View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19884_low_1 (Length: 654)

Name: NF19884_low_1
Description: NF19884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19884_low_1
NF19884_low_1
[»] chr3 (58 HSPs)
chr3 (16-399)||(53836160-53836543)
chr3 (16-399)||(49296317-49296699)
chr3 (446-630)||(49296077-49296270)
chr3 (449-630)||(8598620-8598811)
chr3 (447-630)||(53835923-53836115)
chr3 (449-630)||(22489434-22489615)
chr3 (273-399)||(22489271-22489396)
chr3 (505-630)||(25049841-25049967)
chr3 (488-600)||(20833344-20833456)
chr3 (488-600)||(26107776-26107888)
chr3 (488-600)||(48379597-48379709)
chr3 (488-578)||(33693278-33693368)
chr3 (503-600)||(9818568-9818665)
chr3 (488-600)||(49458358-49458470)
chr3 (488-600)||(50902950-50903062)
chr3 (488-594)||(16155170-16155276)
chr3 (16-113)||(22488583-22488685)
chr3 (488-594)||(37455300-37455406)
chr3 (488-600)||(52810805-52810917)
chr3 (488-600)||(54629298-54629410)
chr3 (491-578)||(21386476-21386563)
chr3 (491-594)||(39038543-39038646)
chr3 (493-588)||(51737333-51737428)
chr3 (488-594)||(31645902-31646008)
chr3 (471-600)||(4962703-4962832)
chr3 (501-594)||(52617626-52617719)
chr3 (491-599)||(18750091-18750199)
chr3 (488-588)||(40897590-40897690)
chr3 (488-600)||(50761741-50761853)
chr3 (470-578)||(7665613-7665720)
chr3 (488-578)||(36673793-36673883)
chr3 (488-588)||(23753030-23753130)
chr3 (488-572)||(34483739-34483823)
chr3 (488-599)||(7437560-7437671)
chr3 (491-600)||(17946675-17946780)
chr3 (19-225)||(21385965-21386183)
chr3 (517-600)||(43172927-43173010)
chr3 (490-600)||(44905498-44905608)
chr3 (66-131)||(1666392-1666457)
chr3 (503-558)||(27261435-27261490)
chr3 (40-223)||(4962208-4962403)
chr3 (503-600)||(37832572-37832669)
chr3 (503-572)||(47467415-47467484)
chr3 (505-572)||(45602422-45602490)
chr3 (139-226)||(43173307-43173394)
chr3 (503-557)||(49293846-49293900)
chr3 (66-226)||(49458770-49458942)
chr3 (139-226)||(33693670-33693757)
chr3 (518-593)||(53645332-53645407)
chr3 (546-588)||(2118484-2118526)
chr3 (35-113)||(7437051-7437129)
chr3 (81-131)||(33693777-33693827)
chr3 (503-600)||(19386895-19386991)
chr3 (503-600)||(40064278-40064375)
chr3 (491-548)||(42736359-42736416)
chr3 (20-95)||(27162864-27162938)
chr3 (153-251)||(30238192-30238290)
chr3 (503-600)||(30238499-30238597)
[»] chr1 (73 HSPs)
chr1 (16-399)||(11578616-11578999)
chr1 (16-399)||(41353643-41354026)
chr1 (16-399)||(26757838-26758221)
chr1 (16-370)||(8147593-8147948)
chr1 (16-370)||(1242797-1243150)
chr1 (446-630)||(11579046-11579230)
chr1 (446-630)||(41353403-41353596)
chr1 (446-630)||(1243252-1243445)
chr1 (446-630)||(26757597-26757790)
chr1 (446-630)||(4005049-4005243)
chr1 (446-630)||(8147299-8147492)
chr1 (16-270)||(5208789-5209024)
chr1 (446-630)||(9192006-9192200)
chr1 (449-630)||(51106874-51107065)
chr1 (470-594)||(5209338-5209462)
chr1 (488-600)||(45273015-45273127)
chr1 (488-600)||(47371563-47371675)
chr1 (505-599)||(1108374-1108468)
chr1 (488-600)||(5494736-5494848)
chr1 (488-600)||(46328434-46328546)
chr1 (503-600)||(7798521-7798618)
chr1 (470-631)||(32760069-32760230)
chr1 (488-588)||(6313036-6313136)
chr1 (488-588)||(15834672-15834772)
chr1 (488-588)||(25612552-25612652)
chr1 (488-588)||(29396072-29396172)
chr1 (488-599)||(48966479-48966590)
chr1 (503-593)||(33886863-33886953)
chr1 (503-593)||(33957297-33957387)
chr1 (488-600)||(8140871-8140983)
chr1 (488-588)||(18798912-18799012)
chr1 (470-586)||(42304470-42304586)
chr1 (488-599)||(48177080-48177192)
chr1 (488-591)||(49453048-49453152)
chr1 (503-600)||(34019140-34019237)
chr1 (491-588)||(35177201-35177298)
chr1 (504-572)||(15927348-15927416)
chr1 (488-600)||(25830887-25830999)
chr1 (488-572)||(38535784-38535868)
chr1 (488-572)||(38558002-38558086)
chr1 (488-588)||(49231467-49231567)
chr1 (493-600)||(3583549-3583656)
chr1 (503-578)||(34751575-34751650)
chr1 (468-588)||(25253526-25253646)
chr1 (19-127)||(32759557-32759665)
chr1 (488-572)||(51702071-51702155)
chr1 (523-600)||(18954486-18954563)
chr1 (505-600)||(49971599-49971696)
chr1 (508-600)||(49236974-49237066)
chr1 (505-600)||(52182347-52182443)
chr1 (345-399)||(8147539-8147592)
chr1 (470-588)||(28403916-28404034)
chr1 (488-558)||(29219611-29219681)
chr1 (49-270)||(226270-226490)
chr1 (517-630)||(3593237-3593350)
chr1 (513-594)||(27257871-27257952)
chr1 (139-226)||(47371178-47371265)
chr1 (20-213)||(46042306-46042492)
chr1 (66-131)||(28403502-28403567)
chr1 (66-131)||(49452584-49452649)
chr1 (139-226)||(49236606-49236693)
chr1 (345-399)||(1243151-1243204)
chr1 (19-131)||(8122463-8122572)
chr1 (523-588)||(9322181-9322246)
chr1 (66-131)||(25254042-25254107)
chr1 (34-127)||(47371061-47371154)
chr1 (488-540)||(28387093-28387145)
chr1 (146-226)||(35176884-35176964)
chr1 (146-226)||(42303997-42304077)
chr1 (153-226)||(28403603-28403676)
chr1 (139-223)||(3593644-3593728)
chr1 (144-216)||(49452673-49452745)
chr1 (501-549)||(51902024-51902072)
[»] chr5 (35 HSPs)
chr5 (16-399)||(37797634-37798018)
chr5 (16-399)||(28622683-28623066)
chr5 (16-270)||(5650292-5650543)
chr5 (449-630)||(7125114-7125305)
chr5 (446-630)||(28623114-28623307)
chr5 (446-600)||(37798067-37798221)
chr5 (470-594)||(5651158-5651282)
chr5 (503-600)||(2675078-2675175)
chr5 (488-600)||(4240107-4240219)
chr5 (503-578)||(21238763-21238838)
chr5 (503-594)||(33892846-33892937)
chr5 (491-600)||(1460790-1460899)
chr5 (488-600)||(4549899-4550011)
chr5 (488-594)||(5949566-5949672)
chr5 (488-600)||(13926380-13926492)
chr5 (488-588)||(39852831-39852931)
chr5 (488-588)||(13999735-13999835)
chr5 (488-588)||(37014315-37014415)
chr5 (488-578)||(40013346-40013436)
chr5 (19-131)||(29716380-29716490)
chr5 (505-600)||(16548850-16548946)
chr5 (509-600)||(34909592-34909683)
chr5 (488-561)||(1151932-1152005)
chr5 (523-588)||(25868811-25868876)
chr5 (488-599)||(29716780-29716891)
chr5 (505-600)||(29758706-29758801)
chr5 (504-599)||(16497741-16497836)
chr5 (19-213)||(31913805-31913992)
chr5 (503-599)||(15286536-15286634)
chr5 (504-578)||(31913520-31913594)
chr5 (523-588)||(15672705-15672770)
chr5 (503-556)||(19223054-19223107)
chr5 (550-594)||(24258534-24258578)
chr5 (146-226)||(29716517-29716597)
chr5 (179-270)||(36196027-36196119)
[»] chr8 (58 HSPs)
chr8 (16-399)||(19484415-19484798)
chr8 (446-630)||(19484176-19484369)
chr8 (470-600)||(8029811-8029941)
chr8 (491-600)||(10294982-10295091)
chr8 (488-572)||(31625785-31625869)
chr8 (505-632)||(37131291-37131419)
chr8 (488-578)||(14781772-14781862)
chr8 (488-578)||(26856576-26856666)
chr8 (492-600)||(9288138-9288246)
chr8 (488-588)||(44725431-44725531)
chr8 (488-594)||(18305616-18305722)
chr8 (488-600)||(43166316-43166428)
chr8 (488-631)||(27878623-27878766)
chr8 (488-631)||(28018804-28018947)
chr8 (488-588)||(19717514-19717614)
chr8 (488-600)||(32497990-32498102)
chr8 (505-567)||(17234747-17234810)
chr8 (505-631)||(24067075-24067202)
chr8 (503-594)||(28317075-28317166)
chr8 (488-594)||(16364161-16364267)
chr8 (488-594)||(39467158-39467264)
chr8 (488-578)||(42305244-42305334)
chr8 (503-588)||(41252176-41252261)
chr8 (488-588)||(18958367-18958467)
chr8 (488-588)||(43308148-43308248)
chr8 (503-578)||(1527908-1527983)
chr8 (505-588)||(6388131-6388214)
chr8 (146-256)||(33177485-33177596)
chr8 (488-594)||(27915567-27915673)
chr8 (488-594)||(27961986-27962092)
chr8 (520-588)||(12522528-12522596)
chr8 (139-226)||(27878220-27878307)
chr8 (139-226)||(28018401-28018488)
chr8 (488-578)||(7466792-7466882)
chr8 (503-588)||(33177851-33177936)
chr8 (488-555)||(12522422-12522489)
chr8 (139-226)||(27915164-27915251)
chr8 (139-226)||(27961583-27961670)
chr8 (34-132)||(41394374-41394472)
chr8 (66-131)||(8029377-8029442)
chr8 (66-131)||(12737607-12737672)
chr8 (492-573)||(26620338-26620419)
chr8 (40-127)||(12521903-12521990)
chr8 (40-131)||(44977242-44977333)
chr8 (504-585)||(4871114-4871195)
chr8 (66-131)||(6387425-6387490)
chr8 (505-557)||(35879722-35879775)
chr8 (146-223)||(44977138-44977215)
chr8 (35-127)||(3007313-3007405)
chr8 (488-524)||(37857409-37857445)
chr8 (146-226)||(42423609-42423689)
chr8 (144-215)||(8029466-8029537)
chr8 (139-226)||(12737692-12737779)
chr8 (491-578)||(41393978-41394065)
chr8 (40-131)||(42423717-42423808)
chr8 (144-226)||(3007423-3007505)
chr8 (139-188)||(6387510-6387559)
chr8 (146-226)||(12522021-12522101)
[»] chr4 (72 HSPs)
chr4 (16-399)||(29469366-29469748)
chr4 (16-399)||(8084394-8084776)
chr4 (16-216)||(42937097-42937297)
chr4 (446-600)||(29469163-29469317)
chr4 (446-630)||(42937360-42937544)
chr4 (470-630)||(8084170-8084339)
chr4 (488-630)||(50517163-50517305)
chr4 (16-113)||(23671080-23671178)
chr4 (470-594)||(23671347-23671471)
chr4 (491-594)||(41725568-41725671)
chr4 (488-600)||(29855965-29856077)
chr4 (488-600)||(49501173-49501285)
chr4 (488-600)||(49507238-49507350)
chr4 (523-629)||(33138771-33138877)
chr4 (503-600)||(6487324-6487421)
chr4 (488-600)||(49834474-49834586)
chr4 (492-631)||(46286678-46286817)
chr4 (468-629)||(24966490-24966651)
chr4 (503-600)||(51967277-51967374)
chr4 (488-588)||(5441863-5441963)
chr4 (492-600)||(29510061-29510169)
chr4 (488-588)||(48261539-48261639)
chr4 (488-578)||(37828070-37828160)
chr4 (503-588)||(9972785-9972870)
chr4 (488-633)||(26491114-26491259)
chr4 (488-573)||(28484372-28484457)
chr4 (488-600)||(32322515-32322628)
chr4 (488-588)||(27768525-27768625)
chr4 (488-555)||(37916283-37916350)
chr4 (505-573)||(871836-871905)
chr4 (503-600)||(8563364-8563461)
chr4 (488-588)||(5800425-5800525)
chr4 (488-600)||(23987646-23987757)
chr4 (488-600)||(30966983-30967095)
chr4 (488-588)||(51321317-51321417)
chr4 (504-600)||(56423982-56424078)
chr4 (503-588)||(26448643-26448728)
chr4 (503-600)||(40162789-40162886)
chr4 (503-588)||(54561231-54561316)
chr4 (504-624)||(23170738-23170859)
chr4 (35-226)||(24965984-24966188)
chr4 (488-588)||(50018653-50018753)
chr4 (496-588)||(54341603-54341695)
chr4 (517-600)||(32889896-32889979)
chr4 (523-594)||(41470352-41470423)
chr4 (488-594)||(32683668-32683774)
chr4 (490-572)||(54853118-54853200)
chr4 (179-270)||(25842632-25842724)
chr4 (35-131)||(32890388-32890484)
chr4 (19-131)||(46862422-46862534)
chr4 (505-599)||(55165526-55165621)
chr4 (514-600)||(21486515-21486601)
chr4 (45-131)||(33139307-33139393)
chr4 (523-600)||(46862941-46863018)
chr4 (73-132)||(35518049-35518108)
chr4 (139-257)||(40317281-40317400)
chr4 (139-257)||(40327355-40327474)
chr4 (19-129)||(14334826-14334936)
chr4 (488-542)||(29649645-29649699)
chr4 (541-599)||(40487703-40487761)
chr4 (34-127)||(12754822-12754915)
chr4 (503-600)||(14334394-14334491)
chr4 (505-557)||(24453923-24453976)
chr4 (524-600)||(25013446-25013522)
chr4 (140-216)||(46862555-46862631)
chr4 (550-600)||(3860237-3860287)
chr4 (550-600)||(3868994-3869044)
chr4 (504-558)||(29966401-29966455)
chr4 (66-226)||(50517519-50517670)
chr4 (503-544)||(26955392-26955433)
chr4 (118-197)||(871954-872034)
chr4 (139-226)||(33139199-33139287)
[»] chr7 (61 HSPs)
chr7 (24-399)||(4639398-4639773)
chr7 (16-370)||(14741681-14742036)
chr7 (16-212)||(37915573-37915770)
chr7 (450-630)||(14741387-14741576)
chr7 (446-631)||(4639820-4640014)
chr7 (446-630)||(37915851-37916026)
chr7 (488-600)||(37328354-37328466)
chr7 (493-600)||(44256406-44256513)
chr7 (488-588)||(510105-510205)
chr7 (505-628)||(11735194-11735318)
chr7 (488-588)||(28342770-28342870)
chr7 (488-600)||(29585961-29586073)
chr7 (488-588)||(40460360-40460460)
chr7 (488-578)||(7993626-7993716)
chr7 (488-558)||(21067869-21067939)
chr7 (503-588)||(21024078-21024163)
chr7 (488-600)||(12740817-12740929)
chr7 (488-588)||(29614441-29614541)
chr7 (488-588)||(39784566-39784666)
chr7 (488-600)||(48136874-48136986)
chr7 (503-594)||(14732298-14732389)
chr7 (488-599)||(41827776-41827887)
chr7 (488-593)||(8675785-8675891)
chr7 (488-578)||(29893441-29893531)
chr7 (488-594)||(33891880-33891986)
chr7 (488-594)||(42610623-42610729)
chr7 (488-594)||(44121579-44121685)
chr7 (491-572)||(23017020-23017101)
chr7 (488-573)||(30823112-30823197)
chr7 (488-588)||(18838869-18838969)
chr7 (488-588)||(23101750-23101850)
chr7 (488-600)||(37972523-37972635)
chr7 (488-600)||(39028534-39028646)
chr7 (488-572)||(47067185-47067269)
chr7 (19-226)||(23017388-23017607)
chr7 (503-600)||(34656605-34656702)
chr7 (503-600)||(35313557-35313654)
chr7 (488-588)||(3023393-3023493)
chr7 (492-600)||(28034498-28034606)
chr7 (503-577)||(19594233-19594307)
chr7 (505-578)||(33497097-33497171)
chr7 (40-131)||(21486648-21486739)
chr7 (158-267)||(1254147-1254257)
chr7 (488-578)||(21486164-21486254)
chr7 (503-588)||(6268513-6268598)
chr7 (505-588)||(26201794-26201878)
chr7 (503-575)||(38910506-38910578)
chr7 (139-226)||(43172470-43172557)
chr7 (345-399)||(14741627-14741680)
chr7 (499-600)||(16709435-16709534)
chr7 (499-600)||(17683671-17683770)
chr7 (523-600)||(32884218-32884295)
chr7 (534-571)||(43172183-43172220)
chr7 (505-600)||(27148845-27148941)
chr7 (153-251)||(6268825-6268924)
chr7 (503-569)||(1254471-1254537)
chr7 (139-226)||(16709942-16710029)
chr7 (139-226)||(17684178-17684265)
chr7 (503-588)||(31174721-31174806)
chr7 (523-588)||(36415080-36415145)
chr7 (488-520)||(32884289-32884321)
[»] chr2 (61 HSPs)
chr2 (16-370)||(18899419-18899774)
chr2 (450-634)||(18899879-18900072)
chr2 (16-113)||(15224524-15224621)
chr2 (503-627)||(3991745-3991870)
chr2 (497-594)||(15224236-15224333)
chr2 (503-599)||(13898477-13898573)
chr2 (503-599)||(14039094-14039190)
chr2 (505-629)||(15926349-15926474)
chr2 (503-600)||(33262853-33262950)
chr2 (503-600)||(38413458-38413555)
chr2 (488-588)||(18177732-18177832)
chr2 (488-588)||(28739935-28740035)
chr2 (491-630)||(35404311-35404450)
chr2 (470-600)||(40829636-40829766)
chr2 (503-588)||(19948550-19948635)
chr2 (491-599)||(3575291-3575399)
chr2 (488-588)||(7027364-7027464)
chr2 (488-600)||(10657879-10657991)
chr2 (488-600)||(13833060-13833172)
chr2 (488-588)||(28845046-28845146)
chr2 (488-588)||(33136077-33136177)
chr2 (488-572)||(43825317-43825401)
chr2 (503-594)||(11153354-11153445)
chr2 (488-578)||(18727636-18727726)
chr2 (104-251)||(32294233-32294382)
chr2 (179-270)||(2308395-2308487)
chr2 (492-600)||(6224222-6224330)
chr2 (488-588)||(25288624-25288724)
chr2 (488-588)||(26789246-26789346)
chr2 (503-594)||(41978843-41978934)
chr2 (492-594)||(379385-379487)
chr2 (488-594)||(31847207-31847313)
chr2 (505-630)||(32293883-32294008)
chr2 (35-216)||(38295228-38295409)
chr2 (488-572)||(38295707-38295791)
chr2 (488-572)||(43078967-43079051)
chr2 (485-588)||(24025860-24025963)
chr2 (488-578)||(2308703-2308793)
chr2 (523-600)||(12877686-12877763)
chr2 (503-572)||(45161137-45161206)
chr2 (19-130)||(31846644-31846755)
chr2 (513-631)||(1833720-1833838)
chr2 (491-560)||(34342278-34342347)
chr2 (503-572)||(43304976-43305044)
chr2 (40-131)||(2308052-2308143)
chr2 (92-230)||(37810459-37810591)
chr2 (504-555)||(43318766-43318817)
chr2 (345-399)||(18899775-18899828)
chr2 (505-578)||(32242211-32242285)
chr2 (73-131)||(34342755-34342813)
chr2 (66-131)||(30850868-30850933)
chr2 (488-540)||(3464111-3464163)
chr2 (505-560)||(3858427-3858483)
chr2 (179-270)||(24026154-24026246)
chr2 (514-594)||(37810898-37810978)
chr2 (19-131)||(42242310-42242422)
chr2 (19-94)||(37654874-37654949)
chr2 (503-594)||(30850274-30850364)
chr2 (139-224)||(18727251-18727336)
chr2 (153-226)||(34342648-34342721)
chr2 (146-226)||(31846783-31846863)
[»] chr6 (35 HSPs)
chr6 (446-630)||(1463616-1463810)
chr6 (446-630)||(6788061-6788255)
chr6 (446-631)||(10113726-10113920)
chr6 (470-594)||(3000246-3000370)
chr6 (503-600)||(31996251-31996348)
chr6 (491-591)||(31975643-31975743)
chr6 (471-600)||(16438706-16438835)
chr6 (488-588)||(31896097-31896197)
chr6 (492-599)||(2606896-2607003)
chr6 (505-600)||(8779586-8779681)
chr6 (197-270)||(10110786-10110859)
chr6 (491-588)||(31067892-31067989)
chr6 (491-631)||(13461342-13461481)
chr6 (501-588)||(14262090-14262177)
chr6 (504-594)||(21199560-21199650)
chr6 (501-594)||(7497552-7497645)
chr6 (491-571)||(4200095-4200175)
chr6 (525-619)||(28900863-28900957)
chr6 (488-588)||(30384705-30384805)
chr6 (494-594)||(34758726-34758826)
chr6 (488-560)||(34773873-34773945)
chr6 (523-600)||(7835387-7835464)
chr6 (508-572)||(31535068-31535132)
chr6 (19-131)||(31975231-31975343)
chr6 (139-226)||(16439105-16439192)
chr6 (66-131)||(2607419-2607484)
chr6 (470-578)||(12028997-12029105)
chr6 (468-544)||(24194469-24194546)
chr6 (139-222)||(28900440-28900523)
chr6 (596-630)||(1452084-1452118)
chr6 (139-225)||(24194877-24194963)
chr6 (144-271)||(21010528-21010656)
chr6 (146-226)||(33640889-33640969)
chr6 (506-588)||(21010883-21010965)
chr6 (66-131)||(15381130-15381195)
[»] scaffold1128 (1 HSPs)
scaffold1128 (488-600)||(893-1005)
[»] scaffold0543 (1 HSPs)
scaffold0543 (488-588)||(10985-11085)
[»] scaffold0421 (1 HSPs)
scaffold0421 (503-572)||(1727-1796)
[»] scaffold0042 (1 HSPs)
scaffold0042 (488-600)||(57705-57817)
[»] scaffold0263 (2 HSPs)
scaffold0263 (446-520)||(414-489)
scaffold0263 (596-631)||(505-540)
[»] scaffold0383 (1 HSPs)
scaffold0383 (491-572)||(16673-16754)
[»] scaffold0152 (2 HSPs)
scaffold0152 (491-572)||(20909-20990)
scaffold0152 (491-572)||(28811-28892)
[»] scaffold0110 (1 HSPs)
scaffold0110 (488-600)||(39276-39388)
[»] scaffold1504 (1 HSPs)
scaffold1504 (501-600)||(1315-1414)
[»] scaffold0573 (2 HSPs)
scaffold0573 (525-619)||(8837-8931)
scaffold0573 (139-222)||(9271-9354)
[»] scaffold0246 (2 HSPs)
scaffold0246 (503-600)||(1367-1464)
scaffold0246 (541-599)||(25642-25700)
[»] scaffold0013 (3 HSPs)
scaffold0013 (501-573)||(89307-89379)
scaffold0013 (35-132)||(89795-89892)
scaffold0013 (139-226)||(89688-89776)
[»] scaffold0347 (1 HSPs)
scaffold0347 (488-578)||(15132-15226)
[»] scaffold0433 (1 HSPs)
scaffold0433 (550-600)||(390-440)


Alignment Details
Target: chr3 (Bit Score: 356; Significance: 0; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 16 - 399
Target Start/End: Complemental strand, 53836543 - 53836160
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53836543 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 53836444  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  53836443 tttcataagtctctaaagtctacccatcccaaaaaggaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttctt 53836344  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactca 315  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  53836343 cgaaaggtcaatcttctaaagttccataacaccattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactct 53836244  T
Q  316 aagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  53836243 aagaaaatgatatgaaatgtttcacttcagtaagcttaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttg 53836160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 16 - 399
Target Start/End: Complemental strand, 49296699 - 49296317
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49296699 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 49296600  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  49296599 tttcataagtctctaaagtctacccatcccaaaaataaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaagtaatttctt 49296500  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactca 315  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49296499 cgaaaggtcaatcttctaaagtttcataacaccattctcatctatatcttcatcttcggaaacctaatgtttcattcgctcccctgttcttgaaaactca 49296400  T
Q  316 aagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  49296399 aagaaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgt-aagctagaaagtaaatatgttttcatttgggcttg 49296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 446 - 630
Target Start/End: Complemental strand, 49296270 - 49296077
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  49296270 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaacttttcgattttaccag 49296171  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  49296170 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 49296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 449 - 630
Target Start/End: Complemental strand, 8598811 - 8598620
Alignment:
Q  449 aggagtaaactcgcaaaaa-cggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaa 547  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8598811 aggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaa 8598712  T
Q  548 atcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  8598711 atcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 8598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 447 - 630
Target Start/End: Complemental strand, 53836115 - 53835923
Alignment:
Q  447 acaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccaga 546  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53836115 acaggagtaaactcgcaaaaacggttaacttgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccaga 53836016  T
Q  547 aatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||         ||| ||||||||| |||||||||||||||||||||||||    
T  53836015 aatcaagtttacctccaagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgaattgacacgcgatttgtggaacattg 53835923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 449 - 630
Target Start/End: Original strand, 22489434 - 22489615
Alignment:
Q  449 aggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaa 548  Q
    |||||||| || ||||||||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  22489434 aggagtaacctagcaaaaacggtaaactcgctcgacttcatacgagtttactgagtgttaactcggtcaaactcgttaaaccttccgattttaccagaaa 22489533  T
Q  549 tcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||||||||| || || ||||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||||    
T  22489534 tcgagtttacatctgatttaacacgtttttggcacctaaacacgtaaactcgtcgagttgacacacgatttgtggaacattg 22489615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 273 - 399
Target Start/End: Original strand, 22489271 - 22489396
Alignment:
Q  273 ggaaacctaatgtttcattcgctcccctgttcttgaaaactcaaagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctata 372  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||| |||||||||||||| ||| |    
T  22489271 ggaaacctaacgtttcattcgctcccctgttcttgaaaactcagagaaaatgctatgaaatgtttcactttagtaagctaaaacgtgttgtaaatctaga 22489370  T
Q  373 aagtaaatatgttttcatttgggcttg 399  Q
    ||||| | | | |||||||||||||||    
T  22489371 aagtaga-aaggtttcatttgggcttg 22489396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 505 - 630
Target Start/End: Complemental strand, 25049967 - 25049841
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccg 603  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| |||| | ||||||| ||||| ||||| ||    
T  25049967 gttaactcgagtcaaactcatcaaacattccgattttactagaaatcgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcggcg 25049868  T
Q  604 agttgacacgcgatttgtggaacattg 630  Q
    |||| |||| |||||||||||||||||    
T  25049867 agttaacactcgatttgtggaacattg 25049841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 20833456 - 20833344
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||  ||||||||||| ||||||||||| |||| | ||||||    
T  20833456 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaa 20833357  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  20833356 aaacgtaaactcg 20833344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 26107888 - 26107776
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||||||| | |||| | ||||||    
T  26107888 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattgtaccagaaatcgagtttacctcagagttaacatgatttttgtacctaa 26107789  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  26107788 aaacgtaaactcg 26107776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 48379709 - 48379597
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||| || |||||||| |||| | ||||||    
T  48379709 acacgagtttaccgagtgttaactcagtcaaactcgttaagccttccgattttaccagaaatcgagtttacctcagaattaacacgatttttgtacctaa 48379610  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  48379609 aaacgtaaactcg 48379597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 488 - 578
Target Start/End: Complemental strand, 33693368 - 33693278
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||||| |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  33693368 acacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaatcgagtttacctccaagttaacacgatttt 33693278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 503 - 600
Target Start/End: Original strand, 9818568 - 9818665
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  9818568 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 9818665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 49458470 - 49458358
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||||||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||   ||||||    
T  49458470 acacgagtttactgagtgttaatttggtcaaactcgtcaaaccttccgattttaccagaaatcgagtttacttcagagttaacacaattttgatacctaa 49458371  T
Q  588 acacgtagactcg 600  Q
    ||||||| |||||    
T  49458370 acacgtaaactcg 49458358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 50902950 - 50903062
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| |||||||||||| ||||||||||| |||| | || |||    
T  50902950 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacataa 50903049  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  50903050 aaacgtaaactcg 50903062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 488 - 594
Target Start/End: Complemental strand, 16155276 - 16155170
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||| |||||| || ||| |||||||||||| ||||||||||| |||| | ||||||    
T  16155276 acacgagtttactgagtgttaactcggtcaaactcgtcaaaccttccaattttatcaaaaaccgagtttacctcagagttaacacgattttggtacctaa 16155177  T
Q  588 acacgta 594  Q
    | |||||    
T  16155176 aaacgta 16155170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 22488583 - 22488685
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgct-----taacttagtatcaaaatagaaaaattaacacacaaaagc 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||     | | |||||||||||||||||||||||||||| ||||||    
T  22488583 atagacttaattataaatgcaaagtataccaaaccaccataaaaaagtgatatgctccctcttaattagtatcaaaatagaaaaattaacacaaaaaagc 22488682  T
Q  111 ata 113  Q
    |||    
T  22488683 ata 22488685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 488 - 594
Target Start/End: Complemental strand, 37455406 - 37455300
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  37455406 acacgagtttagtgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 37455307  T
Q  588 acacgta 594  Q
    | |||||    
T  37455306 aaacgta 37455300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 52810917 - 52810805
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||| ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||  |||||||||||| ||||||||||  |||| | ||||||    
T  52810917 acacaagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaacccgagtttacctcagagttaacacaatttttgtacctaa 52810818  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  52810817 aaacgtaaactcg 52810805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 54629410 - 54629298
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||||||||||||||| | |||||||||| |||| || || ||||| ||||||||||||||||||| ||||||||||| |||| | ||||||    
T  54629410 acacgagtttactgagtgttaactgaatcaaactcgttaaacctttcgcttttatcagaaatcgagtttacctcagagttaacacgatttttgtacctaa 54629311  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  54629310 aaacgtaaactcg 54629298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 491 - 578
Target Start/End: Original strand, 21386476 - 21386563
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    ||||||||| |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||| ||||    
T  21386476 cgagtttaccgagtgtcaactcggtcaaactcgtcaaacttttcgattttaccagaaatcgagtttacctctaagttaacacgatttt 21386563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 39038646 - 39038543
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaaca 590  Q
    ||||||||| ||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||  |||| | ||||||| |    
T  39038646 cgagtttaccgagtgttaacttagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacaccatttttgtacctaaaaa 39038547  T
Q  591 cgta 594  Q
    ||||    
T  39038546 cgta 39038543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 493 - 588
Target Start/End: Original strand, 51737333 - 51737428
Alignment:
Q  493 agtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||||||| ||||| |||||||||||| ||||||||||| |||| | |||||||    
T  51737333 agtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaa 51737428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 594
Target Start/End: Original strand, 31645902 - 31646008
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||| | |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  31645902 acacgagtttaccgagtgttaactcagtcaaactctttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 31646001  T
Q  588 acacgta 594  Q
    | |||||    
T  31646002 aaacgta 31646008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 471 - 600
Target Start/End: Original strand, 4962703 - 4962832
Alignment:
Q  471 taaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaac 570  Q
    ||||||||  ||| || ||| |||||||| |||||||||||| |||||||||||||||| || |||||||||  |||||||||||||||||| |||||||    
T  4962703 taaactcggtcgagtttacatgagtttaccgagtgttaactcggtcaaactcgtcaaacctttcgattttacttgaaatcgagtttacctccaagttaac 4962802  T
Q  571 acgtttttagcacctaaacacgtagactcg 600  Q
    ||| ||||   ||||||| ||||| |||||    
T  4962803 acgattttgatacctaaaaacgtaaactcg 4962832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 501 - 594
Target Start/End: Original strand, 52617626 - 52617719
Alignment:
Q  501 gagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||| |||| | ||||||| |||||    
T  52617626 gagtgttaacttagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgta 52617719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 491 - 599
Target Start/End: Complemental strand, 18750199 - 18750091
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaaca 590  Q
    ||||||||| |||||||||||||||||||||||| || | |||| ||||||||||||| |||||||||||| ||||||||| | |||| | ||||||| |    
T  18750199 cgagtttaccgagtgttaactcagtcaaactcgttaagccttccaattttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaa 18750100  T
Q  591 cgtagactc 599  Q
    |||| ||||    
T  18750099 cgtaaactc 18750091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 40897690 - 40897590
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| |||||| |||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  40897690 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaa 40897591  T
Q  588 a 588  Q
    |    
T  40897590 a 40897590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 50761741 - 50761853
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||  ||||||||||||||||||||||| |||| |||| |||| |||||||||| | |||||||| ||||||||||| |||| | ||||||    
T  50761741 acacgagtttacctagtgttaactcagtcaaactcgttaaaccttccaatttcaccagaaatctattttacctcagagttaacacgatttttgtacctaa 50761840  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  50761841 aaacgtaaactcg 50761853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 578
Target Start/End: Complemental strand, 7665720 - 7665613
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtta 568  Q
    |||||||||  ||| || |||||||||||| ||||  |||||| ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  7665720 gtaaactcggtcgagtttacacgagtttaccgagt--taactctagtcaaactcgtcaaatattccgattttaccaaaaatcgagtttacctccgagtta 7665623  T
Q  569 acacgttttt 578  Q
    ||||| ||||    
T  7665622 acacgatttt 7665613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 488 - 578
Target Start/End: Original strand, 36673793 - 36673883
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||||  |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| ||||    
T  36673793 acacgagtttatcgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttt 36673883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 23753030 - 23753130
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||||||||||||| || |||| |||| ||||||||| ||| ||| |||||||| ||||||||||| |||| | ||||||    
T  23753030 acacgagtttaccgagtgttaactcagtcaaactggttaaaccttccaattttaccaaaaaccgattttacctcagagttaacacgatttttgtacctaa 23753129  T
Q  588 a 588  Q
    |    
T  23753130 a 23753130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 34483739 - 34483823
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||  ||||||||||||| ||| |||||||| ||||||||||    
T  34483739 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttcaaattttaccagaaaccgattttacctcagagttaacac 34483823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 488 - 599
Target Start/End: Original strand, 7437560 - 7437671
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||| |||||||||  || || |||||||||||||| ||| |||||||| ||||| ||||||||| |||| | ||||||    
T  7437560 acacgagtttaccgagtgttaactcggtcaaactcaccataccttccgattttaccaaaaaccgagtttatctccgtgttaacacgattttggtacctaa 7437659  T
Q  588 acacgtagactc 599  Q
    ||| ||| ||||    
T  7437660 acaagtaaactc 7437671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 491 - 600
Target Start/End: Complemental strand, 17946780 - 17946675
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaaca 590  Q
    ||||||||| |||||||||||||    ||||||| |||| |||||||||||||||||| |||||||||||| ||||||||| | |||| | ||||||| |    
T  17946780 cgagtttaccgagtgttaactca----aactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaa 17946685  T
Q  591 cgtagactcg 600  Q
    |||| |||||    
T  17946684 cgtaaactcg 17946675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 21385965 - 21386183
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||| ||| ||| | ||| |||||||||| ||||||| |||  | |||||| ||||||| ||||||||| |||||||||| |||||||  ||| ||||    
T  21385965 gacttaattacaaaggaaaattataccaaactaccataataaaacgttatgctcaacttagcatcaaaatacaaaaattaacgcacaaaataataagttt 21386064  T
Q  119 cataagtctcta-----aagtc-------tacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattagg 206  Q
    ||||||||||||     |||||        | |||||| |||||| ||||||||||||||  |||| |||  ||||||||| ||||||||| ||| |||     
T  21386065 cataagtctctaagtttaagtcatccataaaaccatccgaaaaagcaagtttcacaagttcgtaaagttgttaataaaactgtccaaaaaataaactagt 21386164  T
Q  207 taatttcttcgaaaggtca 225  Q
    |||||||||| ||||||||    
T  21386165 taatttcttcaaaaggtca 21386183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 517 - 600
Target Start/End: Complemental strand, 43173010 - 43172927
Alignment:
Q  517 aaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||| |||||| |||| | |||||||||| || |||||    
T  43173010 aaactcttcaaacctttcgattttaccagaaatcgagtttacctccgagtcaacacgattttggtacctaaacacataaactcg 43172927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 490 - 600
Target Start/End: Original strand, 44905498 - 44905608
Alignment:
Q  490 acgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaac 589  Q
    |||||||||| ||||||||||||||||||| |||| || | ||| |||||||||||||| |||| ||||||| || |||||||| |||| | ||||||      
T  44905498 acgagtttaccgagtgttaactcagtcaaattcgttaagccttctgattttaccagaaaccgagattacctcagaattaacacgatttttgtacctaaga 44905597  T
Q  590 acgtagactcg 600  Q
    ||||| |||||    
T  44905598 acgtaaactcg 44905608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 1666457 - 1666392
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||||||||||| ||||||||| |||||||||| ||||||| |||| |||||||||||||||||    
T  1666457 tatgcttaacttagcatcaaaatacaaaaattaacgcacaaaatcataagtttcataagtctctaa 1666392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 558
Target Start/End: Complemental strand, 27261490 - 27261435
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttac 558  Q
    ||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  27261490 gtgttaactcagtcaaattcgtcaaactttccgatttcaccaaaaatcgagtttac 27261435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 223
Target Start/End: Original strand, 4962208 - 4962403
Alignment:
Q  40 tataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa-----agt 134  Q
    |||||||||| ||| ||| ||| || |||| | ||||||| ||||||||| |||||||||| ||||||| |||| |||||| ||||||||||     ||     
T  4962208 tataccaaactaccgtaataaaatgttatgttcaacttagcatcaaaatacaaaaattaacgcacaaaatcataagtttcacaagtctctaagtttaagc 4962307  T
Q  135 ctacc-------catcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggt 223  Q
    || ||       ||||| |||||| ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| ||||||    
T  4962308 cttccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgtcaataaaactatctaaaaaataaactagttaatttcttcaaaaggt 4962403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 37832669 - 37832572
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| |||||||||||||||||||| ||||| |||| |||   |||||| |||||| || ||||||||||  |||||||| ||||| |||||    
T  37832669 gtgttaactcggtcaaactcgtcaaactttctgatttcaccaaaaactaagtttatctccgaatttacacgtttttgccacctaaaaacgtaaactcg 37832572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 572
Target Start/End: Original strand, 47467415 - 47467484
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||| ||||||||||||||| ||| |||||| |||| ||| ||||||||||| |||||||||||    
T  47467415 gtgttaactcggtcaaactcgtcaaaattttcgatttcaccaaaaaccgagtttaccttcgagttaacac 47467484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 505 - 572
Target Start/End: Original strand, 45602422 - 45602490
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||| ||||||||||||||||| || |||||||||||||||| |||||||||| |||||| ||||    
T  45602422 gttaactcgagtcaaactcgtcaaacatttcgattttaccagaaattgagtttacctacgagttgacac 45602490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 43173394 - 43173307
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||| ||||  |||| |||  |||||||||||| |||||| ||||||| |||||||||| |||||||||    
T  43173394 ccatccaaaaaagcaagtttcaccagttcctaaagttgttaataaaactatctaaaaaataaattagttaatttcttcaaaaggtcaa 43173307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 557
Target Start/End: Complemental strand, 49293900 - 49293846
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagttta 557  Q
    ||||||| || |||||||||||||||||||||||||| |||| ||||||||||||    
T  49293900 gtgttaattcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagttta 49293846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 49458942 - 49458770
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctcta-----aagtc-------tacccatcccaaaaagaa 153  Q
    |||||| ||||||| ||||||||| |||||||||| ||||||| ||||  |||||||||||||||     |||||        | |||||| |||||  |    
T  49458942 tatgctcaacttagcatcaaaatacaaaaattaacgcacaaaatcataaatttcataagtctctaagtttaagtcatccataaaaccatccaaaaaatca 49458843  T
Q  154 agtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  49458842 agtttcacaagttcctaaagttgttaataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 49458770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 33693757 - 33693670
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||  |||||||||| |||||||||    
T  33693757 ccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaactatctaaaaaataaactacttaatttcttcaaaaggtcaa 33693670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 518 - 593
Target Start/End: Original strand, 53645332 - 53645407
Alignment:
Q  518 aactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgt 593  Q
    |||||||||||||||||||||| |||| |||  ||||||||||| ||||| | ||||||||  |||||||| ||||    
T  53645332 aactcgtcaaactttccgatttcaccaaaaactgagtttacctctgagtttatacgtttttgccacctaaaaacgt 53645407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 588
Target Start/End: Original strand, 2118484 - 2118526
Alignment:
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  2118484 aaatcgagtttaccttcgagttaacacgttttttgcacctaaa 2118526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 7437051 - 7437129
Alignment:
Q  35 caaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcata 113  Q
    |||| |||| ||||| ||||||| |||  | |||||||||||||| ||||||||| |||||||||| ||||||| ||||    
T  7437051 caaattatatcaaactaccataataaaacgttatgcttaacttagcatcaaaatacaaaaattaacgcacaaaatcata 7437129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 33693827 - 33693777
Alignment:
Q  81 atcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    ||||||||| |||||||||| ||||||| |||| |||||||||||||||||    
T  33693827 atcaaaatacaaaaattaacgcacaaaatcataagtttcataagtctctaa 33693777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 600
Target Start/End: Original strand, 19386895 - 19386991
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| ||||||||| ||| || |||| |||||| ||  ||| |||||||| ||||||||||||| |||||  |||||||| ||||| |||||    
T  19386895 gtgttaactcggtcaaactc-tcagacattccaattttatcaataattgagtttacatccgagttaacacatttttgacacctaaatacgtaaactcg 19386991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 40064375 - 40064278
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||  |||||| |||||||||||| |||||| |||| |||   | ||||||||| |||| ||||||||||  |||||||| ||||| |||||    
T  40064375 gtgttaacttggtcaaattcgtcaaacttttcgatttcaccaaaaactaaatttacctccaagtttacacgtttttgccacctaaaaacgtaaactcg 40064278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 491 - 548
Target Start/End: Complemental strand, 42736416 - 42736359
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaa 548  Q
    ||||||||| || |||||||||  ||||||||||||||||||  ||||||||||||||    
T  42736416 cgagtttaccgaatgttaactcgatcaaactcgtcaaactttttgattttaccagaaa 42736359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 27162938 - 27162864
Alignment:
Q  20 acttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaa 95  Q
    ||||| |||||||  ||||||||||| ||||||||||| |||||| ||||| | |||||| ||||||||| |||||    
T  27162938 acttaattataaagacaaagtatacccaaccaccataataaagtgttatgc-tcacttagcatcaaaataaaaaaa 27162864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 30238192 - 30238290
Alignment:
Q  153 aagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaat-cttctaaagttccataacatcatt 251  Q
    |||||||||| ||||  ||| |||  |||||| |||||||||||| ||| ||| |||||| ||| |||| ||||| ||||||||||| ||||||||||||    
T  30238192 aagtttcacaggtttcaaaagttgttaataaacctatccaaaaaataaactagttaattt-ttcaaaagttcaatccttctaaagtttcataacatcatt 30238290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 503 - 600
Target Start/End: Original strand, 30238499 - 30238597
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacg-tttttagcacctaaacacgtagactcg 600  Q
    ||||||| || ||||||||| |||||| || || |||| | | ||| | | |||||||||||||||||||| ||||| ||||||||| ||||| |||||    
T  30238499 gtgttaattcggtcaaactcatcaaacatttcgtttttcctaaaaaccaaatttacctccgagttaacacgttttttcgcacctaaaaacgtaaactcg 30238597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 356; Significance: 0; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 16 - 399
Target Start/End: Original strand, 11578616 - 11578999
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11578616 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 11578715  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11578716 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcataagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttctt 11578815  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactca 315  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  11578816 cgaaaggtcaatcttctaaagttccataacaccattctcatctatatcttcatcttcggaaacataatgtttcattcgctcccctgttcttgaaaactca 11578915  T
Q  316 aagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11578916 aagaaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttg 11578999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 16 - 399
Target Start/End: Complemental strand, 41354026 - 41353643
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41354026 atagacttacttatatatgcaaagtaaaccaaactaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 41353927  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41353926 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttctt 41353827  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactca 315  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  41353826 cgaaaggtcaatcttctaaagttccataacatcattctcatttatatcttcatcttcggaaacctaatgtttcattcactcccctgttcttgaaaactca 41353727  T
Q  316 aagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41353726 aagaaaatgatatgaaatgtttcacttcagtaagttgaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttg 41353643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 16 - 399
Target Start/End: Complemental strand, 26758221 - 26757838
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26758221 atagacttacttataaatgcaaagtgtagaaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 26758122  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatcca-aaaaacaaattaggtaatttct 214  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  26758121 tttcataagtctctaaagtctacccatcccaaaaacaaagtttcacaaatttataaacttgagaataaaactatccataaaaacaaactaggtaatttct 26758022  T
Q  215 tcgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactc 314  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  26758021 tcgaaaggtcaatcttctaaagttccataacaccattctcatctatatcttcatcttcgaaaacctaatgtttcattcgctcccctgttcttgaaaactc 26757922  T
Q  315 aaagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||    
T  26757921 aaagaaaatgatatgaaatgtttcacttgagtaagctgaaacatgttgt-aagctagaaagtaaatatgttttcatttgggcttg 26757838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 16 - 370
Target Start/End: Complemental strand, 8147948 - 8147593
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaa-gtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatag 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8147948 atagacttacttataaatgcaaagtataccaaaccaccataaaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatag 8147849  T
Q  115 gtttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttct 214  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  8147848 gtttcataagtctctaaagtctacccatcccaaaaagaaagttttacaagtttctaaacttgagaataaaactatccaaaaaccaaactaggtaatttct 8147749  T
Q  215 tcgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactc 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8147748 tcgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatcttcggaaacctaatgtttcattcgctcccctgttcttgaaaactc 8147649  T
Q  315 aaagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagcta 370  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  8147648 aaagaaaatgatatgaaatgtttcacttaagtaagttgaaacgtgttgtaaagcta 8147593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 16 - 370
Target Start/End: Original strand, 1242797 - 1243150
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1242797 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 1242896  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  1242897 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaaacaaactaggtaatttctt 1242996  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactca 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||     
T  1242997 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatcttcggaaacttaatgtttcattcgct-ccctgttcttgaaaactcc 1243095  T
Q  316 aagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagcta 370  Q
    ||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  1243096 aaggaaataatatgaaatgtttcacttcagtaagctgaaacgagttgtaaagcta 1243150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 446 - 630
Target Start/End: Original strand, 11579046 - 11579230
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11579046 tacaggagtaaactcgcaaaaacggtgaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccag 11579145  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  11579146 aaatcaaatttacctccgagttaacacgtttttagcacctaaacacgtaaactcgccgagttgacatgcgatttgtggaacattg 11579230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 446 - 630
Target Start/End: Complemental strand, 41353596 - 41353403
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41353596 tacaggagtaaactcgtaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccag 41353497  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  41353496 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 41353403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 446 - 630
Target Start/End: Original strand, 1243252 - 1243445
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1243252 tacaggagtaaactcgctaaaacggtaaactcgcccgatttcacatgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccag 1243351  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  1243352 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactaggtaaactcgccgagttgacacgcgatttgtggaacattg 1243445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 446 - 630
Target Start/End: Complemental strand, 26757790 - 26757597
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26757790 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccag 26757691  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  26757690 aaatcgagtttacctctgagttaactcgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 26757597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 446 - 630
Target Start/End: Complemental strand, 4005243 - 4005049
Alignment:
Q  446 tacaggagtaaactcgcaaaaa-cggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttacca 544  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4005243 tacaggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttacca 4005144  T
Q  545 gaaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  4005143 gaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 4005049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 446 - 630
Target Start/End: Complemental strand, 8147492 - 8147299
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  8147492 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttgcaattttaccag 8147393  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||| ||||||||||||||||||||||||||||    
T  8147392 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgctgagttgacacgcgatttgtggaacattg 8147299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 16 - 270
Target Start/End: Original strand, 5208789 - 5209024
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5208789 atagacttaattataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataag 5208888  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    ||||||||||| |         | |||||||||||| ||| |    || ||      ||| ||||||||||||||||||||||||| |||||||||||||    
T  5208889 tttcataagtcac---------ctcatcccaaaaagcaaggt----aattt------cttcagaataaaactatccaaaaaacaaactaggtaatttctt 5208969  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatct 270  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5208970 caaaaggtcaatcttctaaagttccataacatcattctcatctatgtcttcatct 5209024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 446 - 630
Target Start/End: Complemental strand, 9192200 - 9192006
Alignment:
Q  446 tacaggagtaaactcgcaaaaa-cggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttacca 544  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  9192200 tacaggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaactcgtcaaactttctgattttacca 9192101  T
Q  545 gaaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  9192100 gaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 9192006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 449 - 630
Target Start/End: Complemental strand, 51107065 - 51106874
Alignment:
Q  449 aggagtaaactcgcaaaaa-cggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaa 547  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51107065 aggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaa 51106966  T
Q  548 atcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||||| ||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  51106965 atcgagttttcctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 51106874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 470 - 594
Target Start/End: Original strand, 5209338 - 5209462
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    ||||||||| | ||||| |||| |||||| |||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  5209338 gtaaactcggctgattttacacaagtttattgagtgttaactcgatcaaactcgtcaaactttctgatttcaccagaaatcgagttgacctccgagttaa 5209437  T
Q  570 cacgtttttagcacctaaacacgta 594  Q
    |||| |||| | |||||||||||||    
T  5209438 cacgattttggtacctaaacacgta 5209462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 45273127 - 45273015
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||  |||| | ||||||    
T  45273127 acacgagtttaccgagtgttaactcagtcaaactcgtcaaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaa 45273028  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  45273027 aaacgtaaactcg 45273015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 47371563 - 47371675
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  47371563 acacgagtttaccgagtgttaactcggtcaaactcggcaaaccttccgattttaccagaaatcgagtttacctccgagttaacacgattttggtacctaa 47371662  T
Q  588 acacgtagactcg 600  Q
      ||||| |||||    
T  47371663 gtacgtaaactcg 47371675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 505 - 599
Target Start/End: Complemental strand, 1108468 - 1108374
Alignment:
Q  505 gttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactc 599  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||| |||||||| ||||| ||||    
T  1108468 gttaactcagtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttaccacctaaaaacgtaaactc 1108374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 5494736 - 5494848
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||  |||||||||||||||||||||| |||||| ||| |||||||||||||| |||||||||||| ||||||||||| |||| | ||||||    
T  5494736 acacgagtttatcgagtgttaactcagtcaaactcatcaaaccttctgattttaccagaaaccgagtttacctcagagttaacacgattttggtacctaa 5494835  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  5494836 aaacgtaaactcg 5494848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 46328546 - 46328434
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||||| |||||||||| |||| ||||||||||| |||||| |||||||||||| ||||||||||| |||| | ||||||    
T  46328546 acacgagtttaccgagtgttaactcaatcaaactcgttaaaccttccgattttaacagaaaccgagtttacctcagagttaacacgatttttgtacctaa 46328447  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  46328446 aaacgtaaactcg 46328434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 7798618 - 7798521
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||| |||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  7798618 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 7798521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 470 - 631
Target Start/End: Original strand, 32760069 - 32760230
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    |||||||||  ||| || ||||||||||| ||||||||||||| ||||||||||| || | | |||||||||| ||||| |||||||||||| |||||||    
T  32760069 gtaaactcgatcgagtttacacgagtttagtgagtgttaactcggtcaaactcgttaagcctcccgattttactagaaaccgagtttacctcagagttaa 32760168  T
Q  570 cacgtttttagcacctaaacacgtagactcgccgagttgacacgcgatttgtggaacattgc 631  Q
    |||| |||| | ||||||| ||||| ||||   | ||| |||| ||||||| ||||||||||    
T  32760169 cacgattttggtacctaaaaacgtaaactcagagtgttaacactcgatttgcggaacattgc 32760230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 6313136 - 6313036
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  6313136 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 6313037  T
Q  588 a 588  Q
    |    
T  6313036 a 6313036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 15834672 - 15834772
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||| ||||||| |||||||| ||||||||||| |||| | ||||||    
T  15834672 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaa 15834771  T
Q  588 a 588  Q
    |    
T  15834772 a 15834772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 25612652 - 25612552
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  25612652 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 25612553  T
Q  588 a 588  Q
    |    
T  25612552 a 25612552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 29396072 - 29396172
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  29396072 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 29396171  T
Q  588 a 588  Q
    |    
T  29396172 a 29396172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 488 - 599
Target Start/End: Original strand, 48966479 - 48966590
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||| ||||||| |||||||||||||||| |||| |||| | |||||||| |||||||||| ||||||||||| |||| | ||||||    
T  48966479 acacgagtttaccgagtattaactcggtcaaactcgtcaaaccttccaatttcatcagaaatcaagtttacctcagagttaacacgattttggtacctaa 48966578  T
Q  588 acacgtagactc 599  Q
    ||||||| ||||    
T  48966579 acacgtaaactc 48966590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 503 - 593
Target Start/End: Original strand, 33886863 - 33886953
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgt 593  Q
    ||||| |||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||  |||||||| ||||    
T  33886863 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgt 33886953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 503 - 593
Target Start/End: Complemental strand, 33957387 - 33957297
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgt 593  Q
    ||||| |||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||  |||||||| ||||    
T  33957387 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgt 33957297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 8140871 - 8140983
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||| ||||||| |||||||||||||||||||||| | |||| |||  ||||||||||||||||| |||||||| ||||||||||| |||| | ||||||    
T  8140871 acacaagtttaccgagtgttaactcagtcaaactcattaaaccttctaattttaccagaaatcgattttacctcagagttaacacgatttttgtacctaa 8140970  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  8140971 aaacgtaaactcg 8140983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 18799012 - 18798912
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||| ||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  18799012 acacgagtttaccgagtgttaactcagtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 18798913  T
Q  588 a 588  Q
    |    
T  18798912 a 18798912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 470 - 586
Target Start/End: Original strand, 42304470 - 42304586
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    |||||||||  ||| || ||||||||||||  ||||||||||| ||||||||||| |||| |||| ||||||||||||| ||||||||||||||| ||||    
T  42304470 gtaaactcggtcgagtttacacgagtttacctagtgttaactcggtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctccgaattaa 42304569  T
Q  570 cacgtttttagcaccta 586  Q
    || | |||| |||||||    
T  42304570 catgattttggcaccta 42304586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 599
Target Start/End: Original strand, 48177080 - 48177192
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag-aaatcgagtttacctccgagttaacacgtttttagcaccta 586  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||| ||| |||||||| ||||||||||| ||||   |||||    
T  48177080 acacgagtttactgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaaccgattttacctcagagttaacacgatttttctaccta 48177179  T
Q  587 aacacgtagactc 599  Q
    || ||||| ||||    
T  48177180 aaaacgtaaactc 48177192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 591
Target Start/End: Original strand, 49453048 - 49453152
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacg-tttttagcaccta 586  Q
    |||||||||||| |||||||||||| |||||||| ||||||| ||  |||||| |||||||||||||||||||| ||||||||||| ||||| | |||||    
T  49453048 acacgagtttaccgagtgttaactcggtcaaacttgtcaaaccttatgatttttccagaaatcgagtttacctcagagttaacacgatttttggtaccta 49453147  T
Q  587 aacac 591  Q
    |||||    
T  49453148 aacac 49453152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 34019237 - 34019140
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| ||||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||| |||||  ||||| || ||||| |||||    
T  34019237 gtgttaactcggtcaacctcgtcaaactttccgatttcaccaaaaatcgaatttacctccgagttaacacatttttgccaccttaaaacgtaaactcg 34019140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 491 - 588
Target Start/End: Original strand, 35177201 - 35177298
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||||||  |||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||| || |||||||| |||| | |||||||    
T  35177201 cgagtttatcgagtgttaactcggtcaaactcgtcaatccttccgattttatcagaaatcgagtttacctctgaattaacacgattttggtacctaaa 35177298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 572
Target Start/End: Complemental strand, 15927416 - 15927348
Alignment:
Q  504 tgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||    
T  15927416 tgttaactcagtcaaactcgtcaaactttccgattttatcagaaaccgaatttacctcagagttaacac 15927348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 25830887 - 25830999
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||  || || ||| |||| ||| ||||||||||| |||| | ||||||    
T  25830887 acacgagtttactgagtgttaactcagtcaaactcgttaaaccttccaattttattaggaaccgattttatctcagagttaacacgatttttgtacctaa 25830986  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  25830987 aaacgtaaactcg 25830999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 38535784 - 38535868
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||||| |||||||||||||||||||||||| ||   |||||||||||||||||| | |||||||||| ||||||||||    
T  38535784 acacgagtttaccgagtgttaactcagtcaaactcgttaagtcttccgattttaccagaaacccagtttacctcagagttaacac 38535868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 38558002 - 38558086
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||||| |||||||||||||||||||||||| ||   |||||||||||||||||| | |||||||||| ||||||||||    
T  38558002 acacgagtttaccgagtgttaactcagtcaaactcgttaagtcttccgattttaccagaaacccagtttacctcagagttaacac 38558086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 49231567 - 49231467
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||| ||||||| || |||||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||| ||||||||||| |||| | ||||||    
T  49231567 acacaagtttaccgattgttaacttagtcaaactcgttaaaccttccgattataccagaaaccgagtttacctcagagttaacacgatttttgtacctaa 49231468  T
Q  588 a 588  Q
    |    
T  49231467 a 49231467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 493 - 600
Target Start/End: Original strand, 3583549 - 3583656
Alignment:
Q  493 agtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacg 592  Q
    ||||||| |||||||||||| || |||||||||||||||||||||||||| ||||| ||||||||| ||  |||||||||| |||  | ||||||| |||    
T  3583549 agtttaccgagtgttaactcggttaaactcgtcaaactttccgattttactagaaaccgagtttacttctaagttaacacgatttcggtacctaaaaacg 3583648  T
Q  593 tagactcg 600  Q
    || |||||    
T  3583649 taaactcg 3583656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 34751575 - 34751650
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||| |||||||| | ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  34751575 gtgttaactcggtcaaacttggcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttttt 34751650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 25253646 - 25253526
Alignment:
Q  468 cggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtt 567  Q
    |||||||||||  ||| || ||| |||||||| || |||||||||||||||||||||||||  |||||| ||||||||||| ||| |||||||| |  ||    
T  25253646 cggtaaactcgatcgagtttacaagagtttaccgaatgttaactcagtcaaactcgtcaaatcttccgagtttaccagaaaccgaatttacctcagtatt 25253547  T
Q  568 aacacgtttttagcacctaaa 588  Q
    |||||| |||| | |||||||    
T  25253546 aacacgattttggtacctaaa 25253526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 32759557 - 32759665
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||| ||| ||| ||||| |||||||||| ||||||| |||  | |||||| ||||||| ||||||||| |||||||||| ||||||| |||| ||||    
T  32759557 gacttaattacaaaggcaaattataccaaactaccataataaaacgttatgctaaacttagcatcaaaatacaaaaattaacgcacaaaatcatatgttt 32759656  T
Q  119 cataagtct 127  Q
    |||||||||    
T  32759657 cataagtct 32759665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 51702155 - 51702071
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||   ||||||||||||| ||| |||||||| ||||||||||    
T  51702155 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttttaattttaccagaaaccgattttacctcagagttaacac 51702071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 600
Target Start/End: Complemental strand, 18954563 - 18954486
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||  |||||||| ||||| |||||    
T  18954563 gtcaaactttccgatttcaccaaaaaccgagtttacgtccgagttaacacgtttttgccacctaaaaacgtaaactcg 18954486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 505 - 600
Target Start/End: Original strand, 49971599 - 49971696
Alignment:
Q  505 gttaactc-agtcaaactcgtcaa-actttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||| ||||||||||||||| || || ||||||||||||||| |||||||||||||||||| ||||| |||| | ||||||| ||||| |||||    
T  49971599 gttaactcgagtcaaactcgtcaacacatttcgattttaccagaaaacgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcg 49971696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 508 - 600
Target Start/End: Original strand, 49236974 - 49237066
Alignment:
Q  508 aactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||| |||||||||||||||| || ||||||||||||||| |||| ||| |||||| |||||||| |||| | |||||||||| || |||||    
T  49236974 aactcggtcaaactcgtcaaacctttcgattttaccagaaaccgagcttaactccgaattaacacggttttggtacctaaacacataaactcg 49237066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 600
Target Start/End: Complemental strand, 52182443 - 52182347
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||| |||| |||||||||||| || ||||||||||||||||||| ||||||||||| || ||||| ||| || ||||||| ||||| |||||    
T  52182443 gttaactcgagtcgaactcgtcaaacatttcgattttaccagaaatcgaatttacctccgaattgacacgatttcagtacctaaaaacgtaaactcg 52182347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 8147592 - 8147539
Alignment:
Q  345 gtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  8147592 gtaagctgaaacgtgttgtaaagctagaaagtaaatatg-tttcatttgggcttg 8147539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 28403916 - 28404034
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    |||||||||  ||| || ||| |||||||| |||||||||||| |||||| ||||||||| || ||||||||  ||||| ||| ||||||| | ||||||    
T  28403916 gtaaactcggtcgagtttacatgagtttaccgagtgttaactcggtcaaattcgtcaaacatttcgattttattagaaaccgaatttaccttcaagttaa 28404015  T
Q  570 cacgtttttagcacctaaa 588  Q
    |||| |||| | |||||||    
T  28404016 cacgattttggtacctaaa 28404034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 558
Target Start/End: Complemental strand, 29219681 - 29219611
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttac 558  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| |||| |||||||| ||| |||||    
T  29219681 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaatttcaccagaaaccgattttac 29219611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 270
Target Start/End: Complemental strand, 226490 - 226270
Alignment:
Q  49 ccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctacccatcccaaa 148  Q
    ||||||||| |||| | |||| | ||||||| ||||||||| |||| |||||   ||||| |||| |||||||||| |||||||  | | |||    |||    
T  226490 ccaccataataaagagttatgttcaacttagcatcaaaatacaaaa-ttaacttgcaaaatcataagtttcataagactctaaa--ccatccaaattaaa 226394  T
Q  149 aagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaatctt--ctaaagttccataaca 246  Q
    ||| |||||||| |||||| |||| |||  |||||| ||||| |||||| ||| ||| |||||| ||| |||| ||||||||  |||||||| |||||||    
T  226393 aagcaagtttcataagtttctaaagttgttaataaacctatctaaaaaataaactagttaattttttcaaaagttcaatctttcctaaagtttcataaca 226294  T
Q  247 tcattctcatctatatcttcatct 270  Q
    ||||| |||||  | |||||||||    
T  226293 tcattatcatcggtgtcttcatct 226270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 630
Target Start/End: Complemental strand, 3593350 - 3593237
Alignment:
Q  517 aaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccgagttgacacgcga 616  Q
    ||||| ||||||| |||||||||||  ||||||||| |||||||||||||||||||| ||||   ||||||| |  || |||||  ||||| |||| |||    
T  3593350 aaacttgtcaaaccttccgattttattagaaatcgaatttacctccgagttaacacgattttgatacctaaaaatataaactcggagagttaacactcga 3593251  T
Q  617 tttgtggaacattg 630  Q
    |||| |||||||||    
T  3593250 tttgcggaacattg 3593237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 594
Target Start/End: Original strand, 27257871 - 27257952
Alignment:
Q  513 agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    ||||||||||||||||| |||||||||||||  ||||| |||||||||| ||||| ||||| |||| | ||||||| |||||    
T  27257871 agtcaaactcgtcaaacattccgattttaccgaaaatcaagtttacctcggagttgacacgattttggtacctaaaaacgta 27257952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 47371178 - 47371265
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||  |||| |||  |||||||| ||| |||||||||| ||| |||||||||| |||||||||    
T  47371178 ccatccaaaaaagcaagtttcacaagttcttaaagttgttaataaaacaatctaaaaaacaaactagttaatttcttcaaaaggtcaa 47371265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 46042492 - 46042306
Alignment:
Q  20 acttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttc 119  Q
    ||||| |||||||  ||||||||||  ||||| ||||| |||| | |||| ||||||||  ||||||||| |||||| |||   ||||| |||| |||||    
T  46042492 acttaattataaagacaaagtatacataaccatcataacaaagagttatgtttaacttaacatcaaaatacaaaaat-aacttgcaaaatcataagtttc 46042394  T
Q  120 ataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttc 213  Q
    |||||  ||||||      |||||| |||||| ||||||||||| ||| |||| |||  |||||| |||||||||||| ||| ||| |||||||    
T  46042393 ataagattctaaa------ccatccaaaaaagtaagtttcacaattttctaaagttgttaataaacctatccaaaaaataaactagttaatttc 46042306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 28403502 - 28403567
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||| ||||||| ||||||||| |||||||||| ||||||| ||||  ||||||||||||||||    
T  28403502 tatgctcaacttagcatcaaaatacaaaaattaacgcacaaaatcataattttcataagtctctaa 28403567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 49452584 - 49452649
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||| ||||||| ||||||||| |||||||||| ||| ||| |||| |||||||||||||||||    
T  49452584 tatgctcaacttagcatcaaaatacaaaaattaacgcaccaaatcataagtttcataagtctctaa 49452649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 49236606 - 49236693
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| ||||||||||||||| |||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||  |||||||||    
T  49236606 ccatccaaaaaagaaagtttcataagttcctaaagttgttaataaaactatctaaaaaataaactagttaatttctttaaaaggtcaa 49236693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 1243151 - 1243204
Alignment:
Q  345 gtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||    
T  1243151 gtaagctgaaacatgttgtaaagctagaaagtaaatatg-tttcatttgagcttg 1243204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 8122572 - 8122463
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||||||| ||| ||||| |||||||||| || || | |||  | |||||| ||||||| ||||||||| ||||||||||||   ||| |||| ||||    
T  8122572 gacttacttacaaaggcaaattataccaaactactattataaaacgttatgctcaacttagcatcaaaatacaaaaattaacac---aaatcataagttt 8122476  T
Q  119 cataagtctctaa 131  Q
    || ||||||||||    
T  8122475 cacaagtctctaa 8122463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 9322181 - 9322246
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | |||||||    
T  9322181 gtcaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaa 9322246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 25254107 - 25254042
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||| ||||||| ||||||| | |||||||| | ||||||| |||| |||||||||||||||||    
T  25254107 tatgctcaacttagcatcaaaaaacaaaaattagcgcacaaaatcataagtttcataagtctctaa 25254042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 47371061 - 47371154
Alignment:
Q  34 gcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtct 127  Q
    ||||| |||||||||| ||||||| |||    |||||| ||||||| ||||||| | |||||||||| |||||||  ||| |||||||||||||    
T  47371061 gcaaattataccaaactaccataataaaacattatgctcaacttagcatcaaaacataaaaattaacgcacaaaattataagtttcataagtct 47371154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 540
Target Start/End: Original strand, 28387093 - 28387145
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgatttt 540  Q
    |||||||||||| |||||||||||||||||||||| | |||| |||| |||||    
T  28387093 acacgagtttaccgagtgttaactcagtcaaactcattaaacattccaatttt 28387145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 35176884 - 35176964
Alignment:
Q  146 aaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||||||||||| ||||  |||  |||||||||||| |||||  |||||||  ||||||||| |||||||||    
T  35176884 aaaaagcaagtttcacaagttcataatgttgttaataaaactatctaaaaattaaattagtgaatttcttcaaaaggtcaa 35176964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 42303997 - 42304077
Alignment:
Q  146 aaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||||||||||||||||||  |||| ||   |||||||||||| |||||| ||| ||| |||||||||| ||| |||||    
T  42303997 aaaaagaaagtttcacaagttcctaaagttattaataaaactatctaaaaaataaagtagttaatttcttcaaaacgtcaa 42304077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 28403603 - 28403676
Alignment:
Q  153 aagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    ||||||||||||||  |||| |||  |||||||||||  |||||| ||| ||| |||||||||| |||||||||    
T  28403603 aagtttcacaagttcctaaagttgttaataaaactatttaaaaaataaactagttaatttcttcaaaaggtcaa 28403676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 3593728 - 3593644
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggt 223  Q
    |||||| |||||| |||||||||||||   |||| |||  |||||||||||| |||||| ||| | | |||||||||| ||||||    
T  3593728 ccatccaaaaaagtaagtttcacaagtccgtaaagttgttaataaaactatctaaaaaataaacttgttaatttcttcaaaaggt 3593644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 49452673 - 49452745
Alignment:
Q  144 ccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttc 216  Q
    |||||||  ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| ||||||||||    
T  49452673 ccaaaaaacaagtttcacaagttcctaaatttgttaataaaactatctaaaaaataaactagttaatttcttc 49452745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 549
Target Start/End: Complemental strand, 51902072 - 51902024
Alignment:
Q  501 gagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaat 549  Q
    ||||||||||||||||||||| || |||||||  ||||||| |||||||    
T  51902072 gagtgttaactcagtcaaacttgttaaacttttggattttatcagaaat 51902024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 345; Significance: 0; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 16 - 399
Target Start/End: Original strand, 37797634 - 37798018
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37797634 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataag 37797733  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaa-caaattaggtaatttct 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  37797734 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaaacaaactaggtaatttct 37797833  T
Q  215 tcgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactc 314  Q
    |||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37797834 tcgaaaggtcgatcttctaaagttccataacaccattatcatctatatcttcatcttcggaaacctaatgtttcattcgctcccctgttcttgaaaactc 37797933  T
Q  315 aaagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37797934 aaagaaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttg 37798018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 16 - 399
Target Start/End: Original strand, 28622683 - 28623066
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaa-aagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatag 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28622683 atagacttacttataaatgcaaagtataccaaaccaccataaaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatag 28622782  T
Q  115 gtttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttct 214  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  28622783 gtttcataagtctctaaagtctacccatcccaaaaagaaagttttacaagtttctaaacttgagaataaaactatccaaaaaacaaactaggtaatttct 28622882  T
Q  215 tcgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactc 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28622883 tcgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatcttcggaaacctaatgtttcattcgctcccctgttcttgaaaactc 28622982  T
Q  315 aaagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  28622983 aaagaaaatgatatgaaatgtttcacttaagtaagttgaaacgtgttgtaaagctagaaagtaaatatg-tttcatttgggcttg 28623066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 16 - 270
Target Start/End: Original strand, 5650292 - 5650543
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  5650292 atagacttaattataaatgcaaagcataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaactcacaaaagcataag 5650391  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    ||||||||||||||||   | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  5650392 tttcataagtctctaa---caacccatcccaaaaagcaagtttcacaagtttctaaacttgagaataaaactatcaaaaaaacaaattaggtaatttctt 5650488  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatct 270  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5650489 caaaaggtcaatcttctaaagttccataacatcattctcatctatgtcttcatct 5650543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 449 - 630
Target Start/End: Original strand, 7125114 - 7125305
Alignment:
Q  449 aggagtaaactcgcaaaa-acggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaa 547  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7125114 aggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaa 7125213  T
Q  548 atcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  7125214 atcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 7125305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 446 - 630
Target Start/End: Original strand, 28623114 - 28623307
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  28623114 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttgcaattttaccag 28623213  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacg---------tagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||         || |||||| ||||||||||||||||||||||||||||    
T  28623214 aaatcgagtttatctccgagttaacacgtttttagcacctaaacacgtaaactcgataaactcgctgagttgacacgcgatttgtggaacattg 28623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 446 - 600
Target Start/End: Original strand, 37798067 - 37798221
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||    
T  37798067 tacaggagtaaactcacaaaaacagtaaactcacccgatttcacacgagtttaccgagtgttaactcggtcaaactcgtcaaacttttcgattttaccag 37798166  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||| ||||||||||  ||||||||||||||||| ||  |||||||||| |||||    
T  37798167 aaattgagtttacctttgagttaacacgtttttaacagataaacacgtaaactcg 37798221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 470 - 594
Target Start/End: Original strand, 5651158 - 5651282
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||    
T  5651158 gtaaactcggccgattttacacgagtttactgagtgttaactcggtcaaactcgtcaaacttttcaatttcaccagaaatcgagtttacctccgagttaa 5651257  T
Q  570 cacgtttttagcacctaaacacgta 594  Q
    |||| |||| | |||||||||||||    
T  5651258 cacgattttggtacctaaacacgta 5651282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 503 - 600
Target Start/End: Original strand, 2675078 - 2675175
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  2675078 gtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 2675175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 4240107 - 4240219
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||  ||||||||||| |||| ||||||||||||||||||  ||||||||||| ||||||||||| |||| ||||||||    
T  4240107 acacgagtttaccgagtgttaactttgtcaaactcgttaaaccttccgattttaccagaaacggagtttacctcagagttaacacgatttttgcacctaa 4240206  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  4240207 aaacgtaaactcg 4240219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 21238763 - 21238838
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  21238763 gtgttaactcggtcaaactcgtcaaactttccgattttaccaaaaaccgagtttacctccgagttaacacgttttt 21238838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 503 - 594
Target Start/End: Original strand, 33892846 - 33892937
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    |||||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||  |||||||| |||||    
T  33892846 gtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgta 33892937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 491 - 600
Target Start/End: Original strand, 1460790 - 1460899
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaaca 590  Q
    ||||||||| |||||||||||||||||||||||| || | |||||||||||||||||| |||||||||||| ||||||||||  |||| | ||||||| |    
T  1460790 cgagtttaccgagtgttaactcagtcaaactcgttaagccttccgattttaccagaaaccgagtttacctctgagttaacacaatttttgtacctaaaaa 1460889  T
Q  591 cgtagactcg 600  Q
    |||| |||||    
T  1460890 cgtaaactcg 1460899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 4549899 - 4550011
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||| | |||| ||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  4549899 acacgagtttgcagagtattaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 4549998  T
Q  588 acacgtagactcg 600  Q
    ||||||| |||||    
T  4549999 acacgtaaactcg 4550011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 594
Target Start/End: Complemental strand, 5949672 - 5949566
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||| |||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  5949672 acacgtgtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 5949573  T
Q  588 acacgta 594  Q
    | |||||    
T  5949572 aaacgta 5949566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 13926492 - 13926380
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||| |||||||||| | |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  13926492 acacgagtttaccgagtgttaacttagtcaaactccttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 13926393  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  13926392 aaacgtaaactcg 13926380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 39852931 - 39852831
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||| ||||||| |||||||| ||||||||||| |||| | ||||||    
T  39852931 acacgagtttaccgagtgttaactccgtcaaactcgttaaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaa 39852832  T
Q  588 a 588  Q
    |    
T  39852831 a 39852831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 13999735 - 13999835
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||| |||  |||||||||| |||| | ||||||    
T  13999735 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttatctcaaagttaacacgatttttgtacctaa 13999834  T
Q  588 a 588  Q
    |    
T  13999835 a 13999835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 37014415 - 37014315
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||| ||||||||||| |||| || | ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  37014415 acacgagtttaccgagtgttaactcggtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 37014316  T
Q  588 a 588  Q
    |    
T  37014315 a 37014315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 488 - 578
Target Start/End: Original strand, 40013346 - 40013436
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||||| |||||||||||||||||| || || |||| |||| ||||||||||||| ||| |||||||| ||||||||||| ||||    
T  40013346 acacgagtttaccgagtgttaactcagtcaatcttgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttt 40013436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 29716380 - 29716490
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||| ||| ||| ||||| |||||||||| ||||||| ||| || |||||| ||||||| ||||||||| ||||||||  |||||||| |||| ||||    
T  29716380 gacttaattacaaaggcaaattataccaaactaccataataaaatgttatgctcaacttagcatcaaaatataaaaatta--acacaaaatcataagttt 29716477  T
Q  119 cataagtctctaa 131  Q
    |||||||||||||    
T  29716478 cataagtctctaa 29716490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 600
Target Start/End: Original strand, 16548850 - 16548946
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||| ||||||| ||||||||| || |||||||||||||||| ||||||||||||||||| ||||| |||| | ||||||| ||||| |||||    
T  16548850 gttaactcgagtcaaattcgtcaaacatttcgattttaccagaaattgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcg 16548946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 509 - 600
Target Start/End: Complemental strand, 34909683 - 34909592
Alignment:
Q  509 actcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||| ||||||||| |||||||||||||||| |||| | | ||||||||||||||| |||||||||||||  |||||||| ||||| |||||    
T  34909683 actcggtcaaactcctcaaactttccgatttcaccaaagaccgagtttacctccgaattaacacgtttttgccacctaaaaacgtaaactcg 34909592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 561
Target Start/End: Original strand, 1151932 - 1152005
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 561  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| || |||||    
T  1151932 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgatttcacctc 1152005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 588
Target Start/End: Complemental strand, 25868876 - 25868811
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||  ||||||||    
T  25868876 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaa 25868811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 599
Target Start/End: Original strand, 29716780 - 29716891
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||  |||||| || |  || |||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||| ||||   ||||||    
T  29716780 acacgagtttaccaagtgttcacccgatccaactcgtcaaaccttctgattttaccagaaatcaagtttaccttcgagttaacacgattttgatacctaa 29716879  T
Q  588 acacgtagactc 599  Q
    | ||||| ||||    
T  29716880 aaacgtaaactc 29716891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 505 - 600
Target Start/End: Complemental strand, 29758801 - 29758706
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||| | | |||||||||||||||||| ||||   ||||||| ||||| |||||    
T  29758801 gttaactcgagtcaaactcgtcaaacattccgattt-accagaaatcaaatctacctccgagttaacacgattttgatacctaaaaacgtaaactcg 29758706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 599
Target Start/End: Original strand, 16497741 - 16497836
Alignment:
Q  504 tgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactc 599  Q
    |||||| || |||||||||||||||| ||||||||| | || |||||||||||| ||  || ||||||| ||||| ||||||||| ||||| ||||    
T  16497741 tgttaagtcggtcaaactcgtcaaacattccgatttcagcaaaaatcgagtttatctttgaattaacacatttttggcacctaaaaacgtaaactc 16497836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 31913992 - 31913805
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||| |||||||  ||||||||||  ||||||||||| |||| | |||| ||||||||| |||||||||  |||||||||   | |||  ||| ||||    
T  31913992 gacttaattataaagacaaagtatacataaccaccataataaagagttatgtttaacttagcatcaaaata-caaaattaacttgc-aaattataagttt 31913895  T
Q  119 cataagtctctaaagtctacccatcccaaaaaga-aagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttc 213  Q
    |||||| |||||||      |||||| ||||| | ||||||||||||||| |||| |||  |||||| |||||||||||| ||| ||| |||||||    
T  31913894 cataagactctaaa------ccatccaaaaaacacaagtttcacaagtttttaaagttgttaataaacctatccaaaaaataaactagttaatttc 31913805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 503 - 599
Target Start/End: Original strand, 15286536 - 15286634
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttacc--agaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactc 599  Q
    |||||||||||||||||||||   |||||||||||||||||  | |||  ||||||| ||||||||| ||||| ||||  |||||||| ||||| ||||    
T  15286536 gtgttaactcagtcaaactcggtcaactttccgattttaccaaaaaaaaagagtttatctccgagtttacacgattttgacacctaaaaacgtaaactc 15286634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 578
Target Start/End: Complemental strand, 31913594 - 31913520
Alignment:
Q  504 tgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||  ||||| ||| | ||| || |||||| |||| ||||||||||||||||| ||||||||| |||||    
T  31913594 tgttaactcgatcaaattcgacgaacatttcgatttcaccaaaaatcgagtttacctccaagttaacacattttt 31913520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 15672705 - 15672770
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||||| |||||||||||||| ||||| |||||| ||  ||||| ||||| |||||| |||||||    
T  15672705 gtcaaacattccgattttaccataaatcaagtttatctttgagttgacacgattttagtacctaaa 15672770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 556
Target Start/End: Complemental strand, 19223107 - 19223054
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagttt 556  Q
    |||||||||| || | ||||||||||||||||||||| |||| ||| |||||||    
T  19223107 gtgttaactcggttacactcgtcaaactttccgatttcaccaaaaaccgagttt 19223054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 550 - 594
Target Start/End: Original strand, 24258534 - 24258578
Alignment:
Q  550 cgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    |||||||||||||||||| ||||||||||  |||||||| |||||    
T  24258534 cgagtttacctccgagtttacacgtttttgccacctaaaaacgta 24258578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 29716517 - 29716597
Alignment:
Q  146 aaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| ||||| ||||||||  |||| ||   |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  29716517 aaaaagcaagttacacaagttcctaaagtttttaataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 29716597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 36196027 - 36196119
Alignment:
Q  179 aataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa-tcttctaaagttccataacatcattctcatctatatcttcatct 270  Q
    ||||||||||||||||||| ||| ||| |||||||||| |||| ||||  |||||||| ||  ||||||| ||| ||||| || |||| ||||    
T  36196027 aataaaactatccaaaaaataaactagttaatttcttcaaaagttcaacccttctaaatttttataacattattatcatcgatgtcttaatct 36196119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 344; Significance: 0; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 16 - 399
Target Start/End: Complemental strand, 19484798 - 19484415
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19484798 atagacttacttatatatgcaaagtaaaccaaactaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 19484699  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19484698 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttctt 19484599  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactca 315  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  19484598 cgaaaggtcaatcttctaaagttccataacatcattctcatttatatcttcatcttcggaaacctaatgtttcattcactcccctgttcttgaaaactca 19484499  T
Q  316 aagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19484498 aagaaaatgatatgaaatgtttcacttcagtaagttgaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttg 19484415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 446 - 630
Target Start/End: Complemental strand, 19484369 - 19484176
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19484369 tacaggagtaaactcgtaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccag 19484270  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  19484269 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 19484176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 470 - 600
Target Start/End: Original strand, 8029811 - 8029941
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    |||||||||  ||| || |||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  8029811 gtaaactcggtcgagtttacacgattttaccgagtgttaactcggtcaaactcgtcaaaccttccgattttaccagaaatcgagtttatctcagagttaa 8029910  T
Q  570 cacgtttttagcacctaaacacgtagactcg 600  Q
    |||| |||| | ||||||||||||| |||||    
T  8029911 cacgattttggtacctaaacacgtaaactcg 8029941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 491 - 600
Target Start/End: Original strand, 10294982 - 10295091
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaaca 590  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||| || | | ||||||| |    
T  10294982 cgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgattgttgtacctaaaaa 10295081  T
Q  591 cgtagactcg 600  Q
    |||| |||||    
T  10295082 cgtaaactcg 10295091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 31625869 - 31625785
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||    
T  31625869 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacac 31625785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 505 - 632
Target Start/End: Original strand, 37131291 - 37131419
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccg 603  Q
    |||||||| |||||||||| |||||| ||| ||||||||||||| ||||||||||||||||||| ||||| |||| | ||||||| | ||| ||||| ||    
T  37131291 gttaactcgagtcaaactcttcaaacattctgattttaccagaagtcgagtttacctccgagttgacacgattttggtacctaaaaatgtaaactcgacg 37131390  T
Q  604 agttgacacgcgatttgtggaacattgcc 632  Q
    |||| |||| |||||||||||||||||||    
T  37131391 agttaacactcgatttgtggaacattgcc 37131419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 488 - 578
Target Start/End: Original strand, 14781772 - 14781862
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| ||||    
T  14781772 acacgagtttactgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttt 14781862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 488 - 578
Target Start/End: Complemental strand, 26856666 - 26856576
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||||| ||||||||||| ||||    
T  26856666 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttctgattttaccagaaaccgagtttacctcagagttaacacgatttt 26856576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 492 - 600
Target Start/End: Original strand, 9288138 - 9288246
Alignment:
Q  492 gagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacac 591  Q
    |||| |||||||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||| ||    
T  9288138 gagtatactgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaac 9288237  T
Q  592 gtagactcg 600  Q
    ||| |||||    
T  9288238 gtaaactcg 9288246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 44725431 - 44725531
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  44725431 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 44725530  T
Q  588 a 588  Q
    |    
T  44725531 a 44725531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 594
Target Start/End: Original strand, 18305616 - 18305722
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||| | |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  18305616 acacgagtttaccgagtgttaactcagtcaaactctttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 18305715  T
Q  588 acacgta 594  Q
    | |||||    
T  18305716 aaacgta 18305722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 43166316 - 43166428
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |||||||||||||   | |||||||| ||||||||||| |||| | ||||||    
T  43166316 acacgagtttaccgagtgttaactcagtcaaactcgtcaaacctttcaattttaccagaaacttattttacctcagagttaacacgatttttgtacctaa 43166415  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  43166416 aaacgtaaactcg 43166428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 488 - 631
Target Start/End: Original strand, 27878623 - 27878766
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||| |  ||||||||||||  ||||||||||||||| | |||||||||||||||| ||| ||||| |||||||||||||| |||| | ||||||    
T  27878623 acacgagttcatcgagtgttaactctatcaaactcgtcaaacctaccgattttaccagaaaccgaatttacatccgagttaacacgattttggtacctaa 27878722  T
Q  588 acacgtagactcgccgagttgacacgcgatttgtggaacattgc 631  Q
    ||||||| | |||  | ||| |||| ||||||| |||| |||||    
T  27878723 acacgtatattcggagtgttaacactcgatttgcggaatattgc 27878766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 488 - 631
Target Start/End: Original strand, 28018804 - 28018947
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||| |  ||||||||||||  ||||||||||||||| | |||||||||||||||| ||| ||||| |||||||||||||| |||| | ||||||    
T  28018804 acacgagttcatcgagtgttaactctatcaaactcgtcaaacctaccgattttaccagaaaccgaatttacatccgagttaacacgattttggtacctaa 28018903  T
Q  588 acacgtagactcgccgagttgacacgcgatttgtggaacattgc 631  Q
    ||||||| | |||  | ||| |||| ||||||| |||| |||||    
T  28018904 acacgtatattcggagtgttaacactcgatttgcggaatattgc 28018947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 19717514 - 19717614
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||| ||||||| |||||||||||||||||| ||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  19717514 acacaagtttaccgagtgttaactcagtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 19717613  T
Q  588 a 588  Q
    |    
T  19717614 a 19717614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 32498102 - 32497990
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||  |||||||||||| |||||  ||| |||| |||||||||||| ||||| |||||||||||| ||||||||||| |||| | ||||||    
T  32498102 acacgagtttacctagtgttaactcaatcaaatccgttaaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaa 32498003  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  32498002 aaacgtaaactcg 32497990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 567
Target Start/End: Complemental strand, 17234810 - 17234747
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtt 567  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17234810 gttaactcgagtcaaactcgtcaaacattccgattttaccagaaatcgagtttacctccgagtt 17234747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 631
Target Start/End: Complemental strand, 24067202 - 24067075
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccg 603  Q
    |||||||| |||| |||||||||||| | ||||||||||||||||| ||||| ||||||||||| ||||| |||| | ||||||| ||||| ||||| ||    
T  24067202 gttaactcgagtcgaactcgtcaaacatgccgattttaccagaaattgagttcacctccgagttgacacgattttggtacctaaaaacgtaaactcggcg 24067103  T
Q  604 agttgacacgcgatttgtggaacattgc 631  Q
    |||| |||| | |||| | |||||||||    
T  24067102 agttaacactcaatttttagaacattgc 24067075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 503 - 594
Target Start/End: Original strand, 28317075 - 28317166
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    |||||||||| ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||  ||| |||||  |||||||| |||||    
T  28317075 gtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaatcgagtttacctccgagttttcacctttttgccacctaaaaacgta 28317166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 488 - 594
Target Start/End: Complemental strand, 16364267 - 16364161
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||| | |||||||||||| |||| |||||||||||| ||||| ||| |||||||  ||||||||||| |||| | ||||||    
T  16364267 acacgagtttaccgagtgttaatttagtcaaactcgttaaaccttccgattttactagaaaccgaatttaccttagagttaacacgatttttgtacctaa 16364168  T
Q  588 acacgta 594  Q
    | |||||    
T  16364167 aaacgta 16364161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 488 - 594
Target Start/End: Original strand, 39467158 - 39467264
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||  |||| |||| ||||||||||||||| | |||||||  ||||||| ||| |||| | ||||||    
T  39467158 acacgagtttaccgagtgttaactcagtcaaactcgctaaaccttccaattttaccagaaatcaattttaccttagagttaatacgatttttgtacctaa 39467257  T
Q  588 acacgta 594  Q
    | |||||    
T  39467258 aaacgta 39467264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 488 - 578
Target Start/End: Original strand, 42305244 - 42305334
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||||| || ||||||||||||||| ||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| ||||    
T  42305244 acacgagtttaccgaatgttaactcagtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttt 42305334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 588
Target Start/End: Complemental strand, 41252261 - 41252176
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||| |||| || ||||||||||||||||||||||| | || ||||||||||||| |||||||||||||||||||  ||||||||    
T  41252261 gtgttgactcggttaaactcgtcaaactttccgatttcatcaaaaatcgagtttacttccgagttaacacgtttttgccacctaaa 41252176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 18958367 - 18958467
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||| || || |||| |||| ||||||||||||| | | |||||||| ||||||||||| |||| | ||||||    
T  18958367 acacgagtttaccgagtgttaactcagtcaatcttgttaaaccttccaattttaccagaaaccaattttacctcagagttaacacgatttttgtacctaa 18958466  T
Q  588 a 588  Q
    |    
T  18958467 a 18958467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 43308148 - 43308248
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||||||||||||| || |||| |||| ||||||||||||| ||| ||||  || ||||||||||| |||| | ||||||    
T  43308148 acacgagtttaccgagtgttaactcagtcaaacttgttaaaccttccaattttaccagaaaccgattttatatcagagttaacacgattttggtacctaa 43308247  T
Q  588 a 588  Q
    |    
T  43308248 a 43308248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 1527908 - 1527983
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    ||||||||| || |||||| ||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  1527908 gtgttaacttagccaaacttgtccaacattccgatttcaccaaaaatcgagtttacctccgagttaacacgttttt 1527983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 6388131 - 6388214
Alignment:
Q  505 gttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||||  |||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||| |||| | |||||||    
T  6388131 gttaacttggtcaaacttgtcaaactttccgattttaccataaacagagtttacctccgagttaacacgattttggtacctaaa 6388214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 33177485 - 33177596
Alignment:
Q  146 aaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaat-cttctaaagttccataa 244  Q
    ||||| |||||||||||||||| |||| |||  |||||| |||||||||||| ||| ||| |||||| ||| |||| ||||| ||||||||||| |||||    
T  33177485 aaaaaaaaagtttcacaagtttttaaagttgttaataaacctatccaaaaaataaactagttaattttttcaaaagttcaatccttctaaagtttcataa 33177584  T
Q  245 catcattctcat 256  Q
    ||||||| ||||    
T  33177585 catcattatcat 33177596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 488 - 594
Target Start/End: Original strand, 27915567 - 27915673
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||| |  |||||||||||| |||||||||||||||| | ||||||||| |||||||||| ||||  || ||||||||||| |||| | || |||    
T  27915567 acacgagttcatcgagtgttaactcggtcaaactcgtcaaacctaccgattttatcagaaatcgaatttaaatctgagttaacacgattttggtacataa 27915666  T
Q  588 acacgta 594  Q
    |||||||    
T  27915667 acacgta 27915673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 488 - 594
Target Start/End: Original strand, 27961986 - 27962092
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||| |  |||||||||||| |||||||||||||||| | ||||||||| |||||||||| ||||  || ||||||||||| |||| | || |||    
T  27961986 acacgagttcatcgagtgttaactcggtcaaactcgtcaaacctaccgattttatcagaaatcgaatttaaatctgagttaacacgattttggtacataa 27962085  T
Q  588 acacgta 594  Q
    |||||||    
T  27962086 acacgta 27962092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 12522528 - 12522596
Alignment:
Q  520 ctcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| |||| | |||||||    
T  12522528 ctcgtcaaaccttccgattttaccagaaaccgagtttacctctgagttaacacgattttggtacctaaa 12522596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 27878220 - 27878307
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||  |||| |||| |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  27878220 ccatccaaaaaagcaagtttcacaagttcctaaagttgataataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 27878307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 28018401 - 28018488
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||  |||| |||| |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  28018401 ccatccaaaaaagcaagtttcacaagttcctaaagttgataataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 28018488  T

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Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 578
Target Start/End: Complemental strand, 7466882 - 7466792
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||||  |||||||||||||||||||||||| || | |||| |||||| ||||||  || |||||||| ||||||||||| ||||    
T  7466882 acacgagtttatcgagtgttaactcagtcaaactcgttaagccttccaattttatcagaaactgattttacctcagagttaacacgatttt 7466792  T

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Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 588
Target Start/End: Original strand, 33177851 - 33177936
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||||||||||||||||||||||||| || | |||| |||| ||||||||||||||| | | ||||||| ||||| | |||||||    
T  33177851 gtgttaactcagtcaaactcgtcaaacatttcaatttcaccaaaaatcgagtttaccttcaaattaacacatttttggtacctaaa 33177936  T

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Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 488 - 555
Target Start/End: Original strand, 12522422 - 12522489
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtt 555  Q
    ||||||||||||  ||||||||||| |||||||||||||||| || | ||||||||||||| ||||||    
T  12522422 acacgagtttaccaagtgttaactcggtcaaactcgtcaaacctttcaattttaccagaaaccgagtt 12522489  T

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Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 27915164 - 27915251
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  27915164 ccatccaaaaaagcaagtttcacaagttcctaaaattgttaataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 27915251  T

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Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 27961583 - 27961670
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  27961583 ccatccaaaaaagcaagtttcacaagttcctaaaattgttaataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 27961670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 41394472 - 41394374
Alignment:
Q  34 gcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaa 132  Q
    ||||| |||||||||| ||||||| ||| || | || ||||||||| |||||| || |||||||||  ||||||| |||| ||||||||||||| ||||    
T  41394472 gcaaattataccaaactaccataataaaatgttgtgtttaacttagcatcaaattacaaaaattaatgcacaaaatcataagtttcataagtctataaa 41394374  T

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Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 8029377 - 8029442
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||| ||||||| ||||||||| ||| |||||| ||||||| |||| |||||||||||||||||    
T  8029377 tatgctcaacttagcatcaaaatacaaagattaacgcacaaaatcataagtttcataagtctctaa 8029442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 12737607 - 12737672
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||| ||||||| ||||||||| |||||||||| ||||||| ||||  ||||||||||||||||    
T  12737607 tatgctcaacttagcatcaaaatacaaaaattaacgcacaaaatcataaatttcataagtctctaa 12737672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 492 - 573
Target Start/End: Original strand, 26620338 - 26620419
Alignment:
Q  492 gagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacg 573  Q
    |||||||  ||||||||||||  |||||||||||||||||| |||||||| ||||||  || |||||| || ||||||||||    
T  26620338 gagtttatcgagtgttaactcgatcaaactcgtcaaacttttcgattttatcagaaactgaatttaccaccaagttaacacg 26620419  T

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Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 12521903 - 12521990
Alignment:
Q  40 tataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtct 127  Q
    |||||||||| ||||||| ||| |  |||||| ||||||| ||||||||| ||||| |||| ||| ||| |||| |||||||||||||    
T  12521903 tataccaaactaccataataaaatattatgctcaacttagcatcaaaatacaaaaactaacgcaccaaatcataagtttcataagtct 12521990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 44977333 - 44977242
Alignment:
Q  40 tataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||||||| || |||| ||| || |||| | || |||| ||||||||  |||||||||| ||||||| |||| |||||||||||||||||    
T  44977333 tataccaaactactataataaaatgttatgttcaatttagcatcaaaatttaaaaattaacgcacaaaatcataagtttcataagtctctaa 44977242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 585
Target Start/End: Original strand, 4871114 - 4871195
Alignment:
Q  504 tgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacct 585  Q
    ||||||||| || ||||||||||||| | |  ||||||  | |||||||||||||||| || ||||||||| ||||||||||    
T  4871114 tgttaactcggttaaactcgtcaaacatactaattttataaaaaatcgagtttacctctgaattaacacgtatttagcacct 4871195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 6387425 - 6387490
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||| ||||||| ||||||||| |||||||||| |||| ||  ||| |||||||||||||||||    
T  6387425 tatgctcaacttagcatcaaaatacaaaaattaacgcacataattataagtttcataagtctctaa 6387490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 557
Target Start/End: Complemental strand, 35879775 - 35879722
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagttta 557  Q
    |||||||| ||||||||||||||||| |||| |||||||| |||||||||||||    
T  35879775 gttaactcgagtcaaactcgtcaaacattccaattttaccggaaatcgagttta 35879722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 44977215 - 44977138
Alignment:
Q  146 aaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggt 223  Q
    |||||| ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| ||||||    
T  44977215 aaaaagcaagtttcacaagttcctaaagttgttaataaaactatctaaaaaataaactagttaatttcttcaaaaggt 44977138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 3007313 - 3007405
Alignment:
Q  35 caaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtct 127  Q
    |||| |||||||||| | ||||| |||  | |||||| ||||||| ||||||||| |||||||||  |||||||  ||| |||||||||||||    
T  3007313 caaattataccaaactatcataataaaacgttatgctcaacttagcatcaaaatacaaaaattaatgcacaaaattataagtttcataagtct 3007405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 524
Target Start/End: Complemental strand, 37857445 - 37857409
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgt 524  Q
    |||||||||||| ||||||||||||||||||||||||    
T  37857445 acacgagtttaccgagtgttaactcagtcaaactcgt 37857409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 42423689 - 42423609
Alignment:
Q  146 aaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| ||||||||||| ||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  42423689 aaaaaggaagtttcacaatttcctaaagttgttaataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 42423609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 8029466 - 8029537
Alignment:
Q  144 ccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    |||||||| ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||    
T  8029466 ccaaaaagcaagtttcacaagttcctaaaattgttaataaaactatctaaaaaataaactagttaatttctt 8029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 12737692 - 12737779
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||  |||| |||  ||||| ||||||  ||||| ||| ||| |||||||||| |||||||||    
T  12737692 ccatccaaaaaagcaagtttcacaagttcctaaagttgttaataatactatcttaaaaataaactagttaatttcttcaaaaggtcaa 12737779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 578
Target Start/End: Complemental strand, 41394065 - 41393978
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    ||||||||| |||||||||  |  ||||| | ||||||| || |||||||| ||||||  |||||||||||||| |||||||| ||||    
T  41394065 cgagtttaccgagtgttaatacgatcaaatttgtcaaacctttcgattttatcagaaactgagtttacctccgaattaacacgatttt 41393978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 42423808 - 42423717
Alignment:
Q  40 tataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||||||| ||||||| |||    |||| | ||||||  ||||||||| |||||||||| | ||||| |||| |||||||||||||||||    
T  42423808 tataccaaactaccataataaaacattatgttcaacttaacatcaaaatacaaaaattaacgcccaaaatcataagtttcataagtctctaa 42423717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 3007423 - 3007505
Alignment:
Q  144 ccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    ||||||| ||||||| ||||||| ||||| |||  |||||||||||  |||||| ||| ||| |||||||||| || ||||||    
T  3007423 ccaaaaaaaaagttttacaagttcataaagttgttaataaaactatataaaaaataaactagttaatttcttcaaatggtcaa 3007505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 6387510 - 6387559
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaacta 188  Q
    |||||| |||||| |||||||||||||||||||| |||  ||||||||||    
T  6387510 ccatccaaaaaagcaagtttcacaagtttataaagttgttaataaaacta 6387559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 12522021 - 12522101
Alignment:
Q  146 aaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| | ||||||||||||  |||| |||  | |||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  12522021 aaaaagcatgtttcacaagttcctaaagttgttattaaaactatcaaaaaaataaactagttaatttcttcaaaaggtcaa 12522101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 344; Significance: 0; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 16 - 399
Target Start/End: Complemental strand, 29469748 - 29469366
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29469748 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 29469649  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29469648 tttcataagtctctaaagtctacccatcccaaaaacaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttctt 29469549  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactca 315  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29469548 cgaaaggtcaatcttctaaagttccataacaccattctcatctatatcttcatcttcggaaacctaatgtttcattcgctcccctgttcttgaaaactca 29469449  T
Q  316 aagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  29469448 aagaaaatgatatgaaatgtttcacttcaataagctgaaacgtattgt-aagctagaaagtaaatatgttttcatttgggcttg 29469366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 16 - 399
Target Start/End: Complemental strand, 8084776 - 8084394
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8084776 atagacttacttataaatgcaaagtataccaaaccatcataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 8084677  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  8084676 tttcataagtctctaaagtctacccatcccaaaaataaagtttcacaagtttataaacttgagaataaaactatccagaaaacaaactaggtaatttctt 8084577  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactca 315  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8084576 cgaaaggtcaatcttctaaagttccataacaccattctcatctatatcttcatcttcggaaacctaatgtttcattcgctcccctgttcttgaaaactca 8084477  T
Q  316 aagaaaatgatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  8084476 aagaaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgt-aagctagaaagtaaatatgttgtcatttgggcttg 8084394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 42937097 - 42937297
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42937097 atagacttaattataaatgcaaagtataccaaactaccataaaaaaatg-tatgcttcacttagtatcaaaatagaaaaattaacacacaaaagcatagg 42937195  T
Q  116 tttcataagtctctaaagtcta-cccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttct 214  Q
    || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42937196 ttacataagtctctaaagtctagcccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaaacaaattaggtaatttct 42937295  T
Q  215 tc 216  Q
    ||    
T  42937296 tc 42937297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 446 - 600
Target Start/End: Complemental strand, 29469317 - 29469163
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29469317 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccag 29469218  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29469217 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcg 29469163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 446 - 630
Target Start/End: Original strand, 42937360 - 42937544
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||    
T  42937360 tacaggagtaaactcggaaaaacggtaaactcgcctaatttcacacgagtttacggagtgttaactcggtcaaactcgtcaaacttttcgattttaccag 42937459  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||| |||| |||||||||||| ||||||||| |||||||    
T  42937460 aaatcgagtttacctccgagttaaaacgcttttagcacctaaatacgtaaactcaccgagttgacactcgatttgtgaaacattg 42937544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 470 - 630
Target Start/End: Complemental strand, 8084339 - 8084170
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8084339 gtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttactagaaatcgagtttacctccgagttaa 8084240  T
Q  570 cacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||||||||||||||||||         ||| |||||||||||||||||||| ||||||||||||||    
T  8084239 cacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcggtttgtggaacattg 8084170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 488 - 630
Target Start/End: Complemental strand, 50517305 - 50517163
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||| |||| | ||||||    
T  50517305 acacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttccaattttaccagaaatcgagtttacctcaaagttaacacgattttggtacctaa 50517206  T
Q  588 acacgtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||| |||||  ||||| |||| ||||||| |||||||||    
T  50517205 acacgtaaactcggagagttaacactcgatttgcggaacattg 50517163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 23671080 - 23671178
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaa-aagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcata 113  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23671080 atagacttaattataaatgtaaagtataccaaaccactataaaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcata 23671178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 470 - 594
Target Start/End: Original strand, 23671347 - 23671471
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    ||||||| | || |||| ||||||||||||||||| ||||||   |||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  23671347 gtaaacttggccaattttacacgagtttactgagtcttaacttgctcaaactcgtcaaacttttcgatttcaccagaaatcgagtttacctccgagttaa 23671446  T
Q  570 cacgtttttagcacctaaacacgta 594  Q
    |||| |||| | |||||||||||||    
T  23671447 cacgattttggtacctaaacacgta 23671471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 41725671 - 41725568
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaaca 590  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||| |    
T  41725671 cgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaa 41725572  T
Q  591 cgta 594  Q
    ||||    
T  41725571 cgta 41725568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 29856077 - 29855965
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||| ||||||||||| |||| | || |||    
T  29856077 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaatcgagtttacctcagagttaacacgatttttgtacataa 29855978  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  29855977 aaacgtaaactcg 29855965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 49501173 - 49501285
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||| |||| | ||||||    
T  49501173 acacgagtttaccgagtgttaactccgtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaa 49501272  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  49501273 aaacgtaaactcg 49501285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 49507238 - 49507350
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||| |||| | ||||||    
T  49507238 acacgagtttaccgagtgttaactccgtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaa 49507337  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  49507338 aaacgtaaactcg 49507350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 523 - 629
Target Start/End: Complemental strand, 33138877 - 33138771
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccgagttgacacgcgatttgtg 622  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |||||  ||||| |||| ||||||| |    
T  33138877 gtcaaaccttccgattttaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaactcggagagttaacactcgatttgcg 33138778  T
Q  623 gaacatt 629  Q
    |||||||    
T  33138777 gaacatt 33138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 503 - 600
Target Start/End: Original strand, 6487324 - 6487421
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  6487324 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 6487421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 49834474 - 49834586
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||| |||| | | ||||    
T  49834474 acacgagtttaccgagtattaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtagctaa 49834573  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  49834574 aaacgtaaactcg 49834586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 492 - 631
Target Start/End: Complemental strand, 46286817 - 46286678
Alignment:
Q  492 gagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacac 591  Q
    |||||||  |||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||  | ||||||||| |||| | ||||||| ||    
T  46286817 gagtttatcgagtgttaactcggtcaaactcgtcaaaccttccgagtttactagaaatcgagtttaccttagtgttaacacgattttggtacctaaaaac 46286718  T
Q  592 gtagactcgccgagttgacacgcgatttgtggaacattgc 631  Q
    ||| |||||  ||||| |||| ||||||| ||||||||||    
T  46286717 gtaaactcggagagttaacactcgatttgcggaacattgc 46286678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 468 - 629
Target Start/End: Original strand, 24966490 - 24966651
Alignment:
Q  468 cggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtt 567  Q
    |||||||||||  ||| || ||||||||||||  ||||||||||  |||||||||| ||||| |||| ||||||||| ||| ||| ||||| ||||||||    
T  24966490 cggtaaactcggtcgagtttacacgagtttaccaagtgttaacttggtcaaactcggcaaaccttcccattttaccaaaaaccgaatttacttccgagtt 24966589  T
Q  568 aacacgtttttagcacctaaacacgtagactcgccgagttgacacgcgatttgtggaacatt 629  Q
    |||||| |||| | ||||||||||||| |||||  ||||| |||| ||||||| | ||||||    
T  24966590 aacacgattttggtacctaaacacgtaaactcggagagttaacactcgatttgcgaaacatt 24966651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 51967374 - 51967277
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| ||||||||||||||||||| |||||| |||| ||| |||||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  51967374 gtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 51967277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 5441963 - 5441863
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  5441963 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 5441864  T
Q  588 a 588  Q
    |    
T  5441863 a 5441863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 492 - 600
Target Start/End: Original strand, 29510061 - 29510169
Alignment:
Q  492 gagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacac 591  Q
    |||||||| |||||||||||| |||||||||||||||| ||| ||||||||||||||| |||||||| || ||||||||||| ||||   ||||||||||    
T  29510061 gagtttaccgagtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaattgagtttacatcagagttaacacgattttgatacctaaacac 29510160  T
Q  592 gtagactcg 600  Q
    ||| |||||    
T  29510161 gtaaactcg 29510169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 48261639 - 48261539
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  48261639 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 48261540  T
Q  588 a 588  Q
    |    
T  48261539 a 48261539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 578
Target Start/End: Original strand, 37828070 - 37828160
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| ||||    
T  37828070 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttt 37828160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 503 - 588
Target Start/End: Complemental strand, 9972870 - 9972785
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||  ||||||||    
T  9972870 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttgccacctaaa 9972785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 488 - 633
Target Start/End: Original strand, 26491114 - 26491259
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||  | ||||||||| |||||||||||||||| ||| |||||||||||||| ||||||||||||  | |||||||| |||| | ||||||    
T  26491114 acacgagtttaccaaatgttaactcggtcaaactcgtcaaaccttctgattttaccagaaaccgagtttacctcaaatttaacacgattttggtacctaa 26491213  T
Q  588 acacgtagactcgccgagttgacacgcgatttgtggaacattgcct 633  Q
    ||||||| ||||   ||||| |||| |||| |  ||||||||||||    
T  26491214 acacgtaaactcagagagttaacactcgatctacggaacattgcct 26491259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 488 - 573
Target Start/End: Complemental strand, 28484457 - 28484372
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacg 573  Q
    |||||||||||  |||||||||||||||||||||||| |||| |||| ||||||||||||| |||||||||||| |||||||||||    
T  28484457 acacgagtttatcgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaacacg 28484372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 32322628 - 32322515
Alignment:
Q  488 acacgagtttactgagtgttaa-ctcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcaccta 586  Q
    |||||||||||| ||||||||| ||||||||||||||| || | |||||||||||||||||| |||||||||||| || |||||||| |||| | |||||    
T  32322628 acacgagtttaccgagtgttaaactcagtcaaactcgttaagccttccgattttaccagaaaccgagtttacctcagaattaacacgatttttgtaccta 32322529  T
Q  587 aacacgtagactcg 600  Q
    || ||||| |||||    
T  32322528 aaaacgtaaactcg 32322515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 27768625 - 27768525
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| || ||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  27768625 acacgagtttaccgaatgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 27768526  T
Q  588 a 588  Q
    |    
T  27768525 a 27768525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 488 - 555
Target Start/End: Complemental strand, 37916350 - 37916283
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtt 555  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  37916350 acacgagtttactgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtt 37916283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 505 - 573
Target Start/End: Complemental strand, 871905 - 871836
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacg 573  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  871905 gttaactcgagtcaaactcgtcaaacattccgattttaccagaaatcgagtttacctccgagttgacacg 871836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 503 - 600
Target Start/End: Original strand, 8563364 - 8563461
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| |||||||||||||||||||||||||| | || ||| |||||||| ||||||||||||||||||||  || ||||| ||||| |||||    
T  8563364 gtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaaaccgagtttatctccgagttaacacgtttttgtcatctaaaaacgtaaactcg 8563461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 5800525 - 5800425
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||  |||||||||||||||||||||||| |||| ||| ||| |||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  5800525 acacgagtttatcgagtgttaactcagtcaaactcgttaaaccttctgatgttaccagaaaccgaatttacctcagagttaacacgatttttgtacctaa 5800426  T
Q  588 a 588  Q
    |    
T  5800425 a 5800425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 23987757 - 23987646
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||  ||||||||||||||||||||||| |||| |||| ||||||||||||| | | |||||||| ||||||||||| |||| | ||||||    
T  23987757 acacgagtttacctagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaa-ccaatttacctcagagttaacacgatttttgtacctaa 23987659  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  23987658 aaacgtaaactcg 23987646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 30966983 - 30967095
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||| |||||||||||| |||| |||| ||||||||||||| | | |||| ||| ||||||||||| |||| | ||||||    
T  30966983 acacgagtttaccgagtgttaacttagtcaaactcgttaaaccttccaattttaccagaaaccaattttatctcagagttaacacgatttttgtacctaa 30967082  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  30967083 aaacgtaaactcg 30967095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 51321417 - 51321317
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||||||||||||| || |||| |||| ||||||||||||| ||| ||||| || ||||||||||| |||| | ||||||    
T  51321417 acacgagtttaccgagtgttaactcagtcaaactggttaaaccttccaattttaccagaaaccgattttacgtcagagttaacacgatttttgtacctaa 51321318  T
Q  588 a 588  Q
    |    
T  51321317 a 51321317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 600
Target Start/End: Original strand, 56423982 - 56424078
Alignment:
Q  504 tgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||||||  ||||||||| |||||||||||||||| || | ||| |||||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  56423982 tgttaacttggtcaaactcatcaaactttccgatttcactaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 56424078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 588
Target Start/End: Complemental strand, 26448728 - 26448643
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||||  |||||||||||||||| ||| ||||||  ||||||||    
T  26448728 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaattaagtttacctccgagtttacatgtttttgccacctaaa 26448643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 40162886 - 40162789
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| |||||||||||||||||||||||||| |||  ||| |||||||| |||||| || ||||||||||  |||||||| ||||| |||||    
T  40162886 gtgttaactcggtcaaactcgtcaaactttccgatttcaccgaaaaccgagtttatctccgaatttacacgtttttgccacctaaaaacgtaaactcg 40162789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 588
Target Start/End: Complemental strand, 54561316 - 54561231
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||||||| ||||||| |||||||||||||||||| |||| ||| |||||||||||||||||| ||| ||||||  ||||||||    
T  54561316 gtgttaactcggtcaaacacgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacatgtttttgccacctaaa 54561231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 504 - 624
Target Start/End: Original strand, 23170738 - 23170859
Alignment:
Q  504 tgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagac-tcgcc 602  Q
    ||||||||| ||||||||||||||||||| |||||| |||| ||| |||  |||||||||| ||||||| |||||  |||||||| ||||| || | | |    
T  23170738 tgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgaaattacctccgaattaacacatttttgccacctaaaaacgtaaacttgggc 23170837  T
Q  603 gagttgacacgcgatttgtgga 624  Q
    ||||| |||| |||||||||||    
T  23170838 gagttaacactcgatttgtgga 23170859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 24965984 - 24966188
Alignment:
Q  35 caaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagt 134  Q
    |||| |||||||||| ||||||| |||  | |||||| ||||||  |||||||||  ||||||||| ||||||| |||| ||||||||||||||| ||||    
T  24965984 caaattataccaaactaccataataaaacgttatgctcaacttaacatcaaaataccaaaattaacgcacaaaatcataagtttcataagtctcttaagt 24966083  T
Q  135 ct-------------acccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaag 221  Q
     |             | |||||| |||||  ||||||||||||||  |||| |||  |||||||||||| |||||||||| ||| |||||||||| ||||    
T  24966084 ttaaatcatccataaaaccatccaaaaaaacaagtttcacaagttcctaaagttgttaataaaactatctaaaaaacaaactagttaatttcttcaaaag 24966183  T
Q  222 gtcaa 226  Q
    |||||    
T  24966184 gtcaa 24966188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 50018753 - 50018653
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||| ||||| ||| | |||| |||| ||||||||||||| ||| |||||||| ||||||||| | |||| | ||||||    
T  50018753 acacgagtttaccgagtgttaactctgtcaatctctttaaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacctaa 50018654  T
Q  588 a 588  Q
    |    
T  50018653 a 50018653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 496 - 588
Target Start/End: Complemental strand, 54341695 - 54341603
Alignment:
Q  496 ttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||| |||||||||||||||||||||||| |||| || | ||||||||||||| ||| |||||||| ||||| ||||| |||| | |||||||    
T  54341695 ttaccgagtgttaactcagtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagtttacacgatttttgtacctaaa 54341603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 600
Target Start/End: Complemental strand, 32889979 - 32889896
Alignment:
Q  517 aaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||  |||||||||| |||| | ||||||||||||| |||||    
T  32889979 aaactcgtcaaaccttctgattttaccagaaattgagtttacatcaaagttaacacgattttggtacctaaacacgtaaactcg 32889896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 594
Target Start/End: Original strand, 41470352 - 41470423
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    |||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||  |||||||| |||||    
T  41470352 gtcaaactttccaatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgta 41470423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 594
Target Start/End: Original strand, 32683668 - 32683774
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||||| |||||||||| |||| |||| |||||| |||||| |||  |||||||  | |||||||| |||| | ||||||    
T  32683668 acacgagtttaccgagtgttaactcattcaaactcgttaaaccttccaattttaacagaaaccgatcttacctcataattaacacgatttttgtacctaa 32683767  T
Q  588 acacgta 594  Q
    | |||||    
T  32683768 aaacgta 32683774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 572
Target Start/End: Original strand, 54853118 - 54853200
Alignment:
Q  490 acgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||| ||||||||||||| |||||||||| |||| |||  ||||||| ||||| ||| |||||||| ||||||||||    
T  54853118 acgagtttaccgagtgttaactcaatcaaactcgttaaaccttctaattttacgagaaaccgattttacctcagagttaacac 54853200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 25842632 - 25842724
Alignment:
Q  179 aataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaatcttct-aaagttccataacatcattctcatctatatcttcatct 270  Q
    |||||| |||||||||||| ||| ||| |||||||||| |||| ||||| || | ||||||||||||||||||| ||||| || |||||||||    
T  25842632 aataaagctatccaaaaaataaactagttaatttcttcaaaagatcaatgtttttaaagttccataacatcattatcatcgatgtcttcatct 25842724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 32890484 - 32890388
Alignment:
Q  35 caaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||| |||||||||| ||||||| |||    |||||| ||||||| ||||||||| |||||||||| | ||||| |||| |||||||||||||||||    
T  32890484 caaattataccaaactaccataataaaacattatgctcaacttagcatcaaaatacaaaaattaacgcccaaaatcataagtttcataagtctctaa 32890388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 46862422 - 46862534
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||| ||| ||| ||||| |||| ||||| ||||||| |||    ||| || ||||||| ||||||||| ||| |||||||||||||| |||| ||||    
T  46862422 gacttaattacaaaggcaaattatatcaaactaccataataaaacattatactcaacttagcatcaaaatacaaagattaacacacaaaatcataagttt 46862521  T
Q  119 cataagtctctaa 131  Q
    |||||||||||||    
T  46862522 cataagtctctaa 46862534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 505 - 599
Target Start/End: Complemental strand, 55165621 - 55165526
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactc 599  Q
    |||||||| ||||||||||||||||| ||| |||||||||| ||||| ||||||||||| |||||| ||| |||| | || |||| ||||| ||||    
T  55165621 gttaactcgagtcaaactcgtcaaacattctgattttaccataaatcaagtttacctccaagttaatacgattttggtacgtaaaaacgtaaactc 55165526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 600
Target Start/End: Complemental strand, 21486601 - 21486515
Alignment:
Q  514 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||||||||||||| |||||  ||| ||| ||||||||||| |||||| ||||| ||||  |||||||| ||||| |||||    
T  21486601 gtcaaactcgtcaaactttctgatttctccaaaaaccgagtttaccttcgagtttacacggttttgccacctaaaaacgtaaactcg 21486515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 33139393 - 33139307
Alignment:
Q  45 caaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    ||||| ||||||| |||  | |||||| ||| ||| ||||||||| |||||||||| ||||||| |||| |||||||||||||||||    
T  33139393 caaactaccataataaaacgttatgctcaacgtagcatcaaaatacaaaaattaacgcacaaaatcataagtttcataagtctctaa 33139307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 600
Target Start/End: Original strand, 46862941 - 46863018
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||||| || ||||||||||||||||||| ||||| ||  |||||||||  |||||| ||||||||||||| |||||    
T  46862941 gtcaaacctttcgattttaccagaaatcgaatttacttcatagttaacacaattttagtacctaaacacgtaaactcg 46863018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 35518049 - 35518108
Alignment:
Q  73 aacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaa 132  Q
    ||||||| ||||||||| |||||||| |||| |||| |||| ||||||||||||||||||    
T  35518049 aacttagcatcaaaatacaaaaattagcacataaaatcataagtttcataagtctctaaa 35518108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 40317281 - 40317400
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaatc-ttctaaagt 237  Q
    |||||| |||||  |||||||| |||||| |||| ||   |||||| |||| |||||||  || ||| |||||||||| |||| |||||| |||||||||    
T  40317281 ccatccgaaaaaccaagtttcagaagtttctaaagttattaataaatctattcaaaaaatgaactagttaatttcttcaaaagatcaatccttctaaagt 40317380  T
Q  238 tccataacatcattctcatc 257  Q
    |||| ||||||||| |||||    
T  40317381 tccacaacatcattatcatc 40317400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 40327355 - 40327474
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaatc-ttctaaagt 237  Q
    |||||| |||||  |||||||| |||||| |||| ||   |||||| |||| |||||||  || ||| |||||||||| |||| |||||| |||||||||    
T  40327355 ccatccgaaaaaccaagtttcagaagtttctaaagttattaataaatctattcaaaaaatgaactagttaatttcttcaaaagatcaatccttctaaagt 40327454  T
Q  238 tccataacatcattctcatc 257  Q
    |||| ||||||||| |||||    
T  40327455 tccacaacatcattatcatc 40327474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 14334936 - 14334826
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||||||| ||| ||||| |||| ||||| ||||| | |||  | |||||| |||| || ||||||||| |||||||||  || |||| |||| ||||    
T  14334936 gacttacttacaaaggcaaattatatcaaactaccattataaaacgttatgctcaactaagcatcaaaatacaaaaattaatgcaaaaaatcataagttt 14334837  T
Q  119 cataagtctct 129  Q
    |||||||||||    
T  14334836 cataagtctct 14334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 29649645 - 29649699
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttac 542  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||| |||||||    
T  29649645 acacgagtttaccgagtgttaactcagttaaactcgttaaaccttccaattttac 29649699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 541 - 599
Target Start/End: Original strand, 40487703 - 40487761
Alignment:
Q  541 accagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactc 599  Q
    |||| ||| |||||||||||||||||||||||||||||  |||||||| ||||| ||||    
T  40487703 accaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 40487761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 12754915 - 12754822
Alignment:
Q  34 gcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtct 127  Q
    ||||| |||||||||| ||||||| |||  | || ||| ||| ||  ||||||||| |||||||||| ||||||| |||| |||||||||||||    
T  12754915 gcaaattataccaaactaccataataaaacgttacgctcaacctaacatcaaaatacaaaaattaacgcacaaaatcataagtttcataagtct 12754822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 14334491 - 14334394
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| |||||||| |   |||||||||||||||||| ||| | ||||||| |||||||| || || |||| | ||||||| ||||| |||||    
T  14334491 gtgttaactcggtcaaactaggtcaactttccgattttaccaaaaaacaagtttacgtccgagtttacgcgattttggtacctaaaaacgtaaactcg 14334394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 557
Target Start/End: Complemental strand, 24453976 - 24453923
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagttta 557  Q
    |||||||| ||||||||||||||||| |||| |||||||| |||||||||||||    
T  24453976 gttaactcgagtcaaactcgtcaaacattccaattttaccggaaatcgagttta 24453923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 600
Target Start/End: Complemental strand, 25013522 - 25013446
Alignment:
Q  524 tcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||||||||| |  | |||| ||||||| ||||||||||||| ||||||  |||||||| ||||| |||||    
T  25013522 tcaaactttccgatttcattaaaaattgagtttagctccgagttaacatgtttttgccacctaaaaacgtaaactcg 25013446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 46862555 - 46862631
Alignment:
Q  140 catcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttc 216  Q
    ||||| |||||| ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| ||||||||||    
T  46862555 catccaaaaaagcaagtttcacaagttcttaaagttgttaataaaactatctaaaaaataaactagttaatttcttc 46862631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 600
Target Start/End: Original strand, 3860237 - 3860287
Alignment:
Q  550 cgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||| |||||    
T  3860237 cgagtttacctccgagttaacacgtttttgccacataaaaacgtaaactcg 3860287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 600
Target Start/End: Original strand, 3868994 - 3869044
Alignment:
Q  550 cgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||| |||||    
T  3868994 cgagtttacctccgagttaacacgtttttgccacataaaaacgtaaactcg 3869044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 558
Target Start/End: Original strand, 29966401 - 29966455
Alignment:
Q  504 tgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttac 558  Q
    ||||||||| |||||||||||| |||||| |||||| |||| ||| |||||||||    
T  29966401 tgttaactcggtcaaactcgtcgaacttttcgatttcaccaaaaaccgagtttac 29966455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 50517670 - 50517519
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagt 165  Q
    |||||| ||||||  ||||||||| |||||||||||||||||| |||| ||||| |||||   | |||     |||||| |||||| || ||||||||||    
T  50517670 tatgctcaacttaacatcaaaatacaaaaattaacacacaaaatcataagtttc-taagt---ttaag-----ccatccaaaaaagcaaatttcacaagt 50517580  T
Q  166 ttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |  |||| |||  |||||| | ||| |||||| ||| ||| |||||||||| |||||||||    
T  50517579 tcctaaagttgttaataaatccatctaaaaaataaactagttaatttcttcaaaaggtcaa 50517519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 544
Target Start/End: Complemental strand, 26955433 - 26955392
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttacca 544  Q
    |||||||||| |||||||||| |||||||| |||||||||||    
T  26955433 gtgttaactcggtcaaactcgacaaacttttcgattttacca 26955392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 872034 - 871954
Alignment:
Q  118 tcataagtctctaaagtct-acccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaa 197  Q
    |||||||| |||||||||| | |||||| |||| | || |||||||||||  |||| |||  |||||||||||||||||||    
T  872034 tcataagtttctaaagtcttaaccatccaaaaaggcaaatttcacaagttcctaaatttgttaataaaactatccaaaaaa 871954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 33139287 - 33139199
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatc-caaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| ||| || ||||||||||||||  |||| |||  ||||||||||||  |||||| ||| ||| |||||||||| |||||||||    
T  33139287 ccatccaaaatagcaagtttcacaagttcctaaagttgttaataaaactatctaaaaaaataaactagttaatttcttcaaaaggtcaa 33139199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 340; Significance: 0; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 24 - 399
Target Start/End: Original strand, 4639398 - 4639773
Alignment:
Q  24 acttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataa 123  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4639398 acttatatatgcaaagtaaaccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataa 4639497  T
Q  124 gtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4639498 gtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggt 4639597  T
Q  224 caatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactcaaagaaaat 323  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4639598 caatcttctaaagttccataacatcattctcatttatatcttcatcttaggaaacctaatgtttcattcactcccctgttcttgaaaactcaaagaaaat 4639697  T
Q  324 gatatgaaatgtttcacttcggtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4639698 gatatgaaatgtttcacttcagtaagttgaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttg 4639773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 16 - 370
Target Start/End: Complemental strand, 14742036 - 14741681
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14742036 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaaacatagg 14741937  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  14741936 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaaacaaactaggtaatttctt 14741837  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactca 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  14741836 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatcttcggaaacctaatgtttcattcgctcccctgttcttgaaaactta 14741737  T
Q  316 aagaaaatgatatgaaatgtttcacttcggtaagctgaaa-cgtgttgtaaagcta 370  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  14741736 aagaaaatgatatgaaatgtttcacttcagtaagctgaaaccgtgttgtaatgcta 14741681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 16 - 212
Target Start/End: Original strand, 37915573 - 37915770
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37915573 atagacttaattataaatgcaaagtataccaaactaccataaaaaaatggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataga 37915672  T
Q  116 tttcataagtctctaaagtct-acccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaattt 212  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37915673 tttcataagtctttaaagtctggcccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaaacaaattaggtaattt 37915770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 450 - 630
Target Start/End: Complemental strand, 14741576 - 14741387
Alignment:
Q  450 ggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaat 549  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  14741576 ggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttactagaaat 14741477  T
Q  550 cgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  14741476 cgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 14741387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 446 - 631
Target Start/End: Original strand, 4639820 - 4640014
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  4639820 tacaggagtaaactcgtaaaaacggtaaactcgcccgatttcacatgagtttactgagtgttaactcggtcaaactcgtcaaaatttccgattttaccag 4639919  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattgc 631  Q
    |||| |||||||||||||||||||||||||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||    
T  4639920 aaatagagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattgc 4640014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 446 - 630
Target Start/End: Original strand, 37915851 - 37916026
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||         ||||||||||     
T  37915851 tacaggagtaaactcacaaaaacggtaaactcgcccaatttcacacgagtttactgagtgttaactcggtcaaactgttc---------gattttaccat 37915941  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37915942 aaatcgagtttacctctgagttaaaacgcttttagcacctaaacacgtaaactcgccgagttgacacgcgatttgtggaacattg 37916026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 37328466 - 37328354
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||  ||||||||||| |||| | ||||||    
T  37328466 acacgagtttaccgagtgttaactcagtcaaacacgttaaaccttccgattttaccagaaatcgagtttaccttagagttaacacgatttttgtacctaa 37328367  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  37328366 aaacgtaaactcg 37328354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 493 - 600
Target Start/End: Original strand, 44256406 - 44256513
Alignment:
Q  493 agtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacg 592  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||| |||| | | ||||| |||    
T  44256406 agtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtatctaaaaacg 44256505  T
Q  593 tagactcg 600  Q
    || |||||    
T  44256506 taaactcg 44256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 510205 - 510105
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  510205 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 510106  T
Q  588 a 588  Q
    |    
T  510105 a 510105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 505 - 628
Target Start/End: Original strand, 11735194 - 11735318
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccg 603  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||  |||| ||||   |    
T  11735194 gttaactcgagtcaaactcggcaaacattccgattttaccagaaatcgagtttacctccgagttaacacgattttgggacctaaaatcgtaaactcagtg 11735293  T
Q  604 agttgacacgcgatttgtggaacat 628  Q
    |||| |||  |||||||||||||||    
T  11735294 agttaacattcgatttgtggaacat 11735318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 28342870 - 28342770
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  28342870 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 28342771  T
Q  588 a 588  Q
    |    
T  28342770 a 28342770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 29586073 - 29585961
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||| | |||| ||||||||||||| |||| ||| |||||||| ||||||||||| |||| | ||||||    
T  29586073 acacgagtttaccgagtgttaactcagtcaaactcattaaaccttccgattttacccgaaaccgactttacctcagagttaacacgatttttgtacctaa 29585974  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  29585973 aaacgtaaactcg 29585961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 40460360 - 40460460
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||| |||||||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  40460360 acacgagtatactgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 40460459  T
Q  588 a 588  Q
    |    
T  40460460 a 40460460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 578
Target Start/End: Complemental strand, 7993716 - 7993626
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||| ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||  |||||||||| ||||    
T  7993716 acaccagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcatagttaacacgatttt 7993626  T

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Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 558
Target Start/End: Complemental strand, 21067939 - 21067869
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttac 558  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  21067939 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaatcgagtttac 21067869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 503 - 588
Target Start/End: Complemental strand, 21024163 - 21024078
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||||||||||||  ||||||||    
T  21024163 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttaccttcgagttaacacgtttttgtcacctaaa 21024078  T

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Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 12740929 - 12740817
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||| ||||| ||||| ||||| ||||||||||||||||| |||| ||||||||||| | |||||||||||| ||||||||||| |||| | ||||||    
T  12740929 acacgactttaccgagtgctaacttagtcaaactcgtcaaaccttccaattttaccagacaccgagtttacctcagagttaacacgattttggtacctaa 12740830  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  12740829 aaacgtaaactcg 12740817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 29614441 - 29614541
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| || | ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  29614441 acacgagtttaccgagtgttaactcagtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 29614540  T
Q  588 a 588  Q
    |    
T  29614541 a 29614541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 39784666 - 39784566
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  39784666 acacgagtttaccgagtgttaactctgtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 39784567  T
Q  588 a 588  Q
    |    
T  39784566 a 39784566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 48136874 - 48136986
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||| ||||  ||||||||||||||||||||||||||||| |||  |||||||||||||  ||||||||||| ||||||||||| |||| | ||||||    
T  48136874 acacgaatttatcgagtgttaactcagtcaaactcgtcaaaccttctaattttaccagaaactgagtttacctcagagttaacacgattttggtacctaa 48136973  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  48136974 aaacgtaaactcg 48136986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 503 - 594
Target Start/End: Original strand, 14732298 - 14732389
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    ||||| |||| |||||||||||||||||||||||||| |||| ||| | |||||||||||||||||||||||||||  |||||||| |||||    
T  14732298 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccaagtttacctccgagttaacacgtttttgccacctaaaaacgta 14732389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 488 - 599
Target Start/End: Complemental strand, 41827887 - 41827776
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||||||||||||| || |||  ||| ||||||||||||||  ||||||||||| ||||||||||| |||| | ||||||    
T  41827887 acacgagtttaccgagtgttaactcagtcaaacttgttaaatcttctgattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaa 41827788  T
Q  588 acacgtagactc 599  Q
    | ||||| ||||    
T  41827787 aaacgtaaactc 41827776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 488 - 593
Target Start/End: Complemental strand, 8675891 - 8675785
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccga-ttttaccagaaatcgagtttacctccgagttaacacgtttttagcaccta 586  Q
    |||||||||||  ||||||||||||||||||||||||||||| || ||| |||||||||||| |||||||||||  ||||||||||| |||| | |||||    
T  8675891 acacgagtttatcgagtgttaactcagtcaaactcgtcaaacctttcgatttttaccagaaaccgagtttaccttagagttaacacgattttggtaccta 8675792  T
Q  587 aacacgt 593  Q
    || ||||    
T  8675791 aaaacgt 8675785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 488 - 578
Target Start/End: Complemental strand, 29893531 - 29893441
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||||| |||||||||||||||||||||||| |||| || |||||| ||||||||  ||||||||||| ||||||||||| ||||    
T  29893531 acacgagtttaccgagtgttaactcagtcaaactcgttaaacctttcgatttcaccagaaactgagtttacctcagagttaacacgatttt 29893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 488 - 594
Target Start/End: Original strand, 33891880 - 33891986
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||| |||||||||||||||||||| |||| |||| |||| ||||||||||||| ||| |||||||  ||||||||||| |||| | ||||||    
T  33891880 acacgagtttattgagtgttaactcagtcaaattcgttaaaccttccaattttaccagaaaccgattttaccttagagttaacacgatttttgtacctaa 33891979  T
Q  588 acacgta 594  Q
    | |||||    
T  33891980 aaacgta 33891986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 488 - 594
Target Start/End: Complemental strand, 42610729 - 42610623
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||  ||||||||||| |||||||||||||||| ||| |||||||||||||| | ||||||||||  | |||||||| |||| | ||||||    
T  42610729 acacgagtttacccagtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaaccaagtttacctcaaatttaacacgattttggtacctaa 42610630  T
Q  588 acacgta 594  Q
    |||||||    
T  42610629 acacgta 42610623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 488 - 594
Target Start/End: Original strand, 44121579 - 44121685
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||  ||||||||||||||||||||||| || | |||||||||||||||||| ||| ||||||||  |||||||||| |||| | ||||||    
T  44121579 acacgagtttaccaagtgttaactcagtcaaactcgttaagccttccgattttaccagaaaccgaatttacctcatagttaacacgatttttgtacctaa 44121678  T
Q  588 acacgta 594  Q
    | |||||    
T  44121679 aaacgta 44121685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 491 - 572
Target Start/End: Complemental strand, 23017101 - 23017020
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    ||||||||| |||||||||||| |||||||||||||||  |||| ||||||| ||||||||||||||||||| |||||||||    
T  23017101 cgagtttaccgagtgttaactcggtcaaactcgtcaaatcttccaattttacgagaaatcgagtttacctccaagttaacac 23017020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 488 - 573
Target Start/End: Complemental strand, 30823197 - 30823112
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacg 573  Q
    |||||||||||| ||||||||||||| ||||||||||  ||| |||||||||||| ||||| |||||||||||| |||||||||||    
T  30823197 acacgagtttaccgagtgttaactcaatcaaactcgttgaaccttccgattttactagaaaccgagtttacctcagagttaacacg 30823112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 18838969 - 18838869
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| || |||||||| |||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  18838969 acacgagtttaccgaatgttaacttagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 18838870  T
Q  588 a 588  Q
    |    
T  18838869 a 18838869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 23101850 - 23101750
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| |||||||||||||  || |||||||  ||||||||||| |||| | ||||||    
T  23101850 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaactgattttaccttagagttaacacgatttttgtacctaa 23101751  T
Q  588 a 588  Q
    |    
T  23101750 a 23101750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 37972523 - 37972635
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||  |||| ||||||||||||| |||| |||| ||||||||||||||||||  ||||||| ||| ||||||||||| |||| | ||||||    
T  37972523 acacgagtttaccaagtgctaactcagtcaaattcgttaaaccttccgattttaccagaaactgagtttatctcagagttaacacgattttggtacctaa 37972622  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  37972623 aaacgtaaactcg 37972635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 39028646 - 39028534
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||| ||| ||||||||| ||| |||||||| ||||| ||||  |||| | ||||||    
T  39028646 acacgagtttactgagtgttaactcagtcaaactcgttaaatcttccaattgtaccagaaaccgattttacctcagagtttacacaatttttgtacctaa 39028547  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  39028546 aaacgtaaactcg 39028534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 47067269 - 47067185
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||||| |||||||||||||||||||||||| |||| || | ||||||||||||||||| |||| ||| ||||||||||    
T  47067269 acacgagtttaccgagtgttaactcagtcaaactcgttaaacctttcaattttaccagaaatcgattttatctcagagttaacac 47067185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 19 - 226
Target Start/End: Complemental strand, 23017607 - 23017388
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||| ||| ||| ||| | |||||||||| ||||||| |||  | |||||| ||||||| ||||||||| |||||||||  ||||||| |||| ||||    
T  23017607 gacttaattacaaaagcagattataccaaactaccataataaaacgttatgctcaacttagcatcaaaatacaaaaattaatgcacaaaatcataagttt 23017508  T
Q  119 cataagtctcta-----aagtc-------tacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattagg 206  Q
    ||||||||||||     |||||        | |||||| |||||| ||||||||||||||| |||| |||  |||||||||||| |||||| ||| |||     
T  23017507 cataagtctctaagtttaagtcattcataaaaccatccaaaaaagcaagtttcacaagtttctaaagttgttaataaaactatctaaaaaataaactagt 23017408  T
Q  207 taatttcttcgaaaggtcaa 226  Q
    |||||| ||| |||||||||    
T  23017407 taattttttcaaaaggtcaa 23017388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 34656702 - 34656605
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| ||||||||||||||||||| |||||| |||| ||| ||| ||||| ||||| || ||||||||||| |||||||| ||||| |||||    
T  34656702 gtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgaatttacttccgaatttacacgtttttaccacctaaaaacgtaaactcg 34656605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 35313654 - 35313557
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| ||||||||| |||||||||||||||| |||| ||| ||| |||||||||||||||||||| ||||  || ||||| ||||| |||||    
T  35313654 gtgttaactcggtcaaactcatcaaactttccgatttcaccaaaaaccgaatttacctccgagttaacacggttttgccatctaaaaacgtaaactcg 35313557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 3023493 - 3023393
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| |||||| |||||| ||| ||||||||  |||||||| | |||| | ||||||    
T  3023493 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcaaagttaacatgatttttgtacctaa 3023394  T
Q  588 a 588  Q
    |    
T  3023393 a 3023393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 492 - 600
Target Start/End: Original strand, 28034498 - 28034606
Alignment:
Q  492 gagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacac 591  Q
    ||||||||  ||||||||||||||||||||||| |||| |||| ||||||||||||| ||| ||||| || ||||||||||| |||| | || |||| ||    
T  28034498 gagtttaccaagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacatcagagttaacacgatttttgtacataaaaac 28034597  T
Q  592 gtagactcg 600  Q
    ||| |||||    
T  28034598 gtaaactcg 28034606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 503 - 577
Target Start/End: Complemental strand, 19594307 - 19594233
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttt 577  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||| |||||||| |||| |||| |||||||||    
T  19594307 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttatctcctagtttacacgtttt 19594233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 505 - 578
Target Start/End: Original strand, 33497097 - 33497171
Alignment:
Q  505 gttaactca-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    ||||||||| |||||||||||||||| |||| |||||| ||||||||||||||||||||||||| ||||| ||||    
T  33497097 gttaactcaagtcaaactcgtcaaacattccaattttatcagaaatcgagtttacctccgagttgacacgatttt 33497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 21486739 - 21486648
Alignment:
Q  40 tataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||||||| ||||||| |||  | ||| || ||||||| ||||||||| |||||||||| ||||||| |||| |||||||||||||||||    
T  21486739 tataccaaactaccataataaaacgttatactcaacttagcatcaaaatacaaaaattaacgcacaaaatcataagtttcataagtctctaa 21486648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 158 - 267
Target Start/End: Original strand, 1254147 - 1254257
Alignment:
Q  158 tcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaat-cttctaaagttccataacatcattctcat 256  Q
    |||||| ||| |||| |||  |||||| |||||||||||| ||||||| || ||||||| |||| ||||| ||||||||||| |||||||||||| ||||    
T  1254147 tcacaaatttctaaagttgttaataaacctatccaaaaaataaattagttagtttcttcaaaagttcaatccttctaaagtttcataacatcattatcat 1254246  T
Q  257 ctatatcttca 267  Q
    | || ||||||    
T  1254247 cgatgtcttca 1254257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 578
Target Start/End: Complemental strand, 21486254 - 21486164
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||||| ||||||||||||  |||||||| |||||| |||  ||||||||| || |||||||||||| | |||||||||| ||||    
T  21486254 acacgagtttaccgagtgttaactcgatcaaactcatcaaaccttctaattttaccaaaattcgagtttaccttcaagttaacacgatttt 21486164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 588
Target Start/End: Complemental strand, 6268598 - 6268513
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||||||| |||||||||||||||| |||  |||| |||| ||| | ||||||| |||||||||||||||||||  ||||||||    
T  6268598 gtgttaactcggtcaaactcgtcaaacattctaatttcaccaaaaacctagtttacatccgagttaacacgtttttgacacctaaa 6268513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 26201794 - 26201878
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||||| ||||||||||||||||| ||||||||||| ||  ||| ||||||||||||||||| ||||| |||| | |||||||    
T  26201794 gttaactcgagtcaaactcgtcaaacattccgattttagcaataattgagtttacctccgagtttacacgattttggtacctaaa 26201878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 575
Target Start/End: Complemental strand, 38910578 - 38910506
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtt 575  Q
    |||||||||| ||||| |||||||||||||||||||| |||| ||| |||| |||||| |||||| |||||||    
T  38910578 gtgttaactcggtcaatctcgtcaaactttccgatttcaccaaaaaccgagcttaccttcgagtttacacgtt 38910506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 43172557 - 43172470
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  43172557 ccatccaaaaaagcaagtttcacaagttcgtaaagttgttaataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 43172470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 14741680 - 14741627
Alignment:
Q  345 gtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||||||||||||    
T  14741680 gtaagcttaaacgtgttgtaaagctagaaagtaaatatg-tttcatttgggcttg 14741627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 600
Target Start/End: Complemental strand, 16709534 - 16709435
Alignment:
Q  499 ctgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagact 598  Q
    |||||||||||||| |||||||| ||||||| |||||| ||||||  |||  ||||||||||| |||||| |||| |||| | ||||||| ||||| |||    
T  16709534 ctgagtgttaactcggtcaaacttgtcaaaccttccgagtttacc--aaactgagtttacctcagagttaccacgattttggtacctaaaaacgtaaact 16709437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 600
Target Start/End: Complemental strand, 17683770 - 17683671
Alignment:
Q  499 ctgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagact 598  Q
    |||||||||||||| |||||||| ||||||| |||||| ||||||  |||  ||||||||||| |||||| |||| |||| | ||||||| ||||| |||    
T  17683770 ctgagtgttaactcggtcaaacttgtcaaaccttccgagtttacc--aaactgagtttacctcagagttaccacgattttggtacctaaaaacgtaaact 17683673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 600
Target Start/End: Complemental strand, 32884295 - 32884218
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||||| ||||||||||||||||||  ||||||||||| |||||||| || |||| | ||||||| ||||| |||||    
T  32884295 gtcaaaccttccgattttaccagaaacagagtttacctcagagttaactcgatttttgtacctaaaaacgtaaactcg 32884218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 534 - 571
Target Start/End: Complemental strand, 43172220 - 43172183
Alignment:
Q  534 cgattttaccagaaatcgagtttacctccgagttaaca 571  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43172220 cgattttaccagaaatcgagtttacctccgagttaaca 43172183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 600
Target Start/End: Complemental strand, 27148941 - 27148845
Alignment:
Q  505 gttaactca-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||||||| |||||||||||||||| ||| ||||||| | ||||| ||| |||||||||| |||||||| ||||   ||||||| ||||| |||||    
T  27148941 gttaactcaagtcaaactcgtcaaacattctgattttagctgaaattgaggttacctccgatttaacacgattttgatacctaaaaacgtaaactcg 27148845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 6268924 - 6268825
Alignment:
Q  153 aagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaat-cttctaaagttccataacatcatt 251  Q
    ||||||||||||||| |||| |||  |||||| |||| ||| ||||||| ||| |||||| ||| |||| ||||| ||| ||||||| ||||||||||||    
T  6268924 aagtttcacaagtttctaaagttgttaataaacctattcaagaaacaaactagttaattttttcaaaagttcaatccttttaaagtttcataacatcatt 6268825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 569
Target Start/End: Original strand, 1254471 - 1254537
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    |||||||||| ||||||||| ||||||  |||||||| |||| ||||||||||||||| ||| ||||    
T  1254471 gtgttaactcggtcaaactcatcaaacagtccgatttcaccaaaaatcgagtttaccttcgatttaa 1254537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 16710029 - 16709942
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||  |||| |||  ||||| |||||| |||||| |||  || |||||||||| |||||||||    
T  16710029 ccatccaaaaaagcaagtttcacaagttcctaaagttgttaataagactatctaaaaaataaacaagttaatttcttcaaaaggtcaa 16709942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 17684265 - 17684178
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||  |||| |||  ||||| |||||| |||||| |||  || |||||||||| |||||||||    
T  17684265 ccatccaaaaaagcaagtttcacaagttcctaaagttgttaataagactatctaaaaaataaacaagttaatttcttcaaaaggtcaa 17684178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 588
Target Start/End: Complemental strand, 31174806 - 31174721
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||||||||| ||||||||||||||| ||| ||||| | || ||| | | ||||||||||| |||||| | ||||  ||||||||    
T  31174806 gtgttaactcactcaaactcgtcaaacattctgatttgaacaaaaaactattttacctccgatttaacatgattttgacacctaaa 31174721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 36415080 - 36415145
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||| |||||||||| || | |||||||||||| |||||||||||||  ||||| |||| ||||    
T  36415080 gtcaaattttccgatttcactaaaaatcgagtttatctccgagttaacaattttttggcacttaaa 36415145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 488 - 520
Target Start/End: Complemental strand, 32884321 - 32884289
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaac 520  Q
    |||||||||||| ||||||||||||||||||||    
T  32884321 acacgagtttaccgagtgttaactcagtcaaac 32884289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 320; Significance: 1e-180; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 16 - 370
Target Start/End: Original strand, 18899419 - 18899774
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18899419 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaatcatagg 18899518  T
Q  116 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttctt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  18899519 tttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaaacaaactaggtaatttctt 18899618  T
Q  216 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatctttggaaacctaatgtttcattcgctcccctgttcttgaaaactca 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  18899619 cgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatcttcggaaacctaatgtttcattcgctcccctgttcttgaaaactta 18899718  T
Q  316 aagaaaatgatatgaaatgtttcacttcggtaagctgaaa-cgtgttgtaaagcta 370  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  18899719 aagaaaatgatatgaaatgtttcacttcagtaagctgaaaccgtgttgtaatgcta 18899774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 450 - 634
Target Start/End: Original strand, 18899879 - 18900072
Alignment:
Q  450 ggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaat 549  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  18899879 ggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttactagaaat 18899978  T
Q  550 cgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattgcctt 634  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||||||    
T  18899979 cgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattgcctt 18900072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 15224621 - 15224524
Alignment:
Q  16 atagacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcata 113  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15224621 atagacttatttataaatgcaaagtataccaaaccactataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcata 15224524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 503 - 627
Target Start/End: Complemental strand, 3991870 - 3991745
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg-c 601  Q
    |||||||||| ||||||||||||||||||| |||||| |||| ||| |||||||||||||||||||||||||||||  |||||||| ||||| |||||      
T  3991870 gtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcgaa 3991771  T
Q  602 cgagttgacacgcgatttgtggaaca 627  Q
    |||||| |||| |||||||| |||||    
T  3991770 cgagttaacactcgatttgtagaaca 3991745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 497 - 594
Target Start/End: Complemental strand, 15224333 - 15224236
Alignment:
Q  497 tactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    ||||||||||||| || ||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||| | |||||||||||||    
T  15224333 tactgagtgttaattcggtcaaactcgtcaaacttttcgatttcaccagaaatcgagtttacctctgagttaacacgattttggtacctaaacacgta 15224236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 599
Target Start/End: Complemental strand, 13898573 - 13898477
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactc 599  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  | |||||| ||||| ||||    
T  13898573 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaactc 13898477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 599
Target Start/End: Complemental strand, 14039190 - 14039094
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactc 599  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  | |||||| ||||| ||||    
T  14039190 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaactc 14039094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 505 - 629
Target Start/End: Complemental strand, 15926474 - 15926349
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccg 603  Q
    |||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||||| ||||| |||| | ||| ||| ||||| ||||| ||    
T  15926474 gttaactcgagtcaaactcgtcaaacattgcgattttaccagaaatcgagttaacctccgagttgacacgattttggtaccaaaaaacgtaaactcgacg 15926375  T
Q  604 agttgacacgcgatttgtggaacatt 629  Q
    |||| |||  ||||||||||||||||    
T  15926374 agttaacattcgatttgtggaacatt 15926349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 33262950 - 33262853
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||| ||||||||||  |||||||| ||||| |||||    
T  33262950 gtgttaactcagtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttaccttcgagtttacacgtttttgccacctaaaaacgtaaactcg 33262853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 503 - 600
Target Start/End: Original strand, 38413458 - 38413555
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||  |||||||| ||||| |||||    
T  38413458 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttgccacctaaaaacgtaaactcg 38413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 18177832 - 18177732
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  18177832 acacgagtttaccgagtgttaactctgtcaaactcgttaaactttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 18177733  T
Q  588 a 588  Q
    |    
T  18177732 a 18177732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 28739935 - 28740035
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  28739935 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 28740034  T
Q  588 a 588  Q
    |    
T  28740035 a 28740035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 491 - 630
Target Start/End: Original strand, 35404311 - 35404450
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaaca 590  Q
    ||||||||  |||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||  |||||||||| |||  | ||||||| |    
T  35404311 cgagtttatcgagtgttaactcggtcaaactcgtcaaactttccaattttaccaaaaaccgagtttacctctaagttaacacgatttcggtacctaaaaa 35404410  T
Q  591 cgtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||| |||||  ||||| |||| ||||||| | |||||||    
T  35404411 cgtaaactcgaagagttaacactcgatttgcgtaacattg 35404450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 600
Target Start/End: Complemental strand, 40829766 - 40829636
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    |||||||||  ||| || ||| ||||||| ||||||||||||| |||||| ||||||||| || | ||||||||||||| ||||||||||||||||||||    
T  40829766 gtaaactcggtcgagtttacatgagtttattgagtgttaactcggtcaaattcgtcaaacctttctattttaccagaaaccgagtttacctccgagttaa 40829667  T
Q  570 cacgtttttagcacctaaacacgtagactcg 600  Q
    |||| ||||   ||||||| | |||||||||    
T  40829666 cacgattttgatacctaaaaatgtagactcg 40829636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 503 - 588
Target Start/End: Complemental strand, 19948635 - 19948550
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||  ||||||||||||||||||||||||||||  ||||||||    
T  19948635 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaactgagtttacctccgagttaacacgtttttgccacctaaa 19948550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 491 - 599
Target Start/End: Complemental strand, 3575399 - 3575291
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaaca 590  Q
    ||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||| | |||| | ||||||| |    
T  3575399 cgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacctaaaaa 3575300  T
Q  591 cgtagactc 599  Q
    |||| ||||    
T  3575299 cgtaaactc 3575291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 7027464 - 7027364
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| || | ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  7027464 acacgagtttaccgagtgttaactcagtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 7027365  T
Q  588 a 588  Q
    |    
T  7027364 a 7027364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 600
Target Start/End: Complemental strand, 10657991 - 10657879
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||  ||||||||||||||| |||||||| |||| |||| ||||||||| ||||||| |||||||| ||||||||||| |||| | ||||||    
T  10657991 acacgagtttatcgagtgttaactcagttaaactcgttaaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaa 10657892  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  10657891 aaacgtaaactcg 10657879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 13833060 - 13833172
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||||||||||||| || |||  ||| |||||||| |||||| ||||||||||| ||||||||||| |||| | ||||||    
T  13833060 acacgagtttaccgagtgttaactcagtcaaacttgttaaatcttctgattttactagaaattgagtttacctcagagttaacacgatttttgtacctaa 13833159  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  13833160 aaacgtaaactcg 13833172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 28845146 - 28845046
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| |||||| |||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  28845146 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaa 28845047  T
Q  588 a 588  Q
    |    
T  28845046 a 28845046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 33136177 - 33136077
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||| ||||||| ||||||||||| ||||||| |||| |||| |||||||| |||||||||||||||||||||| ||||||||||| |||| | ||||||    
T  33136177 acacaagtttaccgagtgttaacttagtcaaattcgttaaaccttccgattataccagaaatcgagtttacctcagagttaacacgatttttgtacctaa 33136078  T
Q  588 a 588  Q
    |    
T  33136077 a 33136077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 43825401 - 43825317
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||    
T  43825401 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacac 43825317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 503 - 594
Target Start/End: Original strand, 11153354 - 11153445
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    |||||||||| |||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| |||||    
T  11153354 gtgttaactcggtcaaactcgccaaacatctcgattttaccagaaaccgagtttacctccgagttaacacgatttcagcacctaaaaacgta 11153445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 488 - 578
Target Start/End: Original strand, 18727636 - 18727726
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||||||  || ||||||||| || ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| ||||    
T  18727636 acacgagtttatcgaatgttaactcggtgaaactcgtcaaactttttgattttaccagaattcgagtttacctccgagttaacacggtttt 18727726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 32294382 - 32294233
Alignment:
Q  104 caaaagcataggtttcataagtctctaaagtct-acccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaat 202  Q
    ||||| |||| |||||||||| |||| |||||| | |||||| |||||| ||||||||||||||  |||| |||  ||||||||||||||||||| |||     
T  32294382 caaaatcataagtttcataagactcttaagtcttaaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaactatccaaaaaataaac 32294283  T
Q  203 taggtaatttcttcgaaaggtcaat-cttctaaagttccataacatcatt 251  Q
    ||| |||||||||| |||| ||||| ||| |||||||  |||||||||||    
T  32294282 tagttaatttcttcaaaagatcaatccttttaaagttttataacatcatt 32294233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 2308395 - 2308487
Alignment:
Q  179 aataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaat-cttctaaagttccataacatcattctcatctatatcttcatct 270  Q
    ||||||| ||||||||||| ||| ||  |||||||||| |||||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  2308395 aataaaattatccaaaaaataaactaaataatttcttcaaaaggtcaatgcttctaaagttccataacatcattttcatctatgtcttcatct 2308487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 492 - 600
Target Start/End: Original strand, 6224222 - 6224330
Alignment:
Q  492 gagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacac 591  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||| ||||| |||||| ||||  ||||||||||| |||  | ||||||| ||    
T  6224222 gagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttactagaaaccgagttcacctaagagttaacacgatttgtgtacctaaaaac 6224321  T
Q  592 gtagactcg 600  Q
    ||| |||||    
T  6224322 gtaaactcg 6224330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 25288724 - 25288624
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||  ||||||||||||| |||||| ||| |||| |||||||||||| ||||| |||||||||||| ||||||||||| |||| | ||||||    
T  25288724 acacgagtttatcgagtgttaactcaatcaaacccgttaaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaa 25288625  T
Q  588 a 588  Q
    |    
T  25288624 a 25288624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 26789346 - 26789246
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||   ||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  26789346 acacgagtttatcaagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 26789247  T
Q  588 a 588  Q
    |    
T  26789246 a 26789246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 503 - 594
Target Start/End: Complemental strand, 41978934 - 41978843
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    |||||||||| |||||||||||||||||||||||||| | || ||| ||||||||||||||| |||||| ||||||  |||||||| |||||    
T  41978934 gtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaaaccgagtttacctccgaattaacatgtttttgccacctaaaaacgta 41978843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 492 - 594
Target Start/End: Complemental strand, 379487 - 379385
Alignment:
Q  492 gagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacac 591  Q
    |||||||| |||||||||||||||||||||||| || | ||||||||||| || ||| ||| |||||||| ||||||||||| |||| | ||||||| ||    
T  379487 gagtttaccgagtgttaactcagtcaaactcgttaagccttccgattttatcaaaaaccgaatttacctcagagttaacacgatttttgtacctaaaaac 379388  T
Q  592 gta 594  Q
    |||    
T  379387 gta 379385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 488 - 594
Target Start/End: Original strand, 31847207 - 31847313
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||| || ||| |||||||||||| ||| ||||||| ||||||| |||||||||||||||||| || | |||||  ||||||    
T  31847207 acacgagtttaccgagtgttaattcggtcgaactcgtcaaaccttctgattttatcagaaatagagtttacctccgagttaccatgattttaatacctaa 31847306  T
Q  588 acacgta 594  Q
    | |||||    
T  31847307 aaacgta 31847313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 505 - 630
Target Start/End: Complemental strand, 32294008 - 32293883
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccg 603  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||| || || |||||||| |||| | ||| ||| ||||| ||||  ||    
T  32294008 gttaactcgagtcaaactcgtcaaacattccgattttacaagaaatccagtttacatcagatttaacacgattttggtacc-aaaaacgtaaactcagcg 32293910  T
Q  604 agttgacacgcgatttgtggaacattg 630  Q
    |||| |||| |||||||||||||||||    
T  32293909 agttaacactcgatttgtggaacattg 32293883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 38295228 - 38295409
Alignment:
Q  35 caaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagt 134  Q
    |||| |||||||||| ||||||| |||    |||||| ||||||  |||  |||| |||||||||| ||||||| |||| ||||||||||||| |||  |    
T  38295228 caaattataccaaactaccataataaaacattatgctcaacttaacatcgtaatacaaaaattaacgcacaaaatcataagtttcataagtctttaagtt 38295327  T
Q  135 ctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttc 216  Q
      | |||||| |||||||||||||||||| ||  |||| |||  |||||||||||| |||||| ||| ||| ||||||||||    
T  38295328 taagccatccaaaaaagaaagtttcacaaattcctaaagttgctaataaaactatctaaaaaataaactagttaatttcttc 38295409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 38295707 - 38295791
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||||| |||||||||||| |||||||||||||||| ||| |||||||||||||| | | ||| ||||||| |||||||    
T  38295707 acacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaaccaaattttcctccgaattaacac 38295791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 43079051 - 43078967
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||||  ||||||||||||| |||||||||| |||| ||| ||||||| |||||| |||||||||||| ||||||||||    
T  43079051 acacgagtttatcgagtgttaactcaatcaaactcgttaaaccttcggattttaacagaaaccgagtttacctcagagttaacac 43078967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 588
Target Start/End: Complemental strand, 24025963 - 24025860
Alignment:
Q  485 ttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacc 584  Q
    ||||||||||||||    |||||||||||||| || ||||||||| ||| |||||||||| ||| |||||||| |||| |||||||||||||||  ||||    
T  24025963 ttcacacgagtttaacacgtgttaactcagtccaattcgtcaaacattctgattttaccaaaaaccgagtttatctccaagttaacacgtttttgacacc 24025864  T
Q  585 taaa 588  Q
    ||||    
T  24025863 taaa 24025860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 488 - 578
Target Start/End: Original strand, 2308703 - 2308793
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||| ||||| |||||||||||  |||||||| ||||||||||  |||||||||| ||| ||| |||||||||||||||||||| ||||    
T  2308703 acacgattttaccgagtgttaacttggtcaaacttgtcaaactttttgattttaccacaaaccgaatttacctccgagttaacacgatttt 2308793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 600
Target Start/End: Complemental strand, 12877763 - 12877686
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||||||||||||||| | || ||| |||||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  12877763 gtcaaactttccgatttcatcaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 12877686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 503 - 572
Target Start/End: Original strand, 45161137 - 45161206
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||| ||| |||||||||||||||||||||| |||| ||| |||||||||||||||||| ||||    
T  45161137 gtgttaactcggtcgaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacac 45161206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 31846644 - 31846755
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||| ||||||| | ||| |||||||||| |||||||  ||  | |||||| |||||||||| |||||| |||||| ||| ||||||| |||| ||||    
T  31846644 gacttaattataaaggtaaactataccaaactaccataatgaaacgttatgctcaacttagtattaaaatacaaaaatgaacgcacaaaatcataagttt 31846743  T
Q  119 cataagtctcta 130  Q
    ||||||||||||    
T  31846744 cataagtctcta 31846755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 631
Target Start/End: Original strand, 1833720 - 1833838
Alignment:
Q  513 agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccgagttgacac 612  Q
    |||||||||||  |||| |||  ||||||||||||||||| ||||||||| | || ||||| ||||   ||||||| ||||| ||||| |||||| ||||    
T  1833720 agtcaaactcgataaacattcttattttaccagaaatcgaatttacctccaaattgacacgattttgttacctaaaaacgtaaactcgacgagttaacac 1833819  T
Q  613 gcgatttgtggaacattgc 631  Q
     || |||||||||||||||    
T  1833820 tcggtttgtggaacattgc 1833838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 560
Target Start/End: Complemental strand, 34342347 - 34342278
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 560  Q
    ||||||||| || |||||||||| || |||||||||||| |||||| ||||||||||| |||||||||||    
T  34342347 cgagtttaccgactgttaactcaatctaactcgtcaaaccttccgagtttaccagaaaccgagtttacct 34342278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 572
Target Start/End: Original strand, 43304976 - 43305044
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    ||||||||||||||||| |||||||||||||| |||| || || |||||||||||||| |||||||||||    
T  43304976 gtgttaactcagtcaaagtcgtcaaactttcctatttcactagtaatcgagtttacct-cgagttaacac 43305044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 2308052 - 2308143
Alignment:
Q  40 tataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||||||| ||||||| |||  | ||||||  |||||| |||||| || |||||||||| ||||||| |||| |||||||||||||||||    
T  2308052 tataccaaactaccataataaaacgttatgctacacttagcatcaaattacaaaaattaactcacaaaatcataagtttcataagtctctaa 2308143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 37810459 - 37810591
Alignment:
Q  92 aaaattaacacacaaaagcataggtttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatcc 191  Q
    |||||||||  |||||| |||| |||||||||| |||||||      |||||| ||| || |||||||||| ||| ||||| |||  |||||| ||||||    
T  37810459 aaaattaacttacaaaatcataagtttcataagactctaaa------ccatccgaaagagtaagtttcacatgttgataaagttgttaataaacctatcc 37810552  T
Q  192 aaaaaacaaattaggtaatttcttcgaaaggtcaatctt 230  Q
    |||||| ||| ||| |||||||||| |||| ||||||||    
T  37810553 aaaaaataaactagttaatttcttcaaaagttcaatctt 37810591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 555
Target Start/End: Original strand, 43318766 - 43318817
Alignment:
Q  504 tgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtt 555  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  43318766 tgttaactcggtcaaactcgtcaaactttccgattttaccaaaaatagagtt 43318817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 18899775 - 18899828
Alignment:
Q  345 gtaagctgaaacgtgttgtaaagctataaagtaaatatgttttcatttgggcttg 399  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||||||||||||    
T  18899775 gtaagcttaaacgtgttgtaaagctagaaagtaaatatg-tttcatttgggcttg 18899828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 578
Target Start/End: Original strand, 32242211 - 32242285
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    |||||||| |||||||||||| |||| ||| |||||||| ||||||| |||||||||| ||||||||||| ||||    
T  32242211 gttaactcgagtcaaactcgttaaacattctgattttacaagaaatcaagtttacctcagagttaacacgatttt 32242285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 34342813 - 34342755
Alignment:
Q  73 aacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    ||||||| ||||||||| |||||||||||||||||| ||||  ||||||||||||||||    
T  34342813 aacttagcatcaaaatacaaaaattaacacacaaaatcataaatttcataagtctctaa 34342755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 30850933 - 30850868
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||| ||||||| ||||||||| |||||||||||||||||| |||| ||||| ||| |||||||    
T  30850933 tatgctcaacttagcatcaaaatacaaaaattaacacacaaaatcataagtttcgtaaatctctaa 30850868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 488 - 540
Target Start/End: Complemental strand, 3464163 - 3464111
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgatttt 540  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||| |||||    
T  3464163 acacgagtttactgagtgttaactcagtcaaactcattaaaccttccaatttt 3464111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 560
Target Start/End: Original strand, 3858427 - 3858483
Alignment:
Q  505 gttaactc-agtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 560  Q
    |||||||| ||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  3858427 gttaactcgagttaaactcgtcaaacattccgattttaccaaaaatcgagtttacct 3858483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 24026246 - 24026154
Alignment:
Q  179 aataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaat-cttctaaagttccataacatcattctcatctatatcttcatct 270  Q
    ||||||||||||||||||| ||| ||| |||||||||| |||| ||| | |||||||| || |||||||||||| |||||  | |||||||||    
T  24026246 aataaaactatccaaaaaataaactagttaatttcttcaaaagttcagtccttctaaaatttcataacatcattatcatcggtctcttcatct 24026154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 594
Target Start/End: Original strand, 37810898 - 37810978
Alignment:
Q  514 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    ||||||||| |||||| ||  ||||| |||| ||||| ||||||||||||| ||||||||||||| ||| ||||| |||||    
T  37810898 gtcaaactcatcaaacattatgatttcaccaaaaatcaagtttacctccgatttaacacgtttttggcatctaaaaacgta 37810978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 42242422 - 42242310
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||| ||| |||| |||| ||||| |||| ||||||| |||    |||||| ||||||  ||||||||| ||||| |||| ||||||| |||| ||||    
T  42242422 gacttaattagaaatacaaattatactaaactaccataataaaaccttatgctcaacttatcatcaaaatacaaaaaataacgcacaaaatcataagttt 42242323  T
Q  119 cataagtctctaa 131  Q
    |||||||||||||    
T  42242322 cataagtctctaa 42242310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 37654874 - 37654949
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaa 94  Q
    |||||| |||||||||||||||||||||||||||||| | ||| |  |||||| ||||||  ||||||||| ||||    
T  37654874 gacttaattataaatgcaaagtataccaaaccaccattataaaatattatgctcaacttaacatcaaaatacaaaa 37654949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 594
Target Start/End: Complemental strand, 30850364 - 30850274
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    |||||||||| |||||||  ||||| ||||  |||||||||| ||| ||| |||||||||||||| | ||| |||| ||||||||| |||||    
T  30850364 gtgttaactcggtcaaaccggtcaa-ctttatgattttaccaaaaaacgaatttacctccgagtttatacgattttggcacctaaaaacgta 30850274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 18727251 - 18727336
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtc 224  Q
    |||||| |||||| ||| ||||||||||  |||| |||  ||||||||||| |||||||  || ||| |||||||||| |||||||    
T  18727251 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttcttcaaaaggtc 18727336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 34342721 - 34342648
Alignment:
Q  153 aagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||||||||||||  ||| |||  |||||||||||| |||||| ||| ||| |||||||||  |||||||||    
T  34342721 aagtttcacaagttttcaaagttgttaataaaactatctaaaaaataaactagttaatttcttgaaaaggtcaa 34342648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 31846783 - 31846863
Alignment:
Q  146 aaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| ||||||  ||||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  31846783 aaaaagcaagttttgcaagttcctaaagttgttaataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 31846863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 9e-75; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 446 - 630
Target Start/End: Original strand, 1463616 - 1463810
Alignment:
Q  446 tacaggagtaaactcgcaaaa-acggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttacca 544  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1463616 tacaggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttacca 1463715  T
Q  545 gaaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  1463716 gaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 1463810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 446 - 630
Target Start/End: Complemental strand, 6788255 - 6788061
Alignment:
Q  446 tacaggagtaaactcgcaaaaa-cggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttacca 544  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6788255 tacaggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttacca 6788156  T
Q  545 gaaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  6788155 gaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 6788061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 446 - 631
Target Start/End: Original strand, 10113726 - 10113920
Alignment:
Q  446 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccag 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||     
T  10113726 tacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtctaaactcggtcaaactcgtcaaactttccgattttaccaa 10113825  T
Q  546 aaatcgagtttacctccgagttaacacgtttttagcacctaaacac---------gtagactcgccgagttgacacgcgatttgtggaacattgc 631  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||||         ||| ||||||||||||||||||||||||||||||||||||    
T  10113826 aaaacgagtttacctccgagttaacacgtttttaggacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattgc 10113920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 470 - 594
Target Start/End: Complemental strand, 3000370 - 3000246
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    ||||||||  ||||||| ||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||| ||||||| |||||| |||||||||    
T  3000370 gtaaactcagccgattttacacgagtttattgagtgttaactcgatcaaactcgtcaaacttcccgattttaccataaatcgaatttacccccgagttaa 3000271  T
Q  570 cacgtttttagcacctaaacacgta 594  Q
    |||| |||| | |||||||||||||    
T  3000270 cacgattttggtacctaaacacgta 3000246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 503 - 600
Target Start/End: Original strand, 31996251 - 31996348
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  31996251 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 31996348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 491 - 591
Target Start/End: Original strand, 31975643 - 31975743
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaaca 590  Q
    ||||||||| |||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||| |||| | |||||||||    
T  31975643 cgagtttaccgagtcttaactcggtcaaactcgtcaaaccttccgattttacaagaaatcgagtttacctcagagttaacacgattttggtacctaaaca 31975742  T
Q  591 c 591  Q
    |    
T  31975743 c 31975743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 471 - 600
Target Start/End: Complemental strand, 16438835 - 16438706
Alignment:
Q  471 taaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaac 570  Q
    ||||||||  ||| || |||||||||||| ||||| ||||||  | ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  16438835 taaactcgatcgagtttacacgagtttaccgagtgctaactcgattaaactcgtcaaaccttccgattttaccagaagtcgagtttacctccaagttaac 16438736  T
Q  571 acgtttttagcacctaaacacgtagactcg 600  Q
    ||| |||| | ||||||| ||||| |||||    
T  16438735 acgatttttgtacctaaaaacgtaaactcg 16438706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 31896197 - 31896097
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | ||||||    
T  31896197 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaa 31896098  T
Q  588 a 588  Q
    |    
T  31896097 a 31896097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 492 - 599
Target Start/End: Complemental strand, 2607003 - 2606896
Alignment:
Q  492 gagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacac 591  Q
    ||||||| ||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||| ||| |||| |  |||||||||    
T  2607003 gagtttattgagtgttaactcggtcaaactcatcaaaccttctgattttaccagaaatcgagtttacctcagagttaaaacgattttggtgcctaaacac 2606904  T
Q  592 gtagactc 599  Q
    ||| ||||    
T  2606903 gtaaactc 2606896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 505 - 600
Target Start/End: Original strand, 8779586 - 8779681
Alignment:
Q  505 gttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||  |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  8779586 gttaacttggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 8779681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 10110786 - 10110859
Alignment:
Q  197 acaaattaggtaatttcttcgaaaggtcaatcttctaaagttccataacatcattctcatctatatcttcatct 270  Q
    ||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10110786 acaaactagataatttcttcaagaggtcaatcttctaaagttccataacatcattctcatctatatcttcatct 10110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 491 - 588
Target Start/End: Complemental strand, 31067989 - 31067892
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| ||||||||||| |||| | |||||||    
T  31067989 cgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaa 31067892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 491 - 631
Target Start/End: Complemental strand, 13461481 - 13461342
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaaca 590  Q
    |||||||||||||| || ||  ||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||| ||||| ||||   || |||| |    
T  13461481 cgagtttactgagt-ttgaccgagtcaaactcgtcaaacattctgattttaccaaaaaccgagtttacctccgagttgacacgattttgatacataaaaa 13461383  T
Q  591 cgtagactcgccgagttgacacgcgatttgtggaacattgc 631  Q
    |||| ||||  |||||| |||| ||||||||||||||||||    
T  13461382 cgtaaactcagcgagttaacactcgatttgtggaacattgc 13461342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 501 - 588
Target Start/End: Original strand, 14262090 - 14262177
Alignment:
Q  501 gagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||||| |||| | |||||||    
T  14262090 gagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaa 14262177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 504 - 594
Target Start/End: Complemental strand, 21199650 - 21199560
Alignment:
Q  504 tgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    ||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||  ||||||||||| ||||  |||||||| |||||    
T  21199650 tgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttaccttggagttaacacggttttgccacctaaaaacgta 21199560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 501 - 594
Target Start/End: Complemental strand, 7497645 - 7497552
Alignment:
Q  501 gagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgta 594  Q
    ||||||||||||| |||||||||| |||| |||| ||||||||||||| |||||||||||| ||||||||||| |||| | ||||||| |||||    
T  7497645 gagtgttaactcaatcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgta 7497552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 491 - 571
Target Start/End: Original strand, 4200095 - 4200175
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaaca 571  Q
    ||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||||||||    
T  4200095 cgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 4200175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 525 - 619
Target Start/End: Original strand, 28900863 - 28900957
Alignment:
Q  525 caaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccgagttgacacgcgattt 619  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||| ||| |||||  ||||| |||| ||||||    
T  28900863 caaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaacatgtaaactcggagagttaacactcgattt 28900957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 30384705 - 30384805
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| |||||| ||||||  || |||||||  ||||||||||| |||| | ||||||    
T  30384705 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttatcagaaactgattttaccttagagttaacacgatttttgtacctaa 30384804  T
Q  588 a 588  Q
    |    
T  30384805 a 30384805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 494 - 594
Target Start/End: Original strand, 34758726 - 34758826
Alignment:
Q  494 gtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgt 593  Q
    |||||| ||||||||||||||||||||| || |||| |||| |||||| |||||| ||| |||||||| ||||||||||| |||| | ||||||| ||||    
T  34758726 gtttaccgagtgttaactcagtcaaacttgttaaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgt 34758825  T
Q  594 a 594  Q
    |    
T  34758826 a 34758826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 34773945 - 34773873
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 560  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||| ||| |||||||    
T  34773945 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacct 34773873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 600
Target Start/End: Original strand, 7835387 - 7835464
Alignment:
Q  523 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    ||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||||  |||||||| ||||| |||||    
T  7835387 gtcaaactttccgatttcaccaaaaaccgagtttacctccgacttaacacgtttttgccacctaaaaacgtaaactcg 7835464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 508 - 572
Target Start/End: Original strand, 31535068 - 31535132
Alignment:
Q  508 aactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||| |||| ||||||||||    
T  31535068 aactcggtcaaactcgtcaaacctttcgattttaccagaaatcgagtttgcctcagagttaacac 31535132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 31975231 - 31975343
Alignment:
Q  19 gacttacttataaatgcaaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggttt 118  Q
    |||||| ||| ||| ||||| |||| ||||| ||||||| |||    |||||| ||||||| ||||||||| |||||||||| ||||||| |||| ||||    
T  31975231 gacttaattacaaaggcaaattatatcaaactaccataataaaacattatgctcaacttagcatcaaaatacaaaaattaacgcacaaaatcataagttt 31975330  T
Q  119 cataagtctctaa 131  Q
    |||||||||||||    
T  31975331 cataagtctctaa 31975343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 16439192 - 16439105
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||| ||||||||||||||| |||| |||  |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  16439192 ccatccaaaaaagcaagtttcacaagtttctaaagttgttaataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 16439105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 2607484 - 2607419
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||| ||||||| ||||||||| |||||||||| ||||||| |||| |||||||||||||||||    
T  2607484 tatgctcaacttagcatcaaaatacaaaaattaacgcacaaaatcataagtttcataagtctctaa 2607419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 470 - 578
Target Start/End: Complemental strand, 12029105 - 12028997
Alignment:
Q  470 gtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaa 569  Q
    |||||||||  ||| || ||||||||||| |  |||||||||  |||||||||||||||| || |||||| |  | ||||||||||||||||  ||||||    
T  12029105 gtaaactcggtcgagtttacacgagtttaatacgtgttaactatgtcaaactcgtcaaacatttcgatttcaataaaaatcgagtttacctcaaagttaa 12029006  T
Q  570 cacgttttt 578  Q
    |||||||||    
T  12029005 cacgttttt 12028997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 544
Target Start/End: Complemental strand, 24194546 - 24194469
Alignment:
Q  468 cggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaa-actcgtcaaactttccgattttacca 544  Q
    |||||||||||   || || |||||||||||| |||||||||||| ||||| |||||||||||||||| |||||||||    
T  24194546 cggtaaactcgattgaatttacacgagtttaccgagtgttaactcggtcaatactcgtcaaactttccaattttacca 24194469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 28900440 - 28900523
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaagg 222  Q
    |||||| |||||| ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| |||||    
T  28900440 ccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaactatctaaaaaataaactagttaatttcttcaaaagg 28900523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 596 - 630
Target Start/End: Original strand, 1452084 - 1452118
Alignment:
Q  596 actcgccgagttgacacgcgatttgtggaacattg 630  Q
    |||||||||||||||||||||||||||||||||||    
T  1452084 actcgccgagttgacacgcgatttgtggaacattg 1452118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 24194963 - 24194877
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtca 225  Q
    |||||| |||||||||||||||||| ||  |||| |||  | |||||||||| |||||| ||| ||| |||||||||| ||||||||    
T  24194963 ccatccaaaaaagaaagtttcacaaattcctaaagttgttattaaaactatctaaaaaataaactagttaatttcttcaaaaggtca 24194877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 21010528 - 21010656
Alignment:
Q  144 ccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaat-cttctaaagttccat 242  Q
    |||||||  ||||||||||||||| |||| |||  ||| || ||||| |||  | ||| ||| |||||||||| |||| ||||| ||| ||||||| |||    
T  21010528 ccaaaaaataagtttcacaagtttctaaagttgttaattaacctatcaaaattataaactagttaatttcttcaaaagttcaatccttataaagtttcat 21010627  T
Q  243 aacatcattctcatctatatcttcatctt 271  Q
    ||||||||| |||||  | ||||||||||    
T  21010628 aacatcattatcatcggtgtcttcatctt 21010656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 33640889 - 33640969
Alignment:
Q  146 aaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| ||||||||||| ||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| |||||||||    
T  33640889 aaaaaggaagtttcacaatttcctaaagttgttaataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaa 33640969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 506 - 588
Target Start/End: Original strand, 21010883 - 21010965
Alignment:
Q  506 ttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaa 588  Q
    ||||||| || ||||||||||||| ||  ||||| |||| ||| |||||| |||| ||| ||||||||| |||| ||||||||    
T  21010883 ttaactcggttaaactcgtcaaacattttgatttcaccaaaaaccgagttgaccttcgaattaacacgtatttaacacctaaa 21010965  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 15381130 - 15381195
Alignment:
Q  66 tatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaa 131  Q
    |||||| |||| || ||||||||| |||||||||  ||||||| |||| ||||| |||||||||||    
T  15381130 tatgctcaactcagcatcaaaatacaaaaattaatgcacaaaatcataagtttcttaagtctctaa 15381195  T

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Target: scaffold1128 (Bit Score: 81; Significance: 9e-38; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 893 - 1005
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| | ||||||    
T  893 acacgagtttactaagtgttaactcggtcaaactcatcaaactttccgattttaccagaaaccgagtttacctccgagttaacacgattttggtacctaa 992  T
Q  588 acacgtagactcg 600  Q
    ||||||| |||||    
T  993 acacgtaaactcg 1005  T

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Target: scaffold0543 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 11085 - 10985
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||| ||||||| |||||||| ||||||||||| |||| | ||||||    
T  11085 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaa 10986  T
Q  588 a 588  Q
    |    
T  10985 a 10985  T

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Target: scaffold0421 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 503 - 572
Target Start/End: Complemental strand, 1796 - 1727
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  1796 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacac 1727  T

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Target: scaffold0042 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 57705 - 57817
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||| ||||||||||||| |||||||| | |||| ||| |||||||| ||||| |||||||||||| ||||||||||| |||| | ||||||    
T  57705 acacgagtttaccgagtgttaactcaatcaaactcattaaaccttctgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaa 57804  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  57805 aaacgtaaactcg 57817  T

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Target: scaffold0263 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 446 - 520
Target Start/End: Original strand, 414 - 489
Alignment:
Q  446 tacaggagtaaactcgcaaaa-acggtaaactcgcccgatttcacacgagtttactgagtgttaactcagtcaaac 520  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  414 tacaggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttagtgagtgttaactcggtcaaac 489  T

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Target: scaffold0263; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 596 - 631
Target Start/End: Original strand, 505 - 540
Alignment:
Q  596 actcgccgagttgacacgcgatttgtggaacattgc 631  Q
    ||||||||||||||||||||||||||||||||||||    
T  505 actcgccgagttgacacgcgatttgtggaacattgc 540  T

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Target: scaffold0383 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 491 - 572
Target Start/End: Original strand, 16673 - 16754
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||  ||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||||| ||||||||||    
T  16673 cgagtttaccaagtgttaactcagtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaacac 16754  T

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Target: scaffold0152 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 491 - 572
Target Start/End: Original strand, 20909 - 20990
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||  ||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||||| ||||||||||    
T  20909 cgagtttaccaagtgttaactcagtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaacac 20990  T

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Target: scaffold0152; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 491 - 572
Target Start/End: Complemental strand, 28892 - 28811
Alignment:
Q  491 cgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacac 572  Q
    |||||||||  ||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||||| ||||||||||    
T  28892 cgagtttaccaagtgttaactcagtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaacac 28811  T

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Target: scaffold0110 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 600
Target Start/End: Original strand, 39276 - 39388
Alignment:
Q  488 acacgagtttactgagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaa 587  Q
    |||||||||||   |||| ||||||||||||||||||||||| || ||||||||||||||| |||||| ||||| | ||||||||| |||| | ||||||    
T  39276 acacgagtttatcaagtgctaactcagtcaaactcgtcaaacctttcgattttaccagaaaccgagttgacctcagggttaacacgattttggtacctaa 39375  T
Q  588 acacgtagactcg 600  Q
    | ||||| |||||    
T  39376 aaacgtaaactcg 39388  T

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Target: scaffold1504 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 501 - 600
Target Start/End: Complemental strand, 1414 - 1315
Alignment:
Q  501 gagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||||||||||||||||| |||| |||| ||||||| ||||| ||| |||||||| ||||||||||| |||| | ||||||| ||||| |||||    
T  1414 gagtgttaactcagtcaaactcgttaaaccttccaattttacaagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcg 1315  T

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Target: scaffold0573 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 525 - 619
Target Start/End: Complemental strand, 8931 - 8837
Alignment:
Q  525 caaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcgccgagttgacacgcgattt 619  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||| ||| |||||  ||||| |||| ||||||    
T  8931 caaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaacatgtaaactcggagagttaacactcgattt 8837  T

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Target: scaffold0573; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 9354 - 9271
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaattaggtaatttcttcgaaagg 222  Q
    |||||| |||||| ||||||||||||||  |||| |||  |||||||||||| |||||| ||| ||| |||||||||| |||||    
T  9354 ccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaactatctaaaaaataaactagttaatttcttcaaaagg 9271  T

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Target: scaffold0246 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 1464 - 1367
Alignment:
Q  503 gtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||| || ||||||||||||||||||||||| || | ||| ||||||||||||| |||||||| ||||||  |||||||| ||||| |||||    
T  1464 gtgttaactcggttaaactcgtcaaactttccgatttcactaaaaaccgagtttacctccaagttaacatgtttttgccacctaaaaacgtaaactcg 1367  T

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Target: scaffold0246; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 541 - 599
Target Start/End: Original strand, 25642 - 25700
Alignment:
Q  541 accagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtagactc 599  Q
    |||| ||| |||||||||||||||||||||||||||||  |||||||| ||||| ||||    
T  25642 accaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 25700  T

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Target: scaffold0013 (Bit Score: 49; Significance: 1e-18; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 573
Target Start/End: Complemental strand, 89379 - 89307
Alignment:
Q  501 gagtgttaactcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacg 573  Q
    ||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||| | ||||||||||    
T  89379 gagtgttaactcgatcaaactcgtcaaaccttccaattttaccagaaatcgagtttaccttcaagttaacacg 89307  T

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Target: scaffold0013; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 89892 - 89795
Alignment:
Q  35 caaagtataccaaaccaccataaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaa 132  Q
    |||| ||||| |||| ||||||| ||| |  |||||  ||||||| ||||||||| |||||||||  ||||||| |||| ||||||||||||||||||    
T  89892 caaattatacgaaactaccataataaaatattatgcgcaacttagcatcaaaatacaaaaattaatgcacaaaatcataagtttcataagtctctaaa 89795  T

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Target: scaffold0013; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 89776 - 89688
Alignment:
Q  139 ccatcccaaaaagaaagtttcacaagtttataaacttgagaat-aaaactatccaaaaaacaaattaggtaatttcttcgaaaggtcaa 226  Q
    |||||| |||||||||||||||||||||  |||| |||  ||| ||||||||| |||||| ||| ||  |||||||||| |||||||||    
T  89776 ccatccaaaaaagaaagtttcacaagttcctaaagttgttaataaaaactatctaaaaaataaactatttaatttcttcaaaaggtcaa 89688  T

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Target: scaffold0347 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 578
Target Start/End: Complemental strand, 15226 - 15132
Alignment:
Q  488 acacgagtttactgagtgttaa----ctcagtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgttttt 578  Q
    ||||||||||||||||||||||    ||||||||||||||| |||| |||| ||||||||| ||| ||| |||||||| ||||||||||| ||||    
T  15226 acacgagtttactgagtgttaattaactcagtcaaactcgttaaaccttccaattttaccataaaccgattttacctcagagttaacacgatttt 15132  T

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Target: scaffold0433 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 600
Target Start/End: Complemental strand, 440 - 390
Alignment:
Q  550 cgagtttacctccgagttaacacgtttttagcacctaaacacgtagactcg 600  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||| |||||    
T  440 cgagtttacctccgagttaacacgtttttgccacataaaaacgtaaactcg 390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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