View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19891_low_9 (Length: 341)
Name: NF19891_low_9
Description: NF19891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19891_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 16 - 327
Target Start/End: Complemental strand, 35628803 - 35628492
Alignment:
| Q |
16 |
atctaaatgtctatagtttccaatttttatgaaaggagtttgtggttatgtaatttgatgtgaatgaccttgaatgaataaatacttactcttggtcatt |
115 |
Q |
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| T |
35628803 |
atctaaatttctatagtttccaatttttattaaaggagtttgtggttatgtaatttgatgtgaatgaccttaaatgaataaatacttactcttggtcatt |
35628704 |
T |
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| Q |
116 |
gaataatctgtcacatatgtgaatattttcttttagctctaaccccagttgaatggtttcaatatgtaatttcctcaacagcccaaatgagaaagagaca |
215 |
Q |
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| T |
35628703 |
gaataatctgtcacatatgtgaatactttcttttagctctaaccccagttgaatggtttcaatatgtaatttcctcagcagcccaaatgagaaagagaca |
35628604 |
T |
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| Q |
216 |
ggattgaaattttgaaataaatacaaagaattcaacgttgcccttgaaagaagaaaaagattgccaaacttagaattataaagtaaaacaatgaatgtcc |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
35628603 |
agattgaaattttgaaataaatacaaagaattcaacgttgcccttgaaagaagaaaaagattgccaaacttagaattataaagtaaaacaatgaatatcc |
35628504 |
T |
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| Q |
316 |
aaaggattattc |
327 |
Q |
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|||||||||||| |
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| T |
35628503 |
aaaggattattc |
35628492 |
T |
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