View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19889_high_15 (Length: 300)
Name: NF19889_high_15
Description: NF19889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19889_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 16 - 293
Target Start/End: Complemental strand, 42640838 - 42640562
Alignment:
| Q |
16 |
ataaatagctacgtaatcattatcaattccagtcgaatccactacttgtattcgcaacacatacatagtatatgtttgcattgactaaactaatttacag |
115 |
Q |
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| T |
42640838 |
ataaatagctacgtaatcattatcaattccagtcgattccactacttgtattcgcaacacatacatagtatatgtttgcattgactaaactaatttacag |
42640739 |
T |
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| Q |
116 |
agattttgacctccgcaaattgatttgtaaggacacctaagttacccttgtcacaatttattttcaggggtttctaccaataaataaatcaaaacattta |
215 |
Q |
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|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |
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| T |
42640738 |
agattttgacctccacaaattgattcgtaaggacacctaagttacccttgtcacaatttattttcaggggtttctaccaataaat-aatcaaaacattca |
42640640 |
T |
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| Q |
216 |
agacattattaattccaaccgatcaacttgaatcacttaattgtacttgtatccgtaacagataatatatgtttggac |
293 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
42640639 |
agacattaataattccaaccgatcaacttgaatcacttaattgtacttgtatccgtaacagatcatatatgtttggac |
42640562 |
T |
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