View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19895_low_18 (Length: 280)
Name: NF19895_low_18
Description: NF19895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19895_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 11477263 - 11477013
Alignment:
| Q |
18 |
gttcttaccacttttcagtgctgccatgatgataatgttgaggaggattttttcgttagtagcgttactcctcctaatactaattaattgatcttttgnn |
117 |
Q |
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| T |
11477263 |
gttcttaccacttttcagtgctgccatgatgataatgttgaggaggattttttcgttagtagcgttactcctcctaatactaattaattgatcttttgtt |
11477164 |
T |
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| Q |
118 |
nnnnncattatggctctatgcagttgattgcatagccttcaatgtttgtttctttgttttattttaatcatgaatcaatgtaataaactatccaagggtc |
217 |
Q |
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| T |
11477163 |
tttttcattatggctctatgcagttgattgcatagccttcaatgtttgtttctttgttttattttaatcatgaatcaatgtaataaactatccaagggtc |
11477064 |
T |
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| Q |
218 |
ttgttgtataaactggagaacattgaatgatcaataaaatttgttcatatt |
268 |
Q |
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| T |
11477063 |
ttgttgtataaactggagaacattgaatgatcaataaaatttgttcatatt |
11477013 |
T |
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