View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19894_high_3 (Length: 300)
Name: NF19894_high_3
Description: NF19894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19894_high_3 |
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Alignment Details
Target: chr6 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 17 - 285
Target Start/End: Complemental strand, 35094592 - 35094324
Alignment:
| Q |
17 |
aataataatcaaaagaaaggatcatcatcaaataataatacagacgagggttcggtaagatcacgcgcaagcagtaataccagtagcagaaaaggagata |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
35094592 |
aataataatcaaaagaaaggatcatcatcaaataataatacagacgagggttcggtaagatcacgcacaagcagtaataccagtagcagaaaaggagata |
35094493 |
T |
|
| Q |
117 |
gcaagttgtcctttgtgagggaagaagtatcagcacaatttgatttgcaagatcttttgagagccgctgctgagatattaggaagtggttgtcacagttc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35094492 |
gcaagttgtcctttgtgagggaagaagtatcagcacaatttgatttgcaagatcttttgagagccgctgctgagatattaggaagtggttgtcacagttc |
35094393 |
T |
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| Q |
217 |
atcctataaggctgctttgttgactggccctactgttgtcgtcaaaagatacaaacaaatgaacaatgt |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35094392 |
atcctataaggctgctttgttgactggccctactgttgtcgtcaaaagatacaaacaaatgaacaatgt |
35094324 |
T |
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