View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1988_low_34 (Length: 255)
Name: NF1988_low_34
Description: NF1988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1988_low_34 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 42701724 - 42701953
Alignment:
| Q |
17 |
gttataaccagcaagtgtttgtgttgtatgtatatcaggcagcgtagagtgtcgaacatgtcttttacctaaattctcagtgctacgtagattgtgagga |
116 |
Q |
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|||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42701724 |
gttataaccagcaagtgtttgtgtcgtgtgtatatcaggcagcgtagagtgtcgaacatgtcttttacctaaattctcagtgctacgtagattgtgagga |
42701823 |
T |
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| Q |
117 |
aagatgataaaattcatacccaaccctgtttgtaacgggtgaagaggtcttctgtttgagcattcttaaaagcactgcaagcaatgacataaacccatat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42701824 |
aagatgataaaattcatacccaaccctgtttgtaacgggtgaagaggtcttctgtttgagcattcttaaaagcactgcaagcaatgacataaacccatat |
42701923 |
T |
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| Q |
217 |
aagaacaactacagcaacgatgagaataat |
246 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
42701924 |
aagaacaactacagcaacgatgagaataat |
42701953 |
T |
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