View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19886_low_6 (Length: 421)

Name: NF19886_low_6
Description: NF19886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19886_low_6
NF19886_low_6
[»] chr5 (42 HSPs)
chr5 (20-412)||(16611474-16611866)
chr5 (21-160)||(9538035-9538174)
chr5 (15-161)||(25590428-25590573)
chr5 (15-157)||(9537024-9537165)
chr5 (15-160)||(28591093-28591239)
chr5 (15-126)||(4592893-4593004)
chr5 (15-161)||(14891127-14891269)
chr5 (16-126)||(546017-546127)
chr5 (15-160)||(8074449-8074593)
chr5 (15-163)||(21069284-21069432)
chr5 (15-138)||(8075813-8075936)
chr5 (48-139)||(19182969-19183060)
chr5 (15-160)||(2464667-2464812)
chr5 (21-137)||(18004659-18004775)
chr5 (15-137)||(2466753-2466876)
chr5 (21-121)||(544685-544785)
chr5 (64-156)||(18400192-18400284)
chr5 (15-135)||(32640311-32640431)
chr5 (15-126)||(32641706-32641817)
chr5 (23-120)||(19186208-19186305)
chr5 (36-156)||(12445418-12445537)
chr5 (21-138)||(13483147-13483263)
chr5 (15-151)||(16978999-16979135)
chr5 (16-160)||(40612640-40612784)
chr5 (88-162)||(13651173-13651246)
chr5 (15-118)||(28589739-28589842)
chr5 (24-110)||(30970574-30970660)
chr5 (45-107)||(13483071-13483133)
chr5 (316-365)||(14863350-14863399)
chr5 (75-137)||(37072594-37072653)
chr5 (315-357)||(7609589-7609631)
chr5 (273-379)||(11320125-11320231)
chr5 (15-97)||(31947017-31947099)
chr5 (24-73)||(9502404-9502453)
chr5 (316-357)||(21052678-21052719)
chr5 (273-358)||(30293830-30293915)
chr5 (15-108)||(35538281-35538374)
chr5 (15-68)||(40611350-40611403)
chr5 (36-108)||(577886-577958)
chr5 (15-107)||(4594081-4594171)
chr5 (15-47)||(27720896-27720928)
chr5 (79-135)||(28865317-28865372)
[»] chr1 (44 HSPs)
chr1 (20-160)||(5782412-5782552)
chr1 (15-137)||(7945534-7945656)
chr1 (15-161)||(10333166-10333312)
chr1 (15-160)||(32665750-32665895)
chr1 (15-166)||(9341005-9341156)
chr1 (21-157)||(6612420-6612556)
chr1 (21-161)||(22856677-22856817)
chr1 (24-164)||(11060773-11060913)
chr1 (15-166)||(9339638-9339789)
chr1 (20-129)||(5783094-5783203)
chr1 (15-160)||(52439477-52439618)
chr1 (26-156)||(44719352-44719482)
chr1 (15-125)||(52440540-52440649)
chr1 (15-160)||(3117647-3117792)
chr1 (15-110)||(6613958-6614054)
chr1 (16-160)||(10332984-10333128)
chr1 (24-121)||(8975196-8975293)
chr1 (15-159)||(34088449-34088585)
chr1 (24-107)||(50107192-50107275)
chr1 (15-137)||(1407661-1407783)
chr1 (15-137)||(51450022-51450143)
chr1 (21-126)||(7944187-7944292)
chr1 (60-156)||(18897915-18898011)
chr1 (15-161)||(22857559-22857704)
chr1 (36-160)||(26519103-26519227)
chr1 (15-63)||(33342511-33342559)
chr1 (47-129)||(1001183-1001265)
chr1 (39-153)||(39726690-39726804)
chr1 (56-126)||(44020018-44020088)
chr1 (15-107)||(25037929-25038020)
chr1 (15-107)||(25043141-25043232)
chr1 (31-71)||(44720845-44720885)
chr1 (267-365)||(31884461-31884559)
chr1 (37-135)||(32664536-32664625)
chr1 (24-108)||(1001891-1001975)
chr1 (51-134)||(534574-534656)
chr1 (265-331)||(13351261-13351327)
chr1 (45-111)||(26518156-26518222)
chr1 (15-157)||(29765924-29766066)
chr1 (36-137)||(11829930-11830031)
chr1 (315-379)||(50127397-50127462)
chr1 (26-98)||(11059683-11059755)
chr1 (324-379)||(15419709-15419765)
chr1 (36-104)||(39725393-39725461)
[»] chr4 (34 HSPs)
chr4 (20-161)||(53771034-53771175)
chr4 (15-161)||(4703197-4703343)
chr4 (16-133)||(4701790-4701907)
chr4 (20-156)||(53770335-53770471)
chr4 (15-160)||(42278047-42278192)
chr4 (20-162)||(26685407-26685544)
chr4 (23-159)||(47878472-47878608)
chr4 (20-160)||(48740005-48740145)
chr4 (15-137)||(39868943-39869063)
chr4 (15-98)||(19050298-19050381)
chr4 (48-126)||(47874596-47874674)
chr4 (15-160)||(31844720-31844864)
chr4 (15-112)||(50694795-50694892)
chr4 (57-161)||(19051253-19051357)
chr4 (26-156)||(39870665-39870795)
chr4 (15-112)||(21621869-21621966)
chr4 (51-160)||(54574423-54574532)
chr4 (267-377)||(54248982-54249093)
chr4 (24-106)||(26172931-26173013)
chr4 (24-139)||(21623106-21623221)
chr4 (24-107)||(32244677-32244760)
chr4 (36-129)||(42391887-42391982)
chr4 (24-136)||(44158526-44158638)
chr4 (15-98)||(25810393-25810476)
chr4 (15-160)||(20599886-20600027)
chr4 (24-162)||(36453795-36453933)
chr4 (286-354)||(3319270-3319338)
chr4 (21-100)||(32244332-32244411)
chr4 (267-357)||(19147149-19147239)
chr4 (15-129)||(26170669-26170783)
chr4 (259-357)||(31647743-31647841)
chr4 (52-106)||(54574822-54574876)
chr4 (24-106)||(2786273-2786357)
chr4 (261-353)||(30116772-30116864)
[»] chr2 (48 HSPs)
chr2 (15-140)||(17466808-17466933)
chr2 (15-160)||(31091507-31091652)
chr2 (20-162)||(5914977-5915119)
chr2 (15-160)||(17330210-17330355)
chr2 (15-163)||(32766218-32766367)
chr2 (15-159)||(7073638-7073782)
chr2 (15-126)||(2910132-2910243)
chr2 (21-128)||(7412122-7412229)
chr2 (16-135)||(33161790-33161909)
chr2 (15-164)||(32764932-32765080)
chr2 (31-156)||(34582666-34582791)
chr2 (24-137)||(38853776-38853889)
chr2 (20-156)||(5914307-5914442)
chr2 (15-160)||(31814324-31814467)
chr2 (21-126)||(31090196-31090301)
chr2 (21-137)||(24459432-24459548)
chr2 (16-162)||(40000315-40000461)
chr2 (15-116)||(14704048-14704148)
chr2 (16-167)||(39016364-39016513)
chr2 (17-137)||(11985712-11985832)
chr2 (29-161)||(12746195-12746327)
chr2 (21-161)||(24458057-24458197)
chr2 (21-160)||(33163444-33163584)
chr2 (15-151)||(34037653-34037789)
chr2 (15-106)||(17466093-17466184)
chr2 (25-108)||(26586285-26586368)
chr2 (15-129)||(38984968-38985083)
chr2 (27-156)||(38856359-38856487)
chr2 (283-383)||(37913021-37913122)
chr2 (24-137)||(38854810-38854923)
chr2 (21-126)||(39257007-39257106)
chr2 (15-137)||(39015026-39015148)
chr2 (36-129)||(28864778-28864870)
chr2 (15-127)||(15441951-15442063)
chr2 (15-98)||(21733751-21733834)
chr2 (16-126)||(2911468-2911582)
chr2 (24-156)||(9616024-9616156)
chr2 (24-104)||(37607156-37607236)
chr2 (49-121)||(43380617-43380689)
chr2 (48-162)||(8420009-8420123)
chr2 (15-135)||(14887478-14887598)
chr2 (24-120)||(18675122-18675218)
chr2 (289-353)||(31904246-31904310)
chr2 (75-122)||(8420961-8421008)
chr2 (59-138)||(12396061-12396140)
chr2 (15-161)||(26585072-26585221)
chr2 (267-381)||(23788407-23788521)
chr2 (27-73)||(38854672-38854718)
[»] chr3 (44 HSPs)
chr3 (20-161)||(47075336-47075477)
chr3 (20-162)||(47118036-47118178)
chr3 (24-161)||(19114530-19114667)
chr3 (20-160)||(45600924-45601063)
chr3 (15-160)||(36278950-36279095)
chr3 (36-160)||(17700516-17700640)
chr3 (20-160)||(19115132-19115271)
chr3 (15-162)||(55388069-55388216)
chr3 (16-160)||(2591625-2591769)
chr3 (15-119)||(36280297-36280401)
chr3 (20-165)||(33428420-33428565)
chr3 (23-159)||(48572984-48573120)
chr3 (14-162)||(52318296-52318444)
chr3 (15-158)||(20464069-20464212)
chr3 (15-122)||(53959080-53959187)
chr3 (37-126)||(11773053-11773142)
chr3 (15-161)||(3671036-3671181)
chr3 (36-126)||(17701920-17702010)
chr3 (20-121)||(49261522-49261620)
chr3 (15-134)||(50753841-50753960)
chr3 (15-126)||(52317011-52317122)
chr3 (20-160)||(47428548-47428682)
chr3 (42-162)||(2592014-2592134)
chr3 (15-106)||(36827455-36827546)
chr3 (23-137)||(34263826-34263940)
chr3 (15-114)||(48574439-48574538)
chr3 (12-126)||(48808398-48808512)
chr3 (20-129)||(47427889-47427993)
chr3 (15-160)||(53957673-53957816)
chr3 (24-126)||(40205913-40206016)
chr3 (48-135)||(55389482-55389569)
chr3 (20-162)||(33427749-33427889)
chr3 (86-137)||(19331129-19331180)
chr3 (273-357)||(49710967-49711050)
chr3 (283-385)||(6785811-6785916)
chr3 (15-100)||(29188370-29188455)
chr3 (324-357)||(32720579-32720612)
chr3 (85-156)||(20464511-20464582)
chr3 (15-97)||(612275-612357)
chr3 (316-357)||(15671167-15671208)
chr3 (324-357)||(27144021-27144054)
chr3 (36-121)||(39497244-39497329)
chr3 (283-335)||(43024103-43024155)
chr3 (15-71)||(48809635-48809690)
[»] chr6 (17 HSPs)
chr6 (20-156)||(31219145-31219281)
chr6 (20-161)||(31218952-31219093)
chr6 (15-162)||(30747995-30748142)
chr6 (21-134)||(23507972-23508085)
chr6 (44-137)||(12676479-12676572)
chr6 (15-162)||(24940397-24940541)
chr6 (21-128)||(10855837-10855943)
chr6 (36-156)||(29845483-29845602)
chr6 (15-161)||(33987097-33987243)
chr6 (36-156)||(5265201-5265320)
chr6 (65-161)||(6468811-6468907)
chr6 (31-66)||(6752657-6752692)
chr6 (15-84)||(31239967-31240036)
chr6 (36-156)||(3778795-3778915)
chr6 (267-357)||(21809807-21809897)
chr6 (284-357)||(10008215-10008288)
chr6 (48-156)||(24621080-24621187)
[»] chr7 (53 HSPs)
chr7 (15-162)||(7258271-7258418)
chr7 (33-137)||(8374935-8375039)
chr7 (15-165)||(8048764-8048914)
chr7 (15-160)||(48788652-48788797)
chr7 (15-137)||(10899053-10899175)
chr7 (15-157)||(30924989-30925130)
chr7 (15-161)||(35727696-35727841)
chr7 (15-161)||(12223679-12223825)
chr7 (15-159)||(44333138-44333280)
chr7 (16-160)||(48647424-48647568)
chr7 (15-126)||(7259664-7259775)
chr7 (15-129)||(48646078-48646192)
chr7 (15-139)||(42477400-42477523)
chr7 (20-122)||(8375568-8375670)
chr7 (15-129)||(13578301-13578414)
chr7 (31-113)||(33607619-33607701)
chr7 (15-156)||(43457459-43457600)
chr7 (15-162)||(44334430-44334576)
chr7 (21-131)||(7509457-7509567)
chr7 (15-160)||(35729066-35729211)
chr7 (16-157)||(46286504-46286645)
chr7 (15-159)||(19433914-19434058)
chr7 (15-129)||(12220052-12220165)
chr7 (15-161)||(5930113-5930258)
chr7 (15-161)||(48777253-48777400)
chr7 (15-105)||(45584476-45584566)
chr7 (21-126)||(34888909-34889014)
chr7 (15-106)||(6680513-6680605)
chr7 (15-123)||(24288846-24288954)
chr7 (25-137)||(39708124-39708236)
chr7 (21-105)||(44530597-44530681)
chr7 (24-107)||(8879532-8879615)
chr7 (23-118)||(44529068-44529163)
chr7 (15-113)||(32793216-32793314)
chr7 (15-69)||(33060899-33060953)
chr7 (58-136)||(34704931-34705009)
chr7 (11-97)||(43461704-43461789)
chr7 (50-160)||(45583682-45583792)
chr7 (24-117)||(25621710-25621803)
chr7 (31-129)||(27067812-27067909)
chr7 (31-129)||(27210404-27210501)
chr7 (36-137)||(24844594-24844695)
chr7 (43-161)||(385619-385737)
chr7 (80-161)||(21062814-21062895)
chr7 (59-123)||(10894385-10894449)
chr7 (48-138)||(2677799-2677889)
chr7 (24-62)||(34707697-34707735)
chr7 (273-357)||(8117451-8117535)
chr7 (86-125)||(24934837-24934876)
chr7 (324-362)||(36636066-36636104)
chr7 (324-357)||(22035754-22035787)
chr7 (316-357)||(45907084-45907125)
chr7 (21-129)||(8046845-8046953)
[»] chr8 (36 HSPs)
chr8 (15-164)||(32898425-32898574)
chr8 (22-131)||(5965429-5965538)
chr8 (15-160)||(35178785-35178929)
chr8 (15-126)||(35177427-35177538)
chr8 (15-156)||(1952950-1953090)
chr8 (15-156)||(5738003-5738144)
chr8 (15-156)||(31073996-31074137)
chr8 (50-160)||(41754810-41754919)
chr8 (15-160)||(5736840-5736985)
chr8 (15-160)||(30134564-30134709)
chr8 (36-156)||(8569410-8569530)
chr8 (15-106)||(28524810-28524901)
chr8 (15-159)||(10407564-10407708)
chr8 (15-119)||(28619028-28619132)
chr8 (26-133)||(24198959-24199066)
chr8 (15-102)||(45476218-45476305)
chr8 (26-107)||(28619536-28619617)
chr8 (31-137)||(28005364-28005470)
chr8 (31-137)||(28062667-28062773)
chr8 (32-156)||(9626457-9626581)
chr8 (24-151)||(9625197-9625324)
chr8 (34-156)||(12637757-12637879)
chr8 (31-137)||(31075286-31075391)
chr8 (21-129)||(33314890-33314995)
chr8 (53-107)||(41121160-41121214)
chr8 (75-160)||(41753996-41754081)
chr8 (24-107)||(28006584-28006667)
chr8 (24-107)||(28063887-28063970)
chr8 (315-384)||(900283-900353)
chr8 (264-362)||(20821907-20822005)
chr8 (93-134)||(10405606-10405647)
chr8 (15-95)||(10406269-10406349)
chr8 (273-357)||(29795527-29795611)
chr8 (283-354)||(39065551-39065622)
chr8 (36-103)||(43190938-43191005)
chr8 (15-84)||(45476543-45476612)
[»] scaffold0039 (3 HSPs)
scaffold0039 (15-158)||(79073-79216)
scaffold0039 (15-161)||(79663-79809)
scaffold0039 (80-137)||(74358-74415)
[»] scaffold0034 (1 HSPs)
scaffold0034 (43-159)||(116054-116170)
[»] scaffold0767 (1 HSPs)
scaffold0767 (15-129)||(5628-5742)
[»] scaffold0237 (1 HSPs)
scaffold0237 (36-156)||(1688-1807)
[»] scaffold0006 (1 HSPs)
scaffold0006 (267-357)||(38823-38913)
[»] scaffold0369 (1 HSPs)
scaffold0369 (36-100)||(9137-9201)
[»] scaffold0117 (1 HSPs)
scaffold0117 (316-357)||(16880-16921)
[»] scaffold0068 (1 HSPs)
scaffold0068 (267-362)||(52029-52124)
[»] scaffold0016 (1 HSPs)
scaffold0016 (85-172)||(36573-36659)


Alignment Details
Target: chr5 (Bit Score: 360; Significance: 0; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 20 - 412
Target Start/End: Complemental strand, 16611866 - 16611474
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16611866 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagaggcttctttgtatttaatcctgagtcagagacctatgtga 16611767  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctcataaatagaatagtatggcacaagaacgaacaaaagagagaatgcggttgtgcctcaaa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16611766 cagcgaggtgtagagtcaagaattaaagtgaccatttgctcataaatagaatagtatggcacgagaacgaacaaaagagagaatgcggttgtgcctcaaa 16611667  T
Q  220 gctaagnnnnnnngtcttgctaaccaaccagtgccctacgacattgattaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgttttt 319  Q
    ||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16611666 gctaagaaaaaaagtcttgctaaccaaccagtgccctacgacactgattaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgttttt 16611567  T
Q  320 catcaagtaataattatattattttttaataaaaacttgcttttttgatatttaaccaatacccttataccatacaaataaacctagtataat 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16611566 catcaagtaataattatattattttttaataaaaacttgcttttttgatatttaaccaatacccttataccatacaaataaacctagtataat 16611474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 21 - 160
Target Start/End: Original strand, 9538035 - 9538174
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  9538035 cacttaacataattatttaacatcagagactaaaatgataacggaagtgcacaatcagagacttctttgtatttaatcctgagtcagggacctatatgac 9538134  T
Q  121 agcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    | |||| || ||||||| | |  |||||||| ||||||||    
T  9538135 aacgagatgcagagtcagggaccaaagtgactatttgctc 9538174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 25590573 - 25590428
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| |||| |||||||||||||| |||||||||||| |||||||| |||||||||||| |||||||||||||| ||||||| ||||||    
T  25590573 catcatcacttaacaaaattttttaacgtcagagattaaagtgataacagaagtgcagaatcagagacttatttgtatttaatcc-gagtcagggaccta 25590475  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    ||||||||||||||| |||||||  ||  |||||||| |||||||||    
T  25590474 tgtgacagcgaggtgcagagtcagaaaacaaagtgactatttgctca 25590428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 9537165 - 9537024
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| |||||| || |||||||||||||||| |||||||||||||| ||||||||| | |||  |||||||||||||||||| || |||||||||||||    
T  9537165 catcatcacttaccataattatttaacgtcagtgactaaagtgataatggaagtgcacagtcat-gacttctttgtatttaattctaagtcagagaccta 9537067  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttg 157  Q
    ||||||||||||||| ||||| | | | |||||| ||||||||    
T  9537066 tgtgacagcgaggtgcagagtgagggactaaagtcaccatttg 9537024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 28591093 - 28591239
Alignment:
Q  15 catcaacacttaacagaattatt-taacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacct 113  Q
    ||||| ||||||||||| || || ||||||| | |||||||||||||| ||||||||| | |||| || || |||||||||||||||||||||| |||||    
T  28591093 catcatcacttaacagattttttgtaacgtcggggactaaagtgataaaggaagtgcagagtcagggatttatttgtatttaatcctgagtcagggacct 28591192  T
Q  114 atgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||||||||||||||| ||||||| | || |||||||| ||||||||    
T  28591193 atgtgacagcgaggtgcagagtcagggatcaaagtgactatttgctc 28591239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 4593004 - 4592893
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||| | |||| ||||| ||||||||||||| |||||||| ||| ||    
T  4593004 catcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggactta 4592905  T
Q  115 tgtgacagcgag 126  Q
    ||||||||||||    
T  4592904 tgtgacagcgag 4592893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 14891127 - 14891269
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || |||||||||||||||||||||||||||||||||| | | ||||||||    ||| |||||||| |||||||||||||||    
T  14891127 catcatcacttaacatatttttttaacgtcagagactaaagtgataacggaagtgtagagtcagagac----ttgcatttaatcatgagtcagagaccta 14891222  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    ||||||||||||||| ||||| | | |  |||||||| |||||||||    
T  14891223 tgtgacagcgaggtgcagagtgagggaccaaagtgactatttgctca 14891269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 546017 - 546127
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctat 115  Q
    |||| ||||||||| | || ||||||||||| |||||||||||||||||||||||| | |||  ||||| | |||||||||||||||||||| |||||||    
T  546017 atcatcacttaacaaatttttttaacgtcagggactaaagtgataacggaagtgcagagtcaaggacttatctgtatttaatcctgagtcagggacctat 546116  T
Q  116 gtgacagcgag 126  Q
    |||||||||||    
T  546117 gtgacagcgag 546127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 8074593 - 8074449
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| |||||||| || || |||||||||||  ||||||||||||||||||||||| | |||| ||||| |||||||||||||||||||||| ||| ||    
T  8074593 catcatcacttaaccgattt-tttaacgtcaggaactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggactta 8074495  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||||||||||| || | | ||| | | ||||||||| ||||||||    
T  8074494 tgtgacagcgagctgcataatcagggactaaagtgactatttgctc 8074449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 21069432 - 21069284
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| |||| ||||||| || | | |||||||| ||| |||||||| | |||  ||||| ||||||||||||||||||||||||||||     
T  21069432 catcatcacttaacaaaattttttaacggcatatattaaagtgaaaacagaagtgcagagtcaaggacttatttgtatttaatcctgagtcagagacctc 21069333  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcata 163  Q
    ||||||| ||||||| |||||||   | ||||||||| |||||||||||    
T  21069332 tgtgacaacgaggtgcagagtcagagactaaagtgactatttgctcata 21069284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 8075813 - 8075936
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || || |||||||| |||||||||||||||| ||||||| ||||||| |||| ||||||||||||| ||| |||| || |||    
T  8075813 catcatcacttaacagattttttaaacgtcagggactaaagtgataacgaaagtgcagaatcagatacttttttgtatttaatcttgaatcagggatcta 8075912  T
Q  115 tgtgacagcgaggtgtagagtcaa 138  Q
    | | ||||||||||| ||||||||    
T  8075913 tctaacagcgaggtgcagagtcaa 8075936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 19183060 - 19182969
Alignment:
Q  48 gactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaag 139  Q
    |||||||||||||||||||||| | | ||||  |||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  19183060 gactaaagtgataacggaagtgtagagtcaggaacttatttgtatttaatcctgagtcagagacctatgtgacagcgaggtgcaaagtcaag 19182969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 2464812 - 2464667
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || |||||||||||||||||||||||||||| ||||||| | | || ||||| ||||||||||||| |||||||  ||||||    
T  2464812 catcatcacttaacaaatttttttaacgtcagagactaaagtgataacgtaagtgcagagttagggacttatttgtatttaatcatgagtcatggaccta 2464713  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    | |||||||||| || ||| |||   | ||||||||| ||||||||    
T  2464712 tatgacagcgagctgcagaatcagtgactaaagtgactatttgctc 2464667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 18004775 - 18004659
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||| ||  | |||| | ||||||    
T  18004775 cacttaacataactatttaacatcagagactaaagtgataacggaagtgcagagtcatagacctctttgtatttaatcctaagctatagacttttgtgac 18004676  T
Q  121 agcgaggtgtagagtca 137  Q
    || |||||| |||||||    
T  18004675 agtgaggtgcagagtca 18004659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 2466753 - 2466876
Alignment:
Q  15 catcaacacttaacagaattattt-aacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacct 113  Q
    ||||| ||||||||||| || ||| |||||||| |||||||||||||||||||||||| | | || ||||| ||| ||||||||||||| |||  |||||    
T  2466753 catcatcacttaacagattttttttaacgtcagggactaaagtgataacggaagtgcagagttagggacttatttttatttaatcctgaatcaatgacct 2466852  T
Q  114 atgtgacagcgaggtgtagagtca 137  Q
    |||||| ||||||||| |||||||    
T  2466853 atgtgatagcgaggtgcagagtca 2466876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 544785 - 544685
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| | || ||||| |||||| |||||| | |||||||||||||| | |||| ||||| |||||||||||||||||||||||||||||| ||||    
T  544785 cacttaacatatttttttaatgtcagaaactaaatttataacggaagtgcagagtcagtgacttatttgtatttaatcctgagtcagagacctatctgac 544686  T
Q  121 a 121  Q
    |    
T  544685 a 544685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 18400284 - 18400192
Alignment:
Q  64 gaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
    |||||||| | |||| ||||||||| |||||||||||||||||  |||||||||||||| |||||| ||||||| | | ||||||||||||||    
T  18400284 gaagtgcagagtcagtgacttctttttatttaatcctgagtcaaggacctatgtgacagtgaggtgcagagtcagggactaaagtgaccattt 18400192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 32640431 - 32640311
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || ||||||||||||||||||||||||||| |||||  | | | || ||||| ||||||||||||||||||| |  | ||||    
T  32640431 catcatcacttaacaaatttttttaacgtcagagactaaagtgataacagaagtttagagttagggacttatttgtatttaatcctgagttatggtccta 32640332  T
Q  115 tgtgacagcgaggtgtagagt 135  Q
    |||||||| |||||| |||||    
T  32640331 tgtgacagtgaggtgcagagt 32640311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 32641706 - 32641817
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || ||||||||||| || ||||||||||||||||||||| | ||||  |||| ||||||||||||| ||||| || ||||||    
T  32641706 catcatcacttaacatatttttttaacgtcagggattaaagtgataacggaagtgcagagtcagcaacttatttgtatttaatcttgagtaagggaccta 32641805  T
Q  115 tgtgacagcgag 126  Q
     |||||| ||||    
T  32641806 cgtgacaacgag 32641817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 19186208 - 19186305
Alignment:
Q  23 cttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| |  ||||||| ||  ||||||||||||||||||| || | | |||||||||| ||||||||||||||| |||||| ||||||||||||    
T  19186208 cttaacagattgttttaacgacaaggactaaagtgataacggaaatgtagagtcagagacttgtttgtatttaatcctaagtcagggacctatgtgac 19186305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 12445418 - 12445537
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    ||||||| | |||||||| ||||||||||||||||| | |||| |||| |||| |||||||| | || |||||||||| ||| | ||||||||| |||||    
T  12445418 tttaacgccggagactaaggtgataacggaagtgcacattcag-gactactttatatttaattccgaatcagagacctttgtaagagcgaggtgcagagt 12445516  T
Q  136 caagaattaaagtgaccattt 156  Q
    |||| || |||||||| ||||    
T  12445517 caaggatcaaagtgactattt 12445537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 13483147 - 13483263
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtat----ttaatcctgagtcagagacctatg 116  Q
    ||||||||||||||||||||||| ||      ||||||||||||||||||| | |||||||||| |||||||    |||||| ||||||| ||||||| |    
T  13483147 cacttaacagaattatttaacgttagg-----aagtgataacggaagtgcaaagtcagagacttgtttgtatttaattaatcatgagtcaaagacctacg 13483241  T
Q  117 tgacagcgaggtgtagagtcaa 138  Q
    || |||||||||| ||||||||    
T  13483242 tggcagcgaggtgcagagtcaa 13483263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 16979135 - 16978999
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||||| | ||||||| |||||||||| |||||||| |||| || | | || ||||| |||| ||||||| ||||||||  |||||     
T  16979135 catcatcacttaacagaataacttaacgttagagactaaaatgataacgtaagtacagagttagggacttatttgcatttaattctgagtcaatgacctt 16979036  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgac 151  Q
    |||| |||| ||||| | ||||||| | |||||||||    
T  16979035 tgtggcagcaaggtgcaaagtcaaggactaaagtgac 16978999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 40612640 - 40612784
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctat 115  Q
    |||| ||||||||||| || |||||||||||  | ||||||||||||||||||||| | ||||  |  | | |||||||||||||||||||| ||||||     
T  40612640 atcatcacttaacagatttttttaacgtcaggaattaaagtgataacggaagtgcagagtcaggaaaatatctgtatttaatcctgagtcagggacctac 40612739  T
Q  116 gtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||||||| ||| || | | ||| | | ||||||||| ||||||||    
T  40612740 gtgacagtgagctgcaaaatcagggactaaagtgactatttgctc 40612784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 13651173 - 13651246
Alignment:
Q  88 tgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    |||||||||||||||||||| ||||||||||||||| ||||| | ||||||| | ||||||||| ||||||||||    
T  13651173 tgtatttaatcctgagtcagggacctatgtgacagc-aggtgcacagtcaaggactaaagtgactatttgctcat 13651246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 28589842 - 28589739
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||||||||||| || |||||||||| || | ||| | |  | ||||||||||||  |||||||| ||||||    
T  28589842 catcatcacttaacagatttttttaacgtcagagactaaaatggtaacggaagtacaaagtcaaaaatgtatttgtatttaattatgagtcagggaccta 28589743  T
Q  115 tgtg 118  Q
    ||||    
T  28589742 tgtg 28589739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 30970574 - 30970660
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagaga 110  Q
    ||||||||||||||||| || || ||||||||||||||| ||| |||| | |||  || | |||||||||||||| |||||||||||    
T  30970574 ttaacagaattatttaatgttagggactaaagtgataacagaaatgcacattcaatgattactttgtatttaatcttgagtcagaga 30970660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 13483133 - 13483071
Alignment:
Q  45 agagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    |||||| |||||||||||| ||||||| | | |||||||||||| ||||||||| ||||||||    
T  13483133 agagacaaaagtgataacgaaagtgcagagtaagagacttctttatatttaatcatgagtcag 13483071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 14863399 - 14863350
Alignment:
Q  316 ttttcatcaagtaataattatattattttttaataaaaacttgctttttt 365  Q
    |||| ||||||||||||||| |||| |||||||||||||||| |||||||    
T  14863399 tttttatcaagtaataattacattaatttttaataaaaacttactttttt 14863350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 37072653 - 37072594
Alignment:
Q  75 tcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtca 137  Q
    ||||| ||| |||||||||||||  ||||||||||||||   |||||||||||||||||||||    
T  37072653 tcagatactactttgtatttaattatgagtcagagacct---tgacagcgaggtgtagagtca 37072594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 357
Target Start/End: Original strand, 7609589 - 7609631
Alignment:
Q  315 tttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||    
T  7609589 ttttttatcaagtaataattacattactttttaataaaaactt 7609631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 11320231 - 11320125
Alignment:
Q  273 aatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaacttgcttttttgatattt 372  Q
    |||||| || || ||||| ||||||| |||||||||  ||   |||| ||||||||||||||| |||| ||||||||||||| |  |||||||| |  ||    
T  11320231 aatctataattaaaatttctatcttagaaatataaactgtcactttttatcaagtaataattacattactttttaataaaaattaacttttttggtgctt 11320132  T
Q  373 aaccaat 379  Q
    |||||||    
T  11320131 aaccaat 11320125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 31947017 - 31947099
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaat 97  Q
    ||||| ||||||||| | || ||||||  ||| |||||||||||||||||||||  | | ||| |||||| ||||||||||||    
T  31947017 catcatcacttaacatatttttttaacagcagtgactaaagtgataacggaagtctagagtcatagacttgtttgtatttaat 31947099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 9502404 - 9502453
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcata 73  Q
    ||||||||||||||||| |||| | ||||||||||||| |||| ||||||    
T  9502404 ttaacagaattatttaatgtcataaactaaagtgataatggaaatgcata 9502453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 21052678 - 21052719
Alignment:
Q  316 ttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||| ||||||||||||||| || ||||||||||||||||||    
T  21052678 tttttatcaagtaataattacatgattttttaataaaaactt 21052719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 358
Target Start/End: Original strand, 30293830 - 30293915
Alignment:
Q  273 aatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaacttg 358  Q
    |||||| || ||||| |||| |||||||||||||| | |||  |||| |||||||||| |||| || ||||||| || ||||||||    
T  30293830 aatctacaaatagaaattttgtcttaaaaatataagatgttacttttgatcaagtaatgattacataattttttcatgaaaacttg 30293915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 35538281 - 35538374
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcaga 108  Q
    ||||| || |||||||||||||||||| | |  || ||||||||||||||||||||| | | |   ||| ||||||||||||||  ||||||||    
T  35538281 catcatcagttaacagaattatttaacattaaggattaaagtgataacggaagtgcacattgaagaactactttgtatttaatcacgagtcaga 35538374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 40611403 - 40611350
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagt 68  Q
    ||||| ||| ||||| | || |||||||||||||||||||||||||| ||||||    
T  40611403 catcatcacctaacatatttttttaacgtcagagactaaagtgataagggaagt 40611350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 577958 - 577886
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcaga 108  Q
    |||| ||| ||||| |||| |||||||| || |||| | | ||||||| |||||||||||||||| |||||||    
T  577958 tttagcgtgagagattaaactgataacgaaaatgcacactgagagactactttgtatttaatcctaagtcaga 577886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 4594081 - 4594171
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    ||||| |||||||||||  | |||||||| || || ||| ||||||| ||||||||| | |||  ||||| ||||||||||||||||||||||    
T  4594081 catcatcacttaacagatctttttaacgtaagggattaa-gtgataatggaagtgcagagtcat-gacttatttgtatttaatcctgagtcag 4594171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 27720896 - 27720928
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcaga 47  Q
    ||||| |||||||||||||||||||||||||||    
T  27720896 catcatcacttaacagaattatttaacgtcaga 27720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 28865317 - 28865372
Alignment:
Q  79 agacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    ||||| ||||||||||||| ||||||||| || || | |||||||||||||||||||    
T  28865317 agactactttgtatttaatactgagtcag-gatctttatgacagcgaggtgtagagt 28865372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 6e-50; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 5782552 - 5782412
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5782552 acacttaataaaattatttaacgtcagagactaaagtgataagggaagtgcataatcagagacttctttgtatttaatcatgagtcagagacctatgtga 5782453  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||||||||| ||||||| | | |||| |||| ||||||||    
T  5782452 cagcgaggtgcagagtcagggactaaaatgacaatttgctc 5782412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 7945534 - 7945656
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| |||||| || | || ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||    
T  7945534 catcatcacttagcatatttttttaacgtcagggactaaagtgataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaggaaccta 7945633  T
Q  115 tgtgacagcgaggtgtagagtca 137  Q
    ||||||||||||||| |||||||    
T  7945634 tgtgacagcgaggtgcagagtca 7945656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 10333166 - 10333312
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || |||||||  ||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||    
T  10333166 catcatcacttaacagatttttttaacgctagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtcagagaccta 10333265  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    ||| |||||||| || ||| |||   |||| |||||| |||||||||    
T  10333266 tgtaacagcgagctgcagaatcagagattatagtgactatttgctca 10333312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 32665750 - 32665895
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || | ||||| ||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||| |||||||||||||||    
T  32665750 catcatcacttaacagatttttgtaacgccagggactaaagtgataacggaagtgcagagtcaaagacttatttgtatttaatcatgagtcagagaccta 32665849  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||||||||||| || ||| ||| | | ||||||||| ||||||||    
T  32665850 tgtgacagcgagctgcagaatcagggactaaagtgactatttgctc 32665895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 9341005 - 9341156
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||| ||| || ||||||||||||||||||||||||||| |||||||| | |||||||||| |||||||||||||||||||||| ||||||    
T  9341005 catcatcacttaatagatttttttaacgtcagagactaaagtgataacagaagtgcaaagtcagagacttatttgtatttaatcctgagtcagggaccta 9341104  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcataaat 166  Q
    ||||| || ||| || ||| | ||  || |||||||| ||||||||| ||||    
T  9341105 tgtgatagtgagatgcagaataaatgatcaaagtgactatttgctcaaaaat 9341156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 6612556 - 6612420
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| |||||||||||||||| || ||||||||||| ||||||||| | |||||||||| ||||||||||||| |||||||||||| | | | ||    
T  6612556 cacttaacaaaattatttaacgtcagggattaaagtgataatggaagtgcagagtcagagacttgtttgtatttaatcatgagtcagagacatttataac 6612457  T
Q  121 agcgaggtgtagagtcaagaattaaagtgaccatttg 157  Q
    ||||||||| ||||||| | | ||||||||| |||||    
T  6612456 agcgaggtgcagagtcagggactaaagtgactatttg 6612420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 22856817 - 22856677
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||   | || ||| ||    
T  22856817 cacttaacataattatttaacgtcggagactaaagtgataacggaagtgcagagttagagacttctttgtatttaatcctgagtcaagaatctttgtaac 22856718  T
Q  121 agcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    | || |||| |||||||   | |||||||||||||||||||    
T  22856717 aacgtggtgcagagtcagtgactaaagtgaccatttgctca 22856677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 11060773 - 11060913
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagc 123  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||  | |||| ||||  ||||||||||||  |||||||  ||||| |||||||||    
T  11060773 ttaacagaattatttaacgtcggggactaaagtgataacgaaagtgcccattcagggactattttgtatttaattttgagtcatggacctttgtgacagc 11060872  T
Q  124 gaggtgtagagtcaagaattaaagtgaccatttgctcataa 164  Q
    |||||| | ||||||| || ||||||||||||| |||||||    
T  11060873 gaggtgcatagtcaaggatcaaagtgaccatttactcataa 11060913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 9339789 - 9339638
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||| | || | || || |||||||||||||||||||||| ||||||    
T  9339789 catcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcggggatttatttgtatttaatcctgagtcagggaccta 9339690  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcataaat 166  Q
    ||| ||| |||| || ||| ||| | | ||||| ||| ||||||||| ||||    
T  9339689 tgtaacaacgagctgcagaatcagggactaaagggactatttgctcaaaaat 9339638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 5783094 - 5783203
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||| | |||  |||||||||||||||||| |||||||   || ||||||||    
T  5783094 acacttaacagaattatttaacgctagtgactaaagtgataacggaagtgcagagtcatggacttctttgtatttaattctgagtcgaggatctatgtga 5783193  T
Q  120 cagcgaggtg 129  Q
    ||||||||||    
T  5783194 cagcgaggtg 5783203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 52439618 - 52439477
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| ||||||||||||||||||| ||||     |||||||| | |||||||||||||||| ||||||||||    
T  52439618 catcatcacttaacagatttttttaacgtcagggactaaagtgataacggaaatgca----gagagacttatctgtatttaatcctgagccagagaccta 52439523  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||||||||||| || ||| ||| |   ||||||||| ||||||||    
T  52439522 tgtgacagcgagctgcagaatcaggggctaaagtgactatttgctc 52439477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 44719482 - 44719352
Alignment:
Q  26 aacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcga 125  Q
    |||| |||||||||| | ||||||||||| |||||||||||||||||| ||| | ||| |||| ||||||||||||||| ||||| || ||||||| |||    
T  44719482 aacaaaattatttaaagacagagactaaaatgataacggaagtgcatattcataaactactttatatttaatcctgagttagagatctttgtgacaacga 44719383  T
Q  126 ggtgtagagtcaagaattaaagtgaccattt 156  Q
    | || | ||||||| || |||||||||||||    
T  44719382 gatgcaaagtcaaggatcaaagtgaccattt 44719352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 52440540 - 52440649
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || |||||||||| ||||||||||||||| ||||||||| | |||||||||| ||| ||||||||||||| |||| ||||||    
T  52440540 catcatcacttaacacatttttttaacgtca-agactaaagtgataatggaagtgcagagtcagagacttatttatatttaatcctgactcagggaccta 52440638  T
Q  115 tgtgacagcga 125  Q
    |||||||||||    
T  52440639 tgtgacagcga 52440649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 3117792 - 3117647
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| || |||||| ||||||||||| |||||  |||||||||||||||||||| | | ||||||| |||||||||||||||| ||||||||||||||     
T  3117792 catcatcaattaacaaaattatttaacttcagacgctaaagtgataacggaagtggagagtcagagatttctttgtatttaatcttgagtcagagacctt 3117693  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||||| | ||| ||| ||||| | | | |||| |||| ||||||||    
T  3117692 tgtgataacgatgtgaagagttagggactaaaatgactatttgctc 3117647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 6613958 - 6614054
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagag-actaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagaga 110  Q
    ||||| ||||||||| |||||||||||||| ||| |||||| ||||||| |||||||| | |||||||||| |||||||||||||||||||||||||    
T  6613958 catcatcacttaacaaaattatttaacgtcggaggactaaaatgataactgaagtgcagagtcagagacttatttgtatttaatcctgagtcagaga 6614054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 10333128 - 10332984
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctat 115  Q
    |||| ||||||||||| || ||||||||||  ||||||| |||||||||||||||| | | || ||||| ||| ||||||||||||| |||  |||||||    
T  10333128 atcatcacttaacagatttttttaacgtcaaggactaaaatgataacggaagtgcagagtaagggacttatttatatttaatcctgaatcaaggacctat 10333029  T
Q  116 gtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||||| ||||||| | ||||| | | ||||||||| ||||||||    
T  10333028 gtgacaacgaggtgcaaagtcagggactaaagtgactatttgctc 10332984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 8975293 - 8975196
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgaca 121  Q
    |||||| |||||||||||| || ||||||||||||||||| ||||||||| |||  |||| |||| ||||||||| |||||||| ||||| |||||||    
T  8975293 ttaacaaaattatttaacgccaaagactaaagtgataacgaaagtgcatattcatggactactttatatttaatcttgagtcagggacctttgtgaca 8975196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 34088449 - 34088585
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| |||||||||| ||||  || ||||||||||  ||||||||| | |||||||||||||||||||||||| |        |||||     
T  34088449 catcatcacttaacataattatttaatgtcaaggattaaagtgatagtggaagtgcagagtcagagacttctttgtatttaatcat--------gacctt 34088540  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgct 159  Q
    |||||||||||| |||||||||| | | ||||||||| |||||||    
T  34088541 tgtgacagcgagatgtagagtcagggactaaagtgacaatttgct 34088585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 50107192 - 50107275
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    |||||| |||||||||||| ||  |||||||||||||||||||||||| | |||||||||  ||||||||||||||||| ||||    
T  50107192 ttaacataattatttaacgccaaggactaaagtgataacggaagtgcacattcagagactattttgtatttaatcctgaatcag 50107275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 1407783 - 1407661
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| || |||||| |||||||||||||||| |||||||||||||||  ||||||||| ||||| ||| |||| |||||| || | |||||  |||||     
T  1407783 catcatcagttaacaaaattatttaacgtcagggactaaagtgataacataagtgcatattcagaaactactttatatttagtcataagtcatggacctt 1407684  T
Q  115 tgtgacagcgaggtgtagagtca 137  Q
    ||||||| | ||||| |||||||    
T  1407683 tgtgacaacaaggtgcagagtca 1407661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 51450143 - 51450022
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| ||||||||||||||||| |||||| |||| ||| ||||||| | ||||| ||||||||| |||||||  ||||| ||  ||||     
T  51450143 catcaccacttaacaaaattatttaacgtcagatactaaaatgat-acgaaagtgcagagtcagaaacttctttgcatttaattatgagttaggaacctt 51450045  T
Q  115 tgtgacagcgaggtgtagagtca 137  Q
    |||||| |||||||| |||||||    
T  51450044 tgtgacggcgaggtgcagagtca 51450022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 7944292 - 7944187
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| | || |||||||| || ||||||| |||||||| ||||||| | |||  ||||| ||||||||||||  |||||||| ||||||||||||    
T  7944292 cacttaacatatttttttaacgttagggactaaattgataacgaaagtgcagagtcaaggacttatttgtatttaattttgagtcagggacctatgtgac 7944193  T
Q  121 agcgag 126  Q
    ||||||    
T  7944192 agcgag 7944187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 18897915 - 18898011
Alignment:
Q  60 aacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
    |||| ||||||| | ||| ||||  |||| |||||||||||||||||||||||| |||||||  ||| || |||||||||||| |||||||||||||    
T  18897915 aacgtaagtgcacattcaaagacaactttatatttaatcctgagtcagagacctttgtgacaatgagttgcagagtcaagaatcaaagtgaccattt 18898011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 22857559 - 22857704
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| |||||||||||||||  |||||||||||||||||||||||| | ||| ||| || ||| ||| |||| || | | |||||| |     
T  22857559 catcatcacttaacataattatttaacgtcatggactaaagtgataacggaagtgcaaagtcatagatttttttatatataattctaaatgagagacttt 22857658  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
     || ||||| ||||| | |||||| ||||||||| ||||||| ||||    
T  22857659 ggtaacagcaaggtgca-agtcaaaaattaaagtaaccatttactca 22857704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 26519103 - 26519227
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    ||||||| |||||| |||| |||||||  ||||||| | ||| ||||| |||||||||||| || |||| || ||||| | ||||| |||| | ||||||    
T  26519103 tttaacgccagagattaaactgataacaaaagtgcacattcaaagactactttgtatttaacccggagttagggacctttatgacaacgagatttagagt 26519202  T
Q  136 caagaattaaagtgaccatttgctc 160  Q
    |||| |  |||||||||||||||||    
T  26519203 caaggaccaaagtgaccatttgctc 26519227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 33342559 - 33342511
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacg 63  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  33342559 catcatcacttaacataattatttaacgtcagagactaaagtgataacg 33342511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 1001265 - 1001183
Alignment:
Q  47 agactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtg 129  Q
    |||||||| ||||||| |||||||| | ||||||||| ||||||||||||||| ||||||  ||||| |||| || |||||||    
T  1001265 agactaaactgataacagaagtgcacattcagagactactttgtatttaatcccgagtcatggacctttgtggcaacgaggtg 1001183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 39726690 - 39726804
Alignment:
Q  39 aacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaa 138  Q
    ||||||| |||||||| ||||||  ||| ||||   ||||||||| |||| ||||||||||| ||||| |||||||||| ||| ||||||||| ||| ||    
T  39726690 aacgtcaaagactaaactgataaacgaaatgcactttcagagactactttatatttaatcctaagtcaaagacctatgtaacaacgaggtgtacagttaa 39726789  T
Q  139 gaattaaagtgacca 153  Q
    | | |||| ||||||    
T  39726790 ggactaaaatgacca 39726804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 44020088 - 44020018
Alignment:
Q  56 tgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgag 126  Q
    |||||||| ||||||| | |||||||||||||| ||||||||| |||||||||||| | ||||||| ||||    
T  44020088 tgataacgtaagtgcagagtcagagacttctttatatttaatcttgagtcagagacttttgtgacaacgag 44020018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 25038020 - 25037929
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    ||||| ||||||||| ||||||  || ||| || ||||||||||||||| |||| || | |||| ||||||||||||||||||| ||||||||    
T  25038020 catcatcacttaacataattatc-aatgtcggaaactaaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtcag 25037929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 25043232 - 25043141
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    ||||| ||||||||| ||||||  || ||| || ||||||||||||||| |||| || | |||| ||||||||||||||||||| ||||||||    
T  25043232 catcatcacttaacataattatc-aatgtcggaaactaaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtcag 25043141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 44720845 - 44720885
Alignment:
Q  31 aattatttaacgtcagagactaaagtgataacggaagtgca 71  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  44720845 aattatttaacgtcagagactaaagtgataatggaagtgca 44720885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 365
Target Start/End: Original strand, 31884461 - 31884559
Alignment:
Q  267 ttaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaacttgctttttt 365  Q
    |||| ||||||| || |||||||| ||||||  |||||||||  |   ||||| ||||| ||||||||| |||| |||||||||||||||| |||||||    
T  31884461 ttaagaaatctataaatagaatttctatcttggaaatataaactgacattttttatcaaataataattacattactttttaataaaaacttactttttt 31884559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 32664625 - 32664536
Alignment:
Q  37 ttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    |||||||||  ||||||||||||||||||||||||        || || ||||||||||||||||||||| |||||||| | ||||||||||| |||||    
T  32664625 ttaacgtcaaggactaaagtgataacggaagtgca--------gagttatttgtatttaatcctgagtca-agacctatataacagcgaggtgcagagt 32664536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 1001891 - 1001975
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcaga 108  Q
    |||||| |||| |||||||| |||||||||| ||||||||||||| || | ||| |||||  ||| ||||||||  |||||||||    
T  1001891 ttaacaaaattttttaacgttagagactaaactgataacggaagtacacattcatagactaatttttatttaattatgagtcaga 1001975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 534574 - 534656
Alignment:
Q  51 taaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagag 134  Q
    |||||||||||| |||||| | | |||| ||||| ||||||||||||||||| |||   |||||||| ||||||||||| ||||    
T  534574 taaagtgataacagaagtgtagagtcag-gacttgtttgtatttaatcctgaatcaagaacctatgtaacagcgaggtgcagag 534656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 13351261 - 13351327
Alignment:
Q  265 gattaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaata 331  Q
    |||||| |||||| |||||||||||||||||||  |||||||||  |||  |||||||||| |||||    
T  13351261 gattaagaaatctcaaagtagaatttttatctttgaaatataaactgttaattttcatcaaataata 13351327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 26518222 - 26518156
Alignment:
Q  45 agagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagac 111  Q
    |||||||||| ||||||||||| |||| | |||   ||| |||||||||||||| ||||||||||||    
T  26518222 agagactaaattgataacggaactgcacattcatgaactactttgtatttaatcttgagtcagagac 26518156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 29766066 - 29765924
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| || |||||| |||||||||||   | |||||||||||||||| |||||||| |  || ||||| |||| |  |||||  |||||||| |||||     
T  29766066 catcatcaattaacaaaattatttaacactatagactaaagtgataacagaagtgcacatccatagactactttcttattaattatgagtcagtgacctt 29765967  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttg 157  Q
    |||||||  |||||| |||||| || |  ||| ||||||||||    
T  29765966 tgtgacaaagaggtgcagagtctaggaccaaattgaccatttg 29765924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 11830031 - 11829930
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    |||||||||| || ||||| | ||||||||| ||||||  ||  ||||  ||||||||||||| ||||| || ||||| ||||||| |||| | ||||||    
T  11830031 tttaacgtcaaagcctaaactaataacggaaatgcatatacaaggactaatttgtatttaatcttgagttagtgacctttgtgacaacgagatatagagt 11829932  T
Q  136 ca 137  Q
    ||    
T  11829931 ca 11829930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 379
Target Start/End: Original strand, 50127397 - 50127462
Alignment:
Q  315 tttttcatcaagtaataattatattattttttaataaaaacttgctt-ttttgatatttaaccaat 379  Q
    ||||| ||| ||||||||||| |||| |||||||||||||||| ||| ||||| || |||||||||    
T  50127397 ttttttatcgagtaataattacattactttttaataaaaacttacttcttttggtacttaaccaat 50127462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 11059755 - 11059683
Alignment:
Q  26 aacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatc 98  Q
    |||| ||||||||||||||||||| ||||||||| | |||||| || | ||||  | | ||||||||||||||    
T  11059755 aacataattatttaacgtcagagattaaagtgatcatggaagtacacattcaggaattactttgtatttaatc 11059683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 15419709 - 15419765
Alignment:
Q  324 aagtaataattatattattttttaataaaaacttgcttt-tttgatatttaaccaat 379  Q
    ||||||||||||||||| ||||||||||||| || |||| |||| | ||||||||||    
T  15419709 aagtaataattatattactttttaataaaaatttactttatttggtgtttaaccaat 15419765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 39725461 - 39725393
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagt 104  Q
    |||||||||| |||||||| | |||||||||||||||| |||   |||  ||||||||||||| |||||    
T  39725461 tttaacgtcaaagactaaactaataacggaagtgcatattcaataactattttgtatttaatcatgagt 39725393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 53771034 - 53771175
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| | |||| | |||||||||||||||| ||||||||| |||||||||||    
T  53771034 acacttaacagaattatttaacgtcaatgactaaagtgataacggaagtgcagagtcaggggcttctttgtatttaattctgagtcagggacctatgtga 53771133  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    || ||||||| ||||||| | | |||||||||||||||||||    
T  53771134 caacgaggtgcagagtcagggactaaagtgaccatttgctca 53771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 4703197 - 4703343
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||| |||||||||||| | |||||||||||||||||||||||||| | | ||| ||||||||||||||||||| |||||| || ||||||    
T  4703197 catcatcacttaatagaattatttaatgccagagactaaagtgataacggaagtgtacagtcaaagacttctttgtatttaattctgagttagggaccta 4703296  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    |||||||||||| ||||||||||  || ||||||||| |||||||||    
T  4703297 tgtgacagcgagatgtagagtcagtaactaaagtgacaatttgctca 4703343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 4701907 - 4701790
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctat 115  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||| |||||||||||| || | ||||||||||||||||||| | ||||| |||||| |    
T  4701907 atcatcacttaacagaattatttaacatcagggactaaagtgatagcggaagtgcatagtcggggacttctttgtatttaatcataagtcatagaccttt 4701808  T
Q  116 gtgacagcgaggtgtaga 133  Q
    ||||||||||||||||||    
T  4701807 gtgacagcgaggtgtaga 4701790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 53770471 - 53770335
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    ||||||||||||||||||||||| ||||||||| |||||||| ||||||||| | ||| ||||||||||||||||||| |||||||||  ||||||||||    
T  53770471 acacttaacagaattatttaacggcagagactagagtgataatggaagtgcagagtcatagacttctttgtatttaattctgagtcaggaacctatgtga 53770372  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
      |||||||| |||||||   | ||||||||||||||    
T  53770371 atgcgaggtgcagagtcagagactaaagtgaccattt 53770335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 42278192 - 42278047
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| || ||||||||||||||||||||| | ||||  |||| |||||||||||||| ||||||| ||||||    
T  42278192 catcatcacttaacagatttttttaacgtcagggattaaagtgataacggaagtgcagagtcaggaacttatttgtatttaatcccgagtcagggaccta 42278093  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||||||||| || || ||| ||||| | ||||||||| ||||||||    
T  42278092 tgtgacagcaagctgcagaatcaaggactaaagtgactatttgctc 42278047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 26685407 - 26685544
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  ||||||| |||||||||     ||| || |||||||||||    
T  26685407 acacttaacagaattatttaatgtcagagactaaagtgataacggaagtgcatagtcaaggacttctatgtatttaa-----agtgagggacctatgtga 26685501  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    |||||||||| ||||||| | | |||| | ||||||| |||||    
T  26685502 cagcgaggtgcagagtcagggactaaaataaccatttcctcat 26685544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 47878472 - 47878608
Alignment:
Q  23 cttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacag 122  Q
    ||||||||| ||  |||||||||  |||||||||||||||||||||| | | |||| ||||| |||||||||||||| ||||||| ||||||||| ||||    
T  47878472 cttaacagattttattaacgtcatggactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatccagagtcagggacctatgtaacag 47878571  T
Q  123 cgaggtgtagagtcaagaattaaagtgaccatttgct 159  Q
    ||||||| ||||||| | || |||||||| |||||||    
T  47878572 cgaggtgcagagtcagggatcaaagtgactatttgct 47878608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 48740005 - 48740145
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| | |  | ||||||||||||||||||  |||||||| || ||| ||||    
T  48740005 acacttaacagaattatttaacgtcagggactaaagtgataacagaagtgcagagttggggacttctttgtatttaattatgagtcagggatctacgtga 48740104  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||  |||||| |||| || | | ||||||||||||||||||    
T  48740105 caatgaggtgcagagacatggactaaagtgaccatttgctc 48740145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 39869063 - 39868943
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| | || || |||| ||||||||||||  |||||||| |||||     
T  39869063 catcatcacttaacataattatttaacgtcagagactaaagtgataacggaagtgcagagtc-ga-acttgtttgtatttaattatgagtcagggacctt 39868966  T
Q  115 tgtgacagcgaggtgtagagtca 137  Q
    ||| ||||||||||| |||||||    
T  39868965 tgtaacagcgaggtgcagagtca 39868943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 19050381 - 19050298
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatc 98  Q
    ||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||    
T  19050381 catcatcacttaatagaattatttaacgtcggagactaaagtgataacggaagtgcagagtccgagacttctttgtatttaatc 19050298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 47874674 - 47874596
Alignment:
Q  48 gactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgag 126  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||||||| ||||||||||| ||||||    
T  47874674 gactaaagtgataacggaagtgcagaatcagggacttatttgtatttaatcttgagtcagggacctatgtgatagcgag 47874596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 31844864 - 31844720
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || || |||| ||| ||| |||||||||| ||||||| | | | || ||||| |||||||||||||||||||||| ||||||    
T  31844864 catcatcacttaacagattt-ttaaacgacagtgaccaaagtgataagggaagtgtagagttagggacttgtttgtatttaatcctgagtcagggaccta 31844766  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||||||||||||||| ||||  | | | ||||||||| ||||||||    
T  31844765 tgtgacagcgaggtgcagagctagggactaaagtgactatttgctc 31844720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 50694892 - 50694795
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacc 112  Q
    ||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||| |||| ||| ||||||||  |||||||| ||||    
T  50694892 catcatcacttaacagaattttttaacgtcagggactaaagagataacggaagtgcagaatcagaaacttatttatatttaattttgagtcagggacc 50694795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 161
Target Start/End: Original strand, 19051253 - 19051357
Alignment:
Q  57 gataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
    ||||||| ||||| | | ||||||||||||||||||||||||  ||||||| ||||| |||| || ||||||||||||||| | | ||||||||||||||    
T  19051253 gataacgaaagtgtagagtcagagacttctttgtatttaatctcgagtcagtgacctttgtgccaacgaggtgtagagtcagggactaaagtgaccattt 19051352  T
Q  157 gctca 161  Q
    |||||    
T  19051353 gctca 19051357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 39870665 - 39870795
Alignment:
Q  26 aacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcga 125  Q
    ||||||||||||||||| | |||||| |||||||| |||||||||| | |||| || |||| ||| ||||||| ||| ||||  || |||||||||||||    
T  39870665 aacagaattatttaacgcctgagactgaagtgatatcggaagtgcagagtcagtgatttctctgtgtttaatcttgactcaggaacttatgtgacagcga 39870764  T
Q  126 ggtgtagagtcaagaattaaagtgaccattt 156  Q
    |||| |||||||   |||||||||| |||||    
T  39870765 ggtgcagagtcagagattaaagtgatcattt 39870795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 21621966 - 21621869
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacc 112  Q
    ||||| || |||||| ||||||||||| |||| |||||||||||||||||||||||| | |||  ||||  |||||||||||||||||||||| ||||    
T  21621966 catcatcagttaacataattatttaacatcagggactaaagtgataacggaagtgcacattcaatgactattttgtatttaatcctgagtcagggacc 21621869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 54574532 - 54574423
Alignment:
Q  51 taaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtga 150  Q
    ||||||||||||||||||||| | | |   |||| ||||||||||||||||||||||||||||||||||||||||| || ||||| | |||  ||| |||    
T  54574532 taaagtgataacggaagtgcagagttaagaacttatttgtatttaatcctgagtcagagacctatgtgacagcgagatgcagagtgaggaagcaaaatga 54574433  T
Q  151 ccatttgctc 160  Q
    | ||||||||    
T  54574432 ctatttgctc 54574423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 267 - 377
Target Start/End: Complemental strand, 54249093 - 54248982
Alignment:
Q  267 ttaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaacttgctt-tttt 365  Q
    |||| |||||||||| |||||||| ||| |||||||||||||  ||| ||||| ||||||| ||||||| | ||||||||||||||||||| ||| ||||    
T  54249093 ttaagaaatctaaaaatagaatttatattttaaaaatataaactgttattttttatcaagtgataattacaatattttttaataaaaacttacttctttt 54248994  T
Q  366 gatatttaacca 377  Q
    ||  ||||||||    
T  54248993 gaggtttaacca 54248982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 26172931 - 26173013
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtca 106  Q
    |||||| |||| ||||||| ||  |||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||||    
T  26172931 ttaacataattttttaacggcatggactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtca 26173013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 21623106 - 21623221
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagc 123  Q
    |||||| |||||||||||||| | ||||||||||||||| |||||||| | |||  ||||  ||||||||||||||||| |||| || |  ||||||| |    
T  21623106 ttaacataattatttaacgtcggggactaaagtgataacagaagtgcacattcaaggactattttgtatttaatcctgaatcagggaacattgtgacaac 21623205  T
Q  124 gaggtgtagagtcaag 139  Q
    ||| || |||||||||    
T  21623206 gagatgcagagtcaag 21623221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 32244677 - 32244760
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||| | |||  |||| |||||| ||||||||||| ||||    
T  32244677 ttaacaaaattatttaacgtcagggactaaagtgataacggatgtgcacattcaaggactactttgtctttaatcctgaatcag 32244760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 42391887 - 42391982
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcata--atcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtg 129  Q
    ||||||||| | ||||||| |||||| ||||||||| |  || || ||||  ||||||||||||| ||||||||||||||||||||||| ||||||    
T  42391887 tttaacgtctgggactaaactgataaaggaagtgcacattattagggactaatttgtatttaatcatgagtcagagacctatgtgacagtgaggtg 42391982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 44158638 - 44158526
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagc 123  Q
    |||||| ||||||||||||| || || |||||| |||||  ||||  | | |||| ||||||||||||||||||||||||||||  |||| ||| ||| |    
T  44158638 ttaacataattatttaacgttagggattaaagtaataacaaaagtatagagtcagggacttctttgtatttaatcctgagtcaggaacctctgtaacaac 44158539  T
Q  124 gaggtgtagagtc 136  Q
    |||||| ||||||    
T  44158538 gaggtgcagagtc 44158526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 25810393 - 25810476
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatc 98  Q
    ||||| || ||||||||| |  |||||||||||||||||||||||| |||||||||| | ||| || || ||||||||||||||    
T  25810393 catcatcagttaacagaagttattaacgtcagagactaaagtgatagcggaagtgcacattcataggctactttgtatttaatc 25810476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 20599886 - 20600027
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| ||||||||||  || | |||||||||||||||  ||||| |   | |||||||||||| ||||||||| ||| | ||| ||||     
T  20599886 catcatcacttaacataattatttaatatcggggactaaagtgataaccaaagtgtagtgt-agagacttctttctatttaatcttgaattagaaacctt 20599984  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||||||||| | ||||||||| | ||   |||||||||||||||||    
T  20599985 tgtgacagcaaagtgtagagttagga---aaagtgaccatttgctc 20600027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 162
Target Start/End: Original strand, 36453795 - 36453933
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagc 123  Q
    |||||| ||||||||||||||| |  | ||||||||| |  ||||| | | |||||| |||||||| |||||||||| | |||| ||||| ||| | |||    
T  36453795 ttaacaaaattatttaacgtcaaatgccaaagtgatagcaaaagtgaagagtcagaggcttctttgcatttaatcctaaatcagggacctttgtaatagc 36453894  T
Q  124 gaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    ||| || ||| ||||  | ||||| ||||||||||||||    
T  36453895 gagatgcagaatcaatgactaaagggaccatttgctcat 36453933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 3319270 - 3319338
Alignment:
Q  286 aatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaa 354  Q
    ||||| ||| |||||||||||||  ||  ||||||||||| ||||||||||||||  ||||||||||||    
T  3319270 aatttctattttaaaaatataaactgtcatttttcatcaaataataattatattaccttttaataaaaa 3319338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 32244411 - 32244332
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcct 100  Q
    ||||||||| ||||||||||||| |  ||| |||||||||||||||||||| | | |  |||| |||||| |||||||||    
T  32244411 cacttaacataattatttaacgttatggaccaaagtgataacggaagtgcacatttaatgactactttgtctttaatcct 32244332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 357
Target Start/End: Original strand, 19147149 - 19147239
Alignment:
Q  267 ttaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||| ||||||| ||||||||||| | |||| ||||||||||  ||   |||| ||||| ||||||||| |||| || |||||||||||||    
T  19147149 ttaagaaatctataagtagaatttctgtcttgaaaatataaactgtcactttttatcaaataataattacattacttattaataaaaactt 19147239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 26170783 - 26170669
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| |||| ||||||  ||  |||||||||||||| ||||||||| | | ||  |||| ||||||||||||| | ||||||| || |     
T  26170783 catcatcacttaacaaaattttttaacagcatggactaaagtgataatggaagtgcagagtaaggaacttatttgtatttaatcttaagtcagatacttt 26170684  T
Q  115 tgtgacagcgaggtg 129  Q
    ||| ||| |||||||    
T  26170683 tgtaacaacgaggtg 26170669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 357
Target Start/End: Complemental strand, 31647841 - 31647743
Alignment:
Q  259 gacattgattaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||| |||||||  |||||| || |||||||| | ||||| |||||||||   |   |||| ||||||||||||||| |||| ||||||||||||||||    
T  31647841 gacactgattaaagaatctataaatagaatttctgtcttagaaatataaactatcactttttatcaagtaataattacattactttttaataaaaactt 31647743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 54574822 - 54574876
Alignment:
Q  52 aaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtca 106  Q
    ||||||||||| |||||||| | | ||||| || |||||||||||||||||||||    
T  54574822 aaagtgataacagaagtgcagagttagagatttatttgtatttaatcctgagtca 54574876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 2786357 - 2786273
Alignment:
Q  24 ttaacagaattatttaacgtca-gaga-ctaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtca 106  Q
    |||||| ||||||||||||||| || | ||||| |||||||||||||||| | |||  || |  |||||||||||||||||||||    
T  2786357 ttaacaaaattatttaacgtcatgataactaaaatgataacggaagtgcacattcaaggagtaatttgtatttaatcctgagtca 2786273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 30116864 - 30116772
Alignment:
Q  261 cattgattaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaa 353  Q
    ||||| ||||| |||||||||||| ||   || ||||  ||||||||| |||| ||||| || || |||| ||||||| ||||||||||||||    
T  30116864 cattggttaatgaatctaaaagtaaaaaaattgtcttggaaatataaatcgttatttttgattaactaattattatatcattttttaataaaa 30116772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 17466808 - 17466933
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | | ||    
T  17466808 catcatcacttaacagaattatttaacgtcttagactaaagtgataacggaagtgcagagtcagagacttctttgtatttaatcctgagtcagcggctta 17466907  T
Q  115 tgtgacagcgaggtgtagagtcaaga 140  Q
    ||||||||||||||| ||||||||||    
T  17466908 tgtgacagcgaggtgcagagtcaaga 17466933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 31091507 - 31091652
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || |||||||||||||||||||||||||||||||||||| | |||| ||||| |||||||||||||||||||||| ||||||    
T  31091507 catcatcacttaacatatttttttaacgtcagagactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggaccta 31091606  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||||||||| ||||| ||||||| | |  |||||||| ||||||||    
T  31091607 tgtgacagcaaggtgcagagtcagggaccaaagtgactatttgctc 31091652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 5914977 - 5915119
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    ||||||||||||||||||||||||| | || ||| ||||||||||||||||| | | || |||||||||||||||||| |||||||| |||||||| |||    
T  5914977 acacttaacagaattatttaacgtcggggattaaggtgataacggaagtgcagagttagtgacttctttgtatttaattctgagtcaaagacctatttga 5915076  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
     ||||||||| ||||||| | | ||||||||| ||||||||||    
T  5915077 aagcgaggtgcagagtcatggactaaagtgactatttgctcat 5915119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 17330210 - 17330355
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||||| | |||||||||  ||||||||||||||||||| |||| | |||||||||| |||||||||||||||||||||| ||||||    
T  17330210 catcatcacttaacagaataacttaacgtcatggactaaagtgataacggaaatgcagagtcagagacttatttgtatttaatcctgagtcagggaccta 17330309  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||||||| ||| || ||| ||||| | ||||| ||| ||||||||    
T  17330310 tgtgacagtgagctgcagaatcaaggactaaagcgactatttgctc 17330355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 32766218 - 32766367
Alignment:
Q  15 catcaacacttaacagaattattt-aacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacct 113  Q
    ||||| ||||||||||| || ||| |||||||  |||||||||||||||||||||||| | |||| ||||| |||||||||||||||||||||| |||||    
T  32766218 catcatcacttaacagattttttttaacgtcaaggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacct 32766317  T
Q  114 atgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcata 163  Q
    |||||||| ||||||| ||||||| | |  |||||||| |||||||||||    
T  32766318 atgtgacaacgaggtgcagagtcagggaccaaagtgactatttgctcata 32766367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 7073782 - 7073638
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||||| | |||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||||||||||    
T  7073782 catcatcacttaacagaataacttaacgtcagggactaaagtgataacggaagtgcagaatcagagacttatttgtatttaatcccgaatcagagaccta 7073683  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgct 159  Q
    || |||||  || || ||| | ||| | ||||||||| |||||||    
T  7073682 tgcgacagtaagctgcagaatgaaggactaaagtgactatttgct 7073638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 2910243 - 2910132
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| ||||||||||| || ||||||||| | |||||||||| |||||||||||||| ||||||| || |||    
T  2910243 catcatcacttaacagatttttttaacgtcagggactaaagtgacaaaggaagtgcagagtcagagacttatttgtatttaatcccgagtcagggatcta 2910144  T
Q  115 tgtgacagcgag 126  Q
    ||||||||||||    
T  2910143 tgtgacagcgag 2910132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 7412229 - 7412122
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| |||||||||| || || ||||||||||||||||||||||||  ||||| ||||||||| ||||||||| ||||||||||| |||||||||    
T  7412229 cacttaacataattatttaatgttagggactaaagtgataacggaagtgcactatcagtgacttctttatatttaatcttgagtcagagatctatgtgac 7412130  T
Q  121 agcgaggt 128  Q
    | ||||||    
T  7412129 aacgaggt 7412122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 33161909 - 33161790
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctat 115  Q
    |||| ||||||||| |||||||||||||||  ||||||||||||||||||||| |||| || |||||||||||| |||||||||| || ||||||||| |    
T  33161909 atcatcacttaacaaaattatttaacgtcaaggactaaagtgataacggaagtacatagtctgagacttctttgcatttaatcctaaggcagagaccttt 33161810  T
Q  116 gtgacagcgaggtgtagagt 135  Q
    |||||| |||| | ||||||    
T  33161809 gtgacaacgagctatagagt 33161790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 32765080 - 32764932
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || ||||||||||| || ||||||||||||||||||||| | |||| ||||| |||||||||||||||||||||||||||||    
T  32765080 catcatcacttaacatattt-tttaacgtcagggattaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagagaccta 32764982  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcataa 164  Q
    | ||||| | || || ||| ||| | | ||||||||| |||| |||||||    
T  32764981 tatgacaactagctgcagaatcagggactaaagtgactatttactcataa 32764932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 34582666 - 34582791
Alignment:
Q  31 aattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgt 130  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||| |||| ||||||||||||||| ||||||  ||||| ||| ||||| |||||     
T  34582666 aattatttaacgtcagggactaaagtgataacggaagtgcacattcagggactactttgtatttaatcccgagtcaatgacctttgtaacagcaaggtgc 34582765  T
Q  131 agagtcaagaattaaagtgaccattt 156  Q
    ||||||| | | ||| ||||||||||    
T  34582766 agagtcagggactaacgtgaccattt 34582791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 38853889 - 38853776
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagc 123  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||||| | | || |||| ||||||||||||||||||||||||||||| | |||||      
T  38853889 ttaacataattatttaacgtcagtgactaaattgataacggaagtgcacatttagggactactttgtatttaatcctgagtcagagacctttatgacaat 38853790  T
Q  124 gaggtgtagagtca 137  Q
    || |||||||||||    
T  38853789 gaagtgtagagtca 38853776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 5914442 - 5914307
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    ||||||||||||||||||||||||||  | ||||||||||||||| |||||| | |||  ||||||||||||||||||  |||||||||||||||| | |    
T  5914442 acacttaacagaattatttaacgtcatggtctaaagtgataacgggagtgcaaagtcactgacttctttgtatttaattgtgagtcagagacctatatca 5914343  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
    || ||||||| | |||| |||| |||| |||||||||    
T  5914342 caacgaggtgcaaagtc-agaactaaaatgaccattt 5914307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 31814324 - 31814467
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| |||||||||||||||||||| |  || |||||||||||||||||||||||| | ||| | |||||||| |||||||| ||||||||||||||      
T  31814324 catcatcacttaacagaattatttaatgctagggactaaagtgataacggaagtgcagagtcaaaaacttctttatatttaattctgagtcagagacc-- 31814421  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    | | ||||||||||| ||||| ||  | ||||||||| ||||||||    
T  31814422 tttaacagcgaggtgcagagtaaatgactaaagtgactatttgctc 31814467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 31090301 - 31090196
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| | || ||||||||||| ||||||| | |||||||||||||| | |||||||||| ||| |||||||||||||||||  ||||||||||||    
T  31090301 cacttaacatatttttttaacgtcagggactaaaatcataacggaagtgcagagtcagagacttatttatatttaatcctgagtcaaggacctatgtgac 31090202  T
Q  121 agcgag 126  Q
    ||||||    
T  31090201 agcgag 31090196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 137
Target Start/End: Original strand, 24459432 - 24459548
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| | || ||||| ||||| ||||||||||||||  ||||||||   |||||||||| ||||||||||||||||| |||| ||||||||||||    
T  24459432 cacttaacatatttttttaatgtcagggactaaagtgataatagaagtgcagggtcagagacttatttgtatttaatcctgattcagggacctatgtgac 24459531  T
Q  121 agcgaggtgtagagtca 137  Q
    |||||| || |||||||    
T  24459532 agcgagatgcagagtca 24459548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 40000315 - 40000461
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctat 115  Q
    |||| ||||||||||| ||  |||||||||| || |||||||||||||||||||||   | |||||||| ||||||||||||||| | |||| || ||||    
T  40000315 atcatcacttaacagattttcttaacgtcagggaataaagtgataacggaagtgcagggttagagacttatttgtatttaatcctcaatcagggatctat 40000414  T
Q  116 gtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    || ||||||||||| ||||||| | |  |||||||| ||||| ||||    
T  40000415 gtaacagcgaggtgcagagtcagggaccaaagtgacaatttgttcat 40000461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 14704148 - 14704048
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || ||||||||||| |||||||||||||||||||||||| | | || ||||| |||||||||||||||||||||| ||||||    
T  14704148 catcatcacttaacatattt-tttaacgtcagggactaaagtgataacggaagtgcagagtgagggacttatttgtatttaatcctgagtcagggaccta 14704050  T
Q  115 tg 116  Q
    ||    
T  14704049 tg 14704048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 39016364 - 39016513
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtc--agagacct 113  Q
    |||| ||||||||| | || ||||||||||||||||||||||||||||||||||||     || ||||| ||||||||||||||||||||  |||||  |    
T  39016364 atcatcacttaacatatttttttaacgtcagagactaaagtgataacggaagtgca----gagtgacttatttgtatttaatcctgagtcagagagatgt 39016459  T
Q  114 atgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcataaata 167  Q
    ||||||||||||| || ||| |||   | ||||||||| ||||||||| |||||    
T  39016460 atgtgacagcgagctgcagaatcagagactaaagtgactatttgctcaaaaata 39016513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 11985832 - 11985712
Alignment:
Q  17 tcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatg 116  Q
    |||||| |||||||||   |||||||| || ||||||| |||||||| || ||||   ||||||||| ||||||||||||||||||||||||||||| |     
T  11985832 tcaacagttaacagaagcttttaacgttagggactaaactgataacgaaaatgcaccttcagagactactttgtatttaatcctgagtcagagaccttta 11985733  T
Q  117 tgacagcgaggtgtagagtca 137  Q
    | |||||||||||| ||||||    
T  11985732 taacagcgaggtgtggagtca 11985712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 12746195 - 12746327
Alignment:
Q  29 agaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggt 128  Q
    ||||||||||||| | |  |||||||||||||||||||| ||| | ||||  ||| |||||||||||||||||||||||  |||| |  ||| |||||||    
T  12746195 agaattatttaacattatggactaaagtgataacggaagggcacattcaggaactactttgtatttaatcctgagtcaggaacctttaagactgcgaggt 12746294  T
Q  129 gtagagtcaagaattaaagtgaccatttgctca 161  Q
    | |||||||||||  ||||||||||||| ||||    
T  12746295 gcagagtcaagaaccaaagtgaccatttactca 12746327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 24458197 - 24458057
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||| ||| || |||||||| ||||||||||||||||||| ||||| | | ||||| |||| ||||||||||||  |||||||| |||||||||||     
T  24458197 cacttaatagatttttttaacgttagagactaaagtgataacgaaagtgtagagtcagaaacttatttgtatttaattttgagtcagggacctatgtgat 24458098  T
Q  121 agcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    |||||| || | | ||| | | ||||||||| |||||||||    
T  24458097 agcgagctgcataatcagggactaaagtgactatttgctca 24458057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 160
Target Start/End: Original strand, 33163444 - 33163584
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagac-ttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    ||||| ||| ||||| | |||||||||||||||||||||||||||| |||||| ||| | || || ||||||||||||  ||||||||||| || || ||    
T  33163444 cacttcacaaaattaatcaacgtcagagactaaagtgataacggaaatgcatagtcaaatactttttttgtatttaattatgagtcagagaactttgcga 33163543  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    || || |||||||||||||  | |||||||| |||||||||    
T  33163544 caacgtggtgtagagtcaaagactaaagtgatcatttgctc 33163584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 151
Target Start/End: Original strand, 34037653 - 34037789
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| |||| ||||||| | |  |||||||||||||| |||||||| | ||| |||||| ||||||||||||||||||| |  |||||     
T  34037653 catcatcacttaacataattttttaacggcgggaactaaagtgataacagaagtgcagagtcatagacttatttgtatttaatcctgagttatggacctt 34037752  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgac 151  Q
    | ||||||| ||||| ||||||||| | |||||||||    
T  34037753 tatgacagcaaggtgcagagtcaaggactaaagtgac 34037789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 17466184 - 17466093
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtca 106  Q
    ||||| ||||||||| |||| ||| ||||||| ||||||||||| |||||||||||| | |||||||  |||||||||||||||||||||||    
T  17466184 catcatcacttaacataattgtttcacgtcagggactaaagtgaaaacggaagtgcagagtcagagatatctttgtatttaatcctgagtca 17466093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 26586285 - 26586368
Alignment:
Q  25 taacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcaga 108  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||| | ||| ||||| |||| ||||||||| |||||||||    
T  26586285 taacataattatttaacgccagagactaaagtgataacggaagtgcacattcaaagactactttatatttaatcttgagtcaga 26586368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 38984968 - 38985083
Alignment:
Q  15 catcaacacttaacagaatt-atttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacct 113  Q
    ||||||||||||||| |||| ||||||||| || |||||||||||||||||||||||| | |||  |||||||||||||||||| | |||||| | | ||    
T  38984968 catcaacacttaacataatttatttaacgttagtgactaaagtgataacggaagtgcagagtcaaggacttctttgtatttaattccgagtcataaatct 38985067  T
Q  114 atgtgacagcgaggtg 129  Q
     |||||||| ||||||    
T  38985068 ttgtgacagtgaggtg 38985083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 38856359 - 38856487
Alignment:
Q  27 acagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgag 126  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||| ||||  ||| |||| ||||||||| |||||| |||| || ||||||| ||||    
T  38856359 acagaattatttaacgtcagagattaaagtgataacaaaagtgcatactcaggaactactttatatttaatcatgagtctgaga-ctttgtgacaacgag 38856457  T
Q  127 gtgtagagtcaagaattaaagtgaccattt 156  Q
    ||  | | || || ||||||||||||||||    
T  38856458 gtacaaaatctaggattaaagtgaccattt 38856487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 383
Target Start/End: Original strand, 37913021 - 37913122
Alignment:
Q  283 tagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaacttgctt-ttttgatatttaaccaatac 381  Q
    ||||||||||||||| |||||||||| |||   |||| ||||||||||||| | |||| |||||||||||||||| ||| |||||||  |||||||||||    
T  37913021 tagaatttttatcttgaaaatataaaccgtcactttttatcaagtaataatcacattaatttttaataaaaacttacttcttttgatgcttaaccaatac 37913120  T
Q  382 cc 383  Q
    ||    
T  37913121 cc 37913122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 38854923 - 38854810
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagc 123  Q
    |||||| ||||||||||| |||| ||||||| |||||||  ||||||| | | ||  ||| |||||||||||||||||||||| |||||| | ||||| |    
T  38854923 ttaacataattatttaacttcagtgactaaattgataacataagtgcacatttaggaactactttgtatttaatcctgagtcaaagacctttatgacaac 38854824  T
Q  124 gaggtgtagagtca 137  Q
    || |||||||||||    
T  38854823 gaagtgtagagtca 38854810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 39257007 - 39257106
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| ||||||||||||| | ||||||||||||  ||||||||||| ||    ||||||||||||||  ||| ||||||||||||||||||||||    
T  39257007 cacttaacataattatttaacgttaaagactaaagtga--acggaagtgcacaa----agacttctttgtatcaaatactgagtcagagacctatgtgac 39257100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 39015148 - 39015026
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| |  | |||||||| ||| |||||| |||||| | ||||||| | ||| |||| | |||||||||||||||||||||  || |||    
T  39015148 catcatcacttaacaaatatttttaacgttagaaactaaaatgataatgaaagtgcagagtcaaagacgtatttgtatttaatcctgagtcaaggatcta 39015049  T
Q  115 tgtgacagcgaggtgtagagtca 137  Q
    |||| |||||||||| |||||||    
T  39015048 tgtggcagcgaggtgcagagtca 39015026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 28864778 - 28864870
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtg 129  Q
    |||||| |||||||||||| |||||||  ||||||||| ||||||||| |||||||||||||  ||| |||| ||| | |||||||||||||||    
T  28864778 tttaacatcagagactaaaatgataacaaaagtgcatattcagagactactttgtatttaatattgaatcag-gacttttgtgacagcgaggtg 28864870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 15441951 - 15442063
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| || |||||| |||||||||||   |||||||||||||||||   ||||||| | |||  |||| |||||||||||||||||||||||  | ||     
T  15441951 catcatcagttaacaaaattatttaacactagagactaaagtgataataaaagtgcacattcaaggactactttgtatttaatcctgagtcaggaatctt 15442050  T
Q  115 tgtgacagcgagg 127  Q
    |||||||||||||    
T  15442051 tgtgacagcgagg 15442063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 21733751 - 21733834
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatc 98  Q
    ||||| |||||||||||||| ||||||  ||   ||||||||||| ||||||||||| | |||||||||| |||||||||||||    
T  21733751 catcatcacttaacagaattttttaactgcaacaactaaagtgatgacggaagtgcagagtcagagacttatttgtatttaatc 21733834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 2911468 - 2911582
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagacta----aagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagac 111  Q
    |||| ||||||||||| || ||||||||||| |||||    ||||||||||||||||||| | |||||||||| ||| |||||||   |||||||  | |    
T  2911468 atcatcacttaacagatttttttaacgtcagggactaactaaagtgataacggaagtgcaaagtcagagacttatttatatttaactttgagtcatggcc 2911567  T
Q  112 ctatgtgacagcgag 126  Q
     ||||||||||||||    
T  2911568 ttatgtgacagcgag 2911582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 9616024 - 9616156
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagc 123  Q
    ||||||||| | ||||||||| ||||||||| |||||||| ||||||  | |||| |||| |||||||||||||  ||||| ||  |||| | | |||||    
T  9616024 ttaacagaaatttttaacgtcggagactaaattgataacgaaagtgcgcattcagggactactttgtatttaattatgagttaggaacctttataacagc 9616123  T
Q  124 gaggtgtagagtcaagaattaaagtgaccattt 156  Q
      |||||||||||||| |  |||||||| ||||    
T  9616124 agggtgtagagtcaaggaccaaagtgactattt 9616156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 37607236 - 37607156
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagt 104  Q
    |||||| |||||| ||||||||| |||||||||||||||||||||||| | | |  |||| | |||||||||||| |||||    
T  37607236 ttaacataattatataacgtcagggactaaagtgataacggaagtgcacattaaaggactaccttgtatttaatcatgagt 37607156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 43380689 - 43380617
Alignment:
Q  49 actaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgaca 121  Q
    ||||||||||||||  ||  ||| | |||||||||||| ||||||||||| |||||||||||||| |||||||    
T  43380689 actaaagtgataacataaacgcacagtcagagacttctatgtatttaatcatgagtcagagacctttgtgaca 43380617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 8420123 - 8420009
Alignment:
Q  48 gactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaag 147  Q
    ||||||| ||||||| |||||||| | |||| |||| |||||||||||||| ||| |||| ||| | |||||| ||||  || ||||||| | |  ||||    
T  8420123 gactaaactgataacagaagtgcacattcagggactactttgtatttaatcttgactcagggacatttgtgaccgcgaaatgcagagtcagggaccaaag 8420024  T
Q  148 tgaccatttgctcat 162  Q
    ||||||||| |||||    
T  8420023 tgaccatttactcat 8420009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 14887478 - 14887598
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| || |||||| ||||||||||||  ||||| ||||||||  | |||| |||| | |||| |  | |||| | |||||||||||||||| |||||     
T  14887478 catcatcagttaacaaaattatttaacgctagagattaaagtgacgatggaattgcacattcagggtatactttatgtttaatcctgagtcagggacctt 14887577  T
Q  115 tgtgacagcgaggtgtagagt 135  Q
     |||||||||||||| |||||    
T  14887578 cgtgacagcgaggtgcagagt 14887598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 18675218 - 18675122
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    |||||| |||||||| ||| || ||||||||||||||| ||||||||| |  ||  ||||  ||| |||||||| ||||||||  ||||||||||||    
T  18675218 ttaacaaaattatttgacgccaaagactaaagtgataatggaagtgcacatccaaggactattttatatttaattctgagtcaatgacctatgtgac 18675122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 31904246 - 31904310
Alignment:
Q  289 ttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaa 353  Q
    ||||||||||||||||||||| ||| ||||| |||||||||| |||| |  ||||||| ||||||    
T  31904246 ttttatcttaaaaatataaaatgttatttttaatcaagtaatgattacacaattttttcataaaa 31904310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 8420961 - 8421008
Alignment:
Q  75 tcagagacttctttgtatttaatcctgagtcagagacctatgtgacag 122  Q
    ||||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  8420961 tcagagactactttgtatttaatcctgagtcaatgacctttgtgacag 8421008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 12396140 - 12396061
Alignment:
Q  59 taacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaa 138  Q
    |||||||||| || ||| ||| ||||| || ||||||||||||| |||  ||||||||| | ||||||||| ||||||||    
T  12396140 taacggaagtacacaataagaaacttccttatatttaatcctgattcatggacctatgtaagagcgaggtgcagagtcaa 12396061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 26585221 - 26585072
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagag---acttctttgtatttaatcctgagtcagagac 111  Q
    ||||| || |||||| ||||||||||||  |||||||||||||||||| |||||| | |  ||  |   |||| ||| ||| ||||| |||||||| |||    
T  26585221 catcatcaattaacataattatttaacgctagagactaaagtgataacagaagtgtacatccaatgactacttttttttatctaatcttgagtcagggac 26585122  T
Q  112 ctatgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    || |||| ||||||| || ||| ||| |||  ||||||||||||| ||||    
T  26585121 ctttgtggcagcgagatgcagattcatgaaccaaagtgaccatttactca 26585072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 23788407 - 23788521
Alignment:
Q  267 ttaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaacttgcttttttg 366  Q
    |||| ||||||| || |||||||| ||| || ||||||||||   |  ||||| || |||||||||||| |||| ||||||||||||| ||  |||||||    
T  23788407 ttaaaaaatctataaatagaatttatattttgaaaatataaattatcattttttattaagtaataattacattactttttaataaaaatttatttttttg 23788506  T
Q  367 atatttaaccaatac 381  Q
     | ||||| ||||||    
T  23788507 gtgtttaatcaatac 23788521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 38854672 - 38854718
Alignment:
Q  27 acagaattatttaacgtcagagactaaagtgataacggaagtgcata 73  Q
    |||||||||||||||||||| || ||||||||||||  |||||||||    
T  38854672 acagaattatttaacgtcagggattaaagtgataacaaaagtgcata 38854718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 6e-41; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 47075336 - 47075477
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| | | |||| |  |||||||||||||||| ||||| |  |||||||||||    
T  47075336 acacttaacaaaattatttaacgtcagagactaaagtgataacggaagtgtagagtcaggggtttctttgtatttaatcttgagtgacggacctatgtga 47075435  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    || ||||||| ||||||||| |||||||||||||||||||||    
T  47075436 caacgaggtgcagagtcaaggattaaagtgaccatttgctca 47075477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 47118036 - 47118178
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||| | ||| ||| |||    
T  47118036 acacttaacaaaattatttaacgtcagggactaaagtgataacgaaagtgcagagtcagagacttctttgcatttaatcctgagtcggggacttatatga 47118135  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    || ||||||| ||||||| | | ||||||||||||||||||||    
T  47118136 caacgaggtgcagagtcagggactaaagtgaccatttgctcat 47118178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 19114667 - 19114530
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagc 123  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| | | || ||||||||||||||||||| |||||||| ||||| ||||||| |    
T  19114667 ttaacagaattatttaacgtaagagactaaagtgataacggaagtgcaaagttagtgacttctttgtatttaatcttgagtcagggacctctgtgacaac 19114568  T
Q  124 gaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    || ||| ||||||| | | |||||||| ||||||||||    
T  19114567 gaagtgcagagtcagggactaaagtgatcatttgctca 19114530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 45600924 - 45601063
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||| | |||| ||||||||||||||||||||||| |||| |||||||||||    
T  45600924 acacttaacagaattatttaacgtcgtggactaaagtgataacggaagtgcagagtcag-gacttctttgtatttaatcctgaatcagggacctatgtga 45601022  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||||||||   ||||||| | | ||||||||| ||||||||    
T  45601023 cagcgagggacagagtcagggactaaagtgacgatttgctc 45601063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 36279095 - 36278950
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||| |||||| ||||||||||| ||||||| |||||||||||||||| | |||||||||| ||||||||||||||||| |||| ||||||    
T  36279095 catcatcacttaaaagaattttttaacgtcagggactaaaatgataacggaagtgcagagtcagagacttatttgtatttaatcctgaatcagggaccta 36278996  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||||||| |||| |||| | ||| | | ||||||||| ||||||||    
T  36278995 tgtgacaacgagctgtataatcagggactaaagtgactatttgctc 36278950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 17700640 - 17700516
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    ||||||||||| |||||||||||||||||||||||| | |||| ||||| ||||||||||||||||||||||  |||||||||||| ||||||| |||||    
T  17700640 tttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcaggaacctatgtgacaacgaggtgcagagt 17700541  T
Q  136 caagaattaaagtgaccatttgctc 160  Q
    |||  | ||||||||| ||||||||    
T  17700540 caaagactaaagtgactatttgctc 17700516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 19115132 - 19115271
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||||||||||||||||||| || ||||||||| | |||||||||||| | |||  ||||||||||||||||||||||||| |  |||||||||||    
T  19115132 acacttaacagaattatttaacgttagggactaaagtaaaaacggaagtgcagagtcat-gacttctttgtatttaatcctgagtgaaggacctatgtga 19115230  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    || ||||||| ||||||| ||| ||||||||| ||||||||    
T  19115231 catcgaggtgcagagtcacgaactaaagtgactatttgctc 19115271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 55388216 - 55388069
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || ||||||||||| ||||||||||||||||| |||||| | ||||  |||| |||||||||||||||||||||||||||||    
T  55388216 catcatcacttaacaaatttttttaacgtcagggactaaagtgataacgggagtgcagagtcagtaacttatttgtatttaatcctgagtcagagaccta 55388117  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    | |||||||||| || ||| ||| | | ||||||||| ||||||||||    
T  55388116 tatgacagcgagctgcagaatcagggactaaagtgactatttgctcat 55388069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 2591769 - 2591625
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctat 115  Q
    |||| ||||||||||||| | ||||| |||| |||||||||||| | ||||||||| | |||||||||| |||||||||||||||||||||| |||||||    
T  2591769 atcatcacttaacagaataacttaacatcagggactaaagtgatcatggaagtgcagagtcagagacttgtttgtatttaatcctgagtcagggacctat 2591670  T
Q  116 gtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||||||| || || ||| ||| | | ||||||||| ||||||||    
T  2591669 gtgacagcaagctgcagaatcagggactaaagtgactatttgctc 2591625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 36280297 - 36280401
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || ||||||||||| |||||||||||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||||    
T  36280297 catcatcacttaacatatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttatttatatttaatcctgagtcagagaccta 36280396  T
Q  115 tgtga 119  Q
    |||||    
T  36280397 tgtga 36280401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 33428420 - 33428565
Alignment:
Q  20 acacttaacagaattatttaacgtcagag-actaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtg 118  Q
    |||||||||| |||||||||||| | ||| |||||||||| ||||||| |||| | |||  |||||||||||||||||| ||||||||| ||||||||||    
T  33428420 acacttaacataattatttaacg-ctgaggactaaagtgacaacggaaatgcagagtcaaggacttctttgtatttaattctgagtcagggacctatgtg 33428518  T
Q  119 acagcgaggtgtagagtcaagaattaaagtgaccatttgctcataaa 165  Q
    ||| ||||||| ||||||| | |  ||||||||||||||||||||||    
T  33428519 acaacgaggtgcagagtcagggacgaaagtgaccatttgctcataaa 33428565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 48573120 - 48572984
Alignment:
Q  23 cttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacag 122  Q
    ||||||| | || ||||||||||  |||||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||| ||||||||||| |     
T  48573120 cttaacaaatttttttaacgtcaaggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcagggacctatgtgataa 48573021  T
Q  123 cgaggtgtagagtcaagaattaaagtgaccatttgct 159  Q
    ||||||| ||||||| | |  |||||||| |||||||    
T  48573020 cgaggtgcagagtcagggaccaaagtgactatttgct 48572984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 52318296 - 52318444
Alignment:
Q  14 tcatcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacct 113  Q
    |||||| ||||||||||| || ||||||||||| ||||||||| ||| | |||||||| | |||| ||||| |||||||||||||||||||||| || ||    
T  52318296 tcatcatcacttaacagatttttttaacgtcagggactaaagtaatatcagaagtgcagagtcagggacttatttgtatttaatcctgagtcagggatct 52318395  T
Q  114 atgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    |||||||||||| ||| |||||||   |  |||||||| ||||||||||    
T  52318396 atgtgacagcgaagtgcagagtcagagaccaaagtgactatttgctcat 52318444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 20464212 - 20464069
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| ||||||||||||   ||||||||||||||| |||||||| | |||| ||||||||||||||||||| |||| ||| |||||     
T  20464212 catcatcacttaacagagttatttaacgtcgtggactaaagtgataacagaagtgcagagtcagggacttctttgtatttaatcatgagccagggacctt 20464113  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgc 158  Q
    ||||||| ||||||| ||||||  | | ||||||| ||||||||    
T  20464112 tgtgacaacgaggtgcagagtcggggactaaagtgtccatttgc 20464069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 53959080 - 53959187
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || |||||||||||||||||||||||||||||||||||| | |||   |||| ||||||||||||| |||||||||||||||    
T  53959080 catcatcacttaacaaatttttttaacgtcagagactaaagtgataacggaagtgcagagtcatgaacttatttgtatttaatcatgagtcagagaccta 53959179  T
Q  115 tgtgacag 122  Q
    ||||||||    
T  53959180 tgtgacag 53959187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 11773053 - 11773142
Alignment:
Q  37 ttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgag 126  Q
    |||||| ||| |||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  11773053 ttaacgccagggactaaagtgataacggaagtgtagagtcagagacttatttgtatttaatcctgagtcagggacctatgtgacagcgag 11773142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 3671181 - 3671036
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| |||| ||||||| ||| || ||||||||||||||||||| | | ||| |||||| |||||||||||| |||||||||||||||     
T  3671181 catcatcacttaacataattttttaacggcagggattaaagtgataacggaagtggagagtcatagacttatttgtatttaattctgagtcagagacctt 3671082  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    ||||| || |||||| | ||||||| | ||||||||| || ||||||    
T  3671081 tgtgatagagaggtgcaaagtcaagga-taaagtgactatatgctca 3671036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 17701920 - 17702010
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgag 126  Q
    ||||||||||| |||||||||||||||||||||||| | |||| ||||| ||||||||||||| |||||||| ||||||| ||||||||||    
T  17701920 tttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggacctatatgacagcgag 17702010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 49261522 - 49261620
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||| |||| | | |||||   ||||||||||||||||||||||| |||||||||||    
T  49261522 acacttaatagaataaattaacgtcagagactaaagtgataacggaaatgcagagttagaga---ctttgtatttaatcctgagtcagggacctatgtga 49261618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 50753960 - 50753841
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||| |||||| | | ||||| |||| ||| ||||||||||||| | || ||||||    
T  50753960 catcatcacttaacagatttttttaacggcagggactaaagtgataacagaagtgtagagtcagaaacttgtttatatttaatcctgaattagggaccta 50753861  T
Q  115 tgtgacagcgaggtgtagag 134  Q
    ||||||||||||||| ||||    
T  50753860 tgtgacagcgaggtgcagag 50753841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 52317122 - 52317011
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||  ||||||| |||||||||| ||||| | | | |||||| ||||||||||||| |||||||||||||||    
T  52317122 catcatcacttaacagatttttttaacgtcatggactaaaatgataacggaggtgcagagttaaagacttatttgtatttaatcatgagtcagagaccta 52317023  T
Q  115 tgtgacagcgag 126  Q
    | ||||||||||    
T  52317022 tatgacagcgag 52317011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 47428548 - 47428682
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||||| ||||||||||||| | ||||| ||||||||||||||||||| | |||  ||||||      ||||||| |||||||  |||||||||||    
T  47428548 acacttaacataattatttaacgttatagactgaagtgataacggaagtgcagagtcaatgacttc------tttaatcttgagtcacggacctatgtga 47428641  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||| |||||| | ||||| | ||||||||||||||||||||    
T  47428642 cagagaggtgcaaagtcagggattaaagtgaccatttgctc 47428682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 162
Target Start/End: Original strand, 2592014 - 2592134
Alignment:
Q  42 gtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaa 141  Q
    ||||| |||||||||||||||||||||    | |||| ||||| |||||||||||||||||||||| |||||||||||||||||| || ||| | | | |    
T  2592014 gtcagggactaaagtgataacggaagtattgagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgagctgcagaattaggga 2592113  T
Q  142 ttaaagtgaccatttgctcat 162  Q
     ||||||||| ||||||||||    
T  2592114 ctaaagtgactatttgctcat 2592134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 36827455 - 36827546
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtca 106  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| | | ||||||| |  ||| |||||||||||||||||    
T  36827455 catcatcacttaacaaaattatttaacatcagagactaaagtgataacggaagtgtacattcagagattattttatatttaatcctgagtca 36827546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 34263940 - 34263826
Alignment:
Q  23 cttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacag 122  Q
    ||||||| | || ||||| ||||| || ||||||||||| ||||||| | | |||||||||| ||||||||||||||||| |||  ||||| ||||||||    
T  34263940 cttaacatatttttttaatgtcagggattaaagtgataatggaagtgtagagtcagagacttatttgtatttaatcctgaatcaaggacctctgtgacag 34263841  T
Q  123 cgaggtgtagagtca 137  Q
    ||||||| |||||||    
T  34263840 cgaggtgcagagtca 34263826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 48574439 - 48574538
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| || |||| ||| || ||||||||||  |||||||||||||||| ||||||| | |||| ||||| |||||||||||||||||||||| ||||||    
T  48574439 catcatcatttaaaagatttttttaacgtcaaggactaaagtgataacgaaagtgcagagtcagggacttatttgtatttaatcctgagtcagggaccta 48574538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 48808512 - 48808398
Alignment:
Q  12 catcatcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagac 111  Q
    |||||| | ||||||||| | || |||||| || | ||||||||||| |||||||||||| | | ||  |||| ||||||||||||||||||||||||||    
T  48808512 catcataatcacttaacatatttttttaacatccgggactaaagtgacaacggaagtgcagagttaggaacttatttgtatttaatcctgagtcagagac 48808413  T
Q  112 ctatgtgacagcgag 126  Q
    |||| | ||||||||    
T  48808412 ctatctaacagcgag 48808398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 47427993 - 47427889
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||||| |||||||||||||||||     || || ||||| ||||||| | |||| ||||||||||||||||||  |||||||  |||||||||||    
T  47427993 acacttaacataattatttaacgtcaga-----aaatgctaacgtaagtgcacagtcagggacttctttgtatttaattttgagtcaaggacctatgtga 47427899  T
Q  120 cagcgaggtg 129  Q
    ||||||||||    
T  47427898 cagcgaggtg 47427889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 53957816 - 53957673
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| ||  ||| || ||| ||||||||| | ||| |||||| |||||||||| |||||||||||  |||||    
T  53957816 catcatcacttaacagatttttttaacgtcagggaa-aaattgttaagggaagtgcagagtcatagacttatttgtattta-tcctgagtcaggaaccta 53957719  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||| |||||||| || ||| ||||| | ||||||||| ||||||||    
T  53957718 tgtaacagcgagttgcagaatcaagtactaaagtgactatttgctc 53957673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 40206016 - 40205913
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtc-agagacctatgtgacag 122  Q
    |||||| |||| ||||||| ||  ||||||| |||||||||||||||| | ||||||||| |||||| ||||||| |||||| |||||||| | ||||||    
T  40206016 ttaacataattttttaacgccaatgactaaactgataacggaagtgcacattcagagactactttgtttttaatcgtgagtcaagagacctttatgacag 40205917  T
Q  123 cgag 126  Q
    ||||    
T  40205916 cgag 40205913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 55389482 - 55389569
Alignment:
Q  48 gactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    |||||||||||||||||||||| | | |||| |||||  |||||||||||  |||||||  ||||||||||||||||||||| |||||    
T  55389482 gactaaagtgataacggaagtgtagagtcagggacttaattgtatttaattttgagtcaatgacctatgtgacagcgaggtgcagagt 55389569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 33427889 - 33427749
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||||| |||||||||| || ||| ||||||||||||||| ||||||| | |||| |  |  ||||||||||||||||| |||  |||||||||||    
T  33427889 acacttaacataattatttaatgttagatactaaagtgataacgaaagtgcagagtcag-ggttaatttgtatttaatcctgaatcaaggacctatgtga 33427791  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
     |  || ||| | | || |||||||||||||||||||||||||    
T  33427790 taaggaagtgcaaaatc-agaattaaagtgaccatttgctcat 33427749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 19331180 - 19331129
Alignment:
Q  86 tttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtca 137  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| |||||||    
T  19331180 tttgtatttaatcctgagtcagggacctatgtgacagcaaggtgcagagtca 19331129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 357
Target Start/End: Complemental strand, 49711050 - 49710967
Alignment:
Q  273 aatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||||| || |||||||| | ||||| |||||||||| ||| ||||| || || |||||||||||||| ||||||||||||||||    
T  49711050 aatctataaatagaatttctgtcttagaaatataaaatgttattttttataaa-taataattatattaatttttaataaaaactt 49710967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 6785811 - 6785916
Alignment:
Q  283 tagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattata-ttattttttaataaaaacttgct--tttttgatatttaaccaat 379  Q
    |||||||||| |||| ||||||||||| |||  |||| |||||||||| |||| |  | |||||| || ||||||||||  |||||||| ||||||||||    
T  6785811 tagaatttttgtcttgaaaatataaaatgttacttttgatcaagtaatgattacacatcttttttcatgaaaacttgcttgtttttgatgtttaaccaat 6785910  T
Q  380 accctt 385  Q
    ||||||    
T  6785911 accctt 6785916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 29188370 - 29188455
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcct 100  Q
    |||||||| |||||| |||||||||| ||||   ||||||||||||| | ||||||||| |||  |||| ||||||| ||||||||    
T  29188370 catcaacagttaacaaaattatttaatgtcatgaactaaagtgataatgaaagtgcatattcaatgactactttgtaattaatcct 29188455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 357
Target Start/End: Original strand, 32720579 - 32720612
Alignment:
Q  324 aagtaataattatattattttttaataaaaactt 357  Q
    ||||||||||||||||||||||||||||||||||    
T  32720579 aagtaataattatattattttttaataaaaactt 32720612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 20464511 - 20464582
Alignment:
Q  85 ctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
    |||||||||||||  ||||||| | |||| ||||||||| ||||| ||||||||| | ||||||||| ||||    
T  20464511 ctttgtatttaattatgagtcaaaaacctttgtgacagcaaggtgcagagtcaaggactaaagtgactattt 20464582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 612357 - 612275
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaat 97  Q
    ||||| ||||||||| |||||||||| || ||  ||||||||||||||  |||| || | |||  ||||||||||||||||||    
T  612357 catcatcacttaacataattatttaatgtgaggaactaaagtgataacataagtacacattcacggacttctttgtatttaat 612275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 15671167 - 15671208
Alignment:
Q  316 ttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||| ||||||||||||||| |||| ||||||||||||||||    
T  15671167 tttttatcaagtaataattacattactttttaataaaaactt 15671208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 357
Target Start/End: Complemental strand, 27144054 - 27144021
Alignment:
Q  324 aagtaataattatattattttttaataaaaactt 357  Q
    |||||||||||| |||||||||||||||||||||    
T  27144054 aagtaataattacattattttttaataaaaactt 27144021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 39497329 - 39497244
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgaca 121  Q
    ||||||| |||||| |||| |||||||| ||||||| | |||   |||  |||||||||||||||||||||  ||||| |||||||    
T  39497329 tttaacgacagagattaaactgataacgaaagtgcacattcaataactattttgtatttaatcctgagtcatggacctttgtgaca 39497244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 43024155 - 43024103
Alignment:
Q  283 tagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataatta 335  Q
    ||||||||  ||||||| |||||||| |||  |||||||||||||||||||||    
T  43024155 tagaatttcaatcttaagaatataaaccgtcatttttcatcaagtaataatta 43024103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 48809635 - 48809690
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgca 71  Q
    ||||| ||||||||||| || |||| |||||  ||||||||||||||||||||||||    
T  48809635 catcatcacttaacagattttttta-cgtcatggactaaagtgataacggaagtgca 48809690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 31219145 - 31219281
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||   | ||||  |||||||||||||||||||||||| |  |||||||||||    
T  31219145 acacttaagagaattatttaacgtcagagactaaagtgataacggaagtgtcgagtcaggaacttctttgtatttaatcctgagttaatgacctatgtga 31219244  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
    |||||||||| ||||||| | ||||||||||||||||    
T  31219245 cagcgaggtgcagagtcagggattaaagtgaccattt 31219281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 31219093 - 31218952
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||| ||||||||||||| |||| || ||||||||||||||||||||| | ||||  |||||||||||||||||||||||| |  |||||||||||    
T  31219093 acacttaagagaattatttaacatcagggattaaagtgataacggaagtgcagagtcaggaacttctttgtatttaatcctgagttaaggacctatgtga 31218994  T
Q  120 cagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    |||||||||| |||||||   |||||||||||||||||||||    
T  31218993 cagcgaggtgcagagtcagagattaaagtgaccatttgctca 31218952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 30748142 - 30747995
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||| ||  || ||||||| ||| |||||||||||||||| ||||| | | |||||||||| ||||||||||||||| |||||| ||||||    
T  30748142 catcatcacttaatagttttttttaacggcagcgactaaagtgataacgaaagtgtagagtcagagacttgtttgtatttaatcctaagtcagggaccta 30748043  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    ||||||||||||||| ||| ||| | | ||||||||| ||||||||||    
T  30748042 tgtgacagcgaggtgcagaatcagggactaaagtgactatttgctcat 30747995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 23508085 - 23507972
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| ||  |||||||| ||| |||||||||||||| ||||||| | | ||| ||| || ||||||||||||||||| ||||  |||||||||||    
T  23508085 cacttaacaaaaaaatttaacgacagggactaaagtgataaaggaagtgtaaagtcatagatttgtttgtatttaatcctgaatcaggaacctatgtgac 23507986  T
Q  121 agcgaggtgtagag 134  Q
    || |||||||||||    
T  23507985 agggaggtgtagag 23507972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 12676479 - 12676572
Alignment:
Q  44 cagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtca 137  Q
    ||||||||||| |||||||  ||||||| | | ||||||| ||||||||||||||||||| ||||||||  ||||||| ||||||| |||||||    
T  12676479 cagagactaaactgataacaaaagtgcacatttagagactactttgtatttaatcctgagacagagaccattgtgacaacgaggtgcagagtca 12676572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 24940541 - 24940397
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| ||||||||||||  ||| ||||||||||| | ||||||||| | ||||| |||  ||||  ||||||  |||||||  |||||     
T  24940541 catcatcacttaacataattatttaacgctagaaactaaagtgatgaaggaagtgcagagtcagatactattttg--tttaattatgagtca-tgacctt 24940445  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    ||||||| ||||||| ||||||||| | ||||||||| ||||||||||    
T  24940444 tgtgacaacgaggtgcagagtcaagtactaaagtgacaatttgctcat 24940397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 10855943 - 10855837
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| |||||||||||||||| |||||||| ||||||  ||||| |   ||||  |||||||||||||||||||||||||| |||||| ||| ||    
T  10855943 cacttaacataattatttaacgtcagggactaaagcgataacaaaagtgtacggtcagt-acttctttgtatttaatcctgagtcaaagacctttgtaac 10855845  T
Q  121 agcgaggt 128  Q
    ||| ||||    
T  10855844 agcaaggt 10855837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 29845602 - 29845483
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    ||||||| ||||||||||| ||||||| ||||||||   | || |||| ||||||||||| ||| |||| |||||| | ||||||||||||||   ||||    
T  29845602 tttaacgccagagactaaactgataacagaagtgcacgtttag-gactactttgtatttattcccgagttagagacttttgtgacagcgaggttctgagt 29845504  T
Q  136 caagaattaaagtgaccattt 156  Q
    |||| ||||||||||| ||||    
T  29845503 caaggattaaagtgactattt 29845483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 33987097 - 33987243
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| || |||| || |||||||||||| |||||||||| ||| |||  ||||  ||| |||  |||| |||||||||||||||| ||||| ||||||     
T  33987097 catcatcagttaagaggattatttaacgttagagactaaaatgacaacaaaagtttatattcatggactactttgtatttaatcctaagtcaaagacctc 33987196  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    | |||||||||| || ||||| | |||| ||| |||| |||| ||||    
T  33987197 tatgacagcgagttgcagagtaaggaatcaaattgactatttactca 33987243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 5265320 - 5265201
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    ||||||||||| ||||||| |||||||||||||||| | ||| || ||  |||| |||||||| ||| |||||||||  ||| ||| ||||||| ||| |    
T  5265320 tttaacgtcag-gactaaactgataacggaagtgcacattcaaaggctaatttgcatttaatcttgaatcagagaccattgtaacaacgaggtgcagaat 5265222  T
Q  136 caagaattaaagtgaccattt 156  Q
    |||||| |||| |||| ||||    
T  5265221 caagaactaaaatgactattt 5265201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 6468811 - 6468907
Alignment:
Q  65 aagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    ||||||| | |||||||||  ||||||||||||| |||||||| ||||| |||||||||||  || ||||||||  |  ||||||||||||| ||||    
T  6468811 aagtgcacattcagagactattttgtatttaatcatgagtcagggacctttgtgacagcgatatgcagagtcaaagaacaaagtgaccatttactca 6468907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 6752657 - 6752692
Alignment:
Q  31 aattatttaacgtcagagactaaagtgataacggaa 66  Q
    ||||||||||||||||||||||||||||||||||||    
T  6752657 aattatttaacgtcagagactaaagtgataacggaa 6752692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 31239967 - 31240036
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagactt 84  Q
    ||||| ||||||||||||| |||||||||| | ||| ||| ||||||||||| |||| | ||||||||||    
T  31239967 catcatcacttaacagaatcatttaacgtctgggacgaaaatgataacggaaatgcagagtcagagactt 31240036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 3778795 - 3778915
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    |||||||||||||| |||| || |||| |||||||| |  ||| |||| |||||||||||| ||||| |||| | | | ||||| ||||| ||| | |||    
T  3778795 tttaacgtcagagattaaactggtaacagaagtgcacatccagggactactttgtatttaagcctgattcagtggcatttgtgatagcgaagtgcaaagt 3778894  T
Q  136 caagaattaaagtgaccattt 156  Q
    || | || |||||||||||||    
T  3778895 cagggatcaaagtgaccattt 3778915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 357
Target Start/End: Original strand, 21809807 - 21809897
Alignment:
Q  267 ttaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||| ||||||| || ||||||| || ||||| |||||||||  ||   |||| |||||||||||||||  ||| ||||||||||||||||    
T  21809807 ttaagaaatctataaatagaattgttgtcttagaaatataaattgtcactttttatcaagtaataattacgttactttttaataaaaactt 21809897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 10008288 - 10008215
Alignment:
Q  284 agaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||| |||| |||||||||||||||  |||  |||| ||||||||||||||| |  | ||||||||||||||||    
T  10008288 agaaattttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaactt 10008215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 156
Target Start/End: Complemental strand, 24621187 - 24621080
Alignment:
Q  48 gactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaag 147  Q
    ||||||| |||||||||||| ||  | | ||||| |||||||||||||||| |||||||  ||||| | ||| | |||| || ||||| || ||||||||    
T  24621187 gactaaactgataacggaagcgcgcatttagagatttctttgtatttaatcatgagtcaaggacctttatgataacgagatgcagagt-aaaaattaaag 24621089  T
Q  148 tgaccattt 156  Q
    ||| |||||    
T  24621088 tgatcattt 24621080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 9e-40; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 7258418 - 7258271
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| ||||||||||||||| |||||||| | |||||||||| ||||||||||||||||||| || ||||||    
T  7258418 catcatcacttaacagatttttttaacgtcagggactaaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagttagggaccta 7258319  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    ||||||| ||||||||||||||| | |  |||||||| ||||||||||    
T  7258318 tgtgacaacgaggtgtagagtcagggaccaaagtgactatttgctcat 7258271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 8375039 - 8374935
Alignment:
Q  33 ttatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtag 132  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  8375039 ttatttaacgtcaaagactaaagtgataacggaagtgcaaaatcagaaacttttttgtatttaattctgagtcagagacctatgtgacagcgaggtgcag 8374940  T
Q  133 agtca 137  Q
    |||||    
T  8374939 agtca 8374935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 8048764 - 8048914
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||| ||||||||||||||| | ||| ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||     
T  8048764 catcatcacttaatagaattatttaacgttaaagattaaagtgataacggaagtgcagagtcggagacttctttgtatttaatcttgagtcagagacctt 8048863  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcataaa 165  Q
    |||| |||||||||| |||||||     ||||||||| |||||||||||||    
T  8048864 tgtgtcagcgaggtgcagagtcagagggtaaagtgactatttgctcataaa 8048914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 48788652 - 48788797
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||| ||||| | || |||||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||  |||||||| ||||||    
T  48788652 catcatcacctaacaaatttttttaacgtcagagactaaagtgataacggaagtgcagagtcagagacttatttatatttaattatgagtcagggaccta 48788751  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||||||||||||||| | ||||||| || |||||||| ||||||||    
T  48788752 tgtgacagcgaggtgcaaagtcaaggatcaaagtgactatttgctc 48788797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 10899053 - 10899175
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||| | |||||||||| |||||||||||||||| ||||  || |||    
T  10899053 catcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgggtcaaggatcta 10899152  T
Q  115 tgtgacagcgaggtgtagagtca 137  Q
    ||||||||||||||| |||||||    
T  10899153 tgtgacagcgaggtgcagagtca 10899175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 30924989 - 30925130
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||    
T  30924989 catcatcacttaacagattt-tttaacgtcagagactaaagtaataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaaggaccta 30925087  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttg 157  Q
    |||||| | ||| || ||| ||| | ||||||||||| |||||    
T  30925088 tgtgactgggagctgcagaatcagggattaaagtgactatttg 30925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 35727841 - 35727696
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| |||||||||||  | ||||||||||| |||||||||||||||||| ||||| | |||||||||| ||| |||||||||||||||||| ||||||    
T  35727841 catcatcacttaacagagatttttaacgtcag-gactaaagtgataacggatgtgcagagtcagagacttatttatatttaatcctgagtcagggaccta 35727743  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    ||||||||||||||| ||||||| | || ||||||||  ||||||||    
T  35727742 tgtgacagcgaggtgcagagtcagggatcaaagtgactgtttgctca 35727696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 12223679 - 12223825
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||||||||||||| |||| ||||||||| ||||||||| |||| | |||| ||||||||| |||||||||||||||||| ||||||    
T  12223679 catcatcacttaacagaattatttaacatcagtgactaaagtaataacggaactgcagagtcagggacttctttatatttaatcctgagtcagggaccta 12223778  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    |||||||  || ||| || |||| | | |||||||||||||| ||||    
T  12223779 tgtgacattgatgtgcagtgtcagggactaaagtgaccattttctca 12223825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 44333280 - 44333138
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||  |||||  ||||||||||||||||| | |||||||||| ||||||||||||| |||||||| ||||||    
T  44333280 catcatcacttaacagatttttttaacgtcaaggacta--gtgataacggaagtgcagagtcagagacttatttgtatttaatcatgagtcagggaccta 44333183  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgct 159  Q
    ||||||||||||||| ||||||| | |  |||||||| |||||||    
T  44333182 tgtgacagcgaggtgcagagtcagggaccaaagtgactatttgct 44333138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 48647424 - 48647568
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctat 115  Q
    |||| ||||||||||| || ||||||||||| |||||||||||||||  ||||||| | | |||||||| |||||||||||||||||||||| |||||||    
T  48647424 atcatcacttaacagatttttttaacgtcagggactaaagtgataacaaaagtgcagagtgagagacttatttgtatttaatcctgagtcagggacctat 48647523  T
Q  116 gtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||| |||||| |||||| ||| |   ||||||||| ||||||||    
T  48647524 gtgatagcgagctgtagaatcagggtctaaagtgactatttgctc 48647568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 7259664 - 7259775
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||| | | |||| ||||| ||||||||||||||||| ||||||||| |    
T  7259664 catcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgaatcagagaccca 7259763  T
Q  115 tgtgacagcgag 126  Q
    ||||||||||||    
T  7259764 tgtgacagcgag 7259775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 48646192 - 48646078
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||| | | || ||||||| |||||||||||||||||||||||||| | | |||| ||||| |||||||||||||||||||||| ||||||    
T  48646192 catcatcacttaatatatttttttaacgacagagactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgagtcagggaccta 48646093  T
Q  115 tgtgacagcgaggtg 129  Q
    |||||||||||||||    
T  48646092 tgtgacagcgaggtg 48646078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 42477523 - 42477400
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || ||||||||||| || |||| |||||||||||||||| | |||| ||||| |||||||||||||||||||||||||||||    
T  42477523 catcatcacttaacatatttttttaacgtcagggattaaaatgataacggaagtgcagagtcag-gacttatttgtatttaatcctgagtcagagaccta 42477425  T
Q  115 tgtgacagcgaggtgtagagtcaag 139  Q
    || |||| ||||||| |||||||||    
T  42477424 tgcgacaacgaggtgcagagtcaag 42477400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 8375568 - 8375670
Alignment:
Q  20 acacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtga 119  Q
    |||||||||| ||||||||||||||   ||||||| |||||||||||||||| | ||||| |||||||||||||||||| |||||||| |||||||||||    
T  8375568 acacttaacaaaattatttaacgtcgcggactaaattgataacggaagtgcagagtcagaaacttctttgtatttaatcatgagtcagggacctatgtga 8375667  T
Q  120 cag 122  Q
    |||    
T  8375668 cag 8375670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 13578301 - 13578414
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| | |||| ||||| |||||||||||| ||||||||| || ||     
T  13578301 catcatcacttaacataattatttaacgtcag-gactaaagtgataacggaagtgcagagtcagtgacttatttgtatttaattctgagtcagtgatctt 13578399  T
Q  115 tgtgacagcgaggtg 129  Q
    | |||||||||||||    
T  13578400 tatgacagcgaggtg 13578414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 33607619 - 33607701
Alignment:
Q  31 aattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacct 113  Q
    |||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  33607619 aattatttaacgtcagggtctaaaatgataacggaagtgcagaatcagagacttctttgtatttaatcctgaatcagagacct 33607701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 43457600 - 43457459
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||||| | |||||||||   ||||||||||||||||||||||| | || | ||||| |||||||||||||||||||||| ||||||    
T  43457600 catcatcacttaacagaataacttaacgtcatgaactaaagtgataacggaagtgcagagtcggggacttatttgtatttaatcctgagtcagggaccta 43457501  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
    || ||||||||| || ||| ||| | | ||||||||| ||||    
T  43457500 tgcgacagcgagctgcagaatcagggactaaagtgactattt 43457459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 44334430 - 44334576
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| | || ||||| ||||| |||||||||||||| ||||||||| | |||| ||||| ||| ||||||||| |||||||| ||||||    
T  44334430 catcatcacttaacatattt-tttaatgtcagggactaaagtgataatggaagtgcagagtcagggacttatttatatttaatcatgagtcagggaccta 44334528  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcat 162  Q
    ||| |||||||| || ||| ||| ||| ||||||||| ||||||||||    
T  44334529 tgtaacagcgagctgcagaatcaggaactaaagtgactatttgctcat 44334576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 7509457 - 7509567
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| |||||||||||||||| |  |||||| |||||||||||||| |||| ||||||||||| ||||||||| ||| ||| |||||| ||||||    
T  7509457 cacttaacaaaattatttaacgtcaggggttaaagtaataacggaagtgcagaatctgagacttctttatatttaatcatgaatcaaagacctttgtgac 7509556  T
Q  121 agcgaggtgta 131  Q
    | |||||||||    
T  7509557 aacgaggtgta 7509567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 35729066 - 35729211
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| |||||||| ||||| ||||| ||||||| |||||||||| | |||| ||||| ||||||| ||||||| |||||  ||||||    
T  35729066 catcatcacttaacagatttatttaatgtcagggactacagtgatagcggaagtgcagagtcagtgacttatttgtatgtaatcctaagtcaaggaccta 35729165  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||||||||||| || | | ||| | | ||||||||| ||||||||    
T  35729166 tgtgacagcgagctgcaaaatcagggaataaagtgactatttgctc 35729211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 157
Target Start/End: Complemental strand, 46286645 - 46286504
Alignment:
Q  16 atcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctat 115  Q
    |||| ||||||||| | || |||||||  ||||| |||||||||||| |||||||| | |||||||||| |||||||||||||||||||||| ||||| |    
T  46286645 atcatcacttaacatatttttttaacggtagagattaaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagtcagggaccttt 46286546  T
Q  116 gtgacagcgaggtgtagagtcaagaattaaagtgaccatttg 157  Q
     | |||||||| || ||||||| | | ||||||||| |||||    
T  46286545 ctaacagcgagatgaagagtcagggactaaagtgactatttg 46286504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 19433914 - 19434058
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| |||||||||||||||||||||| || |||||||||||||||| |||||||  | || | |||||| || ||||||||||| | ||||||||||     
T  19433914 catcatcacttaacagaattatttaacgccatagactaaagtgataactgaagtgcggagtcggtgacttccttatatttaatcctaaatcagagacctt 19434013  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgct 159  Q
    ||||||| |||| || ||||| | | | ||||||||| |||||||    
T  19434014 tgtgacaacgagatggagagttagggactaaagtgacaatttgct 19434058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 12220165 - 12220052
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||||| | |||||||| | |||||||||||||| ||||||||| ||||||||  | ||     
T  12220165 catcatcacttaacaaaattatttaacgtca-agactaaagtgatatcagaagtgcagagtcagagacttctttctatttaatcttgagtcaggaatctt 12220067  T
Q  115 tgtgacagcgaggtg 129  Q
    ||||||| |||||||    
T  12220066 tgtgacaacgaggtg 12220052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 5930113 - 5930258
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| |||||||||||||||||||| | ||| |||||||||||||||||||||||| | || || | ||  |||||||||||||||||| || |||||     
T  5930113 catcatcacttaacagaattatttaatggcagggactaaagtgataacggaagtgcacagtc-gaaaatttcttgtatttaatcctgagttagggacctt 5930211  T
Q  115 tgtgacagcgaggtgtagagtcaaga-attaaagtgaccatttgctca 161  Q
    ||||| ||||| ||| | ||| |||| | |||||||||||||||||||    
T  5930212 tgtgatagcgaagtgcaaagt-aagagactaaagtgaccatttgctca 5930258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 48777400 - 48777253
Alignment:
Q  15 catcaacacttaacagaattatttaa-cgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacct 113  Q
    ||||| ||||||||| | || ||||| |||||  |||||||||||||||||||||||| | |||| || || ||||||||||||| |||||||| ||| |    
T  48777400 catcatcacttaacatatttttttaaacgtcatggactaaagtgataacggaagtgcagagtcagggaattatttgtatttaatcatgagtcagggactt 48777301  T
Q  114 atgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    ||||||||||||| || ||| |||   | ||||||||| |||||||||    
T  48777300 atgtgacagcgagctgcagaatcagagactaaagtgactatttgctca 48777253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 45584476 - 45584566
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtc 105  Q
    ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||| | |||  | ||| ||||||||||||||||||||    
T  45584476 catcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcattggcttatttgtatttaatcctgagtc 45584566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 34888909 - 34889014
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| ||||||| |||||||  |||||||||||||||||||||||| | | |  ||| ||||| ||||||||| ||||| |||||||| ||||||    
T  34888909 cacttaacataattattaaacgtcaaggactaaagtgataacggaagtgcagagttaaggacatctttatatttaatcatgagtgagagacctttgtgac 34889008  T
Q  121 agcgag 126  Q
    ||||||    
T  34889009 agcgag 34889014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 6680513 - 6680605
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgta-tttaatcctgagtca 106  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||  ||| ||||||||| |||||| ||||||||    
T  6680513 catcagcacttaacagaattatttaacatcaaagactaaagtgataatagaagtgcataatcgaagatttctttgtattttaattctgagtca 6680605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 24288846 - 24288954
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| || ||||||||||||| ||||| |||||| ||||||||||| ||||||||| | |||  |||| ||||||| |||||||||||| ||||| ||     
T  24288846 catcatcagttaacagaattatataacgccagagaataaagtgataatggaagtgcacattcaaggactactttgtaattaatcctgagttagagatctt 24288945  T
Q  115 tgtgacagc 123  Q
    |||||||||    
T  24288946 tgtgacagc 24288954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 39708236 - 39708124
Alignment:
Q  25 taacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcg 124  Q
    ||||| ||||||||||| |||  |||||||||||||||||||||||| | || | |||||||||||||| |||| |||||||  ||||| |||||| |||    
T  39708236 taacataattatttaacatcacggactaaagtgataacggaagtgcaaagtcggtgacttctttgtattcaatcttgagtcatggacctttgtgacggcg 39708137  T
Q  125 aggtgtagagtca 137  Q
    ||||  |||||||    
T  39708136 aggtacagagtca 39708124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 44530597 - 44530681
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtc 105  Q
    ||||||||||||| | |||||| ||  |||||||||||||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  44530597 cacttaacagaataacttaacgccaatgactaaagtgataacggaagtgcagagtcagagacttatttatatttaatcctgagtc 44530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 8879532 - 8879615
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    |||||| |||||||||||||||| ||||||||||||||| ||| |||| | ||||  ||| |||||||||||||||||||||||    
T  8879532 ttaacaaaattatttaacgtcagggactaaagtgataacagaaatgcacattcaggaactactttgtatttaatcctgagtcag 8879615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 44529163 - 44529068
Alignment:
Q  23 cttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtg 118  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||   | || ||||||| ||||||||||||| |||||||| || |||||||    
T  44529163 cttaacaaaattatttaacgtcagggactaaagtgataacagaagtgttgagtcggagacttatttgtatttaatcatgagtcagggatctatgtg 44529068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 32793314 - 32793216
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacct 113  Q
    ||||| || |||||| |||||||||||| || |||||||||||||||| ||| |||| |||||  ||||| ||||||||||||||| ||| ||||||||    
T  32793314 catcatcagttaacataattatttaacgccaaagactaaagtgataaccgaaatgcagaatcaatgacttatttgtatttaatcctaagttagagacct 32793216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 33060953 - 33060899
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtg 69  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  33060953 catcatcatttaacagaattatttaacgtcagagactaaagtgataacggaagtg 33060899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 34705009 - 34704931
Alignment:
Q  58 ataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtc 136  Q
    |||||| |||| || | ||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  34705009 ataacgaaagtacacagtcagagacttctttgtatttaatcctgagtcagaggcctttgtgacaacgaggtgcagagtc 34704931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 43461704 - 43461789
Alignment:
Q  11 acatcatcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaat 97  Q
    ||||||||| ||||||  ||||| | ||||||||||||||||||||||||||||||||||||| ||| | |||| ||||||||||||    
T  43461704 acatcatcatcacttagtagaataacttaacgtcagagactaaagtgataacggaagtgcatagtca-aaacttatttgtatttaat 43461789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 45583792 - 45583682
Alignment:
Q  50 ctaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtg 149  Q
    |||||||||||||||||||||| ||||||  |||| | |||||||||| ||||||||| ||||||||||| |||||  || ||| ||| | | |||||||    
T  45583792 ctaaagtgataacggaagtgcagaatcaggaacttatctgtatttaattctgagtcagggacctatgtgatagcgaactgcagaatcagggactaaagtg 45583693  T
Q  150 accatttgctc 160  Q
    || ||||||||    
T  45583692 actatttgctc 45583682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 25621710 - 25621803
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgt 117  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||||| | ||| | |||  ||||||||||||||||| ||| | ||||||||    
T  25621710 ttaacaaaattatttaacgtcagtgactaaagtgataacagaagtgcacattcaaaaactaatttgtatttaatcctgaatcaaaaacctatgt 25621803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 27067909 - 27067812
Alignment:
Q  31 aattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtg 129  Q
    |||||||||| |||||||||||||||||||| | ||||||| | |||| |||| |||||  |||||||| |||||||||| || | |||||||||||||    
T  27067909 aattatttaatgtcagagactaaagtgataatgaaagtgcacattcagggactactttgcttttaatcc-gagtcagagatctttatgacagcgaggtg 27067812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 27210404 - 27210501
Alignment:
Q  31 aattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtg 129  Q
    |||||||||| |||||||||||||||||||| | ||||||| | |||| |||| |||||  |||||||| |||||||||| || | |||||||||||||    
T  27210404 aattatttaatgtcagagactaaagtgataatgaaagtgcacattcagggactactttgcttttaatcc-gagtcagagatctttatgacagcgaggtg 27210501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 24844695 - 24844594
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    ||||||||  ||||||||| |||||| ||||||||| | |||  |||| |||||||||||||||||||| |  |||||  |||||||||||||| |||||    
T  24844695 tttaacgtttgagactaaactgataatggaagtgcacattcaatgactactttgtatttaatcctgagttatggaccttggtgacagcgaggtgcagagt 24844596  T
Q  136 ca 137  Q
    ||    
T  24844595 ca 24844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 385619 - 385737
Alignment:
Q  43 tcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaat 142  Q
    |||| ||||||| ||||||  |||||||||| ||| | ||| ||||||||| |||| ||||| || ||||| ||||||| |||| || ||||||||| |     
T  385619 tcagggactaaactgataatagaagtgcatattcataaactactttgtattcaatcatgagttagggacctctgtgacaacgagatgcagagtcaaggac 385718  T
Q  143 taaagtgaccatttgctca 161  Q
     ||||||||||||| ||||    
T  385719 caaagtgaccatttactca 385737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 21062895 - 21062814
Alignment:
Q  80 gacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    ||||||| |||||||||||||||||||  ||||| | ||||||||||||| | ||||| | | |||||||||||||| ||||    
T  21062895 gacttctatgtatttaatcctgagtcaaggacctttatgacagcgaggtgcaaagtcagggactaaagtgaccattttctca 21062814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 10894449 - 10894385
Alignment:
Q  59 taacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagc 123  Q
    ||||||||||||| ||| |||||||| ||| ||||||||| |||||||| ||||||||| |||||    
T  10894449 taacggaagtgcagaattagagacttatttatatttaatcttgagtcagggacctatgtaacagc 10894385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 2677799 - 2677889
Alignment:
Q  48 gactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaa 138  Q
    ||||||| |||||||| ||||||| | | || || | |||||||||||||| ||||||| |||||| ||||||| ||||||  ||||||||    
T  2677799 gactaaactgataacgaaagtgcacatttagggaatactttgtatttaatcatgagtcatagacctttgtgacaacgaggtacagagtcaa 2677889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 34707735 - 34707697
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataac 62  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  34707735 ttaacaaaattatttaacgtcagagactaaagtgataac 34707697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 357
Target Start/End: Original strand, 8117451 - 8117535
Alignment:
Q  273 aatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||||| || |||||||| | |||| ||||||||||  ||| ||||| || || ||||||||| |||| ||||||||||||||||    
T  8117451 aatctataaatagaatttatgtcttgaaaatataaattgttattttttattaaataataattacattactttttaataaaaactt 8117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 24934876 - 24934837
Alignment:
Q  86 tttgtatttaatcctgagtcagagacctatgtgacagcga 125  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  24934876 tttgtatttaatcctaagtcagagacctttgtgacagcga 24934837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 362
Target Start/End: Original strand, 36636066 - 36636104
Alignment:
Q  324 aagtaataattatattattttttaataaaaacttgcttt 362  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  36636066 aagtaataattacattattttttaataaaaacttacttt 36636104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 357
Target Start/End: Complemental strand, 22035787 - 22035754
Alignment:
Q  324 aagtaataattatattattttttaataaaaactt 357  Q
    |||||||||||| |||||||||||||||||||||    
T  22035787 aagtaataattacattattttttaataaaaactt 22035754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 45907084 - 45907125
Alignment:
Q  316 ttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||| ||||||||||||||| |||| ||||||||||||||||    
T  45907084 tttttatcaagtaataattacattactttttaataaaaactt 45907125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 8046953 - 8046845
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    ||||||||| |||||||||| ||||  ||||||| || ||||| || || | | ||||| |||| ||| ||||||||||| | ||| | | || ||||||    
T  8046953 cacttaacataattatttaatgtcaatgactaaaatgttaacgcaaatgtagagtcagaaacttttttatatttaatcctaaatcaaaaaactttgtgac 8046854  T
Q  121 agcgaggtg 129  Q
    |||||||||    
T  8046853 agcgaggtg 8046845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 32898425 - 32898574
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||| | |||| ||||| ||||||||||||||| |||||| ||||||    
T  32898425 catcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctaagtcagggaccta 32898524  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcataa 164  Q
    |||||||| ||| || ||||||| | | ||||||||| ||||||||||||    
T  32898525 tgtgacagtgagttgcagagtcagggactaaagtgactatttgctcataa 32898574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 5965429 - 5965538
Alignment:
Q  22 acttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgaca 121  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||| ||| | |||||||    
T  5965429 acttaacataatcatttaacgtcagagactaaagtgataacggaagtgcagagtcaaagacttctttgtatttaatcctgagtcagggacatttgtgaca 5965528  T
Q  122 gcgaggtgta 131  Q
     |||||||||    
T  5965529 acgaggtgta 5965538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 35178785 - 35178929
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| |||| |    
T  35178785 catcatcacttaacagattt-tttaacgtcagggactaaagtgataacggaagtgcagaatcagggacttatttgtatttaatcctgagtcagggaccaa 35178883  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    | ||||||||| ||| ||||||| | |  |||||||| ||||||||    
T  35178884 tatgacagcgatgtgcagagtcagggaccaaagtgactatttgctc 35178929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 35177538 - 35177427
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| |  ||||||||||| |||||||||||||||||||||||| | |||| ||||| |||||||||||||| ||||||| ||||||    
T  35177538 catcatcacttaacagattattttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatccggagtcagggaccta 35177439  T
Q  115 tgtgacagcgag 126  Q
    ||||||||||||    
T  35177438 tgtgacagcgag 35177427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 1952950 - 1953090
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| || | ||| |||||| ||||||| ||||||| ||||||||| |||    
T  1952950 catcatcacttaacagatttatttaacgtcagagactaaagtgataacggaagtacagagtcatagacttatttgtatgtaatcct-agtcagagatcta 1953048  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
    | ||||| |||| || ||| ||| | | ||||||||| ||||    
T  1953049 tatgacaacgagctgcagaatcagggactaaagtgactattt 1953090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 5738003 - 5738144
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| |||||||||||||||||||||| || ||||| |||||||||||||||| || | |||   |||||||||||||||||| |||||||  ||||||    
T  5738003 catcatcacttaacagaattatttaacgccaaagactgaagtgataacggaagtacagagtcaataacttctttgtatttaatcttgagtcatggaccta 5738102  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
    ||| ||| |||  || | ||||| ||| ||||||||||||||    
T  5738103 tgtcacaacgatatgcaaagtcaggaactaaagtgaccattt 5738144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 31074137 - 31073996
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| || |||||| ||||||||||   ||||||||||||||||||| |||||||| | ||||| ||| ||||| ||||||||| ||||||||||| |     
T  31074137 catcatcagttaacaaaattatttaattccagagactaaagtgataacagaagtgcacattcagaaactactttgcatttaatccagagtcagagacttt 31074038  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccattt 156  Q
    ||||||||| || || ||||||| | |||||||| |||||||    
T  31074037 tgtgacagcaagatgcagagtcagggattaaagtaaccattt 31073996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 41754810 - 41754919
Alignment:
Q  50 ctaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtg 149  Q
    ||||||| |||||||||||| | | ||||  |||| ||||||||||||||||||||||||| |||||||||||||||||| ||| || || |||||||||    
T  41754810 ctaaagtaataacggaagtgtagagtcaggaacttgtttgtatttaatcctgagtcagagatctatgtgacagcgaggtgcagaatc-aggattaaagtg 41754908  T
Q  150 accatttgctc 160  Q
    || ||||||||    
T  41754909 actatttgctc 41754919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 5736985 - 5736840
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| ||||||||||||| || |||||||||||||||| ||||| | | | ||||| ||||||||||||||| |||| |||||||  ||    
T  5736985 catcatcacttaacaaaattatttaacgtgagggactaaagtgataacgaaagtgtagagttagagatttctttgtatttaattctgaatcagagattta 5736886  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||||||  ||| || | ||||   | |||||||||||||||||||    
T  5736885 tgtgacattgagatgcaaagtcggaacttaaagtgaccatttgctc 5736840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 30134709 - 30134564
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||| ||||| |||||| |||||| ||| | |||||||||||| |||||||| | ||| | |||||||||||||||||| |||||  | |||||     
T  30134709 catcatcacctaacataattatataacgttagatattaaagtgataacagaagtgcagagtcacacacttctttgtatttaatcatgagtaggggacctt 30134610  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    ||||||||||||||| ||||| ||| | ||||||||  ||||||||    
T  30134609 tgtgacagcgaggtgcagagttaaggactaaagtgattatttgctc 30134564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 8569530 - 8569410
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    ||||||||||| ||||||| |||||||| ||||||| | ||| | ||| |||||||||||||| ||||||| |||||| ||||| ||||||||| |||||    
T  8569530 tttaacgtcagggactaaactgataacgaaagtgcacattcataaactactttgtatttaatcatgagtcaaagacctttgtgagagcgaggtgaagagt 8569431  T
Q  136 caagaattaaagtgaccattt 156  Q
    |||  || ||||||| |||||    
T  8569430 caatgatcaaagtgatcattt 8569410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 28524901 - 28524810
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtca 106  Q
    ||||| || |||||| |||||||||||||||||||||||| |||||||||||||||| | |||  || | ||||||||||||||||||||||    
T  28524901 catcatcagttaacaaaattatttaacgtcagagactaaaatgataacggaagtgcacattcaaggattactttgtatttaatcctgagtca 28524810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 10407564 - 10407708
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||||| || |||||||||||  ||||||||||||||||||||||| | | |  ||||| ||||| ||||||||| |||||  ||||||    
T  10407564 catcatcacttaacagatttttttaacgtcaggaactaaagtgataacggaagtgcaaagttatggacttatttgtgtttaatcctaagtcaatgaccta 10407663  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgct 159  Q
    |||||||| ||| || ||| |||   | ||||||||| |||||||    
T  10407664 tgtgacagtgagctgcagaatcagagactaaagtgactatttgct 10407708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 28619132 - 28619028
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| |||||||||||| | |||||||||||||||||| ||||||| | |||  || |||||||||||||||| || ||||| |||||     
T  28619132 catcatcacttaacaaaattatttaacggccgagactaaagtgataacgaaagtgcagagtcaatgatttctttgtatttaatcatgggtcagggacctt 28619033  T
Q  115 tgtga 119  Q
    |||||    
T  28619032 tgtga 28619028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 24199066 - 24198959
Alignment:
Q  26 aacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcga 125  Q
    |||| ||||||| ||||  | ||||||||||||||||||||||||| | |||  || | |||||||||||||||||| ||| |||||| |||||||||||    
T  24199066 aacataattattcaacgaaaaagactaaagtgataacggaagtgcacattcaatgattactttgtatttaatcctgaatcaaagacctttgtgacagcga 24198967  T
Q  126 ggtgtaga 133  Q
    | ||||||    
T  24198966 gatgtaga 24198959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 45476305 - 45476218
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctga 102  Q
    ||||| ||||||||||| || |||||||  |||||||||||||||||| |||||||| | |||||||||| |||||||||||| ||||    
T  45476305 catcatcacttaacagatttttttaacgggagagactaaagtgataacagaagtgcagagtcagagacttatttgtatttaattctga 45476218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 28619536 - 28619617
Alignment:
Q  26 aacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    |||| |||||||||| ||||||||||||||||||||  |||||||| | |||  ||| ||||||||||||||||||||||||    
T  28619536 aacaaaattatttaatgtcagagactaaagtgataatagaagtgcagagtcaatgacctctttgtatttaatcctgagtcag 28619617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 28005470 - 28005364
Alignment:
Q  31 aattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgt 130  Q
    ||||||||||| || ||||||||||||||| |  ||| ||| | || | |||| |||||||||| |||||||||||| || || ||||||| ||||||||    
T  28005470 aattatttaacatcggagactaaagtgatatcataagagcacattcggggactactttgtatttgatcctgagtcagggatctttgtgacaacgaggtgt 28005371  T
Q  131 agagtca 137  Q
    |||||||    
T  28005370 agagtca 28005364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 28062773 - 28062667
Alignment:
Q  31 aattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgt 130  Q
    ||||||||||| || ||||||||||||||| |  ||| ||| | || | |||| |||||||||| |||||||||||| || || ||||||| ||||||||    
T  28062773 aattatttaacatcggagactaaagtgatatcataagagcacattcggggactactttgtatttgatcctgagtcagggatctttgtgacaacgaggtgt 28062674  T
Q  131 agagtca 137  Q
    |||||||    
T  28062673 agagtca 28062667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 9626457 - 9626581
Alignment:
Q  32 attatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgta 131  Q
    |||||||||||||||| |||||||| |||||||||| ||||| |||  |||| | ||||||||||| ||||||||  ||| | | ||||||||| |||||    
T  9626457 attatttaacgtcagaaactaaagtaataacggaagcgcatattcaatgactacattgtatttaattctgagtcaatgacatttatgacagcgaagtgta 9626556  T
Q  132 gagtcaagaattaaagtgaccattt 156  Q
     ||| | | |  |||||||||||||    
T  9626557 tagttagggaccaaagtgaccattt 9626581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 9625324 - 9625197
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagc 123  Q
    |||||| |||||||||||   | ||||||||||||||| ||||||||||| |||   ||| |||||| ||||||||| |||||| |  || ||||||| |    
T  9625324 ttaacataattatttaacactaaagactaaagtgataatggaagtgcatattcaagtactactttgtgtttaatcctaagtcagtggtctttgtgacaac 9625225  T
Q  124 gaggtgtagagtcaagaattaaagtgac 151  Q
    || ||||||||||||  || ||||||||    
T  9625224 gacgtgtagagtcaaagatcaaagtgac 9625197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 156
Target Start/End: Original strand, 12637757 - 12637879
Alignment:
Q  34 tatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtaga 133  Q
    ||||||| ||| | |||||||||||||||||||||||| | ||||  ||| ||||||||| |||||||||| || ||||| |||  || ||| ||||| |    
T  12637757 tatttaatgtcggggactaaagtgataacggaagtgcacattcaggaactactttgtattcaatcctgagttagggacctttgttgcaacgaagtgtata 12637856  T
Q  134 gtcaagaattaaagtgaccattt 156  Q
    |||||| |  || ||||||||||    
T  12637857 gtcaaggaccaaggtgaccattt 12637879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 31075286 - 31075391
Alignment:
Q  31 aattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgt 130  Q
    |||||||||||||||| ||||||||||||||||| ||| |||| |||| ||||  |||||||||||| ||||| ||   |||| ||| ||| |||||||     
T  31075286 aattatttaacgtcagtgactaaagtgataacgggagtacatattcag-gactattttgtatttaatgctgagccaagaacctttgtaacaacgaggtgc 31075384  T
Q  131 agagtca 137  Q
    |||||||    
T  31075385 agagtca 31075391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 33314995 - 33314890
Alignment:
Q  21 cacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgac 120  Q
    |||||||||||||| ||||||  ||   |||||||||||||| |||||  | ||||   ||||| ||||||||||||| |||||||||||||| || |||    
T  33314995 cacttaacagaattttttaacagca---actaaagtgataaccgaagtatagaatcgatgacttatttgtatttaatcttgagtcagagacctttgagac 33314899  T
Q  121 agcgaggtg 129  Q
    |||||||||    
T  33314898 agcgaggtg 33314890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 41121214 - 41121160
Alignment:
Q  53 aagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    |||||||||  |||||||||| |||||||||||||||||||||||| ||||||||    
T  41121214 aagtgataatagaagtgcatagtcagagacttctttgtatttaatcatgagtcag 41121160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 41754081 - 41753996
Alignment:
Q  75 tcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctc 160  Q
    |||| ||||| ||| |||||||||||||||||| ||||||||||||||| ||||| |||  || | | ||||||||| ||||||||    
T  41754081 tcagggacttgtttatatttaatcctgagtcagggacctatgtgacagcaaggtgcagaaccagggactaaagtgactatttgctc 41753996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 28006584 - 28006667
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    ||||||||||||||||||||||| |  |||||||||||||||||| || | |||  |||| |||| |||||||| |||| ||||    
T  28006584 ttaacagaattatttaacgtcaggggttaaagtgataacggaagtacacattcaaggactactttatatttaattctgattcag 28006667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 28063887 - 28063970
Alignment:
Q  24 ttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcag 107  Q
    ||||||||||||||||||||||| |  |||||||||||||||||| || | |||  |||| |||| |||||||| |||| ||||    
T  28063887 ttaacagaattatttaacgtcaggggttaaagtgataacggaagtacacattcaaggactactttatatttaattctgattcag 28063970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 384
Target Start/End: Original strand, 900283 - 900353
Alignment:
Q  315 tttttcatcaagtaataattatattattttttaataaaaacttgcttt-tttgatatttaaccaataccct 384  Q
    ||||| || ||||||||||||||||| |||||||||||||||| |||| |||| | |||||||||| ||||    
T  900283 ttttttattaagtaataattatattactttttaataaaaacttactttatttggtgtttaaccaatgccct 900353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 362
Target Start/End: Complemental strand, 20822005 - 20821907
Alignment:
Q  264 tgattaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaacttgcttt 362  Q
    ||||||| ||||||| |  ||||||| || |||||||||||||||  ||   |||| || |||||||||||| |||| |||||||||||||||| ||||    
T  20822005 tgattaagaaatctatagatagaattgttgtcttaaaaatataaattgtcactttttattaagtaataattacattactttttaataaaaacttacttt 20821907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 10405647 - 10405606
Alignment:
Q  93 ttaatcctgagtcagagacctatgtgacagcgaggtgtagag 134  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  10405647 ttaatcctgagtcagagacctatgcgacagcgaggtgcagag 10405606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 10406349 - 10406269
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtattta 95  Q
    ||||| ||||||||||| || ||||||  ||| ||||||||||||||  |||||||| | |||||||||| ||| ||||||    
T  10406349 catcatcacttaacagatttttttaacaccagggactaaagtgataatagaagtgcagagtcagagacttgtttttattta 10406269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 357
Target Start/End: Complemental strand, 29795611 - 29795527
Alignment:
Q  273 aatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||| |||| ||||||||||||||||||| ||||||  ||   |||| ||||| ||||||||| |||| ||||||| ||||||||    
T  29795611 aatccaaaaatagaatttttatcttaaaactataaactgtcactttttatcaattaataattacattactttttaacaaaaactt 29795527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 39065551 - 39065622
Alignment:
Q  283 tagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaa 354  Q
    |||||||| | |||||||||||||||  ||   |||| ||||||||||||| | ||||||||||||||||||    
T  39065551 tagaatttctgtcttaaaaatataaactgtcactttttatcaagtaataatgacattattttttaataaaaa 39065622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 43191005 - 43190938
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgag 103  Q
    ||||||||||||||||||| ||||||| || || ||||  ||||||||  ||||||||||||| ||||    
T  43191005 tttaacgtcagagactaaattgataacagatgtacatatacagagactattttgtatttaatcttgag 43190938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 45476543 - 45476612
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagactt 84  Q
    ||||| ||||||||| | || ||||||| ||||||||||||||||||  |||||||| | |||| |||||    
T  45476543 catcatcacttaacatatttttttaacgacagagactaaagtgataagagaagtgcagagtcagcgactt 45476612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 79216 - 79073
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||||| |||| ||||| | |||  ||||||||| ||||||||| |||||||  ||||||    
T  79216 catcatcacttaacaaaattatttaacgtcaaagactaaagtgatatcggaggtgcaaagtcaaggacttctttttatttaatcatgagtcaaggaccta 79117  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgc 158  Q
    ||||||||||||||| ||||||| ||| |||| |||| ||||||    
T  79116 tgtgacagcgaggtgcagagtcaggaactaaattgactatttgc 79073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 79663 - 79809
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||||||| | ||||||||||||||| |||||||| ||||||  ||| |||| | ||| |||||||||||||||||||| ||||||||  || ||    
T  79663 catcatcacttaataaaattatttaacgtcaaagactaaaatgataatagaaatgcagagtcaaagacttctttgtatttaatcatgagtcaggaactta 79762  T
Q  115 tgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctca 161  Q
    ||| ||| |||||||  |||||| | ||||||||||| |||||||||    
T  79763 tgtaacaacgaggtgccgagtcagggattaaagtgactatttgctca 79809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 74358 - 74415
Alignment:
Q  80 gacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtca 137  Q
    ||||||||||||||||||| ||||| || |||||||||||||| ||| || |||||||    
T  74358 gacttctttgtatttaatcatgagttagggacctatgtgacagtgagttgcagagtca 74415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 43 - 159
Target Start/End: Complemental strand, 116170 - 116054
Alignment:
Q  43 tcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaat 142  Q
    |||| |||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| |||||||||||||||||| || ||| | | |||     
T  116170 tcagggactaaagtgataacggaagtgcatagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgagctgcagaatgaggaac 116071  T
Q  143 taaagtgaccatttgct 159  Q
    ||||||||| |||||||    
T  116070 taaagtgactatttgct 116054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 5742 - 5628
Alignment:
Q  15 catcaacacttaacagaattatttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagaccta 114  Q
    ||||| ||| ||||| |||||||||||| |||||||||||||||||||||||||| | | |||| |||||||||||||||||| ||||||||||||| |     
T  5742 catcatcacataacataattatttaacgccagagactaaagtgataacggaagtgtagagtcagggacttctttgtatttaattctgagtcagagacatt 5643  T
Q  115 tgtgacagcgaggtg 129  Q
    ||| ||| |||||||    
T  5642 tgtcacaacgaggtg 5628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 1807 - 1688
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 135  Q
    ||||||| ||||||||||| ||||||| ||||||||   | || |||| ||||||||||| ||| |||| |||||| | ||||||||||||||   ||||    
T  1807 tttaacgccagagactaaactgataacagaagtgcacgtttag-gactactttgtatttattcccgagttagagacttttgtgacagcgaggttctgagt 1709  T
Q  136 caagaattaaagtgaccattt 156  Q
    |||| ||||||||||| ||||    
T  1708 caaggattaaagtgactattt 1688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 357
Target Start/End: Complemental strand, 38913 - 38823
Alignment:
Q  267 ttaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||| ||||||| || |||||||| ||||||  |||||||||  ||  ||||| ||||||||||||||| |||| ||||||||||||||||    
T  38913 ttaaaaaatctataaatagaatttatatcttggaaatataaactgtcattttttatcaagtaataattacattactttttaataaaaactt 38823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 9137 - 9201
Alignment:
Q  36 tttaacgtcagagactaaagtgataacggaagtgcataatcagagacttctttgtatttaatcct 100  Q
    ||||||||||||||||||| |||||||  ||||||| | |||||||||  |||||||||||||||    
T  9137 tttaacgtcagagactaaactgataacaaaagtgcaaattcagagactattttgtatttaatcct 9201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 16880 - 16921
Alignment:
Q  316 ttttcatcaagtaataattatattattttttaataaaaactt 357  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  16880 tttttatcaagtaataattatataattttttaataaaaactt 16921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 362
Target Start/End: Complemental strand, 52124 - 52029
Alignment:
Q  267 ttaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaacttgcttt 362  Q
    |||| ||||||| || ||||||| || ||||| |||||||||  ||  ||||| | ||| ||||||||| |||| |||||||||||||||| ||||    
T  52124 ttaagaaatctataaatagaattgttgtcttagaaatataaattgtcattttttaccaaataataattacattactttttaataaaaacttacttt 52029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 36573 - 36659
Alignment:
Q  85 ctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagtcaagaattaaagtgaccatttgctcataaatagaata 172  Q
    ||||||||||||||| |||| |||||||| ||||||| ||||||| || |||| | | ||||||||| |||| |||| ||||| ||||    
T  36573 ctttgtatttaatcccgagttagagacctttgtgaca-cgaggtgcagggtcagggactaaagtgacaatttactcaaaaataaaata 36659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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