View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1988_high_5 (Length: 466)
Name: NF1988_high_5
Description: NF1988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1988_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 256 - 454
Target Start/End: Complemental strand, 43800159 - 43799961
Alignment:
| Q |
256 |
attttaggtttaatttcgttcggttcaagttgcaaccttggtattattgcagttgtttttcctttttatttctccacattatttaatcaattatgctaca |
355 |
Q |
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| T |
43800159 |
attttaagtttaatttcgttcggttcaagttgcaaccttggtattattgcagttgtttttcctttttatttctccacattatttaatcaattatgctaca |
43800060 |
T |
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| Q |
356 |
ctattatatttaatcgatccattgatgctaattgtttctattacagctgtggttaattagatacactactataatagttgaagttcatgtttagattga |
454 |
Q |
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| T |
43800059 |
ctattatatttaatcgatccattgatgctaattgtttctattacagctgtggttaattagatacactactataatagtttaagttcatgtttagattga |
43799961 |
T |
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