
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    ||||||||||||||||||||||||||||||||||    || ||| |||||||| |||||||||| |||  ||||||||||||||||||||||||||||||    
T  763259 cattgaagcaagctcaagcacgtaatcacagagagagaagtagataaagaatcagagaagatgaagaaacggaaccggtaaaccgatttattttcggtcc 763160  T
Q  253 aaaaagcaagcaaaagaatcaaa-aatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    | |    |||       ||||||  |||| || ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  763159 aga---gaag-------atcaaaggatcatcaggaacagaatcaaattttccgaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaa 763073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 19366909 - 19367011
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  19366909 ttttcgcatcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaag 19367008  T
Q  175 cac 177  Q
    |||    
T  19367009 cac 19367011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 39845940 - 39846096
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||| ||||||||||| ||| ||||||||||||    
T  39845940 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcattagaatcaacattttttagatcaattctcagagattctgtg-gaatcttcatca 39846037  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | | |||||   |||  ||||||||||||  |||| ||| ||||||||||| |||||||    
T  39846038 cagaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaaactcaagc 39846096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 54827155 - 54827257
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  54827155 tttttacatcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattatcctacaattcaaagtgcgagctcacattgaagcaagctcaag 54827254  T
Q  175 cac 177  Q
    |||    
T  54827255 cac 54827257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 54842373 - 54842475
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  54842373 tttttacatcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattatcctacaattcaaagtgcgagctcacattgaagcaagctcaag 54842472  T
Q  175 cac 177  Q
    |||    
T  54842473 cac 54842475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 30747445 - 30747541
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  30747445 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagaattcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 30747541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 30762750 - 30762846
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  30762750 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagaattcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 30762846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 33683891 - 33683795
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  33683891 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagaattcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 33683795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 33665079 - 33664984
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagca 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||| ||||||||||||||||||||||||    
T  33665079 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagaattcccctacaattcaaagtgcgagctcacattgaagcaagctcaagca 33664984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 39859550 - 39859707
Alignment:
Q  18 caagaacacaaaaccctaaccgtttt-ccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatc 115  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||| ||| |||||||||||    
T  39859550 caagaaca-aaaaccctaaccgtttttccagaaaccctaattttcatcagaatcaacattttttagatcaattctcagagattctgtg-gaatcttcatc 39859647  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    || | |||||   |||  ||||||||||||  |||| ||| ||||||||||| |||||||    
T  39859648 acagaattgaccgtttctctgcaattccaaacgcgagctcgcattgaagcaaactcaagc 39859707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 20336711 - 20336638
Alignment:
Q  104 tgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20336711 tgaatcttcatcactggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 20336638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 763397 - 763301
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| | |||| |||||||| |||||||||||||||||||||||||    
T  763397 catcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattctcctacgattcaaagtgcgagctcacattgaagcaagctcaagcac 763301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 20336779 - 20336713
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattc 142  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20336779 tttttgcatcaatcctcagagattcgtgtgaatcttcatcactggattgaagattttcctgcaattc 20336713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 34180367 - 34180210
Alignment:
Q  18 caagaacacaaaaccctaaccgtttt-ccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatc 115  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||  |||||| ||||||||||| ||| |||||||||||    
T  34180367 caagaaca-aaaaccctaaccgtttttccagaaaccctaattttcatcaaaatcaacattttttagatcaattctcagagattctgtg-gaatcttcatc 34180270  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    || | ||||    |||  ||||||||||||  |||| ||| ||||||||||| |||||||    
T  34180269 acagaattggccgtttctctgcaattccaaacgcgagctcgcattgaagcaaactcaagc 34180210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 40566296 - 40566139
Alignment:
Q  18 caagaacacaaaaccctaaccgtttt-ccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatc 115  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||  |||||| ||||||||||| ||| |||||||||||    
T  40566296 caagaaca-aaaaccctaaccgtttttccagaaaccctaattttcatcaaaatcaacattttttagatcaattctcagagattctgtg-gaatcttcatc 40566199  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    || | ||||    |||  ||||||||||||  |||| ||| ||||||||||| |||||||    
T  40566198 acagaattggccgtttctctgcaattccaaacgcgagctcgcattgaagcaaactcaagc 40566139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 348
Target Start/End: Original strand, 43150285 - 43150465
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||| |||||||||||||||||||||||| |     
T  43150285 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaatagaaccagtaaaccgatttattttcggtccaga- 43150383  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
       |||       ||||||||||| |||||||  | ||||| |||||||||| |||||||||| ||| |||||||||||||| | ||||||||    
T  43150384 --gaag-------atcaaaaatcatcaagaac--attcaagttttccaaagattttcctccatcaaaagtttcaaccaaaacttcaggtaaaa 43150465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 36321632 - 36321474
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt-ttcatcagaatcaaca-ttttttgcatcaatcctcagagattcgtgtg-aatcttcat 114  Q
    |||||||| ||||||||||||||||||||||||| | ||   |||||||||||||||| ||||||| |||||| ||||||||||| |||| |||||||||    
T  36321632 caagaaca-aaaaccctaaccgttttccagaaactcaaaaagttcatcagaatcaacaattttttggatcaattctcagagattc-tgtggaatcttcat 36321535  T
Q  115 caccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    || || |||||  ||||  ||||||||| ||  |||| ||| |||||||||||||||||||    
T  36321534 catcgaattgatcatttctctgcaattcaaaacgcgagctcgcattgaagcaagctcaagc 36321474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 36335841 - 36335683
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt-ttcatcagaatcaaca-ttttttgcatcaatcctcagagattcgtgtg-aatcttcat 114  Q
    |||||||| ||||||||||||||||||||||||| | ||   |||||||||||||||| ||||||| |||||| ||||||||||| |||| |||||||||    
T  36335841 caagaaca-aaaaccctaaccgttttccagaaactcaaaaagttcatcagaatcaacaattttttggatcaattctcagagattc-tgtggaatcttcat 36335744  T
Q  115 caccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    || || |||||  ||||  ||||||||| ||  |||| ||| |||||||||||||||||||    
T  36335743 catcgaattgatcatttctctgcaattcaaaacgcgagctcgcattgaagcaagctcaagc 36335683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 34195402 - 34195328
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||| ||||| ||||    
T  34195402 accgatttattttcggtccaaagaacaagcagaagaatcaaaaatcatcaagaacagaatcaagttttccgaaga 34195328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 36321391 - 36321317
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||| ||||| ||||    
T  36321391 accgatttattttcggtccaaagaacaagcagaagaatcaaaaaccagcaagaacagaatcaagttttccgaaga 36321317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 36335600 - 36335526
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||| ||||| ||||    
T  36335600 accgatttattttcggtccaaagaacaagcagaagaatcaaaaaccagcaagaacagaatcaagttttccgaaga 36335526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 36350690 - 36350616
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||| ||||| ||||    
T  36350690 accgatttattttcggtccaaagaacaagcagaagaatcaaaaaccagcaagaacagaatcaagttttccgaaga 36350616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 20329469 - 20329420
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20329469 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 20329420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 20336498 - 20336449
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20336498 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 20336449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 36350931 - 36350773
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt-ttcatcagaatcaaca-ttttttgcatcaatcctcagagattcgtgtg-aatcttcat 114  Q
    |||||||| ||||||||||||||||||||||||| | ||   |||||||||||||||| ||||||| |||||| ||||||||||| |||| |||||||||    
T  36350931 caagaaca-aaaaccctaaccgttttccagaaactcaaaaagttcatcagaatcaacaattttttggatcaattctcagagattc-tgtggaatcttcat 36350834  T
Q  115 caccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    || || |||||  ||||  ||||||||| ||  |||| ||| |||||||| ||||||||||    
T  36350833 catcgaattgatcatttctctgcaattcaaaacgcgagctcgcattgaagtaagctcaagc 36350773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 14750819 - 14750660
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt--ttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcat 114  Q
    |||||||| ||||||||||||||||||||||||| | ||    |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||    
T  14750819 caagaaca-aaaaccctaaccgttttccagaaactcaaaaaagttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcat 14750722  T
Q  115 caccggattgaagattttcctgcaattc-caagtgcgaactcacattgaagcaagctcaagc 175  Q
    || || |||||  ||||  |||||||||  ||  |||| ||| |||||||||||||||||||    
T  14750721 catcgaattgatcatttctctgcaattcaaaaacgcgagctcgcattgaagcaagctcaagc 14750660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 14769922 - 14769763
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt--ttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcat 114  Q
    |||||||| ||||||||||||||||||||||||| | ||    |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||    
T  14769922 caagaaca-aaaaccctaaccgttttccagaaactcaaaaaagttcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcat 14769825  T
Q  115 caccggattgaagattttcctgcaattc-caagtgcgaactcacattgaagcaagctcaagc 175  Q
    || || |||||  ||||  |||||||||  ||  |||| ||| |||||||||||||||||||    
T  14769824 catcgaattgatcatttctctgcaattcaaaaacgcgagctcgcattgaagcaagctcaagc 14769763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 4565566 - 4565517
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  || ||||||| ||||||||||||||||||||||||||||    
T  4565566 tttccaaagcatttctccattgaaggtttcaaccaaaaccttaggtaaaa 4565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 9481265 - 9481233
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  9481265 caagaacacaaaaccctaaccgttttccagaaa 9481233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 159 - 351
Target Start/End: Original strand, 36506940 - 36507127
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||| ||||||||||||||||||||||||||||||||| |    
T  36506940 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagatga---agatgaaccggtaaaccgatttattttcggtccaaaa-g 36507035  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaaact 351  Q
    |||||||||  ||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36507036 caagcaaaatcatcaaaa-tcatcaagcgcagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaaact 36507127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 16671153 - 16671344
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||     
T  16671153 cattgaagcaagctcaagcacataatcacagagaagtagagaaagaatcagagaagacgaagaagatgaaccggtaaaccgatttattttcggtccaaag 16671252  T
Q  257 agca-agcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    | || | |||||  ||| ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16671253 aacagatcaaaaccatc-aaattcatcaagaacagaatcaagttttccaaagatttcctccattaaaggtttcaaccaaaacctcaggtaaaa 16671344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 30728497 - 30728303
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    |||||||||||||||||  |||||||||||||||    || |||||||||||| |||||||||| ||||   ||||||||||||||||||||||||||||    
T  30728497 cattgaagcaagctcaattacgtaatcacagagagagaagtagagaaagaatcagagaagatgaagaagcaaaaccggtaaaccgatttattttcggtcc 30728398  T
Q  253 aaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||| | |||||| ||||||||||| ||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  30728397 aaagaacaagcagaagaatcaaaa-tcatcaagaacagaatcaaggtttccaaagattttctccattaaaggtttcaaccaaaacctcaggtaaaa 30728303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 10971738 - 10971923
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  10971738 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 10971833  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag--atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||   |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  10971834 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 10971923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 10937322 - 10937506
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| |||||||||||||||||||||||||||||  ||||    
T  10937322 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc--aaag 10937416  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag--atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||   |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  10937417 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 10937506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 10956513 - 10956697
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| |||||||||||||||||||||||||||||  ||||    
T  10956513 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc--aaag 10956607  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag--atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||   |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  10956608 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 10956697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 47200761 - 47200946
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| || ||    
T  47200761 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aagag 47200856  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag-atttccaaaga--tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||  ||||||||||  |||||||||||||| |||||||||||||| | ||||||||    
T  47200857 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttccaaagatttttcctccattaaaagtttcaaccaaaacttcaggtaaaa 47200946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 16671018 - 16671120
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  16671018 tttttacatcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattatcctacaattcaaagtgcgagctcacattgaagcaagctcaag 16671117  T
Q  175 cac 177  Q
    |||    
T  16671118 cac 16671120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 10971606 - 10971702
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  10971606 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagaattcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 10971702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 47200628 - 47200724
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  47200628 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagaattcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 47200724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 30728634 - 30728532
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||| | ||| |||| |||||| |||||||| ||||||||||||||||||||||    
T  30728634 ttttcgcatcaatcctcagagattcgtgtgaatcttcatcactggattgatgaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaag 30728535  T
Q  175 cac 177  Q
    |||    
T  30728534 cac 30728532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 14893585 - 14893697
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttcc-aaagatttcctccattaaaggtttcaacc 332  Q
    ||||||||||||||||||| | || |||||||| |||||||||| |||||||||||   ||||| ||||| |||||||||||||||||||||||||||||    
T  14893585 accgatttattttcggtcccagaa-caagcaaaggaatcaaaaaccagcaagaacat--tcaagttttcccaaagatttcctccattaaaggtttcaacc 14893681  T
Q  333 aaaaccttaggtaaaa 348  Q
    ||||||||||||||||    
T  14893682 aaaaccttaggtaaaa 14893697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 47766222 - 47766371
Alignment:
Q  26 caaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatcaccggattg 124  Q
    ||||||||||||||||| |||||||| | ||  |||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||  | ||||    
T  47766222 caaaaccctaaccgttt-ccagaaactcaaaaattcatcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatcattgaattg 47766319  T
Q  125 aagattttc-ctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |  |||||| ||||||||||||  |||| ||| ||| ||||||| |||||||    
T  47766320 atcattttctctgcaattccaaacgcgagctcgcatcgaagcaaactcaagc 47766371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 10933809 - 10933855
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaaga 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10933809 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaaga 10933855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 14893375 - 14893490
Alignment:
Q  59 ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcaca 158  Q
    |||||||||||||||| |||||| |||||| |||||||||||   ||||||||||||| || |||||  ||| | ||||||||||||  |||| ||| ||    
T  14893375 ttcatcagaatcaacagtttttggatcaattctcagagattctgttgaatcttcatcatcgaattgatcattct-ctgcaattccaaacgcgagctcgca 14893473  T
Q  159 ttgaagcaagctcaagc 175  Q
    || ||||||||||||||    
T  14893474 ttaaagcaagctcaagc 14893490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 47766454 - 47766567
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaacca 333  Q
    |||||||||||||||||||||| | |||||| || |||| ||||||| |||||||||||||||| | ||| ||||||| | | || ||| ||||||| ||    
T  47766454 accgatttattttcggtccaaagaacaagcagaaaaatc-aaaatcatcaagaacagaatcaagttctccgaagattttccctatcaaaagtttcaatca 47766552  T
Q  334 aaaccttaggtaaaa 348  Q
    |||| | ||||||||    
T  47766553 aaacttcaggtaaaa 47766567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 41784370 - 41784332
Alignment:
Q  310 ttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41784370 ttcctccattaaaggtttcaaccaaaaccttaggtaaaa 41784332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 41799638 - 41799600
Alignment:
Q  310 ttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41799638 ttcctccattaaaggtttcaaccaaaaccttaggtaaaa 41799600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 13768177 - 13768128
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  || ||||||| ||||||||||||||||||||||||||||    
T  13768177 tttccaaagcatttctccattgaaggtttcaaccaaaaccttaggtaaaa 13768128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 10937246 - 10937286
Alignment:
Q  137 caattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  10937246 caattcaaagtgcgagctcacattgaagcaagctcaagcac 10937286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 10956437 - 10956477
Alignment:
Q  137 caattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  10956437 caattcaaagtgcgagctcacattgaagcaagctcaagcac 10956477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 28578655 - 28578687
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  28578655 caagaacacaaaaccctaaccgttttccagaaa 28578687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 28594081 - 28594113
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  28594081 caagaacacaaaaccctaaccgttttccagaaa 28594113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 36506864 - 36506904
Alignment:
Q  137 caattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  36506864 caattcaaagtgcgagctcacattgaagcaagctcaagcac 36506904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 19199766 - 19199607
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttc-atcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19199766 caagaacaaaaaaccctaaccgttctccagaaaccctaattttccatcagaatcaacattttt-gcatcaatcctcagagattcgtgtgaatcttcatca 19199668  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19199667 ccggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 19199607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 19214821 - 19214662
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttc-atcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19214821 caagaacaaaaaaccctaaccgttctccagaaaccctaattttccatcagaatcaacattttt-gcatcaatcctcagagattcgtgtgaatcttcatca 19214723  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19214722 ccggattgaagattttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 19214662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 28353410 - 28353252
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||    
T  28353410 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaccattttttttatcaatcctcagagattcgtgtgaatcttcatcac 28353312  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28353311 cggattgaaggttttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 28353252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 28368595 - 28368437
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||    
T  28368595 caagaaca-aaaaccctaaccgttttccagaaaccctaattttcatcagaatcaccattttttttatcaatcctcagagattcgtgtgaatcttcatcac 28368497  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28368496 cggattgaaggttttcctgcaattccaagtgcgagctcacattgaagcaagctcaagcac 28368437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 31349755 - 31349940
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  31349755 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 31349850  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag--atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||   |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  31349851 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 31349940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 31363555 - 31363740
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  31363555 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 31363650  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag--atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||   |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  31363651 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 31363740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 40008997 - 40008896
Alignment:
Q  76 tttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  40008997 tttttgcatcaatcctcagagattcgtgtgaatcttcatcactggattgaaaattctcctgtaattccaagtgcgagctcacattgaagcaagctcaagc 40008898  T
Q  176 ac 177  Q
    ||    
T  40008897 ac 40008896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 31349622 - 31349718
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  31349622 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 31349718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 31363422 - 31363518
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  31363422 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 31363518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 19199482 - 19199408
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19199482 aaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 19199408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 19214537 - 19214463
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19214537 aaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 19214463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 28353127 - 28353053
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28353127 aaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 28353053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 28368312 - 28368238
Alignment:
Q  274 aaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28368312 aaaatcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 28368238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 19510319 - 19510226
Alignment:
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa-gatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19510319 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 19510226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 348
Target Start/End: Complemental strand, 40008865 - 40008684
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||       
T  40008865 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca--- 40008769  T
Q  257 agcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
           | ||||   |||||||| |||||||  | |||||||||||||||| |||||||||| ||| |||||||||||||| | ||||||||    
T  40008768 ------gagaagatcaaaaaatcatcaagaac--attcaagatttccaaagattttcctccatcaaaagtttcaaccaaaacttcaggtaaaa 40008684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 4818984 - 4818888
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  4818984 gaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca 4818888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 21339037 - 21338943
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| ||||||||||||| |||||||||||||| | ||||||||||| ||| |||||| |||||||| ||||||| |||||||||||||||||    
T  21339037 atcaattctcagagattcgtatgaatcttcatcactgaattgaagatttccctacaattctaagtgcgagctcacatcgaagcaagctcaagcac 21338943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 21378998 - 21378904
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| ||||||||||||| |||||||||||||| | ||||||||||| ||| |||||| |||||||| ||||||| |||||||||||||||||    
T  21378998 atcaattctcagagattcgtatgaatcttcatcactgaattgaagatttccctacaattctaagtgcgagctcacatcgaagcaagctcaagcac 21378904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 33240612 - 33240706
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| ||||||||||||| |||||||||||||| | ||||||||||| ||| |||||| |||||||| ||||||| |||||||||||||||||    
T  33240612 atcaattctcagagattcgtatgaatcttcatcactgaattgaagatttccctacaattctaagtgcgagctcacatcgaagcaagctcaagcac 33240706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 33251291 - 33251385
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| ||||||||||||| |||||||||||||| | ||||||||||| ||| |||||| |||||||| ||||||| |||||||||||||||||    
T  33251291 atcaattctcagagattcgtatgaatcttcatcactgaattgaagatttccctacaattctaagtgcgagctcacatcgaagcaagctcaagcac 33251385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 19199573 - 19199513
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  19199573 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagagtcagagaagatga 19199513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 19214628 - 19214568
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  19214628 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagagtcagagaagatga 19214568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 28353218 - 28353158
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  28353218 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagagtcagagaagatga 28353158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 28368403 - 28368343
Alignment:
Q  156 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  28368403 acattgaagcaagctcaagcacgtaatcacagagaagcagagaaagagtcagagaagatga 28368343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 3987774 - 3987875
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaacca 333  Q
    |||||||||||||||||||||| | |||||| ||||||| ||||||| |||||||||||||||| |||||| |||||| ||| || |||  |||||||||    
T  3987774 accgatttattttcggtccaaagaacaagcagaagaatc-aaaatcatcaagaacagaatcaagttttccagagattttctctatcaaa-atttcaacca 3987871  T
Q  334 aaac 337  Q
    ||||    
T  3987872 aaac 3987875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 3338671 - 3338578
Alignment:
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| || ||||||||||||  |||||||||| |||||||||| ||| |||||||||||||| | ||||||||    
T  3338671 aagcaagcagaagaatcaagaatcatcaggaacagaatcaaattttccaaagattttcctccataaaaagtttcaaccaaaacttcaggtaaaa 3338578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 44570128 - 44570196
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||| | | |||||| ||| |||||||||||||||||||||||||||| ||||    
T  44570128 accgatttattttcggtccagagaacaagcagaagcatcaaaaatcagcaagaacagaatcaagttttc 44570196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 6054167 - 6054098
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatc-aaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  6054167 accgatttattttcggtccaaagaacaagcagaagcatcaaaaaatcagcaagaacagaatcaagttttc 6054098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 31480832 - 31480783
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||| || ||||||||||||||||| ||||||||||||||||||    
T  31480832 tttccaaagaatttctccattaaaggtttcagccaaaaccttaggtaaaa 31480783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 31495978 - 31495929
Alignment:
Q  299 tttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||| || ||||||||||||||||| ||||||||||||||||||    
T  31495978 tttccaaagaatttctccattaaaggtttcagccaaaaccttaggtaaaa 31495929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 3336015 - 3335915
Alignment:
Q  75 ttttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    ||||| |||||||| ||||||||||||| |||||||||||||| | |||||    || |||||||||||||  |||| ||| |||  |||||||||||||    
T  3336015 tttttcgcatcaattctcagagattcgtatgaatcttcatcactgaattgattgattccctgcaattccaaacgcgagctcgcatcaaagcaagctcaag 3335916  T
Q  175 c 175  Q
    |    
T  3335915 c 3335915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 12083997 - 12083897
Alignment:
Q  75 ttttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    ||||| |||||||| ||||||||||||| |||||||||||||| | |||||    || |||||||||||||  |||| ||| |||  |||||||||||||    
T  12083997 tttttcgcatcaattctcagagattcgtatgaatcttcatcactgaattgattgattccctgcaattccaaacgcgagctcgcatcaaagcaagctcaag 12083898  T
Q  175 c 175  Q
    |    
T  12083897 c 12083897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 12099242 - 12099142
Alignment:
Q  75 ttttttgcatcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaag 174  Q
    ||||| |||||||| ||||||||||||| |||||||||||||| | |||||    || |||||||||||||  |||| ||| |||  |||||||||||||    
T  12099242 tttttcgcatcaattctcagagattcgtatgaatcttcatcactgaattgattgattccctgcaattccaaacgcgagctcgcatcaaagcaagctcaag 12099143  T
Q  175 c 175  Q
    |    
T  12099142 c 12099142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 3338879 - 3338734
Alignment:
Q  28 aaaccctaaccgttttccagaaaccctaattttcatcagaatcaaca-ttttttgcatcaatcctcagagattc-gtgtgaatcttcatcaccggattga 125  Q
    ||||||||||||||||||||||| |  ||  |||||||||||||||| ||||||| |||||| |||| |||||| ||| ||||||||||||  | |||||    
T  3338879 aaaccctaaccgttttccagaaatc--aaaattcatcagaatcaacagttttttggatcaattctcaaagattctgtg-gaatcttcatcattgaattga 3338783  T
Q  126 agattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
       || | ||||||||||||  || | ||| |||||||||||||||||||    
T  3338782 ccgttct-ctgcaattccaaacgcaagctcgcattgaagcaagctcaagc 3338734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 6054417 - 6054385
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  6054417 caagaacacaaaaccctaaccgttttccagaaa 6054385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 44569880 - 44569912
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  44569880 caagaacacaaaaccctaaccgttttccagaaa 44569912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 3335857 - 3335800
Alignment:
Q  193 cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggt 250  Q
    |||||||||||||||||||||||| |||    | || |||||||||||||||||||||    
T  3335857 cagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggt 3335800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 4819056 - 4819023
Alignment:
Q  144 aagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||| |||||||||||||||||||||||||    
T  4819056 aagtgcgagctcacattgaagcaagctcaagcac 4819023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 15160 - 15353
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagagaa----gcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    ||||||||||||||||| |||| ||||||||||||    | |||||||||||| |||||||||| ||||  |||||||||||||||||||||||||||||    
T  15160 cattgaagcaagctcaaacacgaaatcacagagaaagaagtagagaaagaatcagagaagatgaagaagcagaaccggtaaaccgatttattttcggtcc 15259  T
Q  253 aaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||| ||||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15260 aaaa-gcaagcaaaatcatcaaaa-tcatcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 15353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 14966 - 15125
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    |||||||| ||||||||||||||||||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  14966 caagaaca-aaaaccctaaccgttttccagaaactcaaaaattcatcagaatcaacaattttcgcatcaatcctcagagattcgtgtgaatcttcatcac 15064  T
Q  118 cggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||| ||| |||| |||||| | |||||| |||||||||||||||||||||||||    
T  15065 cggattgaagaattctcctacaattcaaggtgcgagctcacattgaagcaagctcaagcac 15125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1629 (Bit Score: 99; Significance: 8e-49; HSPs: 2)
Name: scaffold1629
Description:

Target: scaffold1629; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 1202 - 1088
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaagatttcctccattaaaggtttcaacca 333  Q
    |||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1202 accgatttattttcggtccaaagaacaagcaaaagaatcaaaaaccagcaagaacagaatcaagatttccaaatatttcctccattaaaggtttcaacca 1103  T
Q  334 aaaccttaggtaaaa 348  Q
    |||||||||||||||    
T  1102 aaaccttaggtaaaa 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1629; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 1426 - 1281
Alignment:
Q  28 aaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtg-aatcttcatcaccggattgaa 126  Q
    ||||||||||||||||||||||| |  ||||  | |||||| ||||| |||||| |||||| ||||||||||| |||| |||||||||||  | |||||     
T  1426 aaaccctaaccgttttccagaaatcaaaatt--cgtcagaagcaacaatttttggatcaattctcagagattc-tgtggaatcttcatcattgaattgat 1330  T
Q  127 gattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
      |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  1329 cgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 1281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 93; Significance: 3e-45; HSPs: 4)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 130769 - 130584
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  130769 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 130674  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaagattt--ccaaa-gatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | ||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  130673 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttcccaaaggttttcctccattaaaggtttcaaccaaaaccttaggtaaaa 130584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 130902 - 130806
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  130902 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 130806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 114501 - 114401
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagagaag----cagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaa 256  Q
    |||||||||||||||||||||||||||||||     |||||||||||||||||||||||| |||    | || |||||||||||||||||||||||||||    
T  114501 gaagcaagctcaagcacgtaatcacagagaaagaaacagagaaagaatcggagaagatgaagaaaccaagccagtaaaccgatttattttcggtccaaaa 114402  T
Q  257 a 257  Q
    |    
T  114401 a 114401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 114634 - 114540
Alignment:
Q  83 atcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||| ||||||||||||| |||||||||| ||| | |||| |||||| ||| |||||| |||||||| ||||||| |||||||||||||||||    
T  114634 atcaattctcagagattcgtatgaatcttcaccactgaattggagatttccctacaattctaagtgcgagctcacatcgaagcaagctcaagcac 114540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 25698 - 25539
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| ||||||| |  ||  |||||||||| |||||   |||  |||||||||||||||||||||||||||||||||||    
T  25698 caagaacacaaaaccctaaccgttt-ccagaaatcaaaaagttcatcagaaatcaactaatttcacatcaatcctcagagattcgtgtgaatcttcatca 25600  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||    
T  25599 ctggattgaagattctcctgcaattctaagtgcgagctcacgttgaagcaagctcaagcac 25539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 25507 - 25411
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||||||||||    || || |||||||||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  25507 gaagcaagctcaagcacgtaatcacagagagaaaagtagggaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca 25411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 47146 - 47305
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| ||||||| |  ||  |||||||||| |||||   |||  |||||||||||||||||||||||||||||||||||    
T  47146 caagaacacaaaaccctaaccgttt-ccagaaatcaaaaagttcatcagaaatcaactaatttcacatcaatcctcagagattcgtgtgaatcttcatca 47244  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||    
T  47245 ctggattgaagattctcctgcaattctaagtgcgagctcacgttgaagcaagctcaagcac 47305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 47337 - 47433
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||||||||||    || || |||||||||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  47337 gaagcaagctcaagcacgtaatcacagagagaaaagtagggaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcca 47433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 84; Significance: 8e-40; HSPs: 3)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 23234 - 23392
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatcac 117  Q
    ||||||||||||||||||||||||| ||| |||    ||  ||||||||||||||||  |||  | ||||||||||||||||||||||||||||||||||    
T  23234 caagaacacaaaaccctaaccgttt-ccaaaaatttcaaaattcatcagaatcaacaaatttcacgtcaatcctcagagattcgtgtgaatcttcatcac 23332  T
Q  118 cggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
     |||||||||||| ||||||||||| |||| ||| |||||||||||||||||||||||||    
T  23333 tggattgaagattctcctgcaattcaaagtacgagctcacattgaagcaagctcaagcac 23392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 23548 - 23622
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||| ||||| ||||    
T  23548 accgatttattttcggtccaaagaacaagcagaagaatcaaaaatcatcaagaacagaatcaagttttccgaaga 23622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 23404 - 23458
Alignment:
Q  123 tgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||| ||| ||||||||||| |||||||| ||||| |||||||||||||||||||    
T  23404 tgaaaattctcctgcaattctaagtgcgagctcacgttgaagcaagctcaagcac 23458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1803 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold1803
Description:

Target: scaffold1803; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 634 - 820
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  634 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 729  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag---atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||    |||||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  730 caagcaaaatcatc-aaaaccgtcaagaac--attcaagtttttttccaaagattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1803; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 501 - 597
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||| |||||||||||||||||||||||||    
T  501 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagaattcccctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1760 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold1760
Description:

Target: scaffold1760; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 723 - 908
Alignment:
Q  159 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtccaaaaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  723 ttgaagcaagctcaagcacgtaatcacagagaagcagagaaagaatcagagaagat---gaagatgaaccggtaaaccgatttattttcggtcc-aaaag 818  T
Q  259 caagcaaaagaatcaaaaatcagcaagaacagaatcaag--atttccaaaga-tttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||  ||| |||| |  |||||||  | |||||   |||||||| | |||||||||||||| |||||||||||||| | ||||||||    
T  819 caagcaaaatcatc-aaaaccgtcaagaac--attcaagttttttccaaatattttcctccattaaaagtttcaaccaaaacttcaggtaaaa 908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1760; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 590 - 686
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagattt-tcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||| ||||||| |||||||||||||||||    
T  590 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaagatttcccctacaattcaaagtgcgagctcacatcgaagcaagctcaagcac 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 56624 - 56461
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaa-tcaacattttttgcatcaatcctcagagattcgtgtgaatcttcatca 116  Q
    ||||||||||||||||||||||||| ||||||| |  ||  |||||||||| |||||   |||  |||||||||||||||||||||||||||||||||||    
T  56624 caagaacacaaaaccctaaccgttt-ccagaaatcaaaaagttcatcagaaatcaactaatttctcatcaatcctcagagattcgtgtgaatcttcatca 56526  T
Q  117 ccggattgaagattttcctgcaattcc----aagtgcgaactcacattgaagcaagctcaagcac 177  Q
    | |||||||||||| ||||||||||||    |||||||| |||||||||||||||||||||||||    
T  56525 ctggattgaagattctcctgcaattccaattaagtgcgagctcacattgaagcaagctcaagcac 56461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 56429 - 56333
Alignment:
Q  161 gaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcca 253  Q
    ||||||||||||||||||||||||||||||    || || ||||||||||||||||||||  ||   ||||||||||||||||||||||||||||||    
T  56429 gaagcaagctcaagcacgtaatcacagagagagaagtagggaaagaatcggagaagatgaataaacagaaccggtaaaccgatttattttcggtcca 56333  T

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Target: scaffold0166 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 28860 - 28767
Alignment:
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa-gatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28860 aagcaagcagaagaatcaagaatcatcaagaacagaatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 28767  T

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Target: scaffold0252 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 2079 - 1983
Alignment:
Q  82 catcaatcctcagagattcgtgtgaatcttcatcaccggattgaag-attttcctgcaattccaagtgcgaactcacattgaagcaagctcaagcac 177  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||| |||||||||||||||||||||||||    
T  2079 catcaatcctcagagattcgtgtgaatcttcatcactggattgaagaattctcctacaattcaaagtgcgagctcacattgaagcaagctcaagcac 1983  T

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Target: scaffold0252; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 1947 - 1846
Alignment:
Q  157 cattgaagcaagctcaagcacgtaatcacagaga----agcagagaaagaatcggagaagatgaggaagaggaaccggtaaaccgatttattttcggtcc 252  Q
    ||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||    
T  1947 cattgaagcaagctcaagcacgtaatcacagagagagaagtagagaaagaatcggagaagatgaagaaacagaaccggtaaaccgatttattttcggtcc 1848  T
Q  253 aa 254  Q
    ||    
T  1847 aa 1846  T

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Target: scaffold1179 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold1179
Description:

Target: scaffold1179; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 1708 - 1615
Alignment:
Q  256 aagcaagcaaaagaatcaaaaatcagcaagaacagaatcaa-gatttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    ||||||||| ||||||||| ||||| |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1708 aagcaagcagaagaatcaagaatcatcaagaacataatcaaagttttccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 1615  T

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Target: scaffold0250 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 572 - 498
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttccaaaga 308  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  572 accgatttattttcggtccaaagaacaagcaaaagaatcaaaaaccagcaagaacagaatcaagttttccgaaga 498  T

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Target: scaffold0250; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 809 - 655
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaattttcatcagaatcaacattttttgcatcaatcctcagagattc-gtgtgaatcttcatca 116  Q
    |||||||| |||||||||||||||||||||||| |  ||||  |||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  809 caagaaca-aaaaccctaaccgttttccagaaatcaaaatt--catcagaatcaacaatttttggatcaattctcagagattctgtg-gaatcttcatca 714  T
Q  117 ccggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
      | |||||   |||  ||||||||||||  |||| ||| |||||||||||||||||||    
T  713 ttgaattgatcgtttctctgcaattccaaacgcgagctcgcattgaagcaagctcaagc 655  T

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Target: scaffold0182 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 2777 - 2934
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaaccctaatt-ttcatcagaatcaacattttttgcatcaatcctcagagattcgtgtg-aatcttcatc 115  Q
    |||||||| ||||||||||||||||||||||||| | ||   |||||||||||||| | |||||| |||||| ||||||||||| |||| ||||||||||    
T  2777 caagaaca-aaaaccctaaccgttttccagaaactcaaaaagttcatcagaatcaataatttttggatcaattctcagagattc-tgtggaatcttcatc 2874  T
Q  116 accggattgaagattttcctgcaattccaagtgcgaactcacattgaagcaagctcaagc 175  Q
    | || |||||  ||||  ||||||||| ||  |||| ||| |||||||||||||||||||    
T  2875 atcgaattgatcatttctctgcaattcaaaacgcgagctcgcattgaagcaagctcaagc 2934  T

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Target: scaffold0159 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 16927 - 16881
Alignment:
Q  302 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16927 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 16881  T

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Target: scaffold0603 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 617 - 549
Alignment:
Q  234 accgatttattttcggtccaaaaagcaagcaaaagaatcaaaaatcagcaagaacagaatcaagatttc 302  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||| ||||| ||||    
T  617 accgatttattttcggtccaaagaacaagcagaagcatcaaaaatcagcaagaacagagtcaagttttc 549  T

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Target: scaffold0603; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 867 - 835
Alignment:
Q  18 caagaacacaaaaccctaaccgttttccagaaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  867 caagaacacaaaaccctaaccgttttccagaaa 835  T

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Target: scaffold0350 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 13512 - 13467
Alignment:
Q  302 ccaaagatttcctccattaaaggtttcaaccaaaaccttaggtaaaa 348  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||    
T  13512 ccaaagttttcctccattaaaggtttcaaccaaaa-cttaggtaaaa 13467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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