View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19886_low_16 (Length: 251)
Name: NF19886_low_16
Description: NF19886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19886_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 32213364 - 32213149
Alignment:
| Q |
19 |
aaatctaacggtctacatttgtagatgatccaattccttcattaagttaattaattaagttttgtcttgtgtttggtgggtggtacacatcacatgacaa |
118 |
Q |
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| T |
32213364 |
aaatttaactgtctacatttatagatgattcaattccttcattaagttaattaattaagttttgtcttgtgtttggtggt------acatcacatgacaa |
32213271 |
T |
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| Q |
119 |
actcttaatcacatattctattcttaataatattctttctaaacttcattgagctttgtgcatatttttgcttccccaataaaacttgaccttaagcttc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
32213270 |
actcttaatcacatattctattcttaataatattctttctaaacttcattgagctttgtgcatatttttgcttccccaataaaacttgaccttaagtttc |
32213171 |
T |
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| Q |
219 |
tttgtttccacacttccttcat |
240 |
Q |
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|||||||||||||||||||||| |
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| T |
32213170 |
tttgtttccacacttccttcat |
32213149 |
T |
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