View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19885_low_8 (Length: 226)
Name: NF19885_low_8
Description: NF19885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19885_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 53129062 - 53128855
Alignment:
| Q |
1 |
acgattatagtgaatgccacatatgacgaccgttgcttacaattaaggtgtccgcaaagtagcaaactaaaagtaacaaataattggacagaatagtagc |
100 |
Q |
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| T |
53129062 |
acgattctagtgaatgccacatatgacgaccgttgcttacaattaaggtgtccgcaaagtagcaaactaaaagtaacaaataattggacagaatagtagc |
53128963 |
T |
|
| Q |
101 |
ataataaaaatactaccaccattacaaagcttaatacgaaagctacctgtgaatatattcttccaagtgtcctttgaacgtaggctgcgttcctcttttg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |
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| T |
53128962 |
ataataaaaatactaccaccattacaaagcttaatacgaaagctacctgtgaatatattcttccaagcgtcctttgaacttaggctgcgttcctcttttg |
53128863 |
T |
|
| Q |
201 |
gtatcaat |
208 |
Q |
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|||||||| |
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| T |
53128862 |
gtatcaat |
53128855 |
T |
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