View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19895_high_6 (Length: 453)
Name: NF19895_high_6
Description: NF19895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19895_high_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 409; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 1 - 453
Target Start/End: Original strand, 14515000 - 14515452
Alignment:
| Q |
1 |
ataccgttcatccaacttcatcttacttcacctctaattgtttgacaacctcctatattggacaaaagatacaaagcttcaaaactcttttcagaacttg |
100 |
Q |
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| T |
14515000 |
ataccgttcatccaacttcatcttacttcacctctaattgtttgacgacctcttatattggacaaaagatacaaagcttcaaaactcttttcagaacttg |
14515099 |
T |
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| Q |
101 |
aagcctccaaataatgttcaatgtatcatcatgtcaacttagcaacgtaaatgcacttgcagctgtaaatgtatcaactctataactaggccacaaattc |
200 |
Q |
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| T |
14515100 |
aagcctccaaataatgttcaatgtatcatcatgtcaacttaacaacgtaaatgcacttgcagctgtaaatgtatcaactctataactaggccacaaattc |
14515199 |
T |
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| Q |
201 |
aaatcatctcccaactcatgatgaggtggcataatatagagtgaatattctttttgatatcccttggtaaacaatccaaaaactgccaatctcaatcacc |
300 |
Q |
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| T |
14515200 |
aaatcatctcccaactcatgatgaggtggcataatatagagtgaatattctttttgatatcccttggtaaacaatccaaaaactgccaatctcaatcacc |
14515299 |
T |
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| Q |
301 |
ggtaatatatattaactcctactgtcaaatgcaccagattcgcgggaatttcttcgacaaaatcttcaatttttaataaatcaaatgcatccttagaaaa |
400 |
Q |
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| T |
14515300 |
ggtaatatatattaactactactgtcaaatgcaccagattcgcaggaatttcttcgacaaaattttcaatttttaacaaatcaaatgcatccttagagaa |
14515399 |
T |
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| Q |
401 |
attcaatccgactttgactaacatctttcaaggatcggaaccctgagctattt |
453 |
Q |
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| T |
14515400 |
attcaacccgactttgactaacgtctttcaaagatcggaaccctgagctattt |
14515452 |
T |
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