View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19889_low_19 (Length: 280)
Name: NF19889_low_19
Description: NF19889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19889_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 19 - 273
Target Start/End: Original strand, 50525832 - 50526086
Alignment:
| Q |
19 |
ctcactatcttcttattttccttcttctgtcactcattatccattagatttatcaaccaagtcaacattctaattaacaccccacaggattcaatgtctt |
118 |
Q |
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| T |
50525832 |
ctcactatcttcttattttccttcttctgtcactcattatccattagatttatcaaccaagtcaacattctaattaacaccccacaggattcaatgtctt |
50525931 |
T |
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| Q |
119 |
tggtgaccccatcatatgttagtgagttattggagagaggcttcactttaaacactgttggaaacagactcttctattcagcacttccattgttgttgtg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50525932 |
tggtgaccccatcatatgttagtgagttattggagagaggcttcactttaaacactgttggaaacagactcttctattcagcacttccattgttgttgtg |
50526031 |
T |
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| Q |
219 |
gatctttggccctgttttggtcttcctttgttctctcaccatggttcctttgctt |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
50526032 |
gatctttggccctgttttggtcttcctttgttctctcactatggttcctttgctt |
50526086 |
T |
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