View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19891_high_11 (Length: 318)
Name: NF19891_high_11
Description: NF19891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19891_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 5e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 16 - 248
Target Start/End: Original strand, 21234584 - 21234822
Alignment:
| Q |
16 |
tatctaataaagggcaaaatacaagggaaaatatat--gagatcgaagtaagtataataatcatttaata----caccacacaaaagcaataatatattc |
109 |
Q |
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| T |
21234584 |
tatctaataaagggcaaaatacaagggaaaatatatatgagatcgaagtaagtatactaatcaattaataaatacatcacacaaaagcaataatatatcc |
21234683 |
T |
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| Q |
110 |
tcgagtcaatcatatgatacatcttcaataaattgtctctcaagtcattcatatccatctgatgcatcctgaccaacaagttgacaataacatttgacaa |
209 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
21234684 |
tcgagtcaatcatatgatacaccttcaataaattgtctctcaagtcattcatattcatctgatgcatcctgaccaacaagttgaaaataacatttgacaa |
21234783 |
T |
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| Q |
210 |
tcttgatgtcacaaacactctcactaatggcatgcacga |
248 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
21234784 |
tcttgatgtcacaaacactctcactaatggcatgcacga |
21234822 |
T |
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